AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039529.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039529.01.T01 MTR_7g075050 90.221 317 8 1 1 317 1 294 0.0 573
MsG0780039529.01.T01 MTR_7g075050 89.590 317 8 1 1 317 1 292 0.0 568
MsG0780039529.01.T01 MTR_8g059560 89.274 317 11 1 1 317 1 294 0.0 568
MsG0780039529.01.T01 MTR_8g059560 88.644 317 11 1 1 317 1 292 0.0 561
MsG0780039529.01.T01 MTR_7g075050 85.227 264 16 1 1 264 1 241 6.57e-157 439
MsG0780039529.01.T01 MTR_8g059560 84.848 264 17 1 1 264 1 241 1.43e-156 437
MsG0780039529.01.T01 MTR_8g059560 86.822 258 11 1 1 258 1 235 1.44e-156 438
MsG0780039529.01.T01 MTR_7g075050 87.500 256 9 1 1 256 1 233 2.43e-156 437
MsG0780039529.01.T01 MTR_8g059560 84.091 264 17 1 1 264 1 239 1.16e-154 433
MsG0780039529.01.T01 MTR_8g059560 86.047 258 11 1 1 258 1 233 1.54e-154 433
MsG0780039529.01.T01 MTR_8g059560 97.126 174 5 0 1 174 1 174 1.13e-115 331
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039529.01.T01 AT3G20070 38.750 320 151 5 1 315 1 280 1.24e-60 195
MsG0780039529.01.T01 AT3G20070 38.750 320 151 5 1 315 1 280 1.24e-60 195
MsG0780039529.01.T01 AT3G20070 38.750 320 151 5 1 315 1 280 1.24e-60 195
MsG0780039529.01.T01 AT3G20070 34.420 276 136 5 45 315 1 236 7.49e-40 140

Find 81 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTCCACTTCAATTATT+TGG 0.074728 7:-65337640 MsG0780039529.01.T01:three_prime_UTR
AGAATTCATTTCCTAGTTTA+AGG 0.120694 7:-65337348 MsG0780039529.01.T01:three_prime_UTR
GTTCTAATTCCTCACCTTAT+TGG 0.204078 7:+65341195 None:intergenic
ATTCATTAATCAAATTAATT+AGG 0.208967 7:+65337561 None:intergenic
AACCTTGAGAGTAGTGTATT+TGG 0.216226 7:+65343338 None:intergenic
CGTCACCCTTTCAAAGAATA+TGG 0.221307 7:+65337761 None:intergenic
TCTTGGACAAATTAATGATT+TGG 0.236004 7:-65342996 MsG0780039529.01.T01:CDS
CCAATGTGTCCACTTCAATT+TGG 0.236654 7:+65337527 None:intergenic
CATTCTTATAGATGAGTTAT+TGG 0.252362 7:+65341342 None:intergenic
AGTCTTACATTGATATTTAT+AGG 0.262897 7:+65337241 None:intergenic
TTCAACCAGTTCATTGTCTT+TGG 0.270102 7:+65342449 None:intergenic
ATGTCTTCCCTCATCCATTC+TGG 0.291129 7:+65337807 None:intergenic
CTTGGACAAATTAATGATTT+GGG 0.321697 7:-65342995 MsG0780039529.01.T01:CDS
ACTGAAAATGATAAGCTTCT+TGG 0.322097 7:-65343013 MsG0780039529.01.T01:CDS
TCGGTTTACCCTCCACCTTT+TGG 0.329048 7:-65337684 MsG0780039529.01.T01:three_prime_UTR
AGCAGTTCTGCTTCCTCTCC+AGG 0.368676 7:+65337870 None:intergenic
CTTGTTAACATCTTCCAATT+CGG 0.369685 7:+65343235 None:intergenic
CAAGGAGAATGCTTCCAATA+AGG 0.369976 7:-65341209 MsG0780039529.01.T01:intron
GACTAACAAACTCTCCGAAT+TGG 0.379912 7:-65343249 MsG0780039529.01.T01:CDS
TTATCCACTGACTGTCAAAC+TGG 0.384280 7:-65340822 MsG0780039529.01.T01:CDS
AATGCACTTATCAATGCTAT+TGG 0.398878 7:-65337311 MsG0780039529.01.T01:three_prime_UTR
CTTCTGAAGGAAGGAACTTC+CGG 0.403959 7:-65341400 MsG0780039529.01.T01:CDS
GCAGGAGTGCTCTACTTCTA+AGG 0.404996 7:-65341031 MsG0780039529.01.T01:CDS
GTCACCCTTTCAAAGAATAT+GGG 0.439478 7:+65337762 None:intergenic
GTTACTCCTTCAGTATATCA+TGG 0.442874 7:-65337905 MsG0780039529.01.T01:CDS
GTAATGAATTAACTTCAGTT+AGG 0.445657 7:-65342973 MsG0780039529.01.T01:intron
AAATTCCTCAAATTTGTCTC+TGG 0.449362 7:-65343200 MsG0780039529.01.T01:intron
TCTAAGGCTAATGATCAATC+AGG 0.458281 7:-65341015 MsG0780039529.01.T01:intron
GCAGTTCTGCTTCCTCTCCA+GGG 0.466747 7:+65337871 None:intergenic
AAGAATATGGGGCACATGGT+TGG 0.471766 7:+65337774 None:intergenic
AAAACGTATGAGGCAGGAAC+AGG 0.482742 7:-65341314 MsG0780039529.01.T01:CDS
CAAATTGAAGTGGACACATT+GGG 0.486696 7:-65337526 MsG0780039529.01.T01:three_prime_UTR
GTGCCCCATATTCTTTGAAA+GGG 0.505330 7:-65337766 MsG0780039529.01.T01:CDS
TGGAGTATTGATGAGAAACT+AGG 0.507262 7:-65337620 MsG0780039529.01.T01:three_prime_UTR
CTATACCATGTTCTATCTCT+AGG 0.509430 7:-65337849 MsG0780039529.01.T01:CDS
CAATGCTATTGGTAAATACA+TGG 0.510776 7:-65337300 MsG0780039529.01.T01:three_prime_UTR
GATTAGCACCAGAATGGATG+AGG 0.514702 7:-65337815 MsG0780039529.01.T01:CDS
TGTGCCCCATATTCTTTGAA+AGG 0.521452 7:-65337767 MsG0780039529.01.T01:CDS
AATACTCCAAATAATTGAAG+TGG 0.521636 7:+65337634 None:intergenic
GAGGCAGGAACAGGATGCAT+TGG 0.522526 7:-65341305 MsG0780039529.01.T01:CDS
ATTTATAGGCTAAGCTTGAA+AGG 0.524522 7:+65337255 None:intergenic
ATCACTTTCTTGTGTATCAA+CGG 0.524742 7:+65340896 None:intergenic
TTTATACCATCTGAAAATGA+AGG 0.531763 7:-65341268 MsG0780039529.01.T01:CDS
ATTTCTGTTACTTAAATCAC+CGG 0.533318 7:+65341381 None:intergenic
CACTACACACTAAAATGACA+TGG 0.545829 7:+65337371 None:intergenic
TCTTATAGATGAGTTATTGG+AGG 0.545996 7:+65341345 None:intergenic
TCATGGATTAGCAGAGCCCC+TGG 0.546093 7:-65337888 MsG0780039529.01.T01:CDS
GGTTGCCAAAGACAATGAAC+TGG 0.546734 7:-65342454 MsG0780039529.01.T01:CDS
GAATGACAAGAAAACGTATG+AGG 0.548734 7:-65341324 MsG0780039529.01.T01:CDS
TTGAAAGATTAGCACCAGAA+TGG 0.549289 7:-65337821 MsG0780039529.01.T01:CDS
GCTTTGAGTCCAAATTGAAG+TGG 0.553377 7:-65337536 MsG0780039529.01.T01:three_prime_UTR
GACAAGAAAACGTATGAGGC+AGG 0.556312 7:-65341320 MsG0780039529.01.T01:CDS
ACAACAAAGCCATATCCAAA+AGG 0.558962 7:+65337669 None:intergenic
AAGCCATATCCAAAAGGTGG+AGG 0.559932 7:+65337675 None:intergenic
GAAGTTGCAAAAGCTTCTGA+AGG 0.569658 7:-65341413 MsG0780039529.01.T01:CDS
CCAAATTGAAGTGGACACAT+TGG 0.571152 7:-65337527 MsG0780039529.01.T01:three_prime_UTR
TTGCAAAAGCTTCTGAAGGA+AGG 0.573902 7:-65341409 MsG0780039529.01.T01:CDS
TAGTACCAGAGACAAATTTG+AGG 0.576550 7:+65343195 None:intergenic
TCGTCCAGTTTGACAGTCAG+TGG 0.577183 7:+65340818 None:intergenic
ATAGAAAATAACCTTAAACT+AGG 0.580005 7:+65337337 None:intergenic
