AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029293.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029293.01.T01 MTR_5g083890 85.955 178 23 2 112 288 215 391 4.47e-103 310
MsG0580029293.01.T01 MTR_5g083890 87.681 138 17 0 1 138 1 138 1.15e-71 229
MsG0580029293.01.T01 MTR_3g099830 45.730 363 128 6 6 299 12 374 4.29e-91 275
MsG0580029293.01.T01 MTR_7g075820 74.854 171 37 2 129 299 230 394 2.41e-81 251
MsG0580029293.01.T01 MTR_7g075820 59.231 130 49 1 1 130 1 126 5.82e-39 141
MsG0580029293.01.T01 MTR_1g107385 70.440 159 46 1 141 299 266 423 9.34e-73 230
MsG0580029293.01.T01 MTR_1g107385 58.621 116 47 1 5 120 31 145 6.13e-35 131
MsG0580029293.01.T01 MTR_7g007340 41.880 351 129 11 6 293 13 351 2.90e-66 212
MsG0580029293.01.T01 MTR_2g005990 58.434 166 67 2 136 299 230 395 1.89e-56 187
MsG0580029293.01.T01 MTR_2g005990 38.813 219 107 7 6 210 6 211 3.41e-31 120
MsG0580029293.01.T01 MTR_2g007090 40.864 301 155 6 6 299 10 294 6.30e-53 175
MsG0580029293.01.T01 MTR_7g034090 41.358 324 141 12 5 296 3 309 1.10e-52 178
MsG0580029293.01.T01 MTR_2g007550 39.701 335 146 12 6 298 14 334 8.39e-52 174
MsG0580029293.01.T01 MTR_2g007400 53.939 165 74 2 136 298 238 402 2.78e-51 174
MsG0580029293.01.T01 MTR_2g007400 54.622 119 52 1 6 124 12 128 7.44e-31 119
MsG0580029293.01.T01 MTR_2g008320 53.333 165 68 4 136 298 269 426 1.91e-46 162
MsG0580029293.01.T01 MTR_2g008320 45.217 115 60 1 6 117 52 166 8.40e-25 103
MsG0580029293.01.T01 MTR_2g007360 49.133 173 80 4 135 299 202 374 2.53e-45 157
MsG0580029293.01.T01 MTR_2g007360 51.786 112 54 0 6 117 12 123 1.05e-27 110
MsG0580029293.01.T01 MTR_6g029350 53.125 160 66 4 142 298 44 197 3.78e-45 153
MsG0580029293.01.T01 MTR_2g008310 50.000 164 73 2 136 298 215 370 3.28e-43 152
MsG0580029293.01.T01 MTR_2g008310 38.889 198 103 5 6 201 2 183 1.92e-28 113
MsG0580029293.01.T01 MTR_2g007530 37.427 342 143 12 5 298 18 336 7.70e-43 150
MsG0580029293.01.T01 MTR_2g007450 51.128 133 60 2 167 299 293 420 1.08e-35 133
MsG0580029293.01.T01 MTR_2g007450 51.938 129 58 2 6 134 16 140 2.63e-33 126
MsG0580029293.01.T01 MTR_3g107100 46.409 181 72 6 136 298 224 397 3.53e-35 131
MsG0580029293.01.T01 MTR_3g107100 35.500 200 113 6 5 202 10 195 2.30e-24 102
MsG0580029293.01.T01 MTR_7g007370 47.134 157 73 2 136 292 184 330 2.18e-33 125
MsG0580029293.01.T01 MTR_7g007370 49.383 81 31 1 1 81 12 82 5.37e-13 68.9
MsG0580029293.01.T01 MTR_7g032380 29.589 365 169 11 3 297 8 354 5.63e-31 119
MsG0580029293.01.T01 MTR_1g053025 43.558 163 78 4 145 299 233 389 2.78e-30 118
MsG0580029293.01.T01 MTR_1g053025 37.611 226 131 6 6 228 2 220 1.31e-26 108
MsG0580029293.01.T01 MTR_7g033915 29.380 371 171 13 3 297 8 363 3.56e-30 117
MsG0580029293.01.T01 MTR_8g085430 33.007 306 155 11 1 271 6 296 6.07e-30 115
MsG0580029293.01.T01 MTR_3g107120 44.025 159 77 5 142 296 238 388 1.78e-29 115
MsG0580029293.01.T01 MTR_3g107120 38.636 132 62 4 6 125 9 133 3.82e-14 72.4
MsG0580029293.01.T01 MTR_7g083740 48.252 143 68 4 157 296 225 364 2.46e-29 115
MsG0580029293.01.T01 MTR_7g083740 34.653 202 91 7 3 201 14 177 4.90e-22 95.1
MsG0580029293.01.T01 MTR_5g073420 30.971 381 159 16 6 296 11 377 2.50e-27 109
MsG0580029293.01.T01 MTR_7g007080 43.636 165 81 7 139 299 223 379 1.42e-26 107
MsG0580029293.01.T01 MTR_7g007080 36.029 136 81 4 5 138 3 134 1.47e-15 76.6
MsG0580029293.01.T01 MTR_3g107160 42.236 161 81 5 142 298 230 382 2.08e-26 107
MsG0580029293.01.T01 MTR_3g107160 35.897 195 110 8 6 197 10 192 2.88e-23 98.6
MsG0580029293.01.T01 MTR_5g058000 30.607 379 163 14 6 297 8 373 2.75e-26 107
MsG0580029293.01.T01 MTR_2g007500 38.071 197 96 3 6 200 14 186 4.14e-26 105
MsG0580029293.01.T01 MTR_2g007610 45.139 144 73 3 156 298 12 150 7.77e-26 101
MsG0580029293.01.T01 MTR_3g026920 38.542 192 95 6 119 298 224 404 7.51e-25 103
MsG0580029293.01.T01 MTR_3g026920 46.400 125 64 2 6 128 19 142 7.93e-24 100
MsG0580029293.01.T01 MTR_7g075800 40.816 147 75 4 133 267 245 391 1.42e-24 103
MsG0580029293.01.T01 MTR_4g098590 47.500 120 59 2 8 127 1 116 1.87e-24 101
MsG0580029293.01.T01 MTR_4g098590 42.361 144 76 3 142 283 228 366 9.10e-20 88.6
MsG0580029293.01.T01 MTR_7g098480 29.897 388 162 13 6 299 18 389 1.87e-24 102
MsG0580029293.01.T01 MTR_5g073370 27.532 385 177 16 6 298 5 379 4.19e-23 98.2
MsG0580029293.01.T01 MTR_2g007460 43.802 121 47 3 6 126 12 111 1.43e-22 90.5
MsG0580029293.01.T01 MTR_1g041245 34.426 183 103 4 126 297 208 384 4.85e-22 95.1
MsG0580029293.01.T01 MTR_1g041245 54.795 73 30 1 3 75 8 77 3.54e-14 72.8
MsG0580029293.01.T01 MTR_7g034115 29.539 369 161 13 3 284 8 364 1.16e-21 94.4
MsG0580029293.01.T01 MTR_5g082930 51.724 87 40 1 8 92 17 103 1.61e-21 90.5
MsG0580029293.01.T01 MTR_3g106960 41.026 156 78 7 142 291 43 190 7.60e-21 89.4
MsG0580029293.01.T01 MTR_7g081290 29.368 269 135 6 6 274 18 231 8.56e-21 89.7
MsG0580029293.01.T01 MTR_6g040270 36.686 169 82 5 143 298 224 380 2.23e-20 90.5
MsG0580029293.01.T01 MTR_6g040270 36.434 129 72 3 8 133 10 131 5.41e-12 66.2
MsG0580029293.01.T01 MTR_5g061680 31.967 244 133 10 6 244 11 226 2.32e-19 87.0
