AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005250.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005250.01.T01 MTR_1g095640 56.119 335 30 5 38 338 175 426 8.30e-88 270
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005250.01.T01 AT5G50840 44.214 337 60 9 37 336 156 401 6.47e-53 179
MsG0180005250.01.T01 AT5G50840 44.214 337 60 9 37 336 157 402 6.49e-53 179

Find 46 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAACATGCATTGAATTTC+AGG 0.170965 1:-89189599 MsG0180005250.01.T01:CDS
GCCAAACACCATTCTAAAAT+AGG 0.228298 1:+89189711 None:intergenic
TGCATTCTTCCTGAAAATAA+TGG 0.245108 1:+89192011 None:intergenic
TTGGCTGATCCTAGCACTTC+TGG 0.266329 1:-89189693 MsG0180005250.01.T01:intron
CAACCACCTCTTCTTCATAT+TGG 0.283834 1:+89188920 None:intergenic
AAATTAGTCCTTGGTGGGTT+GGG 0.367376 1:-89193293 MsG0180005250.01.T01:intron
ATCGCTATGCCGGTCACTTC+AGG 0.373308 1:-89188999 MsG0180005250.01.T01:CDS
TGCTACAGGATGTGAGTATC+AGG 0.375897 1:-89190648 MsG0180005250.01.T01:intron
GACTGTAATGTAATAGAAAC+TGG 0.386543 1:+89194094 None:intergenic
CCAAACACCATTCTAAAATA+GGG 0.400238 1:+89189712 None:intergenic
TTCAAACCTTGATTGCATCT+TGG 0.400861 1:+89191936 None:intergenic
ACTATTATTACTCTTGTTCT+CGG 0.407706 1:+89188955 None:intergenic
CAGAATAAATGTCACCTTCT+GGG 0.408951 1:+89190241 None:intergenic
GATGATTGCCTTTCAGCTAA+AGG 0.467244 1:-89190610 MsG0180005250.01.T01:CDS
ATAAGCTTGAGTCACTATGC+AGG 0.470749 1:-89193575 MsG0180005250.01.T01:CDS
TAAGTTCCAAGATGCAATCA+AGG 0.480936 1:-89191942 MsG0180005250.01.T01:intron
AAAATTAGTCCTTGGTGGGT+TGG 0.485716 1:-89193294 MsG0180005250.01.T01:intron
AATTGAAAATTAGTCCTTGG+TGG 0.486573 1:-89193299 MsG0180005250.01.T01:intron
ATTAGTTCATTCTACAGAAA+CGG 0.492031 1:-89194046 MsG0180005250.01.T01:intron
CATCTTGCACTGCCTTGATG+AGG 0.492384 1:-89193267 MsG0180005250.01.T01:CDS
CGAGCGCTTGAAGAAACAGC+TGG 0.505935 1:-89189053 MsG0180005250.01.T01:CDS
TGCGTTCTCCTTTAGCTGAA+AGG 0.514833 1:+89190602 None:intergenic
ATCAATGAAGGAACTCAAGA+AGG 0.523923 1:-89189390 MsG0180005250.01.T01:CDS
ATTGAAAATTAGTCCTTGGT+GGG 0.532815 1:-89193298 MsG0180005250.01.T01:intron
TCCTCTCTGCCTGAAGTGAC+CGG 0.533884 1:+89188990 None:intergenic
GCACTTGTGTACAGAGCTGC+TGG 0.543023 1:-89193245 MsG0180005250.01.T01:intron
TCAGATGGCAAAATCAATGA+AGG 0.543783 1:-89189402 MsG0180005250.01.T01:intron
GATAACTGAATGTGCTAAGT+CGG 0.548424 1:-89194225 MsG0180005250.01.T01:CDS
GCGTCAAAATAAAATGCTGA+TGG 0.573163 1:-89193544 MsG0180005250.01.T01:CDS
CAACTGAGGGGCAAAACTTG+AGG 0.580596 1:-89191979 MsG0180005250.01.T01:CDS
TGTACACAAGTGCCTCATCA+AGG 0.581153 1:+89193255 None:intergenic
AAATCAGAACCAGAAGTGCT+AGG 0.582133 1:+89189684 None:intergenic
TGCAAACGTGTATCAACTGA+GGG 0.582847 1:-89191992 MsG0180005250.01.T01:CDS
TGAGGGGCAAAACTTGAGGA+TGG 0.583482 1:-89191975 MsG0180005250.01.T01:CDS
TGACTCAAGCTTATCTCTGA+CGG 0.609729 1:+89193584 None:intergenic
TGAGCAGCAATATGCCCAGA+AGG 0.617929 1:-89190255 MsG0180005250.01.T01:intron
TATCAGGCTCGAAGAACGAA+AGG 0.619128 1:-89190632 MsG0180005250.01.T01:CDS
TAAGGTATTCGGTCTCATTG+CGG 0.634523 1:-89189135 MsG0180005250.01.T01:intron
TAAGCTTGAGTCACTATGCA+GGG 0.636629 1:-89193574 MsG0180005250.01.T01:CDS
ACTTATAGAGTTAGTTGACG+AGG 0.647388 1:-89189324 MsG0180005250.01.T01:CDS
ATTTAAACAAGAGATTGAGA+AGG 0.652438 1:-89189542 MsG0180005250.01.T01:intron
GCCGGTCACTTCAGGCAGAG+AGG 0.655548 1:-89188991 MsG0180005250.01.T01:CDS
ATGCAAACGTGTATCAACTG+AGG 0.661308 1:-89191993 MsG0180005250.01.T01:CDS
AGATGAAACCCAACCCACCA+AGG 0.665039 1:+89193285 None:intergenic
GAGTAATAATAGTAACAACT+CGG 0.668165 1:-89188945 MsG0180005250.01.T01:CDS
GCAAACGTGTATCAACTGAG+GGG 0.772676 1:-89191991 MsG0180005250.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAGAATTTAAATAATTAA+TGG + Chr1:89190277-89190296 None:intergenic 10.0%
!! ATATATTATAGAATAGTAAA+TGG + Chr1:89193895-89193914 None:intergenic 10.0%
!! CTATTCTATAATATATAAAT+AGG - Chr1:89193899-89193918 MsG0180005250.01.T01:intron 10.0%
!! TTGAAAAAAATGTAATATTT+AGG + Chr1:89193659-89193678 None:intergenic 10.0%
!!! TTGATTCATTTTTAAAAATA+TGG + Chr1:89194054-89194073 None:intergenic 10.0%
!!! TTTTTTTCTTGTATTAATTT+GGG - Chr1:89189394-89189413 MsG0180005250.01.T01:CDS 10.0%
!!! TTTTTTTTCTTGTATTAATT+TGG - Chr1:89189393-89189412 MsG0180005250.01.T01:CDS 10.0%
!! AAAAATTAGTTACAGATTAA+GGG + Chr1:89189521-89189540 None:intergenic 15.0%