ATGAACTGGTTGAACATCAA+AGG 0.581642 7:-65342440 MsG0780039529.01.T01:CDS
TTCAAAGAATATGGGGCACA+TGG 0.582147 7:+65337770 None:intergenic
CTCCAAATAATTGAAGTGGA+AGG 0.583053 7:+65337638 None:intergenic
TGAAAATGAAGGTAATTCTG+TGG 0.586128 7:-65341257 MsG0780039529.01.T01:CDS
GCTAATCCATGATATACTGA+AGG 0.589699 7:+65337899 None:intergenic
AAGAAGTAATAGATCACTTG+AGG 0.598230 7:-65343036 MsG0780039529.01.T01:CDS
CTCCAAATACACTACTCTCA+AGG 0.601722 7:-65343340 MsG0780039529.01.T01:intron
CGAATTGGAAGATGTTAACA+AGG 0.607782 7:-65343234 MsG0780039529.01.T01:CDS
GTCAACACGAAGCTTTCTCA+AGG 0.615618 7:-65341227 MsG0780039529.01.T01:CDS
CAGTTCTGCTTCCTCTCCAG+GGG 0.617514 7:+65337872 None:intergenic
TCTGCAATGCATCAATCAAG+TGG 0.617859 7:-65340786 MsG0780039529.01.T01:intron
ACAAAGCCATATCCAAAAGG+TGG 0.626651 7:+65337672 None:intergenic
GATTAGCAGAGCCCCTGGAG+AGG 0.632797 7:-65337883 MsG0780039529.01.T01:CDS
AGCCATATCCAAAAGGTGGA+GGG 0.636505 7:+65337676 None:intergenic
ATTAGCACCAGAATGGATGA+GGG 0.644055 7:-65337814 MsG0780039529.01.T01:CDS
TCACCCTTTCAAAGAATATG+GGG 0.651458 7:+65337763 None:intergenic
ATGCATTGGACATAGAAGCA+AGG 0.662443 7:-65341291 MsG0780039529.01.T01:CDS
GTTATCAATTTGAAACACTG+AGG 0.664501 7:-65337735 MsG0780039529.01.T01:exon
GAAACTAGGAATGAAACTTG+AGG 0.668280 7:-65337606 MsG0780039529.01.T01:three_prime_UTR
GTGTGCCTAGAGATAGAACA+TGG 0.680456 7:+65337844 None:intergenic
ATTGAAGTGGACACATTGGG+AGG 0.682316 7:-65337523 MsG0780039529.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATTAATCAAATTAATT+AGG + Chr7:65343002-65343021 None:intergenic 10.0%
!! TTTACAAAATAATAAAAAAG+GGG + Chr7:65337635-65337654 None:intergenic 10.0%
!!! AATTTTAATTATTTGCTTTT+GGG + Chr7:65338776-65338795 None:intergenic 10.0%
!!! ATATCAATTTTAAATAGATT+TGG - Chr7:65337945-65337964 MsG0780039529.01.T01:intron 10.0%
!!! ATTTGAAGAATTTTAAAATT+AGG + Chr7:65340311-65340330 None:intergenic 10.0%
!!! TAATTTTAATTATTTGCTTT+TGG + Chr7:65338777-65338796 None:intergenic 10.0%
!!! TTTGAAGAATTTTAAAATTA+GGG + Chr7:65340310-65340329 None:intergenic 10.0%
!! AAATAGTAATTATAAAATGG+CGG - Chr7:65338563-65338582 MsG0780039529.01.T01:intron 15.0%
!! AATTAAAATTATTGTCTTTC+AGG - Chr7:65338786-65338805 MsG0780039529.01.T01:intron 15.0%
!! ACTATTACTTTGTTAATATA+TGG - Chr7:65339987-65340006 MsG0780039529.01.T01:intron 15.0%
!! ATGGATATTAATTGAAAAAA+GGG - Chr7:65337660-65337679 MsG0780039529.01.T01:three_prime_UTR 15.0%
!! ATTTATAGAATTTAGAAATC+AGG - Chr7:65340177-65340196 MsG0780039529.01.T01:intron 15.0%
!! TATACTATTTGTAGATAATA+TGG - Chr7:65341230-65341249 MsG0780039529.01.T01:CDS 15.0%
!! TATGGATATTAATTGAAAAA+AGG - Chr7:65337659-65337678 MsG0780039529.01.T01:three_prime_UTR 15.0%
!! TTAATCACTAATAGTTATTT+AGG - Chr7:65337452-65337471 MsG0780039529.01.T01:three_prime_UTR 15.0%
!! TTACAAAATAATAAAAAAGG+GGG + Chr7:65337634-65337653 None:intergenic 15.0%
!! TTTATAGAATTTAGAAATCA+GGG - Chr7:65340178-65340197 MsG0780039529.01.T01:intron 15.0%
!!! ATTTAAGGAAATTTTTATTG+CGG - Chr7:65341548-65341567 MsG0780039529.01.T01:intron 15.0%
!!! ATTTTAATTATTTGCTTTTG+GGG + Chr7:65338775-65338794 None:intergenic 15.0%
!!! CAATTTTAAAATCTTTCAAA+TGG + Chr7:65341022-65341041 None:intergenic 15.0%
!!! CCATTTTATAATTACTATTT+GGG + Chr7:65338563-65338582 None:intergenic 15.0%
!!! GTTTCATTTTATTATTTTGA+TGG - Chr7:65339461-65339480 MsG0780039529.01.T01:intron 15.0%
!!! TATAAATTTTAAACATCTCA+TGG + Chr7:65340164-65340183 None:intergenic 15.0%
!!! TATTTCGTTTTGTTTTATTT+TGG - Chr7:65340463-65340482 MsG0780039529.01.T01:intron 15.0%
!!! TATTTCGTTTTGTTTTATTT+TGG + Chr7:65340482-65340463 None:intergenic 15.0%
!!! TTTTTATGTTTGAATGATTT+CGG - Chr7:65338367-65338386 MsG0780039529.01.T01:intron 15.0%
!!! TTTTTTTTTTGGTTTATTTG+TGG - Chr7:65338006-65338025 MsG0780039529.01.T01:intron 15.0%
!! AAAATAAGAGGATGAAATAT+TGG + Chr7:65342177-65342196 None:intergenic 20.0%
!! AAAATTTCCTTAAATATGAC+TGG + Chr7:65341543-65341562 None:intergenic 20.0%
!! AAACATGATATAAATGCTTA+AGG + Chr7:65339071-65339090 None:intergenic 20.0%
!! AACAAAAAGTGATCATATTA+AGG + Chr7:65339499-65339518 None:intergenic 20.0%
!! AATAGTAATTATAAAATGGC+GGG - Chr7:65338564-65338583 MsG0780039529.01.T01:intron 20.0%
!! AATTGGGAAATATAAACTAT+TGG - Chr7:65341468-65341487 MsG0780039529.01.T01:intron 20.0%
!! AGTCTTACATTGATATTTAT+AGG + Chr7:65343322-65343341 None:intergenic 20.0%
!! ATAGAAAATAACCTTAAACT+AGG + Chr7:65343226-65343245 None:intergenic 20.0%
!! ATATGTATTGTAAGTTTAGT+AGG - Chr7:65341354-65341373 MsG0780039529.01.T01:CDS 20.0%
!! CCCAAATAGTAATTATAAAA+TGG - Chr7:65338560-65338579 MsG0780039529.01.T01:intron 20.0%
!! CTATTACAATTGATATTTCA+TGG + Chr7:65341086-65341105 None:intergenic 20.0%
!! GACTAAGAAATAATAAGAAA+AGG + Chr7:65339864-65339883 None:intergenic 20.0%
!! TCTAGAAAATTACTAAGATT+TGG - Chr7:65340865-65340884 MsG0780039529.01.T01:CDS 20.0%
!! TCTAGAAAATTACTAAGATT+TGG + Chr7:65340884-65340865 None:intergenic 20.0%
!! TTAAAGGACTTAGATTTAAA+TGG - Chr7:65341889-65341908 MsG0780039529.01.T01:intron 20.0%
!! TTGAATTAAAGCAAATTGTA+TGG + Chr7:65340030-65340049 None:intergenic 20.0%
!! TTTAAAAAGAAAAAAGAGAC+AGG + Chr7:65342200-65342219 None:intergenic 20.0%
!! TTTATCATATGAACTTATGT+AGG - Chr7:65338959-65338978 MsG0780039529.01.T01:intron 20.0%
!!! AAAGATTTTCTTACTACTAT+AGG - Chr7:65341150-65341169 MsG0780039529.01.T01:intron 20.0%
!!! ATTTATATCATGTTTTACTG+AGG - Chr7:65339076-65339095 MsG0780039529.01.T01:intron 20.0%
!!! ATTTTTTTGGAAATAGTATC+CGG + Chr7:65337921-65337940 None:intergenic 20.0%
!!! GCCATTTTATAATTACTATT+TGG + Chr7:65338564-65338583 None:intergenic 20.0%