MsG0580029293.01.T01 MTR_7g056280 38.346 133 75 4 168 296 441 570 6.62e-18 84.3
MsG0580029293.01.T01 MTR_7g056280 33.140 172 108 4 1 172 1 165 1.87e-15 77.0
MsG0580029293.01.T01 MTR_1g053050 46.341 82 42 1 218 299 36 115 1.14e-16 75.1
MsG0580029293.01.T01 MTR_7g026500 31.373 204 121 5 3 199 11 202 1.24e-16 79.7
MsG0580029293.01.T01 MTR_7g026500 30.994 171 91 6 143 296 232 392 2.70e-13 70.1
MsG0580029293.01.T01 MTR_1g085120 32.512 203 119 7 5 205 91 277 1.55e-16 80.1
MsG0580029293.01.T01 MTR_1g085120 37.278 169 81 8 143 297 312 469 7.06e-14 72.0
MsG0580029293.01.T01 MTR_6g011460 30.841 214 132 7 6 217 46 245 1.76e-16 79.7
MsG0580029293.01.T01 MTR_1g085120 32.512 203 119 7 5 205 166 352 2.02e-16 79.7
MsG0580029293.01.T01 MTR_1g085120 37.278 169 81 8 143 297 387 544 7.24e-14 72.0
MsG0580029293.01.T01 MTR_1g085120 32.512 203 119 7 5 205 178 364 2.44e-16 79.3
MsG0580029293.01.T01 MTR_1089s0010 35.119 168 84 7 143 297 222 377 2.60e-16 79.0
MsG0580029293.01.T01 MTR_1089s0010 30.415 217 128 9 6 217 8 206 8.24e-15 74.3
MsG0580029293.01.T01 MTR_3g095600 27.576 330 151 12 6 289 4 291 2.77e-16 77.8
MsG0580029293.01.T01 MTR_3g094980 41.818 110 54 4 179 286 30 131 3.17e-16 75.5
MsG0580029293.01.T01 MTR_7g055943 33.000 200 114 8 6 202 40 222 3.68e-16 78.6
MsG0580029293.01.T01 MTR_7g055943 32.749 171 90 7 143 297 258 419 2.11e-14 73.6
MsG0580029293.01.T01 MTR_5g007410 32.370 173 88 6 143 296 243 405 4.87e-16 78.6
MsG0580029293.01.T01 MTR_2g082800 40.323 124 61 4 5 126 26 138 7.30e-16 77.8
MsG0580029293.01.T01 MTR_5g058100 40.984 122 65 2 6 127 9 123 9.35e-16 77.4
MsG0580029293.01.T01 MTR_5g058100 33.333 171 85 6 143 297 225 382 1.67e-14 73.6
MsG0580029293.01.T01 MTR_6g022500 32.287 223 133 8 6 226 101 307 9.42e-16 77.8
MsG0580029293.01.T01 MTR_6g022500 33.803 142 72 6 168 298 345 475 4.44e-11 63.5
MsG0580029293.01.T01 MTR_6g044560 37.121 132 79 3 6 133 178 309 1.32e-15 77.4
MsG0580029293.01.T01 MTR_6g044560 35.915 142 70 5 168 297 430 562 6.63e-11 63.2
MsG0580029293.01.T01 MTR_7g034120 30.857 175 102 4 129 297 145 306 1.34e-15 76.3
MsG0580029293.01.T01 MTR_6g044572 37.879 132 78 3 6 133 2 133 1.60e-15 76.6
MsG0580029293.01.T01 MTR_6g044572 35.915 142 70 5 168 297 254 386 2.76e-11 63.9
MsG0580029293.01.T01 MTR_1377s0010 35.075 134 71 3 143 271 5 127 1.85e-15 72.4
MsG0580029293.01.T01 MTR_1g066830 33.333 177 81 8 143 297 224 385 1.90e-15 76.3
MsG0580029293.01.T01 MTR_1g066830 29.381 194 120 6 6 197 8 186 2.64e-13 70.1
MsG0580029293.01.T01 MTR_7g032370 31.658 199 102 7 112 297 173 350 2.02e-15 75.9
MsG0580029293.01.T01 MTR_3g036250 36.957 138 71 5 167 296 234 363 2.15e-15 75.9
MsG0580029293.01.T01 MTR_6g045333 31.609 174 92 5 143 297 279 444 2.84e-15 76.3
MsG0580029293.01.T01 MTR_7g033470 50.000 90 41 3 6 93 14 101 2.99e-15 72.0
MsG0580029293.01.T01 MTR_5g054920 34.783 161 75 6 125 271 33 177 4.22e-15 72.8
MsG0580029293.01.T01 MTR_2g007100 75.610 41 10 0 6 46 2 42 4.67e-15 69.3
MsG0580029293.01.T01 MTR_7g098570 34.545 165 86 6 144 295 234 389 5.69e-15 75.5
MsG0580029293.01.T01 MTR_4g039440 35.057 174 81 8 143 297 250 410 6.46e-15 75.1
MsG0580029293.01.T01 MTR_4g039440 29.646 226 126 9 1 212 20 226 1.57e-12 67.8
MsG0580029293.01.T01 MTR_3g105060 40.833 120 61 3 3 122 11 120 6.69e-15 74.7
MsG0580029293.01.T01 MTR_6g022520 35.882 170 80 6 146 297 153 311 1.21e-14 73.6
MsG0580029293.01.T01 MTR_5g008920 36.196 163 83 7 145 296 226 378 1.34e-14 73.9
MsG0580029293.01.T01 MTR_1g108820 52.000 75 36 0 2 76 4 78 1.89e-14 73.2
MsG0580029293.01.T01 MTR_7g033990 31.500 200 119 5 6 201 11 196 2.29e-14 73.2
MsG0580029293.01.T01 MTR_7g033990 30.818 159 88 5 143 291 229 375 8.51e-12 65.5
MsG0580029293.01.T01 MTR_1g108820 52.000 75 36 0 2 76 4 78 2.58e-14 73.2
MsG0580029293.01.T01 MTR_1g108820 29.609 179 94 6 138 298 221 385 4.54e-13 69.3
MsG0580029293.01.T01 MTR_7g033945 51.351 74 33 1 3 76 8 78 2.81e-14 70.1
MsG0580029293.01.T01 MTR_3g467400 41.071 112 58 2 6 117 3 106 3.73e-14 72.4
MsG0580029293.01.T01 MTR_7g056447 52.703 74 32 1 3 76 6 76 4.75e-14 71.6
MsG0580029293.01.T01 MTR_7g115270 36.029 136 76 3 3 138 9 133 6.11e-14 72.0
MsG0580029293.01.T01 MTR_7g056430 39.837 123 63 3 5 127 8 119 7.48e-14 72.4
MsG0580029293.01.T01 MTR_5g045170 31.818 176 88 7 143 298 227 390 7.83e-14 71.6
MsG0580029293.01.T01 MTR_5g045170 32.124 193 113 8 8 197 16 193 1.07e-11 65.1
MsG0580029293.01.T01 MTR_7g056420 39.837 123 63 3 5 127 8 119 7.90e-14 72.4
MsG0580029293.01.T01 MTR_3g023630 33.663 202 113 9 6 204 8 191 9.76e-14 71.2
MsG0580029293.01.T01 MTR_6g022390 36.296 135 69 6 6 130 5 132 1.10e-13 67.8
MsG0580029293.01.T01 MTR_1g095750 52.778 72 28 1 3 74 43 108 1.75e-13 67.0
MsG0580029293.01.T01 MTR_2g072530 35.433 127 69 2 1 124 8 124 1.76e-13 70.9
MsG0580029293.01.T01 MTR_7g056433 33.571 140 73 4 168 296 256 386 2.08e-13 70.5
MsG0580029293.01.T01 MTR_7g056433 30.556 216 129 8 2 212 8 207 1.53e-12 67.8
MsG0580029293.01.T01 MTR_3g040700 38.017 121 64 3 6 126 43 152 3.33e-13 70.1
MsG0580029293.01.T01 MTR_2g082850 33.898 177 99 7 5 179 21 181 3.37e-13 69.7