!! AAAATTAAACACATATACTT+TGG + Chr1:89190143-89190162 None:intergenic 15.0%
!! AATATTATACCAAGTATTAT+CGG + Chr1:89192659-89192678 None:intergenic 15.0%
!! ATATACAAAGAAAATCTAAA+TGG - Chr1:89192077-89192096 MsG0180005250.01.T01:CDS 15.0%
!! ATATTACTATCTTTACAATT+CGG + Chr1:89192412-89192431 None:intergenic 15.0%
!!! AAAAACTTAAAAACAGATTT+TGG - Chr1:89191508-89191527 MsG0180005250.01.T01:intron 15.0%
!!! ATAAACTTTTATCAATTTCT+AGG - Chr1:89190638-89190657 MsG0180005250.01.T01:CDS 15.0%
!!! TGAATTATTTTCTTTATAGA+TGG - Chr1:89191917-89191936 MsG0180005250.01.T01:intron 15.0%
!!! TTAAAAATTTGCTGAAAAAT+GGG + Chr1:89191729-89191748 None:intergenic 15.0%
!!! TTGTTATTGTATATATTGTT+GGG - Chr1:89191893-89191912 MsG0180005250.01.T01:intron 15.0%
!!! TTTAAAAATTTGCTGAAAAA+TGG + Chr1:89191730-89191749 None:intergenic 15.0%
!!! TTTAGATTTTCTTTGTATAT+AGG + Chr1:89192077-89192096 None:intergenic 15.0%
!! AAAAATTACAAAAGAGTAAG+TGG + Chr1:89191488-89191507 None:intergenic 20.0%
!! AAACCATCTTAATTATATCT+CGG - Chr1:89190348-89190367 MsG0180005250.01.T01:intron 20.0%
!! AATTAAAATTAAGCAACATG+AGG - Chr1:89193061-89193080 MsG0180005250.01.T01:intron 20.0%
!! ACATAGTGTAATCAAATTAT+TGG - Chr1:89189142-89189161 MsG0180005250.01.T01:intron 20.0%
!! ATAATTGAAAATGATTCCAT+GGG + Chr1:89192448-89192467 None:intergenic 20.0%
!! ATAGCAATACATTTAAAAAG+AGG + Chr1:89188990-89189009 None:intergenic 20.0%
!! ATATAAATAGGGAGATAAAT+TGG - Chr1:89193911-89193930 MsG0180005250.01.T01:intron 20.0%
!! CAAAAATTAGTTACAGATTA+AGG + Chr1:89189522-89189541 None:intergenic 20.0%
!! CATAGTGTAATCAAATTATT+GGG - Chr1:89189143-89189162 MsG0180005250.01.T01:intron 20.0%
!! TAGCACATAATATAATAAAG+TGG + Chr1:89193253-89193272 None:intergenic 20.0%
!! TATAAACTAAACATGAGAAA+TGG + Chr1:89189976-89189995 None:intergenic 20.0%
!! TATTACTATCTTTACAATTC+GGG + Chr1:89192411-89192430 None:intergenic 20.0%
!!! AAATCATGTCGAATTATTTT+AGG + Chr1:89192833-89192852 None:intergenic 20.0%
!!! AATTACCATATTTTGATAGA+CGG + Chr1:89193991-89194010 None:intergenic 20.0%
!!! ACCATTGATTTGTTTAATAA+CGG - Chr1:89193370-89193389 MsG0180005250.01.T01:intron 20.0%
!!! ATTATTTTCTTTATAGATGG+CGG - Chr1:89191920-89191939 MsG0180005250.01.T01:intron 20.0%
!!! CATTTCATTTTTGTTTCAAA+AGG + Chr1:89190427-89190446 None:intergenic 20.0%
!!! CTCTTTTTAAAAGGAAAAAA+GGG - Chr1:89192766-89192785 MsG0180005250.01.T01:intron 20.0%
!!! GTTGTTATTGTATATATTGT+TGG - Chr1:89191892-89191911 MsG0180005250.01.T01:intron 20.0%
!!! TATTTATTAACTTTTGAGAC+TGG - Chr1:89192973-89192992 MsG0180005250.01.T01:intron 20.0%
!!! TCTTCTTAAAAAACTTTTCA+GGG + Chr1:89192592-89192611 None:intergenic 20.0%
!!! TTGATTTGTTATGAAAGTTT+TGG - Chr1:89190764-89190783 MsG0180005250.01.T01:intron 20.0%
!!! TTTCAGCAAATTTTTAAATC+TGG - Chr1:89191732-89191751 MsG0180005250.01.T01:intron 20.0%
! AAAAATGTACCATGTTCAAA+TGG + Chr1:89189377-89189396 None:intergenic 25.0%
! AACCATCTTAATTATATCTC+GGG - Chr1:89190349-89190368 MsG0180005250.01.T01:intron 25.0%
! AATAAGAAAAGGAACTCATT+AGG + Chr1:89191028-89191047 None:intergenic 25.0%
! AATCAATCTAAATCAAAGAC+AGG - Chr1:89191656-89191675 MsG0180005250.01.T01:intron 25.0%
! ACCGTTATTAAACAAATCAA+TGG + Chr1:89193374-89193393 None:intergenic 25.0%
! ACTATTATTACTCTTGTTCT+CGG + Chr1:89194209-89194228 None:intergenic 25.0%
! ACTCTGTTAATGAAAAAACT+AGG - Chr1:89191118-89191137 MsG0180005250.01.T01:intron 25.0%
! ACTGTTAGGATATAGAATAA+CGG - Chr1:89192173-89192192 MsG0180005250.01.T01:intron 25.0%
! AGGATATTTGTATAGATAAG+AGG - Chr1:89192219-89192238 MsG0180005250.01.T01:intron 25.0%
! ATCAATCTAAATCAAAGACA+GGG - Chr1:89191657-89191676 MsG0180005250.01.T01:intron 25.0%
! ATTACTATCTTTACAATTCG+GGG + Chr1:89192410-89192429 None:intergenic 25.0%
! ATTAGATTCCAATATGTTCA+AGG - Chr1:89191764-89191783 MsG0180005250.01.T01:intron 25.0%
! ATTAGTTCATTCTACAGAAA+CGG - Chr1:89189115-89189134 MsG0180005250.01.T01:CDS 25.0%
! ATTCGACATGATTTCAATAT+AGG - Chr1:89192839-89192858 MsG0180005250.01.T01:intron 25.0%
! ATTCTATGCTCAAAGATTAA+GGG + Chr1:89191551-89191570 None:intergenic 25.0%
! ATTTAAACAAGAGATTGAGA+AGG - Chr1:89193619-89193638 MsG0180005250.01.T01:intron 25.0%
! CACATAAACACATAAACTAA+GGG - Chr1:89190027-89190046 MsG0180005250.01.T01:intron 25.0%
! CACATTCATGTAATAAGAAA+AGG + Chr1:89191039-89191058 None:intergenic 25.0%