!!! TATACAAACAATATCGATTT+GGG - Chr7:65337696-65337715 MsG0780039529.01.T01:three_prime_UTR 20.0%
!!! TCTTTTTAAAACAGTTGTAT+GGG - Chr7:65342210-65342229 MsG0780039529.01.T01:intron 20.0%
!!! TGAAAGATTTTAAAATTGAC+AGG - Chr7:65341024-65341043 MsG0780039529.01.T01:CDS 20.0%
!!! TTAGTTACTTCTCTTATTTT+TGG - Chr7:65338881-65338900 MsG0780039529.01.T01:intron 20.0%
!!! TTATACAAACAATATCGATT+TGG - Chr7:65337695-65337714 MsG0780039529.01.T01:three_prime_UTR 20.0%
!!! TTCTTTTTAAAACAGTTGTA+TGG - Chr7:65342209-65342228 MsG0780039529.01.T01:intron 20.0%
!!! TTTAAGGAAATTTTTATTGC+GGG - Chr7:65341549-65341568 MsG0780039529.01.T01:intron 20.0%
!!! TTTTCTATATTGTGTTAATC+TGG - Chr7:65339933-65339952 MsG0780039529.01.T01:intron 20.0%
! AAAATGATACATAAGCTGAT+TGG + Chr7:65342289-65342308 None:intergenic 25.0%
! AACATTATAACATCAAGAGA+TGG - Chr7:65342386-65342405 MsG0780039529.01.T01:intron 25.0%
! AAGAAAGTGATCATAAAAAC+TGG - Chr7:65339676-65339695 MsG0780039529.01.T01:intron 25.0%
! AATACTCCAAATAATTGAAG+TGG + Chr7:65342929-65342948 None:intergenic 25.0%
! ACCCATCATACAAATTAATT+GGG - Chr7:65341452-65341471 MsG0780039529.01.T01:intron 25.0%
! AGAATTCATTTCCTAGTTTA+AGG - Chr7:65343212-65343231 MsG0780039529.01.T01:CDS 25.0%
! ATAAACTATTGGATTCAAGT+GGG - Chr7:65341479-65341498 MsG0780039529.01.T01:intron 25.0%
! ATATAAATGCTTAAGGACAA+AGG + Chr7:65339064-65339083 None:intergenic 25.0%
! ATCAAACAAGAATCTAGTAT+AGG + Chr7:65342520-65342539 None:intergenic 25.0%
! ATCATGTCTATAGTATGTTT+AGG + Chr7:65341870-65341889 None:intergenic 25.0%
! CAATTGATATTTCATGGTAT+TGG + Chr7:65341080-65341099 None:intergenic 25.0%
! CAATTGTTAACTGAAAAACA+TGG + Chr7:65339895-65339914 None:intergenic 25.0%
! CATACTATAGACATGATTAA+AGG - Chr7:65341873-65341892 MsG0780039529.01.T01:intron 25.0%
! CATTCTTATAGATGAGTTAT+TGG + Chr7:65339221-65339240 None:intergenic 25.0%
! CTATTGAAAACCATATCTAA+AGG + Chr7:65341919-65341938 None:intergenic 25.0%
! CTTACAAGATCTTAGTTTAT+TGG - Chr7:65338267-65338286 MsG0780039529.01.T01:intron 25.0%
! CTTGGACAAATTAATGATTT+GGG - Chr7:65337565-65337584 MsG0780039529.01.T01:three_prime_UTR 25.0%
! GTAATGAATTAACTTCAGTT+AGG - Chr7:65337587-65337606 MsG0780039529.01.T01:three_prime_UTR 25.0%
! GTTTACTGAACTGAATAAAA+GGG + Chr7:65342481-65342500 None:intergenic 25.0%
! TACATGTGAATTGTTTCAAT+GGG - Chr7:65339599-65339618 MsG0780039529.01.T01:intron 25.0%
! TATAAACTATTGGATTCAAG+TGG - Chr7:65341478-65341497 MsG0780039529.01.T01:intron 25.0%
! TATGTAGGAATCTTTATTCT+AGG - Chr7:65338974-65338993 MsG0780039529.01.T01:intron 25.0%
! TCTAGTTAGGTTACATTAAT+GGG - Chr7:65340138-65340157 MsG0780039529.01.T01:intron 25.0%
! TCTCTTATTGTCTTTATGAT+AGG - Chr7:65342633-65342652 MsG0780039529.01.T01:intron 25.0%
! TCTTGGACAAATTAATGATT+TGG - Chr7:65337564-65337583 MsG0780039529.01.T01:three_prime_UTR 25.0%
! TGTTTACTGAACTGAATAAA+AGG + Chr7:65342482-65342501 None:intergenic 25.0%
! TTACATGTGAATTGTTTCAA+TGG - Chr7:65339598-65339617 MsG0780039529.01.T01:intron 25.0%
! TTTACTGAACTGAATAAAAG+GGG + Chr7:65342480-65342499 None:intergenic 25.0%
! TTTATACCATCTGAAAATGA+AGG - Chr7:65339292-65339311 MsG0780039529.01.T01:intron 25.0%
! TTTCATTTAACAGGAGAAAA+AGG - Chr7:65341328-65341347 MsG0780039529.01.T01:CDS 25.0%
!! AAAGCTCGTTCTATATTTTT+AGG - Chr7:65338426-65338445 MsG0780039529.01.T01:intron 25.0%
!! AAATGGTTTTCCTTTAGATA+TGG - Chr7:65341906-65341925 MsG0780039529.01.T01:intron 25.0%
!! AATCAGCTTATGTATCATTT+TGG - Chr7:65342288-65342307 MsG0780039529.01.T01:intron 25.0%
!! AATGTGTTTGAGATGAAATT+TGG - Chr7:65341714-65341733 MsG0780039529.01.T01:intron 25.0%
!! AATTTGGTTAATCCCTATTT+TGG - Chr7:65341730-65341749 MsG0780039529.01.T01:intron 25.0%
!! AGTAGTAAGAAAATCTTTTG+TGG + Chr7:65341148-65341167 None:intergenic 25.0%
!! ATTTCTGTTACTTAAATCAC+CGG + Chr7:65339182-65339201 None:intergenic 25.0%
!! CTTGTGATTTTTCATTTAAC+AGG - Chr7:65341319-65341338 MsG0780039529.01.T01:CDS 25.0%
!! CTTTAGATATGGTTTTCAAT+AGG - Chr7:65341917-65341936 MsG0780039529.01.T01:intron 25.0%
!! TACTAGATTCTTGTTTGATT+TGG - Chr7:65342521-65342540 MsG0780039529.01.T01:intron 25.0%
!! TGGGTATTATGATTCAATTT+TGG - Chr7:65337715-65337734 MsG0780039529.01.T01:three_prime_UTR 25.0%
!!! AAACTTGTTCTTTTCTATCT+AGG - Chr7:65340661-65340680 MsG0780039529.01.T01:intron 25.0%
!!! AAATTTGTTTTTCTCATCCA+GGG - Chr7:65338085-65338104 MsG0780039529.01.T01:intron 25.0%
!!! ATTTTTCAACGAGATATTCA+TGG - Chr7:65338715-65338734 MsG0780039529.01.T01:intron 25.0%
!!! TAAATTTGTTTTTCTCATCC+AGG - Chr7:65338084-65338103 MsG0780039529.01.T01:intron 25.0%
!!! TACTCTTTTTGAGTATACAT+TGG - Chr7:65339707-65339726 MsG0780039529.01.T01:intron 25.0%
!!! TCATGGCTTTAAATTTTCAT+CGG - Chr7:65342857-65342876 MsG0780039529.01.T01:intron 25.0%
!!! TCCCAATTAATTTGTATGAT+GGG + Chr7:65341456-65341475 None:intergenic 25.0%
!!! TGAAAGATTGTTTTTTGACT+TGG - Chr7:65338237-65338256 MsG0780039529.01.T01:intron 25.0%
!!! TGTAAGACTTCACTTTTAAT+CGG - Chr7:65343333-65343352 MsG0780039529.01.T01:intron 25.0%
!!! TTCCCAATTAATTTGTATGA+TGG + Chr7:65341457-65341476 None:intergenic 25.0%
!!! TTTTTCAGTTAACAATTGTC+TGG - Chr7:65339897-65339916 MsG0780039529.01.T01:intron 25.0%
!!! TTTTTTTGGTTTATTTGTGG+TGG - Chr7:65338009-65338028 MsG0780039529.01.T01:intron 25.0%
AAAAGAGACAGGAAAATAAG+AGG + Chr7:65342189-65342208 None:intergenic 30.0%
AAATATTGGATGAACAGAAG+AGG + Chr7:65342163-65342182 None:intergenic 30.0%
AAATTCCTCAAATTTGTCTC+TGG - Chr7:65337360-65337379 MsG0780039529.01.T01:three_prime_UTR 30.0%
AACATTTCATTACAAGTGCT+TGG - Chr7:65342600-65342619 MsG0780039529.01.T01:intron 30.0%