MsG0580029293.01.T01 MTR_5g008950 35.971 139 70 5 169 296 232 362 3.69e-13 69.7
MsG0580029293.01.T01 MTR_1g108800 33.133 166 86 6 142 298 192 341 5.63e-13 68.9
MsG0580029293.01.T01 MTR_7g098510 30.899 178 98 6 135 296 220 388 7.69e-13 68.6
MsG0580029293.01.T01 MTR_7g098510 43.200 125 52 5 6 127 18 126 3.39e-12 66.6
MsG0580029293.01.T01 MTR_2g036470 31.844 179 97 7 136 298 226 395 1.75e-12 67.8
MsG0580029293.01.T01 MTR_2g036470 26.522 230 143 6 6 227 14 225 7.38e-11 62.8
MsG0580029293.01.T01 MTR_3g023270 32.544 169 99 4 5 171 11 166 2.67e-12 67.0
MsG0580029293.01.T01 MTR_7g056277 29.609 179 100 7 129 296 462 625 3.15e-12 67.4
MsG0580029293.01.T01 MTR_7g056277 28.251 223 131 8 2 215 255 457 6.49e-11 63.2
MsG0580029293.01.T01 MTR_7g034110 48.000 75 36 1 3 77 8 79 3.92e-12 66.2
MsG0580029293.01.T01 MTR_2g082880 36.220 127 61 4 5 126 9 120 4.22e-12 66.6
MsG0580029293.01.T01 MTR_5g087940 48.684 76 32 2 5 78 25 95 5.06e-12 66.2
MsG0580029293.01.T01 MTR_2g082860 50.746 67 32 1 5 71 26 91 5.17e-12 62.4
MsG0580029293.01.T01 MTR_7g114710 37.903 124 63 3 3 124 10 121 5.19e-12 66.2
MsG0580029293.01.T01 MTR_1g492880 51.316 76 36 1 1 76 1 75 5.84e-12 61.6
MsG0580029293.01.T01 MTR_1g492880 41.121 107 58 3 1 107 1 102 6.48e-12 61.6
MsG0580029293.01.T01 MTR_3g082890 50.704 71 29 1 6 76 97 161 9.43e-12 65.5
MsG0580029293.01.T01 MTR_3g095640 36.975 119 69 4 6 122 18 132 1.03e-11 62.8
MsG0580029293.01.T01 MTR_3g082890 50.704 71 29 1 6 76 17 81 1.25e-11 65.1
MsG0580029293.01.T01 MTR_3g087260 34.161 161 84 5 149 296 303 454 1.30e-11 65.1
MsG0580029293.01.T01 MTR_2g099980 29.560 159 95 3 5 163 37 178 1.46e-11 65.1
MsG0580029293.01.T01 MTR_3g114200 63.830 47 17 0 6 52 19 65 1.47e-11 62.0
MsG0580029293.01.T01 MTR_7g033940 50.725 69 31 1 8 76 96 161 1.76e-11 63.2
MsG0580029293.01.T01 MTR_7g056287 30.168 179 99 8 129 296 206 369 1.90e-11 64.3
MsG0580029293.01.T01 MTR_7g056287 28.182 220 129 8 5 215 2 201 5.69e-11 63.2
MsG0580029293.01.T01 MTR_3g108560 30.392 204 105 7 5 200 19 193 1.96e-11 64.3
MsG0580029293.01.T01 MTR_0543s0010 36.429 140 66 7 171 296 317 447 2.22e-11 64.3
MsG0580029293.01.T01 MTR_0543s0010 30.846 201 112 9 3 200 83 259 9.51e-11 62.4
MsG0580029293.01.T01 MTR_4g024770 53.061 49 23 0 2 50 20 68 2.38e-11 59.3
MsG0580029293.01.T01 MTR_3g108560 30.392 204 105 7 5 200 19 193 2.74e-11 63.5
MsG0580029293.01.T01 MTR_7g098590 50.704 71 32 1 6 76 18 85 3.01e-11 60.5
MsG0580029293.01.T01 MTR_8g467800 31.667 120 75 1 5 124 19 131 3.40e-11 63.5
MsG0580029293.01.T01 MTR_8g445780 62.500 48 18 0 5 52 12 59 4.00e-11 63.5
MsG0580029293.01.T01 MTR_3g006580 35.766 137 61 5 8 144 35 144 4.31e-11 63.5
MsG0580029293.01.T01 MTR_8g467800 31.667 120 75 1 5 124 19 131 5.03e-11 63.5
MsG0580029293.01.T01 MTR_7g088260 33.143 175 86 9 142 296 296 459 6.97e-11 63.2
MsG0580029293.01.T01 MTR_2g020170 39.370 127 64 5 6 130 22 137 8.07e-11 59.7
MsG0580029293.01.T01 MTR_8g062010 29.268 205 122 9 5 202 8 196 8.47e-11 62.8
MsG0580029293.01.T01 MTR_5g013500 26.753 385 163 18 3 296 6 362 8.58e-11 62.4
MsG0580029293.01.T01 MTR_0492s0020 30.846 201 112 9 3 200 83 259 8.81e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029293.01.T01 AT3G58930 25.979 281 163 9 6 257 2 266 2.52e-15 76.3
MsG0580029293.01.T01 AT3G58930 25.979 281 163 9 6 257 2 266 2.52e-15 76.3
MsG0580029293.01.T01 AT3G58930 25.979 281 163 9 6 257 2 266 2.52e-15 76.3
MsG0580029293.01.T01 AT3G03040 27.899 276 162 9 6 260 2 261 3.69e-15 75.9
MsG0580029293.01.T01 AT3G58860 29.902 204 120 6 6 201 7 195 9.33e-15 74.7
MsG0580029293.01.T01 AT4G13985 30.288 208 120 7 6 203 19 211 9.37e-15 74.7
MsG0580029293.01.T01 AT3G59190 32.941 170 93 5 5 165 11 168 1.17e-14 73.9
MsG0580029293.01.T01 AT3G59190 32.941 170 93 5 5 165 11 168 1.43e-14 74.3
MsG0580029293.01.T01 AT3G59200 35.294 136 74 4 6 137 7 132 1.46e-14 73.6
MsG0580029293.01.T01 AT3G58940 25.828 302 176 9 6 274 2 288 2.35e-14 73.6
MsG0580029293.01.T01 AT3G58940 25.828 302 176 9 6 274 2 288 2.35e-14 73.6
MsG0580029293.01.T01 AT3G59200 35.036 137 75 4 6 138 7 133 3.11e-14 73.2
MsG0580029293.01.T01 AT4G14103 38.931 131 71 3 6 135 8 130 3.51e-14 72.8
MsG0580029293.01.T01 AT5G38590 26.855 283 166 7 6 275 2 256 4.24e-14 71.6
MsG0580029293.01.T01 AT4G14103 40.000 125 66 3 5 128 7 123 4.30e-14 72.4
MsG0580029293.01.T01 AT4G14103 40.000 125 66 3 5 128 7 123 4.30e-14 72.4
MsG0580029293.01.T01 AT5G56420 28.634 227 131 7 1 207 1 216 4.44e-14 72.4
MsG0580029293.01.T01 AT5G56420 28.634 227 131 7 1 207 1 216 4.44e-14 72.4
MsG0580029293.01.T01 AT5G56420 28.634 227 131 7 1 207 1 216 4.44e-14 72.4
MsG0580029293.01.T01 AT3G03030 25.979 281 168 8 6 261 2 267 4.73e-14 72.0
MsG0580029293.01.T01 AT3G03030 25.979 281 168 8 6 261 2 267 6.57e-14 72.0
MsG0580029293.01.T01 AT5G22730 37.190 121 63 4 3 122 25 133 1.58e-13 70.9
MsG0580029293.01.T01 AT5G22730 37.190 121 63 4 3 122 25 133 1.86e-13 70.9
MsG0580029293.01.T01 AT5G22730 37.190 121 63 4 3 122 25 133 1.86e-13 70.9
MsG0580029293.01.T01 AT1G69630 29.048 210 112 7 6 203 18 202 2.07e-13 70.5