! CATATTAACTGTTGTTATGT+TGG - Chr1:89188963-89188982 MsG0180005250.01.T01:CDS 25.0%
! CCAAAGAAACATTAATTTCA+AGG + Chr1:89191587-89191606 None:intergenic 25.0%
! CCTTGAAATTAATGTTTCTT+TGG - Chr1:89191584-89191603 MsG0180005250.01.T01:intron 25.0%
! GAGTAATAATAGTAACAACT+CGG - Chr1:89194216-89194235 MsG0180005250.01.T01:CDS 25.0%
! GATAATTGAAAATGATTCCA+TGG + Chr1:89192449-89192468 None:intergenic 25.0%
! GTAATTTGATACTAGGATAT+TGG - Chr1:89189185-89189204 MsG0180005250.01.T01:intron 25.0%
! TATTAGATAATCAGTTTCAG+AGG + Chr1:89189664-89189683 None:intergenic 25.0%
! TATTCTATGCTCAAAGATTA+AGG + Chr1:89191552-89191571 None:intergenic 25.0%
! TCACATAAACACATAAACTA+AGG - Chr1:89190026-89190045 MsG0180005250.01.T01:intron 25.0%
! TGTTGAATGCCTAAAAAATT+AGG - Chr1:89189706-89189725 MsG0180005250.01.T01:CDS 25.0%
! TTTAATGAAATTGCTTATCG+TGG + Chr1:89190325-89190344 None:intergenic 25.0%
!! ATACAATGGCTCTTTTTAAA+AGG - Chr1:89192757-89192776 MsG0180005250.01.T01:intron 25.0%
!! ATTCATGTTCCATTATTTTC+AGG - Chr1:89191141-89191160 MsG0180005250.01.T01:intron 25.0%
!! GTCTTCTTAAAAAACTTTTC+AGG + Chr1:89192593-89192612 None:intergenic 25.0%
!! TTATTTTCTTTATAGATGGC+GGG - Chr1:89191921-89191940 MsG0180005250.01.T01:intron 25.0%
!! TTCTTGTATTAATTTGGGTT+AGG - Chr1:89189399-89189418 MsG0180005250.01.T01:CDS 25.0%
!! TTTTGAACAAAGTGTACATT+TGG - Chr1:89191277-89191296 MsG0180005250.01.T01:intron 25.0%
!!! ATAGTAATATCTTTTCTAGC+TGG - Chr1:89192422-89192441 MsG0180005250.01.T01:intron 25.0%
!!! ATTTTTGCTTTTCATCCTTA+AGG - Chr1:89194008-89194027 MsG0180005250.01.T01:intron 25.0%
!!! CTTAAAAACAGATTTTGGAA+AGG - Chr1:89191513-89191532 MsG0180005250.01.T01:intron 25.0%
!!! GCTCTTTTTAAAAGGAAAAA+AGG - Chr1:89192765-89192784 MsG0180005250.01.T01:intron 25.0%
!!! TACTTATCCCTATTTTAGAA+TGG - Chr1:89193442-89193461 MsG0180005250.01.T01:intron 25.0%
!!! TCATTTTTGTTTCAAAAGGA+TGG + Chr1:89190423-89190442 None:intergenic 25.0%
!!! TGTATGTAATTTTGTTTAGC+TGG - Chr1:89190821-89190840 MsG0180005250.01.T01:intron 25.0%
!!! TTTTAAAAAGAGCCATTGTA+TGG + Chr1:89192758-89192777 None:intergenic 25.0%
AAAAATACTGTAGCGAGATT+AGG + Chr1:89190889-89190908 None:intergenic 30.0%
AAAAGAGACATTCTTCAAGA+CGG + Chr1:89190861-89190880 None:intergenic 30.0%
AACAATCATAGGATCCATAA+AGG + Chr1:89192800-89192819 None:intergenic 30.0%
AATTGAAAATTAGTCCTTGG+TGG - Chr1:89189862-89189881 MsG0180005250.01.T01:intron 30.0%
ACCATCTTAATTATATCTCG+GGG - Chr1:89190350-89190369 MsG0180005250.01.T01:intron 30.0%
AGAACAAGTATCTCAGTTAT+TGG - Chr1:89193124-89193143 MsG0180005250.01.T01:intron 30.0%
AGAGAAGCAATACATTTAGA+AGG + Chr1:89189314-89189333 None:intergenic 30.0%
AGTTTATGTGTTTATGTGAG+TGG + Chr1:89190025-89190044 None:intergenic 30.0%
ATCCTAGTATCAAATTACAC+TGG + Chr1:89189183-89189202 None:intergenic 30.0%
ATCTGACTACAAACCAAATT+TGG - Chr1:89189739-89189758 MsG0180005250.01.T01:intron 30.0%
ATGTGTCATAAATTAAAGCG+TGG + Chr1:89191310-89191329 None:intergenic 30.0%
ATTCAAGTGCTCAATTACAA+AGG + Chr1:89189246-89189265 None:intergenic 30.0%
ATTGAAAATTAGTCCTTGGT+GGG - Chr1:89189863-89189882 MsG0180005250.01.T01:intron 30.0%
ATTTGATACTAGGATATTGG+AGG - Chr1:89189188-89189207 MsG0180005250.01.T01:intron 30.0%
CAAACAAATTCAGATTTCCA+TGG + Chr1:89189831-89189850 None:intergenic 30.0%
CTGAATAGATGTATTTCAAC+AGG - Chr1:89190607-89190626 MsG0180005250.01.T01:CDS 30.0%
CTGTTAGGATATAGAATAAC+GGG - Chr1:89192174-89192193 MsG0180005250.01.T01:intron 30.0%
GACTGTAATGTAATAGAAAC+TGG + Chr1:89189070-89189089 None:intergenic 30.0%
GCTAATTGAAAATTAGTCCT+TGG - Chr1:89189859-89189878 MsG0180005250.01.T01:intron 30.0%
GTCTTCATTTGGAAAATTGA+TGG - Chr1:89192378-89192397 MsG0180005250.01.T01:intron 30.0%
GTGACTAACATATTGCTTTA+TGG + Chr1:89193938-89193957 None:intergenic 30.0%
GTTTATGTGTTTATGTGAGT+GGG + Chr1:89190024-89190043 None:intergenic 30.0%
TAAATGGTCAAGAACAAAAC+AGG + Chr1:89193879-89193898 None:intergenic 30.0%
TACCAGTGTAATTTGATACT+AGG - Chr1:89189178-89189197 MsG0180005250.01.T01:intron 30.0%
TACTTCTTGAGAAACCTATT+TGG - Chr1:89190555-89190574 MsG0180005250.01.T01:intron 30.0%
TATGCACACATAACAAATCA+TGG + Chr1:89193342-89193361 None:intergenic 30.0%
TCAAACATGCATTGAATTTC+AGG - Chr1:89193562-89193581 MsG0180005250.01.T01:CDS 30.0%
TCAACAAGAATTTCTCAAAG+AGG + Chr1:89190748-89190767 None:intergenic 30.0%