AAGAAGTAATAGATCACTTG+AGG - Chr7:65337524-65337543 MsG0780039529.01.T01:three_prime_UTR 30.0%
AAGATCTTAGTTTATTGGCA+TGG - Chr7:65338272-65338291 MsG0780039529.01.T01:intron 30.0%
AATAGTATACATCATGACAG+TGG + Chr7:65341219-65341238 None:intergenic 30.0%
AATGCACTTATCAATGCTAT+TGG - Chr7:65343249-65343268 MsG0780039529.01.T01:CDS 30.0%
ACAATAAAATGTAGCAGAGA+AGG + Chr7:65342551-65342570 None:intergenic 30.0%
ACATGTGAATTGTTTCAATG+GGG - Chr7:65339600-65339619 MsG0780039529.01.T01:intron 30.0%
ACTGAAAATGATAAGCTTCT+TGG - Chr7:65337547-65337566 MsG0780039529.01.T01:three_prime_UTR 30.0%
AGATCTTGCGGTTTATATAT+TGG - Chr7:65341429-65341448 MsG0780039529.01.T01:CDS 30.0%
ATATATTGATGCAAGAGAAG+TGG - Chr7:65340956-65340975 MsG0780039529.01.T01:intron 30.0%
ATCACTTTCTTGTGTATCAA+CGG + Chr7:65339667-65339686 None:intergenic 30.0%
ATGTGCTTATGTCAGTAATA+TGG - Chr7:65338669-65338688 MsG0780039529.01.T01:intron 30.0%
ATTCAAACAAACCCAATCAA+GGG - Chr7:65342076-65342095 MsG0780039529.01.T01:intron 30.0%
ATTTATAGGCTAAGCTTGAA+AGG + Chr7:65343308-65343327 None:intergenic 30.0%
CAAATTTAGATGCTCTAGTT+AGG - Chr7:65340125-65340144 MsG0780039529.01.T01:intron 30.0%
CAATGCTATTGGTAAATACA+TGG - Chr7:65343260-65343279 MsG0780039529.01.T01:intron 30.0%
CGACAAACCTATCAAAATAA+GGG - Chr7:65340699-65340718 MsG0780039529.01.T01:intron 30.0%
CGACAAACCTATCAAAATAA+GGG + Chr7:65340718-65340699 None:intergenic 30.0%
CTAAAGATTTGAAGACAAGT+TGG - Chr7:65341292-65341311 MsG0780039529.01.T01:CDS 30.0%
CTCTAGTTAGGTTACATTAA+TGG - Chr7:65340137-65340156 MsG0780039529.01.T01:intron 30.0%
CTTGTTAACATCTTCCAATT+CGG + Chr7:65337328-65337347 None:intergenic 30.0%
GAATATCTCGTTGAAAAATC+AGG + Chr7:65338714-65338733 None:intergenic 30.0%
GACCCATCATACAAATTAAT+TGG - Chr7:65341451-65341470 MsG0780039529.01.T01:intron 30.0%
GATATATGCAGACAAAAAAG+AGG + Chr7:65342111-65342130 None:intergenic 30.0%
GCAAATATATTCCGATTTCA+GGG + Chr7:65339390-65339409 None:intergenic 30.0%
GCTATATAACTAGTCAATGT+GGG + Chr7:65338541-65338560 None:intergenic 30.0%
GCTTTAATTCAACATTATCC+TGG - Chr7:65340038-65340057 MsG0780039529.01.T01:intron 30.0%
GTATACTAATTCTTGTGTAG+AGG - Chr7:65341386-65341405 MsG0780039529.01.T01:CDS 30.0%
TAAAACGTGCTCGTTAAAAA+GGG - Chr7:65340356-65340375 MsG0780039529.01.T01:intron 30.0%
TAACTTATGACCTCTGAATT+TGG + Chr7:65338637-65338656 None:intergenic 30.0%
TATATAAACCGCAAGATCTA+TGG + Chr7:65341428-65341447 None:intergenic 30.0%
TCAGTTCAGTAAACAATTCA+TGG - Chr7:65342487-65342506 MsG0780039529.01.T01:intron 30.0%
TCATATGATAAAGATCAACC+AGG + Chr7:65338951-65338970 None:intergenic 30.0%
TCTTATAGATGAGTTATTGG+AGG + Chr7:65339218-65339237 None:intergenic 30.0%
TGAAAATGAAGGTAATTCTG+TGG - Chr7:65339303-65339322 MsG0780039529.01.T01:intron 30.0%
TGCAAATATATTCCGATTTC+AGG + Chr7:65339391-65339410 None:intergenic 30.0%
TGTGTTAATCTGGTTATGTT+GGG - Chr7:65339943-65339962 MsG0780039529.01.T01:intron 30.0%
TTACTGAACTGAATAAAAGG+GGG + Chr7:65342479-65342498 None:intergenic 30.0%
TTCCTTCCACTTCAATTATT+TGG - Chr7:65342920-65342939 MsG0780039529.01.T01:intron 30.0%
TTGAACTTATGATCTTAGAG+AGG + Chr7:65337782-65337801 None:intergenic 30.0%
TTGTAAGTTTAGTAGGAACT+AGG - Chr7:65341361-65341380 MsG0780039529.01.T01:CDS 30.0%
TTGTGTTAATCTGGTTATGT+TGG - Chr7:65339942-65339961 MsG0780039529.01.T01:intron 30.0%
TTTGGTTAAGTCCTTATTAG+AGG - Chr7:65338899-65338918 MsG0780039529.01.T01:intron 30.0%
! AAATGGATTCAATCATAACC+TGG + Chr7:65341005-65341024 None:intergenic 30.0%
! ATCATGTTTTACTGAGGATT+TGG - Chr7:65339082-65339101 MsG0780039529.01.T01:intron 30.0%
! ATGCTCTAAATGTCTAATCT+TGG - Chr7:65338492-65338511 MsG0780039529.01.T01:intron 30.0%
! GAATTACCTTCATTTTCAGA+TGG + Chr7:65339301-65339320 None:intergenic 30.0%
! GGGAAGAATTTTATGCAATT+TGG - Chr7:65343360-65343379 MsG0780039529.01.T01:CDS 30.0%
! GTGTTATGATTTGTGAATGT+AGG - Chr7:65339020-65339039 MsG0780039529.01.T01:intron 30.0%
! GTTATCAATTTGAAACACTG+AGG - Chr7:65342825-65342844 MsG0780039529.01.T01:intron 30.0%
! TGAACATCAAAGGCTTTTAT+TGG - Chr7:65338130-65338149 MsG0780039529.01.T01:intron 30.0%
! TGCTCTAAATGTCTAATCTT+GGG - Chr7:65338493-65338512 MsG0780039529.01.T01:intron 30.0%
! TTGGTGTATCTGAATGTTTT+GGG - Chr7:65337964-65337983 MsG0780039529.01.T01:intron 30.0%
!! AAAAGCACCAGTCATATTTA+AGG - Chr7:65341533-65341552 MsG0780039529.01.T01:intron 30.0%
!! AATCCCTATTTTGGAAAAGA+TGG - Chr7:65341739-65341758 MsG0780039529.01.T01:intron 30.0%
!! AGATTCTTGTTTGATTTGGA+GGG - Chr7:65342525-65342544 MsG0780039529.01.T01:intron 30.0%
!! ATTATGATTCAATTTTGGCC+CGG - Chr7:65337720-65337739 MsG0780039529.01.T01:exon 30.0%
!! GTTAAAAAGGGTTTTGATGT+AGG - Chr7:65340368-65340387 MsG0780039529.01.T01:intron 30.0%
!! TAATTATTTGCTTTTGGGGA+TGG + Chr7:65338771-65338790 None:intergenic 30.0%
!! TAGATTCTTGTTTGATTTGG+AGG - Chr7:65342524-65342543 MsG0780039529.01.T01:intron 30.0%
!! TTTGGTGTATCTGAATGTTT+TGG - Chr7:65337963-65337982 MsG0780039529.01.T01:intron 30.0%
!!! CTTTTTGTTGTTTTCATTGC+TGG - Chr7:65341990-65342009 MsG0780039529.01.T01:intron 30.0%
!!! TCACTTTTTGTTGTGAAAAG+CGG - Chr7:65339507-65339526 MsG0780039529.01.T01:intron 30.0%
!!! TTTTGTTTTATTTTGGCCCA+CGG - Chr7:65340470-65340489 MsG0780039529.01.T01:intron 30.0%
!!! TTTTGTTTTATTTTGGCCCA+CGG + Chr7:65340489-65340470 None:intergenic 30.0%
AAAAGCCATTTCTCAATAGC+TGG + Chr7:65341975-65341994 None:intergenic 35.0%
AAACTGTTATAGGTCAAAGG+AGG - Chr7:65341844-65341863 MsG0780039529.01.T01:intron 35.0%
AAATTGACAGGACCATAACT+TGG - Chr7:65341036-65341055 MsG0780039529.01.T01:CDS 35.0%
AACCTTGAGAGTAGTGTATT+TGG + Chr7:65337225-65337244 None:intergenic 35.0%