MsG0580029293.01.T01 AT3G58900 35.385 130 67 3 6 128 2 121 2.54e-13 69.7
MsG0580029293.01.T01 AT3G58900 35.385 130 67 3 6 128 2 121 2.92e-13 69.7
MsG0580029293.01.T01 AT3G58900 35.385 130 67 3 6 128 2 121 2.92e-13 69.7
MsG0580029293.01.T01 AT1G66300 29.439 214 119 10 6 209 29 220 3.05e-13 70.1
MsG0580029293.01.T01 AT3G59240 30.714 140 86 2 5 141 7 138 3.39e-13 70.1
MsG0580029293.01.T01 AT1G78750 29.302 215 126 10 6 210 18 216 3.53e-13 70.1
MsG0580029293.01.T01 AT1G78750 29.302 215 126 10 6 210 18 216 3.53e-13 70.1
MsG0580029293.01.T01 AT5G38390 40.336 119 54 4 6 124 2 103 4.30e-13 69.7
MsG0580029293.01.T01 AT3G58900 35.385 130 67 3 6 128 2 121 5.02e-13 69.3
MsG0580029293.01.T01 AT1G78760 37.705 122 63 5 5 125 15 124 5.14e-13 69.3
MsG0580029293.01.T01 AT5G56440 37.815 119 62 3 6 124 2 108 7.17e-13 68.9
MsG0580029293.01.T01 AT1G78730 33.884 121 72 2 6 124 22 136 1.54e-12 67.8
MsG0580029293.01.T01 AT4G14096 36.667 120 67 3 6 124 8 119 1.99e-12 67.8
MsG0580029293.01.T01 AT4G14096 36.667 120 67 3 6 124 8 119 1.99e-12 67.8
MsG0580029293.01.T01 AT1G16930 29.557 203 118 7 6 203 15 197 3.08e-12 67.0
MsG0580029293.01.T01 AT1G16930 29.557 203 118 7 6 203 15 197 3.08e-12 67.0
MsG0580029293.01.T01 AT1G16930 29.557 203 118 7 6 203 15 197 3.08e-12 67.0
MsG0580029293.01.T01 AT5G53635 36.752 117 64 3 8 124 2 108 3.20e-12 67.0
MsG0580029293.01.T01 AT1G66300 31.818 132 76 4 6 135 29 148 3.42e-12 67.0
MsG0580029293.01.T01 AT5G53840 33.333 126 54 4 5 122 17 120 4.88e-12 66.6
MsG0580029293.01.T01 AT3G49150 34.532 139 74 5 5 137 15 142 6.10e-12 66.2
MsG0580029293.01.T01 AT5G41830 33.846 130 62 4 6 124 13 129 1.04e-11 65.5
MsG0580029293.01.T01 AT5G22670 38.017 121 56 4 5 122 10 114 1.04e-11 65.5
MsG0580029293.01.T01 AT3G59000 28.899 218 123 6 6 199 2 211 1.15e-11 65.1
MsG0580029293.01.T01 AT5G38392 28.972 214 120 7 6 202 2 200 2.04e-11 62.8
MsG0580029293.01.T01 AT3G58880 29.439 214 109 6 6 201 3 192 2.16e-11 64.7
MsG0580029293.01.T01 AT5G41840 36.066 122 61 3 6 119 14 126 2.40e-11 64.7
MsG0580029293.01.T01 AT3G58930 39.773 88 48 1 6 88 2 89 3.73e-11 63.9
MsG0580029293.01.T01 AT3G58930 39.773 88 48 1 6 88 2 89 3.73e-11 63.9
MsG0580029293.01.T01 AT5G22700 36.290 124 66 3 1 124 38 148 3.84e-11 63.9
MsG0580029293.01.T01 AT5G22700 35.200 125 66 3 1 124 1 111 4.01e-11 63.5
MsG0580029293.01.T01 AT5G22700 35.200 125 66 3 1 124 1 111 4.01e-11 63.5
MsG0580029293.01.T01 AT5G22700 35.200 125 66 3 1 124 1 111 4.01e-11 63.5
MsG0580029293.01.T01 AT5G22700 35.200 125 66 3 1 124 1 111 4.01e-11 63.5
MsG0580029293.01.T01 AT5G53640 33.613 119 64 3 5 122 21 125 4.08e-11 62.0
MsG0580029293.01.T01 AT5G22700 36.290 124 66 3 1 124 38 148 4.22e-11 63.5
MsG0580029293.01.T01 AT3G62440 52.239 67 28 2 6 72 2 64 4.55e-11 63.5
MsG0580029293.01.T01 AT3G59150 42.683 82 43 1 4 81 11 92 4.76e-11 63.5
MsG0580029293.01.T01 AT3G59170 27.536 276 127 10 5 246 6 242 5.20e-11 63.5
MsG0580029293.01.T01 AT3G59000 35.156 128 70 2 6 128 2 121 6.57e-11 63.2
MsG0580029293.01.T01 AT4G22280 35.897 117 61 3 6 122 2 104 6.72e-11 63.2
MsG0580029293.01.T01 AT4G22280 35.897 117 61 3 6 122 2 104 7.47e-11 62.4
MsG0580029293.01.T01 AT4G00320 34.400 125 58 5 6 119 13 124 8.65e-11 62.8

Find 57 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTGATCAACTATTATT+TGG 0.125218 5:+94831938 MsG0580029293.01.T01:CDS
AGAAATTGTGGAGTGGATTT+TGG 0.197113 5:-94832195 None:intergenic
AACTGAAAGTTGACAAGTTT+TGG 0.207943 5:-94832394 None:intergenic
GGTCAAGAATTTGAAGTTTA+GGG 0.259066 5:-94831989 None:intergenic
AGGTCAAGAATTTGAAGTTT+AGG 0.266399 5:-94831990 None:intergenic
ATCTTAGAACTTGCACTATT+CGG 0.268042 5:+94832226 MsG0580029293.01.T01:CDS
GCATTCCCAAGCTCACAAAA+TGG 0.287482 5:+94830159 MsG0580029293.01.T01:CDS
TTTGGATGCCCTTGGACTTA+AGG 0.331956 5:-94832376 None:intergenic
TCTTAGAACTTGCACTATTC+GGG 0.354121 5:+94832227 MsG0580029293.01.T01:CDS
CCAAGAGATGGACTCAACTA+TGG 0.371741 5:+94829955 MsG0580029293.01.T01:CDS
AGTTTCTAAGAATACAACTA+TGG 0.376611 5:+94831768 MsG0580029293.01.T01:CDS
GAGGAAAAGAACAAGAAAGT+TGG 0.383036 5:+94832166 MsG0580029293.01.T01:CDS
AATCTTAACAAACCTTGTAT+AGG 0.399030 5:-94832010 None:intergenic
CTAACATAAGGTCATGTTGT+AGG 0.408282 5:-94832266 None:intergenic
ACAGTCTCTCAATTTGATAT+CGG 0.418226 5:-94830003 None:intergenic
AACAGAAGACACAAGCTGAT+TGG 0.427399 5:+94832127 MsG0580029293.01.T01:intron
GAATATATCTTGCTAACATA+AGG 0.427625 5:-94832278 None:intergenic
TAAGAGATTTGACATGATTA+CGG 0.430109 5:-94830136 None:intergenic
CTTCCATTCTTTCCAAGAGA+TGG 0.441502 5:+94829943 MsG0580029293.01.T01:CDS
CTTCAATAATTTAACTCACT+TGG 0.442680 5:+94831920 MsG0580029293.01.T01:CDS
GAATTTGAAGTTTAGGGCAG+TGG 0.443210 5:-94831983 None:intergenic
ACAGAAGACACAAGCTGATT+GGG 0.452074 5:+94832128 MsG0580029293.01.T01:intron
AGTCCATCTCTTGGAAAGAA+TGG 0.453001 5:-94829946 None:intergenic
CATTCCCAAGCTCACAAAAT+GGG 0.453350 5:+94830160 MsG0580029293.01.T01:CDS
CAAGTGAGTTAAATTATTGA+AGG 0.455293 5:-94831919 None:intergenic
AGGAAAAGAACAAGAAAGTT+GGG 0.471092 5:+94832167 MsG0580029293.01.T01:CDS
CTCTTTCAGCAATGGAGCCA+TGG 0.480225 5:+94829841 None:intergenic