TCAGACAAAATAATTACCAG+CGG + Chr1:89190591-89190610 None:intergenic 30.0%
TCATTGTGGTAAAAATCAGA+TGG - Chr1:89193744-89193763 MsG0180005250.01.T01:intron 30.0%
TCTAAATGACCATTTGAACA+TGG - Chr1:89189365-89189384 MsG0180005250.01.T01:CDS 30.0%
TCTGACTACAAACCAAATTT+GGG - Chr1:89189740-89189759 MsG0180005250.01.T01:intron 30.0%
TGCATCTTCTTAACTGTAAT+GGG - Chr1:89189266-89189285 MsG0180005250.01.T01:intron 30.0%
TGCATTCTTCCTGAAAATAA+TGG + Chr1:89191153-89191172 None:intergenic 30.0%
TGCTTGAATCATATCTTACT+TGG - Chr1:89193688-89193707 MsG0180005250.01.T01:intron 30.0%
TGTATAGATAAGAGGATAGT+AGG - Chr1:89192227-89192246 MsG0180005250.01.T01:intron 30.0%
TGTTAAAACTACCAAACGTT+TGG - Chr1:89190445-89190464 MsG0180005250.01.T01:intron 30.0%
TTAAACACATATACTTTGGC+AGG + Chr1:89190139-89190158 None:intergenic 30.0%
TTATACCAAGTATTATCGGA+TGG + Chr1:89192655-89192674 None:intergenic 30.0%
TTGCATCTTCTTAACTGTAA+TGG - Chr1:89189265-89189284 MsG0180005250.01.T01:intron 30.0%
TTGTGACTGAAATGAAAAAG+AGG + Chr1:89193225-89193244 None:intergenic 30.0%
TTTCTCCGTCTATCAAAATA+TGG - Chr1:89193983-89194002 MsG0180005250.01.T01:intron 30.0%
TTTGATACTAGGATATTGGA+GGG - Chr1:89189189-89189208 MsG0180005250.01.T01:intron 30.0%
! GGTATCTAAATTCTGAAGAA+GGG - Chr1:89189937-89189956 MsG0180005250.01.T01:intron 30.0%
! GTAATAGAAACTGGTTTCTA+TGG + Chr1:89189061-89189080 None:intergenic 30.0%
! TCTGATTTGAAACATAGTGT+GGG - Chr1:89193492-89193511 MsG0180005250.01.T01:intron 30.0%
! TCTGATTTTTACCACAATGA+TGG + Chr1:89193744-89193763 None:intergenic 30.0%
! TGGTATCTAAATTCTGAAGA+AGG - Chr1:89189936-89189955 MsG0180005250.01.T01:intron 30.0%
! TGTATTAATTTGGGTTAGGT+TGG - Chr1:89189403-89189422 MsG0180005250.01.T01:intron 30.0%
! TTCTGATTTGAAACATAGTG+TGG - Chr1:89193491-89193510 MsG0180005250.01.T01:intron 30.0%
! TTTCTCAAGAAGTAACCTTT+TGG + Chr1:89190549-89190568 None:intergenic 30.0%
! TTTTACCATCCGATAATACT+TGG - Chr1:89192647-89192666 MsG0180005250.01.T01:intron 30.0%
!! CCAAACACCATTCTAAAATA+GGG + Chr1:89193452-89193471 None:intergenic 30.0%
!! CTTTTCATCCTTAAGGTATT+CGG - Chr1:89194015-89194034 MsG0180005250.01.T01:intron 30.0%
!! TTTTACCACAATGATGGAAA+AGG + Chr1:89193738-89193757 None:intergenic 30.0%
!! TTTTGGAAAGGATATCAAAC+AGG - Chr1:89191525-89191544 MsG0180005250.01.T01:intron 30.0%
!!! CAGTATTTTTTTTCCCTTTC+TGG - Chr1:89190899-89190918 MsG0180005250.01.T01:intron 30.0%
!!! GAAAATCTTTTTGGGATTCT+TGG - Chr1:89190697-89190716 MsG0180005250.01.T01:intron 30.0%
!!! GTTGTTTTGAGAAACACTTA+GGG - Chr1:89189444-89189463 MsG0180005250.01.T01:intron 30.0%
!!! TGTTGTTTTGAGAAACACTT+AGG - Chr1:89189443-89189462 MsG0180005250.01.T01:intron 30.0%
!!! TTGCTACTTAGTTTTGAGTT+CGG - Chr1:89191632-89191651 MsG0180005250.01.T01:intron 30.0%
!!! TTGTTTTGAGAAACACTTAG+GGG - Chr1:89189445-89189464 MsG0180005250.01.T01:intron 30.0%
AAAAACTTGAATCGCTATGC+CGG - Chr1:89194152-89194171 MsG0180005250.01.T01:intron 35.0%
AAAATAATTACCAGCGGCAT+TGG + Chr1:89190585-89190604 None:intergenic 35.0%
AAACTACCAAACGTTTGGAA+TGG - Chr1:89190450-89190469 MsG0180005250.01.T01:intron 35.0%
AACAGTTGAAGCAAAGTCAT+TGG - Chr1:89193023-89193042 MsG0180005250.01.T01:intron 35.0%
AAGCAAGTGATACTACTGTT+AGG - Chr1:89192159-89192178 MsG0180005250.01.T01:intron 35.0%
AAGTGAATTGTTCACTTCAG+TGG - Chr1:89193418-89193437 MsG0180005250.01.T01:intron 35.0%
AATTACTGCTTGATCTTTCG+CGG + Chr1:89191809-89191828 None:intergenic 35.0%
ACAAGAATTTCTCAAAGAGG+AGG + Chr1:89190745-89190764 None:intergenic 35.0%
ACATATACTTTGGCAGGATA+GGG + Chr1:89190133-89190152 None:intergenic 35.0%
ACCCCGAGATATAATTAAGA+TGG + Chr1:89190354-89190373 None:intergenic 35.0%
ACTTATAGAGTTAGTTGACG+AGG - Chr1:89193837-89193856 MsG0180005250.01.T01:intron 35.0%
AGGAACTCATTAGGATAAAG+AGG + Chr1:89191019-89191038 None:intergenic 35.0%
AGTTGTGCAAATATGATGTC+AGG + Chr1:89190497-89190516 None:intergenic 35.0%
ATAAGAGGATAGTAGGATAG+AGG - Chr1:89192234-89192253 MsG0180005250.01.T01:intron 35.0%
ATCAATGAAGGAACTCAAGA+AGG - Chr1:89193771-89193790 MsG0180005250.01.T01:intron 35.0%
ATTATATCTCGGGGTATAGT+TGG - Chr1:89190359-89190378 MsG0180005250.01.T01:intron 35.0%
CAAATGAAGACTTTAGACTC+GGG + Chr1:89192369-89192388 None:intergenic 35.0%
CAAATTCAGATTTCCATGGA+TGG + Chr1:89189827-89189846 None:intergenic 35.0%
CAAGAATTTCTCAAAGAGGA+GGG + Chr1:89190744-89190763 None:intergenic 35.0%