ACAACAAAGCCATATCCAAA+AGG + Chr7:65342894-65342913 None:intergenic 35.0%
ACACATGCTCAAACTACATA+AGG + Chr7:65341775-65341794 None:intergenic 35.0%
AGCGACAAACTTGTGAAAAT+AGG + Chr7:65340638-65340657 None:intergenic 35.0%
AGGAATTAGAACCCTGAAAT+CGG - Chr7:65339376-65339395 MsG0780039529.01.T01:intron 35.0%
ATGAACTGGTTGAACATCAA+AGG - Chr7:65338120-65338139 MsG0780039529.01.T01:intron 35.0%
ATTCAACATTATCCTGGCAA+TGG - Chr7:65340044-65340063 MsG0780039529.01.T01:intron 35.0%
ATTCTTGTGTAGAGGTGAAT+TGG - Chr7:65341394-65341413 MsG0780039529.01.T01:CDS 35.0%
ATTGAATGTGTAGTGGTAGA+GGG - Chr7:65341606-65341625 MsG0780039529.01.T01:intron 35.0%
ATTGCTGGTAGAAATGCAAT+TGG - Chr7:65342005-65342024 MsG0780039529.01.T01:intron 35.0%
ATTGGCAAATCATTATGCCT+CGG - Chr7:65342023-65342042 MsG0780039529.01.T01:intron 35.0%
CAAATTGAAGTGGACACATT+GGG - Chr7:65343034-65343053 MsG0780039529.01.T01:CDS 35.0%
CACTACACACTAAAATGACA+TGG + Chr7:65343192-65343211 None:intergenic 35.0%
CATAACTTGGCACTTGAAAA+TGG - Chr7:65341049-65341068 MsG0780039529.01.T01:CDS 35.0%
CATTCAAACAAACCCAATCA+AGG - Chr7:65342075-65342094 MsG0780039529.01.T01:intron 35.0%
CATTGGCAGAATAAATAGGA+TGG - Chr7:65341816-65341835 MsG0780039529.01.T01:intron 35.0%
CCTATCAAAATAAGGGTTTC+CGG - Chr7:65340706-65340725 MsG0780039529.01.T01:intron 35.0%
CCTATCAAAATAAGGGTTTC+CGG + Chr7:65340725-65340706 None:intergenic 35.0%
CGAATTGGAAGATGTTAACA+AGG - Chr7:65337326-65337345 MsG0780039529.01.T01:three_prime_UTR 35.0%
CTATACCATGTTCTATCTCT+AGG - Chr7:65342711-65342730 MsG0780039529.01.T01:intron 35.0%
CTCCAAATAATTGAAGTGGA+AGG + Chr7:65342925-65342944 None:intergenic 35.0%
GAAACTAGGAATGAAACTTG+AGG - Chr7:65342954-65342973 MsG0780039529.01.T01:intron 35.0%
GAAAGAAATAACAAACCCGT+GGG - Chr7:65340807-65340826 MsG0780039529.01.T01:CDS 35.0%
GAAAGAAATAACAAACCCGT+GGG + Chr7:65340826-65340807 None:intergenic 35.0%
GAATGACAAGAAAACGTATG+AGG - Chr7:65339236-65339255 MsG0780039529.01.T01:intron 35.0%
GCGACAAACCTATCAAAATA+AGG - Chr7:65340698-65340717 MsG0780039529.01.T01:intron 35.0%
GCGACAAACCTATCAAAATA+AGG + Chr7:65340717-65340698 None:intergenic 35.0%
GCGACAAACTTGTGAAAATA+GGG + Chr7:65340637-65340656 None:intergenic 35.0%
GCTAATCCATGATATACTGA+AGG + Chr7:65342664-65342683 None:intergenic 35.0%
GGCTAATTGAGTTAAAGAAC+TGG + Chr7:65341198-65341217 None:intergenic 35.0%
GGCTATATAACTAGTCAATG+TGG + Chr7:65338542-65338561 None:intergenic 35.0%
GGTAAACTGTTATAGGTCAA+AGG - Chr7:65341841-65341860 MsG0780039529.01.T01:intron 35.0%
GTAAAACGTGCTCGTTAAAA+AGG - Chr7:65340355-65340374 MsG0780039529.01.T01:intron 35.0%
GTATGAGATTGAATGTGTAG+TGG - Chr7:65341599-65341618 MsG0780039529.01.T01:intron 35.0%
GTCACCCTTTCAAAGAATAT+GGG + Chr7:65342801-65342820 None:intergenic 35.0%
GTTACTCCTTCAGTATATCA+TGG - Chr7:65342655-65342674 MsG0780039529.01.T01:intron 35.0%
GTTCAAAAGACCAAATTCAG+AGG - Chr7:65338624-65338643 MsG0780039529.01.T01:intron 35.0%
GTTCTAATTCCTCACCTTAT+TGG + Chr7:65339368-65339387 None:intergenic 35.0%
TACTGAACTGAATAAAAGGG+GGG + Chr7:65342478-65342497 None:intergenic 35.0%
TAGTACCAGAGACAAATTTG+AGG + Chr7:65337368-65337387 None:intergenic 35.0%
TCAACGTGCTAACAATTCTT+GGG - Chr7:65337798-65337817 MsG0780039529.01.T01:CDS 35.0%
TCACCCTTTCAAAGAATATG+GGG + Chr7:65342800-65342819 None:intergenic 35.0%
TCCTATTTATTCTGCCAATG+AGG + Chr7:65341816-65341835 None:intergenic 35.0%
TGAAAGAAATAACAAACCCG+TGG - Chr7:65340806-65340825 MsG0780039529.01.T01:CDS 35.0%
TGAAAGAAATAACAAACCCG+TGG + Chr7:65340825-65340806 None:intergenic 35.0%
TGAATGATTTCGGATGAGTT+AGG - Chr7:65338377-65338396 MsG0780039529.01.T01:intron 35.0%
TTAAGTCCTTATTAGAGGCA+AGG - Chr7:65338904-65338923 MsG0780039529.01.T01:intron 35.0%
TTAATCTGGTTATGTTGGGA+AGG - Chr7:65339947-65339966 MsG0780039529.01.T01:intron 35.0%
TTATGTAGTTTGAGCATGTG+TGG - Chr7:65341774-65341793 MsG0780039529.01.T01:intron 35.0%
TTCAACCAGTTCATTGTCTT+TGG + Chr7:65338114-65338133 None:intergenic 35.0%
TTCAACGTGCTAACAATTCT+TGG - Chr7:65337797-65337816 MsG0780039529.01.T01:CDS 35.0%
TTGAAAGATTAGCACCAGAA+TGG - Chr7:65342739-65342758 MsG0780039529.01.T01:intron 35.0%
TTGATCAGTCCATACATACA+GGG - Chr7:65337822-65337841 MsG0780039529.01.T01:CDS 35.0%
TTTGATCAGTCCATACATAC+AGG - Chr7:65337821-65337840 MsG0780039529.01.T01:CDS 35.0%
! AATCAAAAAGTGTGCCTCTT+AGG + Chr7:65340536-65340555 None:intergenic 35.0%
! ACATCAAAGGCTTTTATTGG+AGG - Chr7:65338133-65338152 MsG0780039529.01.T01:intron 35.0%
! AGATTTTCTCTCAATTCTGG+TGG - Chr7:65340571-65340590 MsG0780039529.01.T01:intron 35.0%
! AGATTTTCTCTCAATTCTGG+TGG + Chr7:65340590-65340571 None:intergenic 35.0%
! AGGATTTGGTTGTCAACATT+TGG - Chr7:65339096-65339115 MsG0780039529.01.T01:intron 35.0%
! CCACCATCTTTTCCAAAATA+GGG + Chr7:65341745-65341764 None:intergenic 35.0%
! GTTAGTCTGCGAGAATAAAT+AGG + Chr7:65337298-65337317 None:intergenic 35.0%
! TCCACCATCTTTTCCAAAAT+AGG + Chr7:65341746-65341765 None:intergenic 35.0%
! TCGAGATTTTCTCTCAATTC+TGG - Chr7:65340568-65340587 MsG0780039529.01.T01:intron 35.0%
! TCGAGATTTTCTCTCAATTC+TGG + Chr7:65340587-65340568 None:intergenic 35.0%
! TCTAAGGCTAATGATCAATC+AGG - Chr7:65339545-65339564 MsG0780039529.01.T01:intron 35.0%
! TGGTGTATCTGAATGTTTTG+GGG - Chr7:65337965-65337984 MsG0780039529.01.T01:intron 35.0%
!! AAAAAGGGTTTTGATGTAGG+AGG - Chr7:65340371-65340390 MsG0780039529.01.T01:intron 35.0%
!! AAAAGGGTTTTGATGTAGGA+GGG - Chr7:65340372-65340391 MsG0780039529.01.T01:intron 35.0%
!! ACTTCACTTTTAATCGGTCA+AGG - Chr7:65343339-65343358 MsG0780039529.01.T01:intron 35.0%
!! ATTAATTTGCGTTACAGCTG+CGG - Chr7:65337501-65337520 MsG0780039529.01.T01:three_prime_UTR 35.0%