CCATAGTTGAGTCCATCTCT+TGG 0.500216 5:-94829955 None:intergenic
AGATATAATGAAAGAAATTG+TGG 0.500396 5:-94832207 None:intergenic
AGAACAACCTCAAATAGAAA+AGG 0.503624 5:+94832347 MsG0580029293.01.T01:CDS
GTCGATGGAATGATTACCAT+TGG 0.512852 5:-94830081 None:intergenic
ATGTGGCACAGGATATCATC+TGG 0.524704 5:-94829885 None:intergenic
TCAAATTCTTGACCTATACA+AGG 0.544504 5:+94831998 MsG0580029293.01.T01:CDS
TCTCTTGGAAAGAATGGAAG+TGG 0.545003 5:-94829940 None:intergenic
TTGCTTATTCTATCCTCCCA+TGG 0.552229 5:-94829858 None:intergenic
GATCATTGAGCAAATTGAGA+AGG 0.559619 5:-94830223 None:intergenic
TCTTTCAGCAATGGAGCCAT+GGG 0.560127 5:+94829842 None:intergenic
AGGAACTGTCCTTAAGTCCA+AGG 0.562215 5:+94832367 MsG0580029293.01.T01:CDS
GTCCAAGATAAAACTGTCGA+TGG 0.568112 5:-94830096 None:intergenic
TGAAAGAGAGAATGTGGCAC+AGG 0.568591 5:-94829896 None:intergenic
TGAGTTAAATTATTGAAGGT+AGG 0.572320 5:-94831915 None:intergenic
AAACTGATTGAAGAGGAGAA+TGG 0.580542 5:-94830030 None:intergenic
GTTTCTAAGAATACAACTAT+GGG 0.599278 5:+94831769 MsG0580029293.01.T01:CDS
AGTCGACAAACTGATTGAAG+AGG 0.603016 5:-94830037 None:intergenic
ATTTGATATCGGAGAAGTCG+AGG 0.610601 5:-94829992 None:intergenic
TGGGATGAGAACACTGAAGG+AGG 0.612579 5:+94832147 MsG0580029293.01.T01:CDS
TTGAAGGTAGGCAAATCATA+CGG 0.618002 5:-94831903 None:intergenic
ATGCTCTCGCGAGAAGCCAA+TGG 0.623393 5:+94830065 MsG0580029293.01.T01:CDS
TTCAGCAATGGAGCCATGGG+AGG 0.623801 5:+94829845 None:intergenic
GAGGGTTGAAAGAGAGAATG+TGG 0.625777 5:-94829902 None:intergenic
TCTAAGAATACAACTATGGG+AGG 0.626202 5:+94831772 MsG0580029293.01.T01:CDS
GGAACTGTCCTTAAGTCCAA+GGG 0.629323 5:+94832368 MsG0580029293.01.T01:CDS
GATTGGGATGAGAACACTGA+AGG 0.629797 5:+94832144 MsG0580029293.01.T01:CDS
TAACTTTGCGTTGAACAACA+AGG 0.631286 5:-94830187 None:intergenic
TAATGAAAGAAATTGTGGAG+TGG 0.653602 5:-94832202 None:intergenic
ATATCGGAGAAGTCGAGGAG+AGG 0.657038 5:-94829987 None:intergenic
AAAAGAACAAGAAAGTTGGG+TGG 0.669505 5:+94832170 MsG0580029293.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTATTTTAAAGAGAAA+TGG - Chr5:94830961-94830980 None:intergenic 10.0%
!!! TCTGTTGTTTTTTTTTTTTT+TGG + Chr5:94830517-94830536 MsG0580029293.01.T01:intron 15.0%
!! AACTAGTAAGTGTTTATATA+TGG - Chr5:94831538-94831557 None:intergenic 20.0%
!! AAGAATCATATATTATCGAA+GGG + Chr5:94831035-94831054 MsG0580029293.01.T01:intron 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG - Chr5:94831537-94831556 None:intergenic 20.0%
!! AGATATAATGAAAGAAATTG+TGG - Chr5:94832210-94832229 None:intergenic 20.0%
!! AGGAAAAATAAAAAATCAGT+AGG - Chr5:94831859-94831878 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG + Chr5:94831537-94831556 MsG0580029293.01.T01:intron 20.0%
!! GAAATTCAAATTTAACAGTT+TGG - Chr5:94830547-94830566 None:intergenic 20.0%
!! TATATAAACACTTACTAGTT+GGG + Chr5:94831538-94831557 MsG0580029293.01.T01:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG - Chr5:94831632-94831651 None:intergenic 20.0%
!! TTCGATAATATATGATTCTT+CGG - Chr5:94831035-94831054 None:intergenic 20.0%
!!! AATGAAAGCACTTTTTAATT+CGG + Chr5:94831745-94831764 MsG0580029293.01.T01:CDS 20.0%
!!! ATTATTTTAAAGAGAAATGG+TGG - Chr5:94830958-94830977 None:intergenic 20.0%
!!! TGATACCATATTAATTTGAA+CGG - Chr5:94830830-94830849 None:intergenic 20.0%
!!! TTTTACAAACTATGACAATA+TGG + Chr5:94832316-94832335 MsG0580029293.01.T01:CDS 20.0%
!!! TTTTCCTTTCTTCATAATTT+AGG + Chr5:94831872-94831891 MsG0580029293.01.T01:intron 20.0%
! AAAAAAAACGTGTTTGCTTA+AGG - Chr5:94831299-94831318 None:intergenic 25.0%
! AATCTTAACAAACCTTGTAT+AGG - Chr5:94832013-94832032 None:intergenic 25.0%
! ATATAAACACTTACTAGTTG+GGG + Chr5:94831539-94831558 MsG0580029293.01.T01:intron 25.0%
! CAAGTGAGTTAAATTATTGA+AGG - Chr5:94831922-94831941 None:intergenic 25.0%
! CTTCAATAATTTAACTCACT+TGG + Chr5:94831920-94831939 MsG0580029293.01.T01:CDS 25.0%
! GAAGAATCATATATTATCGA+AGG + Chr5:94831034-94831053 MsG0580029293.01.T01:intron 25.0%
! GAATATATCTTGCTAACATA+AGG - Chr5:94832281-94832300 None:intergenic 25.0%
! GTATCATTACCATTCTATTA+TGG + Chr5:94830844-94830863 MsG0580029293.01.T01:intron 25.0%
! TAAGAGATTTGACATGATTA+CGG - Chr5:94830139-94830158 None:intergenic 25.0%
! TATGCCTAAATTATGAAGAA+AGG - Chr5:94831879-94831898 None:intergenic 25.0%
! TGAGTTAAATTATTGAAGGT+AGG - Chr5:94831918-94831937 None:intergenic 25.0%
! TTTACAACTAAAGATAGTGT+CGG - Chr5:94830282-94830301 None:intergenic 25.0%
! TTTCCTTAATTGGATATATC+CGG + Chr5:94831316-94831335 MsG0580029293.01.T01:intron 25.0%
!! AGTTTCTAAGAATACAACTA+TGG + Chr5:94831768-94831787 MsG0580029293.01.T01:CDS 25.0%
!! GTTTCTAAGAATACAACTAT+GGG + Chr5:94831769-94831788 MsG0580029293.01.T01:CDS 25.0%
!!! ACACGTTTTTTTTCCTTAAT+TGG + Chr5:94831306-94831325 MsG0580029293.01.T01:intron 25.0%
!!! GAAACTTGTTAAAAACAAGT+CGG + Chr5:94831137-94831156 MsG0580029293.01.T01:intron 25.0%
!!! GAATTAAAAAGTGCTTTCAT+TGG - Chr5:94831746-94831765 None:intergenic 25.0%
AAACACTTGATTGATACTGT+TGG - Chr5:94831663-94831682 None:intergenic 30.0%
AAATCATATCCAGAAACTTC+CGG - Chr5:94831338-94831357 None:intergenic 30.0%