CCAAATGAAGACTTTAGACT+CGG + Chr1:89192370-89192389 None:intergenic 35.0%
CTGACTACAAACCAAATTTG+GGG - Chr1:89189741-89189760 MsG0180005250.01.T01:intron 35.0%
GAAAAATGGGTGTGCAAAAT+AGG + Chr1:89191716-89191735 None:intergenic 35.0%
GAATGCCTAAAAAATTAGGC+AGG - Chr1:89189710-89189729 MsG0180005250.01.T01:CDS 35.0%
GATAAAGAGGAGATACAACA+TGG + Chr1:89191006-89191025 None:intergenic 35.0%
GATAACTGAATGTGCTAAGT+CGG - Chr1:89188936-89188955 MsG0180005250.01.T01:CDS 35.0%
GCGTCAAAATAAAATGCTGA+TGG - Chr1:89189617-89189636 MsG0180005250.01.T01:intron 35.0%
GCTCAACAAGAAACAATCAT+AGG + Chr1:89192811-89192830 None:intergenic 35.0%
GTTTATCCCTGAAATATAGG+TGG - Chr1:89192004-89192023 MsG0180005250.01.T01:CDS 35.0%
TAAGAGGATAGTAGGATAGA+GGG - Chr1:89192235-89192254 MsG0180005250.01.T01:intron 35.0%
TAAGTTCCAAGATGCAATCA+AGG - Chr1:89191219-89191238 MsG0180005250.01.T01:intron 35.0%
TACAAAAGAGTAAGTGGTGT+TGG + Chr1:89191482-89191501 None:intergenic 35.0%
TAGCAAAGAGAAGTTAGCAA+TGG + Chr1:89192498-89192517 None:intergenic 35.0%
TCAGATGGCAAAATCAATGA+AGG - Chr1:89193759-89193778 MsG0180005250.01.T01:intron 35.0%
TCCAATATGTTCAAGGATAG+AGG - Chr1:89191771-89191790 MsG0180005250.01.T01:intron 35.0%
TCCTCTATCCTTGAACATAT+TGG + Chr1:89191775-89191794 None:intergenic 35.0%
TGGGATTCTTGGAAGTAATT+TGG - Chr1:89190708-89190727 MsG0180005250.01.T01:intron 35.0%
TGGGTTTATCCCTGAAATAT+AGG - Chr1:89192001-89192020 MsG0180005250.01.T01:CDS 35.0%
TTAGCATCTATTCAATGCTC+TGG - Chr1:89191968-89191987 MsG0180005250.01.T01:CDS 35.0%
TTATATCTCGGGGTATAGTT+GGG - Chr1:89190360-89190379 MsG0180005250.01.T01:intron 35.0%
TTCAAACCTTGATTGCATCT+TGG + Chr1:89191228-89191247 None:intergenic 35.0%
TTCGAGTAGTTAGTTAGTAG+AGG - Chr1:89192199-89192218 MsG0180005250.01.T01:intron 35.0%
TTGAGCATAGAATAGCAGAT+GGG - Chr1:89191558-89191577 MsG0180005250.01.T01:intron 35.0%
TTTGAGCATAGAATAGCAGA+TGG - Chr1:89191557-89191576 MsG0180005250.01.T01:intron 35.0%
! AAGTAACCTTTTGGATGATC+AGG + Chr1:89190540-89190559 None:intergenic 35.0%
! AATGCTCTGGCAAATTCTTT+TGG - Chr1:89191981-89192000 MsG0180005250.01.T01:CDS 35.0%
! ATCCCAAAAAGATTTTCCAG+AGG + Chr1:89190694-89190713 None:intergenic 35.0%
! ATGCTCTGGCAAATTCTTTT+GGG - Chr1:89191982-89192001 MsG0180005250.01.T01:CDS 35.0%
! ATGGGATTGTATTGCTCTTT+TGG - Chr1:89189284-89189303 MsG0180005250.01.T01:intron 35.0%
! TGTTTTACTGCACCATACAA+TGG - Chr1:89192743-89192762 MsG0180005250.01.T01:intron 35.0%
! TTAGCAATGGCAATTGCTTT+TGG + Chr1:89192485-89192504 None:intergenic 35.0%
!! CTCCTCTGGAAAATCTTTTT+GGG - Chr1:89190689-89190708 MsG0180005250.01.T01:intron 35.0%
!! GCCAAACACCATTCTAAAAT+AGG + Chr1:89193453-89193472 None:intergenic 35.0%
!! TCTCCTCTGGAAAATCTTTT+TGG - Chr1:89190688-89190707 MsG0180005250.01.T01:intron 35.0%
!!! AACCTCCTGCCTAATTTTTT+AGG + Chr1:89189718-89189737 None:intergenic 35.0%
!!! CCCTATTTTAGAATGGTGTT+TGG - Chr1:89193449-89193468 MsG0180005250.01.T01:intron 35.0%
AAAAAACCACCTGGAACTGT+TGG + Chr1:89193199-89193218 None:intergenic 40.0%
AAAGGGAACACGTTCCTTTA+TGG - Chr1:89192783-89192802 MsG0180005250.01.T01:intron 40.0%
AAGAATCTGATCACACTACC+AGG + Chr1:89191069-89191088 None:intergenic 40.0%
AAGAGGACAAAAAAACCACC+TGG + Chr1:89193208-89193227 None:intergenic 40.0%
ACACCACCAAAGATATGGAA+TGG + Chr1:89190186-89190205 None:intergenic 40.0%
ACATGAATGTGACTTCTACC+TGG - Chr1:89191048-89191067 MsG0180005250.01.T01:intron 40.0%
ACCTTACACCACCAAAGATA+TGG + Chr1:89190191-89190210 None:intergenic 40.0%
ACTAAACATGAGAAATGGCC+AGG + Chr1:89189971-89189990 None:intergenic 40.0%
AGAAATAGAGAGATCCACCA+AGG + Chr1:89192334-89192353 None:intergenic 40.0%
AGAGAAATTCCAACAGTTCC+AGG - Chr1:89193187-89193206 MsG0180005250.01.T01:intron 40.0%
ATAAGCTTGAGTCACTATGC+AGG - Chr1:89189586-89189605 MsG0180005250.01.T01:CDS 40.0%
ATCTAAATGGTGCCTAGTGA+TGG - Chr1:89192090-89192109 MsG0180005250.01.T01:intron 40.0%
ATGCAAACGTGTATCAACTG+AGG - Chr1:89191168-89191187 MsG0180005250.01.T01:intron 40.0%
ATTACTGCTTGATCTTTCGC+GGG + Chr1:89191808-89191827 None:intergenic 40.0%
CAATGAGACCGAATACCTTA+AGG + Chr1:89194026-89194045 None:intergenic 40.0%
CACATATACTTTGGCAGGAT+AGG + Chr1:89190134-89190153 None:intergenic 40.0%
CACCAAAGATATGGAATGGA+GGG + Chr1:89190182-89190201 None:intergenic 40.0%
CACTTTCCTGATCATCCAAA+AGG - Chr1:89190531-89190550 MsG0180005250.01.T01:intron 40.0%