!! CTTCACTTTTAATCGGTCAA+GGG - Chr7:65343340-65343359 MsG0780039529.01.T01:intron 35.0%
!! TGGAGTATTGATGAGAAACT+AGG - Chr7:65342940-65342959 MsG0780039529.01.T01:intron 35.0%
!!! CATTTTCAAGTGCCAAGTTA+TGG + Chr7:65341051-65341070 None:intergenic 35.0%
!!! TTTGTTTTATTTTGGCCCAC+GGG - Chr7:65340471-65340490 MsG0780039529.01.T01:intron 35.0%
!!! TTTGTTTTATTTTGGCCCAC+GGG + Chr7:65340490-65340471 None:intergenic 35.0%
!!! TTTTGGTTTATTTGTGGTGG+TGG - Chr7:65338012-65338031 MsG0780039529.01.T01:intron 35.0%
AAACCGCAAGATCTATGGAA+TGG + Chr7:65341423-65341442 None:intergenic 40.0%
ACAAAGCCATATCCAAAAGG+TGG + Chr7:65342891-65342910 None:intergenic 40.0%
ACGGCTGTTAAACACAATGA+AGG + Chr7:65339648-65339667 None:intergenic 40.0%
ACTATTGGATTCAAGTGGGA+TGG - Chr7:65341483-65341502 MsG0780039529.01.T01:intron 40.0%
ACTTATGTTTGCAGCCAGTA+GGG - Chr7:65342047-65342066 MsG0780039529.01.T01:intron 40.0%
AGAATGCTTCCAATAAGGTG+AGG - Chr7:65339356-65339375 MsG0780039529.01.T01:intron 40.0%
AGACCATTCCATAGATCTTG+CGG - Chr7:65341417-65341436 MsG0780039529.01.T01:CDS 40.0%
AGAGAAGTGGCAAATGGAAA+TGG - Chr7:65340969-65340988 MsG0780039529.01.T01:intron 40.0%
AGGAATTTGGAAGATGTGCA+AGG + Chr7:65342143-65342162 None:intergenic 40.0%
AGGCTAATGATCAATCAGGT+TGG - Chr7:65339549-65339568 MsG0780039529.01.T01:intron 40.0%
ATAGTATGCTCAAGCATGAC+TGG - Chr7:65341102-65341121 MsG0780039529.01.T01:CDS 40.0%
ATGCATTGGACATAGAAGCA+AGG - Chr7:65339269-65339288 MsG0780039529.01.T01:intron 40.0%
ATTAGCACCAGAATGGATGA+GGG - Chr7:65342746-65342765 MsG0780039529.01.T01:intron 40.0%
CAACCAGGTAGTCATCATAA+TGG + Chr7:65338936-65338955 None:intergenic 40.0%
CAACTCCAGCTATTGAGAAA+TGG - Chr7:65341967-65341986 MsG0780039529.01.T01:intron 40.0%
CAAGGAGAATGCTTCCAATA+AGG - Chr7:65339351-65339370 MsG0780039529.01.T01:intron 40.0%
CATTTCTCAATAGCTGGAGT+TGG + Chr7:65341969-65341988 None:intergenic 40.0%
CCAAATTGAAGTGGACACAT+TGG - Chr7:65343033-65343052 MsG0780039529.01.T01:CDS 40.0%
CCAATGTGTCCACTTCAATT+TGG + Chr7:65343036-65343055 None:intergenic 40.0%
CGTCACCCTTTCAAAGAATA+TGG + Chr7:65342802-65342821 None:intergenic 40.0%
CTCCAAATACACTACTCTCA+AGG - Chr7:65337220-65337239 MsG0780039529.01.T01:three_prime_UTR 40.0%
CTTATGATCTTAGAGAGGAG+AGG + Chr7:65337777-65337796 None:intergenic 40.0%
CTTTGATACCATCAGAAGCT+GGG + Chr7:65338410-65338429 None:intergenic 40.0%
GAAGTTGCAAAAGCTTCTGA+AGG - Chr7:65339147-65339166 MsG0780039529.01.T01:intron 40.0%
GACTAACAAACTCTCCGAAT+TGG - Chr7:65337311-65337330 MsG0780039529.01.T01:three_prime_UTR 40.0%
GATGGAGGGTAAACTGTTAT+AGG - Chr7:65341834-65341853 MsG0780039529.01.T01:intron 40.0%
GATTGAATGTGTAGTGGTAG+AGG - Chr7:65341605-65341624 MsG0780039529.01.T01:intron 40.0%
GCCTCATTGGCAGAATAAAT+AGG - Chr7:65341812-65341831 MsG0780039529.01.T01:intron 40.0%
GGATGAACAGAAGAGGAATT+TGG + Chr7:65342156-65342175 None:intergenic 40.0%
GGCAGAATAAATAGGATGGA+GGG - Chr7:65341820-65341839 MsG0780039529.01.T01:intron 40.0%
GTGCATGACACGATATGATT+AGG - Chr7:65341686-65341705 MsG0780039529.01.T01:intron 40.0%
GTTTATTGGCATGGTGATCA+CGG - Chr7:65338281-65338300 MsG0780039529.01.T01:intron 40.0%
GTTTGAATGTTCAACCCTAC+TGG + Chr7:65342064-65342083 None:intergenic 40.0%
TCTCCATTATGATGACTACC+TGG - Chr7:65338930-65338949 MsG0780039529.01.T01:intron 40.0%
TCTGCAATGCATCAATCAAG+TGG - Chr7:65339774-65339793 MsG0780039529.01.T01:intron 40.0%
TGAATAAAAGGGGGGAAAGA+GGG + Chr7:65342470-65342489 None:intergenic 40.0%
TGGCAGAATAAATAGGATGG+AGG - Chr7:65341819-65341838 MsG0780039529.01.T01:intron 40.0%
TGTGCCCCATATTCTTTGAA+AGG - Chr7:65342793-65342812 MsG0780039529.01.T01:intron 40.0%
TTCAAAGAATATGGGGCACA+TGG + Chr7:65342793-65342812 None:intergenic 40.0%
TTTATTGGCATGGTGATCAC+GGG - Chr7:65338282-65338301 MsG0780039529.01.T01:intron 40.0%
! CACTGAGGTTTCTCTTTTCA+TGG - Chr7:65342840-65342859 MsG0780039529.01.T01:intron 40.0%
! GAGACTCTCAATCTTTTCTG+TGG - Chr7:65338170-65338189 MsG0780039529.01.T01:intron 40.0%
! GCTTTGAGTCCAAATTGAAG+TGG - Chr7:65343024-65343043 MsG0780039529.01.T01:CDS 40.0%
! GTCAGTAATATGGACTGACT+CGG - Chr7:65338679-65338698 MsG0780039529.01.T01:intron 40.0%
! GTGCCCCATATTCTTTGAAA+GGG - Chr7:65342794-65342813 MsG0780039529.01.T01:intron 40.0%
! TTATCCACTGACTGTCAAAC+TGG - Chr7:65339738-65339757 MsG0780039529.01.T01:intron 40.0%
! TTGCAAAAGCTTCTGAAGGA+AGG - Chr7:65339151-65339170 MsG0780039529.01.T01:intron 40.0%
!! AAAAGCCAGCTTTGGGATAA+GGG + Chr7:65338593-65338612 None:intergenic 40.0%
!! CCCTATTTTGGAAAAGATGG+TGG - Chr7:65341742-65341761 MsG0780039529.01.T01:intron 40.0%
!! TTTTAGGTCACCTGTTATCG+AGG - Chr7:65338442-65338461 MsG0780039529.01.T01:intron 40.0%
!! TTTTTGTTGTGAAAAGCGGC+AGG - Chr7:65339511-65339530 MsG0780039529.01.T01:intron 40.0%
!!! CCGGAAACCCTTATTTTGAT+AGG - Chr7:65340597-65340616 MsG0780039529.01.T01:intron 40.0%
!!! CCGGAAACCCTTATTTTGAT+AGG + Chr7:65340616-65340597 None:intergenic 40.0%
!!! TTATCCCAAAGCTGGCTTTT+GGG - Chr7:65338593-65338612 MsG0780039529.01.T01:intron 40.0%
AAAACGTATGAGGCAGGAAC+AGG - Chr7:65339246-65339265 MsG0780039529.01.T01:intron 45.0%
AAGAATATGGGGCACATGGT+TGG + Chr7:65342789-65342808 None:intergenic 45.0%
AAGCCATATCCAAAAGGTGG+AGG + Chr7:65342888-65342907 None:intergenic 45.0%
AATCCCACCATCTACTAGCA+GGG + Chr7:65337871-65337890 None:intergenic 45.0%
AGATGGAATTCAAATCCCCC+CGG - Chr7:65342403-65342422 MsG0780039529.01.T01:intron 45.0%
AGCCATATCCAAAAGGTGGA+GGG + Chr7:65342887-65342906 None:intergenic 45.0%
AGGAGAGATGTACCCTTGAT+TGG + Chr7:65342091-65342110 None:intergenic 45.0%