ACAGTCTCTCAATTTGATAT+CGG - Chr5:94830006-94830025 None:intergenic 30.0%
ACTATGAAAAAACTAGTGTG+TGG - Chr5:94831599-94831618 None:intergenic 30.0%
ACTTCTCCAAAACATGAATA+TGG + Chr5:94830905-94830924 MsG0580029293.01.T01:intron 30.0%
AGAACAACCTCAAATAGAAA+AGG + Chr5:94832347-94832366 MsG0580029293.01.T01:CDS 30.0%
AGAATTACACCCTCAAAATA+TGG + Chr5:94830750-94830769 MsG0580029293.01.T01:intron 30.0%
AGGAAAAGAACAAGAAAGTT+GGG + Chr5:94832167-94832186 MsG0580029293.01.T01:CDS 30.0%
ATCTTAGAACTTGCACTATT+CGG + Chr5:94832226-94832245 MsG0580029293.01.T01:CDS 30.0%
CGAAACCGTTCAAATTAATA+TGG + Chr5:94830822-94830841 MsG0580029293.01.T01:intron 30.0%
CTATGAAAAAACTAGTGTGT+GGG - Chr5:94831598-94831617 None:intergenic 30.0%
GTAAAACATTAGTAACCCTA+AGG + Chr5:94830297-94830316 MsG0580029293.01.T01:intron 30.0%
GTTCATCAACAAACATAACA+CGG - Chr5:94830404-94830423 None:intergenic 30.0%
TAAAAATGTCCCACATTGAA+GGG - Chr5:94831568-94831587 None:intergenic 30.0%
TAACAAAAAACGAGTGACTT+GGG + Chr5:94831256-94831275 MsG0580029293.01.T01:intron 30.0%
TAATGAAAGAAATTGTGGAG+TGG - Chr5:94832205-94832224 None:intergenic 30.0%
TCAAATTCTTGACCTATACA+AGG + Chr5:94831998-94832017 MsG0580029293.01.T01:CDS 30.0%
TTAAAAATGTCCCACATTGA+AGG - Chr5:94831569-94831588 None:intergenic 30.0%
TTACAAACTCTCCCTATAAA+AGG - Chr5:94831239-94831258 None:intergenic 30.0%
TTACAACTAAAGATAGTGTC+GGG - Chr5:94830281-94830300 None:intergenic 30.0%
! AACGATTAAGCCATATTTTG+AGG - Chr5:94830763-94830782 None:intergenic 30.0%
! AACTGAAAGTTGACAAGTTT+TGG - Chr5:94832397-94832416 None:intergenic 30.0%
! AGGTCAAGAATTTGAAGTTT+AGG - Chr5:94831993-94832012 None:intergenic 30.0%
! CTTGGTGATCAACTATTATT+TGG + Chr5:94831938-94831957 MsG0580029293.01.T01:CDS 30.0%
! GGTCAAGAATTTGAAGTTTA+GGG - Chr5:94831992-94832011 None:intergenic 30.0%
! TTCGGTAGATGATAGAATTT+TGG - Chr5:94830569-94830588 None:intergenic 30.0%
! TTCGGTGTAAAGAATCAAAT+GGG + Chr5:94831204-94831223 MsG0580029293.01.T01:intron 30.0%
! TTCTGGATATGATTTTGGAT+CGG + Chr5:94831343-94831362 MsG0580029293.01.T01:intron 30.0%
! TTTCGGTGTAAAGAATCAAA+TGG + Chr5:94831203-94831222 MsG0580029293.01.T01:intron 30.0%
!! ACGATTAAGCCATATTTTGA+GGG - Chr5:94830762-94830781 None:intergenic 30.0%
!! GAAGTTTCTGGATATGATTT+TGG + Chr5:94831338-94831357 MsG0580029293.01.T01:intron 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG - Chr5:94830900-94830919 None:intergenic 30.0%
!!! GTTTTTTCGTTTTCTTCAGT+TGG + Chr5:94830342-94830361 MsG0580029293.01.T01:intron 30.0%
AAAAGAACAAGAAAGTTGGG+TGG + Chr5:94832170-94832189 MsG0580029293.01.T01:CDS 35.0%
AAACTGATTGAAGAGGAGAA+TGG - Chr5:94830033-94830052 None:intergenic 35.0%
AACAAAAAACGAGTGACTTG+GGG + Chr5:94831257-94831276 MsG0580029293.01.T01:intron 35.0%
AAGAACACTCTTAATACCGA+AGG + Chr5:94831091-94831110 MsG0580029293.01.T01:intron 35.0%
ACTCAACCTAGTAACAACTT+CGG - Chr5:94830587-94830606 None:intergenic 35.0%
AGAACACTCTTAATACCGAA+GGG + Chr5:94831092-94831111 MsG0580029293.01.T01:intron 35.0%
AGTCTACTTTGCACAACTTT+GGG - Chr5:94830650-94830669 None:intergenic 35.0%
ATCGCTAAAAACCCTTCATT+TGG + Chr5:94830377-94830396 MsG0580029293.01.T01:intron 35.0%
ATGGGAAAAGTGACATCTAA+GGG - Chr5:94831519-94831538 None:intergenic 35.0%
ATTCACCCGTTCACAAAATT+GGG + Chr5:94831478-94831497 MsG0580029293.01.T01:intron 35.0%
CTAACATAAGGTCATGTTGT+AGG - Chr5:94832269-94832288 None:intergenic 35.0%
CTTCCGGATATATCCAATTA+AGG - Chr5:94831322-94831341 None:intergenic 35.0%
CTTGTTAAAAACAAGTCGGA+GGG + Chr5:94831141-94831160 MsG0580029293.01.T01:intron 35.0%
GACTATGAACTTAAGACCAA+GGG + Chr5:94831057-94831076 MsG0580029293.01.T01:intron 35.0%
GAGGAAAAGAACAAGAAAGT+TGG + Chr5:94832166-94832185 MsG0580029293.01.T01:CDS 35.0%
GATCATTGAGCAAATTGAGA+AGG - Chr5:94830226-94830245 None:intergenic 35.0%
GTAACAAAAAACGAGTGACT+TGG + Chr5:94831255-94831274 MsG0580029293.01.T01:intron 35.0%
GTGATAACACCATATTTGAG+TGG - Chr5:94830878-94830897 None:intergenic 35.0%
TAACTTTGCGTTGAACAACA+AGG - Chr5:94830190-94830209 None:intergenic 35.0%
TAGTCTACTTTGCACAACTT+TGG - Chr5:94830651-94830670 None:intergenic 35.0%
TATGGGAAAAGTGACATCTA+AGG - Chr5:94831520-94831539 None:intergenic 35.0%
TCGGTGTAAAGAATCAAATG+GGG + Chr5:94831205-94831224 MsG0580029293.01.T01:intron 35.0%
TCTAAGAATACAACTATGGG+AGG + Chr5:94831772-94831791 MsG0580029293.01.T01:CDS 35.0%
TCTTAGAACTTGCACTATTC+GGG + Chr5:94832227-94832246 MsG0580029293.01.T01:CDS 35.0%
TTAATCGAACAGTTGTAGCT+GGG - Chr5:94830704-94830723 None:intergenic 35.0%
TTGAAGGTAGGCAAATCATA+CGG - Chr5:94831906-94831925 None:intergenic 35.0%
! ACTTGTTAAAAACAAGTCGG+AGG + Chr5:94831140-94831159 MsG0580029293.01.T01:intron 35.0%
! GACAGTTCCTTTTCTATTTG+AGG - Chr5:94832357-94832376 None:intergenic 35.0%
! GTAGTGCCATATTCATGTTT+TGG - Chr5:94830914-94830933 None:intergenic 35.0%
! TCGTTTTCTTCAGTTGGATT+TGG + Chr5:94830348-94830367 MsG0580029293.01.T01:intron 35.0%
! TCTGGATATGATTTTGGATC+GGG + Chr5:94831344-94831363 MsG0580029293.01.T01:intron 35.0%
! TTAACCCATTTTGTGAGCTT+GGG - Chr5:94830167-94830186 None:intergenic 35.0%
!! AGAAATTGTGGAGTGGATTT+TGG - Chr5:94832198-94832217 None:intergenic 35.0%