CTAAACTAGCACACCCAAAT+TGG - Chr1:89191400-89191419 MsG0180005250.01.T01:intron 40.0%
CTAAGTGATTTCGCTTGTAG+TGG - Chr1:89189776-89189795 MsG0180005250.01.T01:intron 40.0%
GAAATAGAGAGATCCACCAA+GGG + Chr1:89192333-89192352 None:intergenic 40.0%
GATGATTGCCTTTCAGCTAA+AGG - Chr1:89192551-89192570 MsG0180005250.01.T01:intron 40.0%
TAAGCTTGAGTCACTATGCA+GGG - Chr1:89189587-89189606 MsG0180005250.01.T01:CDS 40.0%
TGACGGCAAAAGCTACAAAA+AGG + Chr1:89189563-89189582 None:intergenic 40.0%
TGACTCAAGCTTATCTCTGA+CGG + Chr1:89189580-89189599 None:intergenic 40.0%
TGAGAAACACTTAGGGGAAA+TGG - Chr1:89189451-89189470 MsG0180005250.01.T01:intron 40.0%
TGCAAACGTGTATCAACTGA+GGG - Chr1:89191169-89191188 MsG0180005250.01.T01:intron 40.0%
TGCCTAAAAAATTAGGCAGG+AGG - Chr1:89189713-89189732 MsG0180005250.01.T01:CDS 40.0%
TGCTAACTTCTCTTTGCTAC+AGG - Chr1:89192499-89192518 MsG0180005250.01.T01:intron 40.0%
TGGTTGTTGCTACTGATATG+TGG - Chr1:89190941-89190960 MsG0180005250.01.T01:intron 40.0%
! AAAATTAGTCCTTGGTGGGT+TGG - Chr1:89189867-89189886 MsG0180005250.01.T01:intron 40.0%
! AGTCAGATTAGCCCCAAATT+TGG + Chr1:89189755-89189774 None:intergenic 40.0%
! ATTCTCTCTGGTGCCAATTT+GGG + Chr1:89191416-89191435 None:intergenic 40.0%
! CCGAGTCTAAAGTCTTCATT+TGG - Chr1:89192367-89192386 MsG0180005250.01.T01:intron 40.0%
! TAAGGTATTCGGTCTCATTG+CGG - Chr1:89194026-89194045 MsG0180005250.01.T01:intron 40.0%
! TACCAAACGTTTGGAATGGA+GGG - Chr1:89190454-89190473 MsG0180005250.01.T01:intron 40.0%
!! AAATCAGAACCAGAAGTGCT+AGG + Chr1:89193480-89193499 None:intergenic 40.0%
!! AAATTAGTCCTTGGTGGGTT+GGG - Chr1:89189868-89189887 MsG0180005250.01.T01:intron 40.0%
!! TCCATATCTTTGGTGGTGTA+AGG - Chr1:89190187-89190206 MsG0180005250.01.T01:intron 40.0%
!!! GGATGTTAGTTTTGCACTAG+AGG + Chr1:89190003-89190022 None:intergenic 40.0%
!!! TGTTAGTTTTGCACTAGAGG+TGG + Chr1:89190000-89190019 None:intergenic 40.0%
AACCCAGCCACCTATATTTC+AGG + Chr1:89192014-89192033 None:intergenic 45.0%
AAGAGTAGAGATGTCCATCC+AGG + Chr1:89191691-89191710 None:intergenic 45.0%
AATGGAGGGAGTTGTTTAGG+AGG + Chr1:89190168-89190187 None:intergenic 45.0%
ACATGAGGAAAGATCTGCTC+AGG - Chr1:89193076-89193095 MsG0180005250.01.T01:intron 45.0%
ACCAGAGAGAATCGAACCTA+AGG - Chr1:89191424-89191443 MsG0180005250.01.T01:intron 45.0%
ACCCAGCCACCTATATTTCA+GGG + Chr1:89192013-89192032 None:intergenic 45.0%
AGGACATGAAAGAGCCAGAA+AGG + Chr1:89190916-89190935 None:intergenic 45.0%
AGGCCTCACATTTGCATTCA+GGG - Chr1:89190658-89190677 MsG0180005250.01.T01:intron 45.0%
ATCCCTGAAATATAGGTGGC+TGG - Chr1:89192008-89192027 MsG0180005250.01.T01:CDS 45.0%
ATGGAGGGAGTTGTTTAGGA+GGG + Chr1:89190167-89190186 None:intergenic 45.0%
CAGTAGCAACAACCATGACT+AGG + Chr1:89190936-89190955 None:intergenic 45.0%
CCACCAAAGATATGGAATGG+AGG + Chr1:89190183-89190202 None:intergenic 45.0%
CCTCCATTCCATATCTTTGG+TGG - Chr1:89190180-89190199 MsG0180005250.01.T01:intron 45.0%
CTCCCTCCATTCCATATCTT+TGG - Chr1:89190177-89190196 MsG0180005250.01.T01:intron 45.0%
GAAATTCCAACAGTTCCAGG+TGG - Chr1:89193190-89193209 MsG0180005250.01.T01:intron 45.0%
GCAAACGTGTATCAACTGAG+GGG - Chr1:89191170-89191189 MsG0180005250.01.T01:intron 45.0%
GCTCTTTCATGTCCTAGTCA+TGG - Chr1:89190921-89190940 MsG0180005250.01.T01:intron 45.0%
GGACATGAAAGAGCCAGAAA+GGG + Chr1:89190915-89190934 None:intergenic 45.0%
GGGGTATAGTTGGGAAACAA+AGG - Chr1:89190369-89190388 MsG0180005250.01.T01:intron 45.0%
TAGGCCTCACATTTGCATTC+AGG - Chr1:89190657-89190676 MsG0180005250.01.T01:intron 45.0%
TATCAGGCTCGAAGAACGAA+AGG - Chr1:89192529-89192548 MsG0180005250.01.T01:intron 45.0%
TCCCTGAAATATAGGTGGCT+GGG - Chr1:89192009-89192028 MsG0180005250.01.T01:CDS 45.0%
TCCTACCAGTTTCCATCACT+AGG + Chr1:89192105-89192124 None:intergenic 45.0%
TGCGTTCTCCTTTAGCTGAA+AGG + Chr1:89192562-89192581 None:intergenic 45.0%
TGCTACAGGATGTGAGTATC+AGG - Chr1:89192513-89192532 MsG0180005250.01.T01:intron 45.0%
TGGAATGGAGGGAGTTGTTT+AGG + Chr1:89190171-89190190 None:intergenic 45.0%
TGTACACAAGTGCCTCATCA+AGG + Chr1:89189909-89189928 None:intergenic 45.0%
TTAACCCACACCCACTTAGT+GGG - Chr1:89191856-89191875 MsG0180005250.01.T01:intron 45.0%
TTATCCCACTAAGTGGGTGT+GGG + Chr1:89191863-89191882 None:intergenic 45.0%
TTGCCCTGAATGCAAATGTG+AGG + Chr1:89190664-89190683 None:intergenic 45.0%
TTTGCAGAAGAGGAAACCCT+TGG - Chr1:89192314-89192333 MsG0180005250.01.T01:intron 45.0%