ATATTAGGTGGTCTTTGGGC+CGG - Chr7:65337899-65337918 MsG0780039529.01.T01:CDS 45.0%
ATCAGGTTTGAGGGATACTG+TGG - Chr7:65340930-65340949 MsG0780039529.01.T01:intron 45.0%
ATGACTGGTGTGAGAACACA+AGG - Chr7:65341117-65341136 MsG0780039529.01.T01:intron 45.0%
ATGTCTAATCTTGGGCGTGA+AGG - Chr7:65338501-65338520 MsG0780039529.01.T01:intron 45.0%
ATGTCTTCCCTCATCCATTC+TGG + Chr7:65342756-65342775 None:intergenic 45.0%
ATTCAGTTCAGCAGTCCATC+AGG - Chr7:65342340-65342359 MsG0780039529.01.T01:intron 45.0%
ATTGAAGTGGACACATTGGG+AGG - Chr7:65343037-65343056 MsG0780039529.01.T01:CDS 45.0%
CACTTATGTTTGCAGCCAGT+AGG - Chr7:65342046-65342065 MsG0780039529.01.T01:intron 45.0%
CAGAACTTATGCAGCCTAAG+AGG - Chr7:65340519-65340538 MsG0780039529.01.T01:intron 45.0%
CCAAAGACCACCTAATATGG+GGG + Chr7:65337897-65337916 None:intergenic 45.0%
CCCAAAGACCACCTAATATG+GGG + Chr7:65337898-65337917 None:intergenic 45.0%
CCCCATATTAGGTGGTCTTT+GGG - Chr7:65337895-65337914 MsG0780039529.01.T01:CDS 45.0%
CTGAATAAAAGGGGGGAAAG+AGG + Chr7:65342471-65342490 None:intergenic 45.0%
GACAAGAAAACGTATGAGGC+AGG - Chr7:65339240-65339259 MsG0780039529.01.T01:intron 45.0%
GATGCAAGAGAAGTGGCAAA+TGG - Chr7:65340963-65340982 MsG0780039529.01.T01:intron 45.0%
GATTAGCACCAGAATGGATG+AGG - Chr7:65342745-65342764 MsG0780039529.01.T01:intron 45.0%
GCCCAAAGACCACCTAATAT+GGG + Chr7:65337899-65337918 None:intergenic 45.0%
GCTTTGATACCATCAGAAGC+TGG + Chr7:65338411-65338430 None:intergenic 45.0%
GGAAATGGCTAGCAATAACC+AGG - Chr7:65340984-65341003 MsG0780039529.01.T01:intron 45.0%
GGAGAGATGTACCCTTGATT+GGG + Chr7:65342090-65342109 None:intergenic 45.0%
GGAGTAAAGCCCTGTATGTA+TGG + Chr7:65337834-65337853 None:intergenic 45.0%
GGCTTTACTCCGACTTCAAT+TGG - Chr7:65337843-65337862 MsG0780039529.01.T01:CDS 45.0%
GGTTGCCAAAGACAATGAAC+TGG - Chr7:65338106-65338125 MsG0780039529.01.T01:intron 45.0%
GTATCCCTCAAACCTGATGT+AGG + Chr7:65340928-65340947 None:intergenic 45.0%
GTCAACACGAAGCTTTCTCA+AGG - Chr7:65339333-65339352 MsG0780039529.01.T01:intron 45.0%
GTGGGATGGATGAAATCAAC+TGG - Chr7:65341497-65341516 MsG0780039529.01.T01:intron 45.0%
GTGTGCCTAGAGATAGAACA+TGG + Chr7:65342719-65342738 None:intergenic 45.0%
TAAGAAAGCCCTCCTACATC+AGG - Chr7:65340913-65340932 MsG0780039529.01.T01:intron 45.0%
TATCCTGGCAATGGTGCAAT+AGG - Chr7:65340053-65340072 MsG0780039529.01.T01:intron 45.0%
TCAACCCAAAAGCCAGCTTT+GGG + Chr7:65338600-65338619 None:intergenic 45.0%
TCAGGTTTGAGGGATACTGT+GGG - Chr7:65340931-65340950 MsG0780039529.01.T01:intron 45.0%
TGTAGTTTGAGCATGTGTGG+AGG - Chr7:65341777-65341796 MsG0780039529.01.T01:intron 45.0%
TGTGTGTGTGTGTTGGACTA+TGG - Chr7:65338055-65338074 MsG0780039529.01.T01:intron 45.0%
TTCATTGTCTTTGGCAACCC+TGG + Chr7:65338105-65338124 None:intergenic 45.0%
! AGAGCACCTTGCCTCTAATA+AGG + Chr7:65338913-65338932 None:intergenic 45.0%
! CATGTGTGGAGGAGACTTTT+CGG - Chr7:65341788-65341807 MsG0780039529.01.T01:intron 45.0%
! CTTCTGAAGGAAGGAACTTC+CGG - Chr7:65339160-65339179 MsG0780039529.01.T01:intron 45.0%
! TACCCTCCACCTTTTGGATA+TGG - Chr7:65342882-65342901 MsG0780039529.01.T01:intron 45.0%
!! ATGATTCAATTTTGGCCCGG+TGG - Chr7:65337723-65337742 MsG0780039529.01.T01:exon 45.0%
!! CAAAAGCCAGCTTTGGGATA+AGG + Chr7:65338594-65338613 None:intergenic 45.0%
!! CTCTCAATTCTGGTGGATTC+CGG - Chr7:65340578-65340597 MsG0780039529.01.T01:intron 45.0%
!! CTCTCAATTCTGGTGGATTC+CGG + Chr7:65340597-65340578 None:intergenic 45.0%
!!! CTTATCCCAAAGCTGGCTTT+TGG - Chr7:65338592-65338611 MsG0780039529.01.T01:intron 45.0%
!! AATTTACAAAATAATAAAAA+AGG + Chr7:65337637-65337656 None:intergenic 5.0%
!! ATTTACAAAATAATAAAAAA+GGG + Chr7:65337636-65337655 None:intergenic 5.0%
!!! AATTGATATATATATTTTTT+TGG + Chr7:65337934-65337953 None:intergenic 5.0%
!!! AGATTTTTTTTTTTTTTTTT+TGG - Chr7:65337995-65338014 MsG0780039529.01.T01:intron 5.0%
!!! TATTATTTTGTAAATTTTTA+TGG - Chr7:65337641-65337660 MsG0780039529.01.T01:three_prime_UTR 5.0%
ACCACTGAGCTAACACCTGA+TGG + Chr7:65342358-65342377 None:intergenic 50.0%
ACCATCAGAAGCTGGGCTTT+AGG + Chr7:65338403-65338422 None:intergenic 50.0%
AGCAGGGGACCAATTGAAGT+CGG + Chr7:65337855-65337874 None:intergenic 50.0%
ATCCCACCATCTACTAGCAG+GGG + Chr7:65337870-65337889 None:intergenic 50.0%
ATGGAATTCAAATCCCCCCG+GGG - Chr7:65342405-65342424 MsG0780039529.01.T01:intron 50.0%
ATTGGTCCCCTGCTAGTAGA+TGG - Chr7:65337861-65337880 MsG0780039529.01.T01:CDS 50.0%
CAATCCCACCATCTACTAGC+AGG + Chr7:65337872-65337891 None:intergenic 50.0%
CATCCTATTGCACCATTGCC+AGG + Chr7:65340059-65340078 None:intergenic 50.0%
CCCCCATATTAGGTGGTCTT+TGG - Chr7:65337894-65337913 MsG0780039529.01.T01:CDS 50.0%
CCCTCAAACCTGATGTAGGA+GGG + Chr7:65340924-65340943 None:intergenic 50.0%
CCCTCCTACATCAGGTTTGA+GGG - Chr7:65340921-65340940 MsG0780039529.01.T01:intron 50.0%
CTCAACCCAAAAGCCAGCTT+TGG + Chr7:65338601-65338620 None:intergenic 50.0%
GATGGAATTCAAATCCCCCC+GGG - Chr7:65342404-65342423 MsG0780039529.01.T01:intron 50.0%
GGCCCAAAGACCACCTAATA+TGG + Chr7:65337900-65337919 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGTGT+TGG - Chr7:65338040-65338059 MsG0780039529.01.T01:intron 50.0%
TATCCCAAGTCACACACCAC+CGG + Chr7:65337742-65337761 None:intergenic 50.0%
TCCACAGATGCCTCGATAAC+AGG + Chr7:65338455-65338474 None:intergenic 50.0%
TCCATCAGGTGTTAGCTCAG+TGG - Chr7:65342354-65342373 MsG0780039529.01.T01:intron 50.0%
TCCCTCAAACCTGATGTAGG+AGG + Chr7:65340925-65340944 None:intergenic 50.0%
TCGTCCAGTTTGACAGTCAG+TGG + Chr7:65339745-65339764 None:intergenic 50.0%
TGGTGCAATAGGATGCTGCA+CGG - Chr7:65340064-65340083 MsG0780039529.01.T01:intron 50.0%
! ACCTGTTATCGAGGCATCTG+TGG - Chr7:65338451-65338470 MsG0780039529.01.T01:intron 50.0%