!! GAGATTTTGTTGCTTCTTGA+TGG + Chr5:94830426-94830445 MsG0580029293.01.T01:intron 35.0%
!! TTCCATCGACAGTTTTATCT+TGG + Chr5:94830094-94830113 MsG0580029293.01.T01:CDS 35.0%
!!! AAATGAAGGGTTTTTAGCGA+TGG - Chr5:94830378-94830397 None:intergenic 35.0%
!!! AAGCATCGACTGTGAATTTT+CGG + Chr5:94831186-94831205 MsG0580029293.01.T01:intron 35.0%
AACAGAAGACACAAGCTGAT+TGG + Chr5:94832127-94832146 MsG0580029293.01.T01:intron 40.0%
AACTTAAGACCAAGGGACTA+TGG + Chr5:94831064-94831083 MsG0580029293.01.T01:intron 40.0%
ACAGAAGACACAAGCTGATT+GGG + Chr5:94832128-94832147 MsG0580029293.01.T01:intron 40.0%
ACATAACACGGTCCAAATGA+AGG - Chr5:94830392-94830411 None:intergenic 40.0%
AGTCCATCTCTTGGAAAGAA+TGG - Chr5:94829949-94829968 None:intergenic 40.0%
AGTCGACAAACTGATTGAAG+AGG - Chr5:94830040-94830059 None:intergenic 40.0%
ATTTGATATCGGAGAAGTCG+AGG - Chr5:94829995-94830014 None:intergenic 40.0%
CATAACACGGTCCAAATGAA+GGG - Chr5:94830391-94830410 None:intergenic 40.0%
CATCTACCGAAGTTGTTACT+AGG + Chr5:94830578-94830597 MsG0580029293.01.T01:intron 40.0%
CATTAGTAACCCTAAGGCTT+AGG + Chr5:94830303-94830322 MsG0580029293.01.T01:intron 40.0%
CATTCACCCGTTCACAAAAT+TGG + Chr5:94831477-94831496 MsG0580029293.01.T01:intron 40.0%
CATTCCCAAGCTCACAAAAT+GGG + Chr5:94830160-94830179 MsG0580029293.01.T01:CDS 40.0%
CGATGTATATACGAGCAATG+TGG + Chr5:94830479-94830498 MsG0580029293.01.T01:intron 40.0%
CTTAGGTGGTTCGATGTAAA+TGG + Chr5:94830320-94830339 MsG0580029293.01.T01:intron 40.0%
CTTCCATTCTTTCCAAGAGA+TGG + Chr5:94829943-94829962 MsG0580029293.01.T01:CDS 40.0%
GAGAAGAGAGGAAAAAACAC+AGG + Chr5:94831163-94831182 MsG0580029293.01.T01:intron 40.0%
GGACTATGAACTTAAGACCA+AGG + Chr5:94831056-94831075 MsG0580029293.01.T01:intron 40.0%
GTCCAAGATAAAACTGTCGA+TGG - Chr5:94830099-94830118 None:intergenic 40.0%
GTCGATGGAATGATTACCAT+TGG - Chr5:94830084-94830103 None:intergenic 40.0%
GTCTCAGCACCATAATAGAA+TGG - Chr5:94830856-94830875 None:intergenic 40.0%
GTGGTATCACCATATTTGAG+TGG - Chr5:94830939-94830958 None:intergenic 40.0%
GTTAATCGAACAGTTGTAGC+TGG - Chr5:94830705-94830724 None:intergenic 40.0%
TCTCTTGGAAAGAATGGAAG+TGG - Chr5:94829943-94829962 None:intergenic 40.0%
TGCCTTGAAATCCTGAAGAA+CGG - Chr5:94830457-94830476 None:intergenic 40.0%
TGGATATATCCGGAAGTTTC+TGG + Chr5:94831326-94831345 MsG0580029293.01.T01:intron 40.0%
TTAATACCGAAGGGACAGAA+AGG + Chr5:94831101-94831120 MsG0580029293.01.T01:intron 40.0%
TTCTTAAGACCATAGTCCCT+TGG - Chr5:94831076-94831095 None:intergenic 40.0%
TTGAACGGTTTCGAATAGAG+CGG - Chr5:94830815-94830834 None:intergenic 40.0%
TTGCTTATTCTATCCTCCCA+TGG - Chr5:94829861-94829880 None:intergenic 40.0%
! AAAGATAGTGTCGGGCAATT+TGG - Chr5:94830273-94830292 None:intergenic 40.0%
! AAGATAGTGTCGGGCAATTT+GGG - Chr5:94830272-94830291 None:intergenic 40.0%
! GAAGTGGTAACAGCGTTTTT+GGG - Chr5:94829927-94829946 None:intergenic 40.0%
! GAATTTGAAGTTTAGGGCAG+TGG - Chr5:94831986-94832005 None:intergenic 40.0%
! GATATGATTTTGGATCGGGT+CGG + Chr5:94831348-94831367 MsG0580029293.01.T01:intron 40.0%
! GTTAACCCATTTTGTGAGCT+TGG - Chr5:94830168-94830187 None:intergenic 40.0%
AATTTGGGGAGCAGAAAACC+GGG - Chr5:94830257-94830276 None:intergenic 45.0%
AGGAACTGTCCTTAAGTCCA+AGG + Chr5:94832367-94832386 MsG0580029293.01.T01:CDS 45.0%
ATCGAACCACCTAAGCCTTA+GGG - Chr5:94830315-94830334 None:intergenic 45.0%
ATGTGGCACAGGATATCATC+TGG - Chr5:94829888-94829907 None:intergenic 45.0%
CAATTTGGGGAGCAGAAAAC+CGG - Chr5:94830258-94830277 None:intergenic 45.0%
CACAAAATTGGGTACCCCAA+GGG + Chr5:94831489-94831508 MsG0580029293.01.T01:intron 45.0%
CCATAGTTGAGTCCATCTCT+TGG - Chr5:94829958-94829977 None:intergenic 45.0%
GAGGGTTGAAAGAGAGAATG+TGG - Chr5:94829905-94829924 None:intergenic 45.0%
GATTGGGATGAGAACACTGA+AGG + Chr5:94832144-94832163 MsG0580029293.01.T01:CDS 45.0%
GCACTACGACCACTCAAATA+TGG + Chr5:94830927-94830946 MsG0580029293.01.T01:intron 45.0%
GCATTCCCAAGCTCACAAAA+TGG + Chr5:94830159-94830178 MsG0580029293.01.T01:CDS 45.0%
GCCTTGAAATCCTGAAGAAC+GGG - Chr5:94830456-94830475 None:intergenic 45.0%
GGAACTGTCCTTAAGTCCAA+GGG + Chr5:94832368-94832387 MsG0580029293.01.T01:CDS 45.0%
GTGCTGAGACCACTCAAATA+TGG + Chr5:94830866-94830885 MsG0580029293.01.T01:intron 45.0%
TAGTAACCCTAAGGCTTAGG+TGG + Chr5:94830306-94830325 MsG0580029293.01.T01:intron 45.0%
TCACAAAATTGGGTACCCCA+AGG + Chr5:94831488-94831507 MsG0580029293.01.T01:intron 45.0%
TCCCGTTCTTCAGGATTTCA+AGG + Chr5:94830452-94830471 MsG0580029293.01.T01:intron 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - Chr5:94831110-94831129 None:intergenic 45.0%
TGAAAGAGAGAATGTGGCAC+AGG - Chr5:94829899-94829918 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG + Chr5:94830782-94830801 MsG0580029293.01.T01:intron 45.0%
TTTGGATGCCCTTGGACTTA+AGG - Chr5:94832379-94832398 None:intergenic 45.0%
TTTGTTACGCGTAGCGCTTA+CGG + Chr5:94831386-94831405 MsG0580029293.01.T01:intron 45.0%
! AGATAGTGTCGGGCAATTTG+GGG - Chr5:94830271-94830290 None:intergenic 45.0%
! CCAAGAGATGGACTCAACTA+TGG + Chr5:94829955-94829974 MsG0580029293.01.T01:CDS 45.0%