! ACAAGCCTTATCCCACTAAG+TGG + Chr1:89191870-89191889 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr1:89191869-89191888 None:intergenic 45.0%
! CAGTGACTCTTTTGCAGAAG+AGG - Chr1:89192304-89192323 MsG0180005250.01.T01:intron 45.0%
! CTACCAAACGTTTGGAATGG+AGG - Chr1:89190453-89190472 MsG0180005250.01.T01:intron 45.0%
! GATTCTCTCTGGTGCCAATT+TGG + Chr1:89191417-89191436 None:intergenic 45.0%
! GTCGTCCTTTTCCATCATTG+TGG - Chr1:89193730-89193749 MsG0180005250.01.T01:intron 45.0%
! GTGATGGAAACTGGTAGGAA+TGG - Chr1:89192106-89192125 MsG0180005250.01.T01:intron 45.0%
!! AAGAGTAAGTGGTGTTGGCT+TGG + Chr1:89191477-89191496 None:intergenic 45.0%
!! AGAGTAAGTGGTGTTGGCTT+GGG + Chr1:89191476-89191495 None:intergenic 45.0%
!!! CGGGTTTTAGTTTCCATCCA+TGG - Chr1:89189811-89189830 MsG0180005250.01.T01:intron 45.0%
!!! TATCTTTTCTAGCTGGCCCA+TGG - Chr1:89192429-89192448 MsG0180005250.01.T01:intron 45.0%
!! CAAAAAAAAAAAAAAAAAAA+AGG + Chr1:89191374-89191393 None:intergenic 5.0%
!! TATTCTATAATATATAAATA+GGG - Chr1:89193900-89193919 MsG0180005250.01.T01:intron 5.0%
AAAGACAGGGTGAGCATTCC+TGG - Chr1:89191670-89191689 MsG0180005250.01.T01:intron 50.0%
AGATGAAACCCAACCCACCA+AGG + Chr1:89189879-89189898 None:intergenic 50.0%
ATTTGGAAGTCCAATGCCGC+TGG - Chr1:89190572-89190591 MsG0180005250.01.T01:intron 50.0%
CAACTGAGGGGCAAAACTTG+AGG - Chr1:89191182-89191201 MsG0180005250.01.T01:intron 50.0%
CACACCCACTTAGTGGGATA+AGG - Chr1:89191862-89191881 MsG0180005250.01.T01:intron 50.0%
CATCTTGCACTGCCTTGATG+AGG - Chr1:89189894-89189913 MsG0180005250.01.T01:intron 50.0%
CGTTTGCAGCTGACAACTGA+TGG - Chr1:89193164-89193183 MsG0180005250.01.T01:intron 50.0%
CTCCCTCCATTCCAAACGTT+TGG + Chr1:89190459-89190478 None:intergenic 50.0%
CTTATCCCACTAAGTGGGTG+TGG + Chr1:89191864-89191883 None:intergenic 50.0%
GAATCGAACCTAAGGCCTTG+AGG - Chr1:89191432-89191451 MsG0180005250.01.T01:intron 50.0%
GCCTTAGGTTCGATTCTCTC+TGG + Chr1:89191428-89191447 None:intergenic 50.0%
GGAAACTAAAACCCGTGACC+AGG + Chr1:89189806-89189825 None:intergenic 50.0%
GTTAACCCACACCCACTTAG+TGG - Chr1:89191855-89191874 MsG0180005250.01.T01:intron 50.0%
TCAGGGCAATTACTCTCCTC+TGG - Chr1:89190675-89190694 MsG0180005250.01.T01:intron 50.0%
TGAAGAAGGGTAGCATGTCC+TGG - Chr1:89189950-89189969 MsG0180005250.01.T01:intron 50.0%
TGAGCAGCAATATGCCCAGA+AGG - Chr1:89192906-89192925 MsG0180005250.01.T01:intron 50.0%
TGAGGGGCAAAACTTGAGGA+TGG - Chr1:89191186-89191205 MsG0180005250.01.T01:intron 50.0%
TGGAGGGAGTTGTTTAGGAG+GGG + Chr1:89190166-89190185 None:intergenic 50.0%
TTGAGGAGGAGCAAACTCCA+AGG - Chr1:89191449-89191468 MsG0180005250.01.T01:intron 50.0%
TTGGCTGATCCTAGCACTTC+TGG - Chr1:89193468-89193487 MsG0180005250.01.T01:intron 50.0%
! GCCTAGTGATGGAAACTGGT+AGG - Chr1:89192101-89192120 MsG0180005250.01.T01:intron 50.0%
! GCGGCATTGGACTTCCAAAT+AGG + Chr1:89190572-89190591 None:intergenic 50.0%
! TGGTGCCTAGTGATGGAAAC+TGG - Chr1:89192097-89192116 MsG0180005250.01.T01:intron 50.0%
! TGTAGTGGAACACCTGGTCA+CGG - Chr1:89189791-89189810 MsG0180005250.01.T01:intron 50.0%
! TTCGCTTGTAGTGGAACACC+TGG - Chr1:89189785-89189804 MsG0180005250.01.T01:intron 50.0%
! TTGGAGTTTGCTCCTCCTCA+AGG + Chr1:89191450-89191469 None:intergenic 50.0%
ACAGGGTGAGCATTCCTGGA+TGG - Chr1:89191674-89191693 MsG0180005250.01.T01:intron 55.0%
ACTGCTTGATCTTTCGCGGG+AGG + Chr1:89191805-89191824 None:intergenic 55.0%
ATCGCTATGCCGGTCACTTC+AGG - Chr1:89194162-89194181 MsG0180005250.01.T01:intron 55.0%
CCTCCCACAGCTCAAAAGCT+GGG - Chr1:89192703-89192722 MsG0180005250.01.T01:intron 55.0%
CGAGCGCTTGAAGAAACAGC+TGG - Chr1:89194108-89194127 MsG0180005250.01.T01:intron 55.0%
GCACTTGTGTACAGAGCTGC+TGG - Chr1:89189916-89189935 MsG0180005250.01.T01:intron 55.0%
GCAGAAGAGGAAACCCTTGG+TGG - Chr1:89192317-89192336 MsG0180005250.01.T01:intron 55.0%
GGGAGGGGTGAAACAAATGC+AGG + Chr1:89192689-89192708 None:intergenic 55.0%
TCCTCTCTGCCTGAAGTGAC+CGG + Chr1:89194174-89194193 None:intergenic 55.0%
TCGAACCTAAGGCCTTGAGG+AGG - Chr1:89191435-89191454 MsG0180005250.01.T01:intron 55.0%
TTGCTCCTCCTCAAGGCCTT+AGG + Chr1:89191443-89191462 None:intergenic 55.0%
! AGAGCCCAGCTTTTGAGCTG+TGG + Chr1:89192710-89192729 None:intergenic 55.0%
! CAGCTTTTGAGCTGTGGGAG+GGG + Chr1:89192704-89192723 None:intergenic 55.0%
! CCAGCTTTTGAGCTGTGGGA+GGG + Chr1:89192705-89192724 None:intergenic 55.0%