! GAGACTTTTCGGAGCCTCAT+TGG - Chr7:65341799-65341818 MsG0780039529.01.T01:intron 50.0%
! GATTGGTCCCCCATATTAGG+TGG - Chr7:65337887-65337906 MsG0780039529.01.T01:CDS 50.0%
! TCGGTTTACCCTCCACCTTT+TGG - Chr7:65342876-65342895 MsG0780039529.01.T01:intron 50.0%
!! CTGCTAGTAGATGGTGGGAT+TGG - Chr7:65337870-65337889 MsG0780039529.01.T01:CDS 50.0%
!! GCAGGAGTGCTCTACTTCTA+AGG - Chr7:65339529-65339548 MsG0780039529.01.T01:intron 50.0%
!! TGGGATTGGTCCCCCATATT+AGG - Chr7:65337884-65337903 MsG0780039529.01.T01:CDS 50.0%
AATTCAAATCCCCCCGGGGA+CGG - Chr7:65342409-65342428 MsG0780039529.01.T01:intron 55.0%
AGCAGTTCTGCTTCCTCTCC+AGG + Chr7:65342693-65342712 None:intergenic 55.0%
ATCCCAAGTCACACACCACC+GGG + Chr7:65337741-65337760 None:intergenic 55.0%
CAGTTCTGCTTCCTCTCCAG+GGG + Chr7:65342691-65342710 None:intergenic 55.0%
GAGGCAGGAACAGGATGCAT+TGG - Chr7:65339255-65339274 MsG0780039529.01.T01:intron 55.0%
GCAGTTCTGCTTCCTCTCCA+GGG + Chr7:65342692-65342711 None:intergenic 55.0%
GCCCTCCTACATCAGGTTTG+AGG - Chr7:65340920-65340939 MsG0780039529.01.T01:intron 55.0%
GCCTAAAGCCCAGCTTCTGA+TGG - Chr7:65338399-65338418 MsG0780039529.01.T01:intron 55.0%
GGCAACCCTTATCCCAAAGC+TGG - Chr7:65338585-65338604 MsG0780039529.01.T01:intron 55.0%
GTCCCCTGCTAGTAGATGGT+GGG - Chr7:65337865-65337884 MsG0780039529.01.T01:CDS 55.0%
TGATGACTAGCAACCGTCCC+CGG + Chr7:65342425-65342444 None:intergenic 55.0%
! GGCTGCAAACATAAGTGCCG+AGG + Chr7:65342043-65342062 None:intergenic 55.0%
!! TCATGGATTAGCAGAGCCCC+TGG - Chr7:65342672-65342691 MsG0780039529.01.T01:intron 55.0%
ATGACTAGCAACCGTCCCCG+GGG + Chr7:65342423-65342442 None:intergenic 60.0%
GATGACTAGCAACCGTCCCC+GGG + Chr7:65342424-65342443 None:intergenic 60.0%
GATTAGCAGAGCCCCTGGAG+AGG - Chr7:65342677-65342696 MsG0780039529.01.T01:intron 60.0%
GGTCCCCTGCTAGTAGATGG+TGG - Chr7:65337864-65337883 MsG0780039529.01.T01:CDS 60.0%
GGCCCGGTGGTGTGTGACTT+GGG - Chr7:65337736-65337755 MsG0780039529.01.T01:exon 65.0%
TGACTAGCAACCGTCCCCGG+GGG + Chr7:65342422-65342441 None:intergenic 65.0%
TGGCCCGGTGGTGTGTGACT+TGG - Chr7:65337735-65337754 MsG0780039529.01.T01:exon 65.0%
GACTAGCAACCGTCCCCGGG+GGG + Chr7:65342421-65342440 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 65337194 65343388 65337194 ID=MsG0780039529.01;Name=MsG0780039529.01
Chr7 mRNA 65337194 65343388 65337194 ID=MsG0780039529.01.T01;Parent=MsG0780039529.01;Name=MsG0780039529.01.T01;_AED=0.45;_eAED=0.47;_QI=0|0.85|0.87|1|0.85|0.87|8|543|317
Chr7 exon 65337194 65337927 65337194 ID=MsG0780039529.01.T01:exon:10339;Parent=MsG0780039529.01.T01
Chr7 exon 65340787 65340918 65340787 ID=MsG0780039529.01.T01:exon:10338;Parent=MsG0780039529.01.T01
Chr7 exon 65341016 65341124 65341016 ID=MsG0780039529.01.T01:exon:10337;Parent=MsG0780039529.01.T01
Chr7 exon 65341210 65341460 65341210 ID=MsG0780039529.01.T01:exon:10336;Parent=MsG0780039529.01.T01
Chr7 exon 65342415 65342476 65342415 ID=MsG0780039529.01.T01:exon:10335;Parent=MsG0780039529.01.T01
Chr7 exon 65342974 65343064 65342974 ID=MsG0780039529.01.T01:exon:10334;Parent=MsG0780039529.01.T01
Chr7 exon 65343201 65343270 65343201 ID=MsG0780039529.01.T01:exon:10333;Parent=MsG0780039529.01.T01
Chr7 exon 65343341 65343388 65343341 ID=MsG0780039529.01.T01:exon:10332;Parent=MsG0780039529.01.T01
Chr7 CDS 65343341 65343388 65343341 ID=MsG0780039529.01.T01:cds;Parent=MsG0780039529.01.T01
Chr7 CDS 65343201 65343270 65343201 ID=MsG0780039529.01.T01:cds;Parent=MsG0780039529.01.T01
Chr7 CDS 65342974 65343064 65342974 ID=MsG0780039529.01.T01:cds;Parent=MsG0780039529.01.T01
Chr7 CDS 65342415 65342476 65342415 ID=MsG0780039529.01.T01:cds;Parent=MsG0780039529.01.T01
Chr7 CDS 65341210 65341460 65341210 ID=MsG0780039529.01.T01:cds;Parent=MsG0780039529.01.T01
Chr7 CDS 65341016 65341124 65341016 ID=MsG0780039529.01.T01:cds;Parent=MsG0780039529.01.T01
Chr7 CDS 65340787 65340918 65340787 ID=MsG0780039529.01.T01:cds;Parent=MsG0780039529.01.T01
Chr7 CDS 65337737 65337927 65337737 ID=MsG0780039529.01.T01:cds;Parent=MsG0780039529.01.T01
Chr7 three_prime_UTR 65337194 65337736 65337194 ID=MsG0780039529.01.T01:three_prime_utr;Parent=MsG0780039529.01.T01
Gene Sequence

>MsG0780039529.01.T01

ATGGAAGCTCTCTACAAAAAACTCTACTCCAAATACACTACTCTCAAGACTAACAAACTCTCCGAATTGGAAGATGTTAACAAGGAACAAGAACTCAAATTCCTCAAATTTGTCTCTGCTGCGGAAGAAGTAATAGATCACTTGAGGACTGAAAATGATAAGCTTCTTGGACAAATTAATGATTTGGGTAATGAATTAACTTCAGTTAGGGTTGCCAAAGACAATGAACTGGTTGAACATCAAAGGCTTTTATTGGAGGAAAAGAAGAAGAATGAAGCTCTTTTTGAAGAAGTTGAGAAGTTGCAAAAGCTTCTGAAGGAAGGAACTTCCGGTGATTTAAGTAACAGAAATGTTGTGAACAATACCTCCAATAACTCATCTATAAGAATGACAAGAAAACGTATGAGGCAGGAACAGGATGCATTGGACATAGAAGCAAGGTTTATACCATCTGAAAATGAAGGTAATTCTGTGGATAGAGAGTCAACACGAAGCTTTCTCAAGGAGAATGCTTCCAATAAGCACGTTTCATTTTATTATTTTGATGGATACATTAAAAACCTTAATATGATCACTTTTTGTTGTGAAAAGCGGCAGGAGTGCTCTACTTCTAAGGCTAATGATCAATCAGCCGTTGATACACAAGAAAGTGATCATAAAAACTGGCTTGTTCATACTCTTTTTGAGTATACATTGGATATGAAATTATCCACTGACTGTCAAACTGGACGATTATGTCTCTCTGCAATGCATCAATCAAGTGGTTACTCCTTCAGTATATCATGGATTAGCAGAGCCCCTGGAGAGGAAGCAGAACTGCTATACCATGTTCTATCTCTAGGCACACTTGAAAGATTAGCACCAGAATGGATGAGGGAAGACATCATGTTCAGTCCAACCATGTGCCCCATATTCTTTGAAAGGGTGACGCGTGTTATCAATTTGAAACACTGA

Protein sequence

>MsG0780039529.01.T01

MEALYKKLYSKYTTLKTNKLSELEDVNKEQELKFLKFVSAAEEVIDHLRTENDKLLGQINDLGNELTSVRVAKDNELVEHQRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRNVVNNTSNNSSIRMTRKRMRQEQDALDIEARFIPSENEGNSVDRESTRSFLKENASNKHVSFYYFDGYIKNLNMITFCCEKRQECSTSKANDQSAVDTQESDHKNWLVHTLFEYTLDMKLSTDCQTGRLCLSAMHQSSGYSFSISWISRAPGEEAELLYHVLSLGTLERLAPEWMREDIMFSPTMCPIFFERVTRVINLKH*