! GGAAGTGGTAACAGCGTTTT+TGG - Chr5:94829928-94829947 None:intergenic 45.0%
! GGGTACCCAATTTTGTGAAC+GGG - Chr5:94831486-94831505 None:intergenic 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + Chr5:94830619-94830638 MsG0580029293.01.T01:intron 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG - Chr5:94831487-94831506 None:intergenic 45.0%
!! TGGTAACAGCGTTTTTGGGA+GGG - Chr5:94829923-94829942 None:intergenic 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG - Chr5:94830689-94830708 None:intergenic 45.0%
!!! TGACAAGTTTTGGATGCCCT+TGG - Chr5:94832387-94832406 None:intergenic 45.0%
ACGTCTTAAAGAGAGCGACC+TGG - Chr5:94830615-94830634 None:intergenic 50.0%
ATATCGGAGAAGTCGAGGAG+AGG - Chr5:94829990-94830009 None:intergenic 50.0%
ATTTGGGGAGCAGAAAACCG+GGG - Chr5:94830256-94830275 None:intergenic 50.0%
CATCGAACCACCTAAGCCTT+AGG - Chr5:94830316-94830335 None:intergenic 50.0%
CTCAATGATCCAATTCCCCC+CGG + Chr5:94830236-94830255 MsG0580029293.01.T01:CDS 50.0%
TGGGATGAGAACACTGAAGG+AGG + Chr5:94832147-94832166 MsG0580029293.01.T01:CDS 50.0%
TTGGGGTGACCCTTCAATGT+GGG + Chr5:94831556-94831575 MsG0580029293.01.T01:intron 50.0%
! ACATCTAAGGGTGTGCCCTT+GGG - Chr5:94831507-94831526 None:intergenic 50.0%
! GGGCGAGCTCTCCTTTTATA+GGG + Chr5:94831225-94831244 MsG0580029293.01.T01:intron 50.0%
! TACTAGGTTGAGTCACGACC+AGG + Chr5:94830594-94830613 MsG0580029293.01.T01:intron 50.0%
! TGATGGATGTCCCGTTCTTC+AGG + Chr5:94830443-94830462 MsG0580029293.01.T01:intron 50.0%
!! GTGGTAACAGCGTTTTTGGG+AGG - Chr5:94829924-94829943 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG - Chr5:94830686-94830705 None:intergenic 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG - Chr5:94830683-94830702 None:intergenic 50.0%
ACAAGTCGGAGGGAGAAGAG+AGG + Chr5:94831151-94831170 MsG0580029293.01.T01:intron 55.0%
AGCAGAAAACCGGGGGGAAT+TGG - Chr5:94830248-94830267 None:intergenic 55.0%
ATGCTCTCGCGAGAAGCCAA+TGG + Chr5:94830065-94830084 MsG0580029293.01.T01:CDS 55.0%
CGGTTACGTACCGTATCGAG+TGG - Chr5:94830795-94830814 None:intergenic 55.0%
GTTGGGGTGACCCTTCAATG+TGG + Chr5:94831555-94831574 MsG0580029293.01.T01:intron 55.0%
TTTGGGGAGCAGAAAACCGG+GGG - Chr5:94830255-94830274 None:intergenic 55.0%
! CATCTAAGGGTGTGCCCTTG+GGG - Chr5:94831506-94831525 None:intergenic 55.0%
! GACATCTAAGGGTGTGCCCT+TGG - Chr5:94831508-94831527 None:intergenic 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG + Chr5:94831224-94831243 MsG0580029293.01.T01:intron 55.0%
TTGGGGAGCAGAAAACCGGG+GGG - Chr5:94830254-94830273 None:intergenic 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - Chr5:94830678-94830697 None:intergenic 60.0%
CTATCAACCACGCCGCCTCC+AGG + Chr5:94830668-94830687 MsG0580029293.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 94829852 94832422 94829852 ID=MsG0580029293.01;Name=MsG0580029293.01
Chr5 mRNA 94829852 94832422 94829852 ID=MsG0580029293.01.T01;Parent=MsG0580029293.01;Name=MsG0580029293.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|4|0|299
Chr5 exon 94829852 94830257 94829852 ID=MsG0580029293.01.T01:exon:18270;Parent=MsG0580029293.01.T01
Chr5 exon 94831717 94831793 94831717 ID=MsG0580029293.01.T01:exon:18271;Parent=MsG0580029293.01.T01
Chr5 exon 94831894 94832019 94831894 ID=MsG0580029293.01.T01:exon:18272;Parent=MsG0580029293.01.T01
Chr5 exon 94832132 94832422 94832132 ID=MsG0580029293.01.T01:exon:18273;Parent=MsG0580029293.01.T01
Chr5 CDS 94829852 94830257 94829852 ID=MsG0580029293.01.T01:cds;Parent=MsG0580029293.01.T01
Chr5 CDS 94831717 94831793 94831717 ID=MsG0580029293.01.T01:cds;Parent=MsG0580029293.01.T01
Chr5 CDS 94831894 94832019 94831894 ID=MsG0580029293.01.T01:cds;Parent=MsG0580029293.01.T01
Chr5 CDS 94832132 94832422 94832132 ID=MsG0580029293.01.T01:cds;Parent=MsG0580029293.01.T01
Gene Sequence

>MsG0580029293.01.T01

ATGGAGCCATGGGAGGATAGAATAAGCAATTTACCAGATGATATCCTGTGCCACATTCTCTCTTTCAACCCTCCCAAAAACGCTGTTACCACTTCCATTCTTTCCAAGAGATGGACTCAACTATGGCGCTTTGTTCCTCTCCTCGACTTCTCCGATATCAAATTGAGAGACTGTGAATCCATTCTCCTCTTCAATCAGTTTGTCGACTATGTTATGCTCTCGCGAGAAGCCAATGGTAATCATTCCATCGACAGTTTTATCTTGGACGTTGAATATGCAGCTGACCGTAATCATGTCAAATCTCTTAGCATTCCCAAGCTCACAAAATGGGTTAACCTTGTTGTTCAACGCAAAGTTAAGCATCTTCATCTCCTTCTCAATTTGCTCAATGATCCAATTCCCCCCGATATTATTGATGTTAATTGTGATATTCCAATGAAAGCACTTTTTAATTCGGAGTTTCTAAGAATACAACTATGGGAGGCATATACTCCGTATGATTTGCCTACCTTCAATAATTTAACTCACTTGGTGATCAACTATTATTTGGATATGTTTATAGAAGTGCTTCACCACTGCCCTAAACTTCAAATTCTTGACCTATACAAGAAGACACAAGCTGATTGGGATGAGAACACTGAAGGAGGAAAAGAACAAGAAAGTTGGGTGGATCCAAAATCCACTCCACAATTTCTTTCATTATATCTTAGAACTTGCACTATTCGGGACTTCGCTTTTGTAGACCTACAACATGACCTTATGTTAGCAAGATATATTCTAAATAATGCAAGAGTTTTACAAACTATGACAATATGGAGTGACAAAGAACAACCTCAAATAGAAAAGGAACTGTCCTTAAGTCCAAGGGCATCCAAAACTTGTCAACTTTCAGTTTATTGA
Protein sequence

>MsG0580029293.01.T01

MEPWEDRISNLPDDILCHILSFNPPKNAVTTSILSKRWTQLWRFVPLLDFSDIKLRDCESILLFNQFVDYVMLSREANGNHSIDSFILDVEYAADRNHVKSLSIPKLTKWVNLVVQRKVKHLHLLLNLLNDPIPPDIIDVNCDIPMKALFNSEFLRIQLWEAYTPYDLPTFNNLTHLVINYYLDMFIEVLHHCPKLQILDLYKKTQADWDENTEGGKEQESWVDPKSTPQFLSLYLRTCTIRDFAFVDLQHDLMLARYILNNARVLQTMTIWSDKEQPQIEKELSLSPRASKTCQLSVY*