! GAGCCCAGCTTTTGAGCTGT+GGG + Chr1:89192709-89192728 None:intergenic 55.0%
! GTAGTGGAACACCTGGTCAC+GGG - Chr1:89189792-89189811 MsG0180005250.01.T01:intron 55.0%
CCCTCCCACAGCTCAAAAGC+TGG - Chr1:89192702-89192721 MsG0180005250.01.T01:intron 60.0%
GCTTGATCTTTCGCGGGAGG+TGG + Chr1:89191802-89191821 None:intergenic 60.0%
! CCCAGCTTTTGAGCTGTGGG+AGG + Chr1:89192706-89192725 None:intergenic 60.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + Chr1:89191469-89191488 None:intergenic 60.0%
GCCGGTCACTTCAGGCAGAG+AGG - Chr1:89194170-89194189 MsG0180005250.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 89188934 89194249 89188934 ID=MsG0180005250.01;Name=MsG0180005250.01
Chr1 mRNA 89188934 89194249 89188934 ID=MsG0180005250.01.T01;Parent=MsG0180005250.01;Name=MsG0180005250.01.T01;_AED=0.50;_eAED=0.68;_QI=0|0.3|0.18|1|0.3|0.27|11|0|338
Chr1 exon 89194211 89194249 89194211 ID=MsG0180005250.01.T01:exon:14577;Parent=MsG0180005250.01.T01
Chr1 exon 89194047 89194119 89194047 ID=MsG0180005250.01.T01:exon:14576;Parent=MsG0180005250.01.T01
Chr1 exon 89193535 89193612 89193535 ID=MsG0180005250.01.T01:exon:14575;Parent=MsG0180005250.01.T01
Chr1 exon 89193246 89193308 89193246 ID=MsG0180005250.01.T01:exon:14574;Parent=MsG0180005250.01.T01
Chr1 exon 89191943 89192100 89191943 ID=MsG0180005250.01.T01:exon:14573;Parent=MsG0180005250.01.T01
Chr1 exon 89190601 89190662 89190601 ID=MsG0180005250.01.T01:exon:14572;Parent=MsG0180005250.01.T01
Chr1 exon 89190256 89190322 89190256 ID=MsG0180005250.01.T01:exon:14571;Parent=MsG0180005250.01.T01
Chr1 exon 89189694 89189745 89189694 ID=MsG0180005250.01.T01:exon:14570;Parent=MsG0180005250.01.T01
Chr1 exon 89189543 89189631 89189543 ID=MsG0180005250.01.T01:exon:14569;Parent=MsG0180005250.01.T01
Chr1 exon 89189305 89189420 89189305 ID=MsG0180005250.01.T01:exon:14568;Parent=MsG0180005250.01.T01
Chr1 exon 89188934 89189153 89188934 ID=MsG0180005250.01.T01:exon:14567;Parent=MsG0180005250.01.T01
Chr1 CDS 89194211 89194249 89194211 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89194047 89194119 89194047 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89193535 89193612 89193535 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89193246 89193308 89193246 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89191943 89192100 89191943 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89190601 89190662 89190601 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89190256 89190322 89190256 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89189694 89189745 89189694 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89189543 89189631 89189543 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89189305 89189420 89189305 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Chr1 CDS 89188934 89189153 89188934 ID=MsG0180005250.01.T01:cds;Parent=MsG0180005250.01.T01
Gene Sequence

>MsG0180005250.01.T01

ATGATAACTGAATGTGCTAAGTCGGCTAACATATTAACTAAACCAGTTTCTATTACATTACAGTCATCTAATTCTGCTGATGACAAAGCTATTAGTTCATTCTACAGAAACGCTTTTGCCGTCAGAGATAAGCTTGAGTCACTATGCAGGGAGTTACAGCGTCAAAATAAAATGCTGATGGTATTCTTCTTCCTTGGTGGGTTGGGTTTCATCTTGCACTGCCTTGATGAGGCACTTGTGTACAGAGCTGCTGATTCTTATTTATTTTACTTCAAGAGCAACATTTTGACTCTGTTAATGAAAAAACTAGGATTCATGTTCCATTATTTTCAGGAAGAATGCAAACGTGTATCAACTGAGGGGCAAAACTTGAGGATGGACTTGTCAGCTAAGTTCCAAGATGCAATCAAGGATGTGAGTATCAGGCTCGAAGAACGAAAGGATGATTGCCTTTCAGCTAAAGGAGAACGCATGTTAAGAAACAATTTAAAGCAACTTGCTGAGCAATATGAACTATCTGAGCAGCAATATGCCCAGAAGTGGATACTTATCCCTATTTTAGAATGGTGTTTGGCTGATCCTAGCACTTCTGATTGTATGTTTCAAACATGCATTGAATTTCAGGAAGCATTGACAAAGAGCAATGATGTATTTGAAACATTTAAACAAGAGATTGAGAAGATGGCAAAATCAATGAAGGAACTCAAGAAGGAGAATCAATTTTTGAAGAGTAAATCAGAAAAGTCTGATATTACACTTATAGAGTTAGTTGACGAGGTACATTGCTTGCGTTTCCTGTATTCGGTCTCATTGCGGTTCCATATTTTTAAAAATGAATCAACAATGAATTTTTGCTTTTCATTGTCTGAACAGCGCGAGCGCTTGAAGAAACAGCTGGAGAAAACGAAAAATCAAAAAGAAAAACTTGAATCGCTATGCCGGTCACTTCAGGCAGAGAGGAAGCAAAGTTTATCCGAGAACAAGAGTAATAATAGTAACAACTCGGCTCCAATATGA

Protein sequence

>MsG0180005250.01.T01

MITECAKSANILTKPVSITLQSSNSADDKAISSFYRNAFAVRDKLESLCRELQRQNKMLMVFFFLGGLGFILHCLDEALVYRAADSYLFYFKSNILTLLMKKLGFMFHYFQEECKRVSTEGQNLRMDLSAKFQDAIKDVSIRLEERKDDCLSAKGERMLRNNLKQLAEQYELSEQQYAQKWILIPILEWCLADPSTSDCMFQTCIEFQEALTKSNDVFETFKQEIEKMAKSMKELKKENQFLKSKSEKSDITLIELVDEVHCLRFLYSVSLRFHIFKNESTMNFCFSLSEQRERLKKQLEKTKNQKEKLESLCRSLQAERKQSLSENKSNNSNNSAPI*