AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008515.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008515.01.T01 MTR_2g044550 92.174 805 13 4 1 802 1 758 0.0 1512
MsG0280008515.01.T01 MTR_8g022980 58.435 818 264 14 1 802 2 759 0.0 886
MsG0280008515.01.T01 MTR_8g022980 60.619 678 205 10 139 802 2 631 0.0 773
MsG0280008515.01.T01 MTR_8g022980 61.084 609 179 8 204 802 2 562 0.0 691
MsG0280008515.01.T01 MTR_8g038730 53.093 194 74 5 1 189 2 183 3.61e-57 194
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008515.01.T01 AT3G43240 61.042 806 244 13 2 801 1 742 0.0 927

Find 172 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAAACCATTGTGCTTAAT+TGG 0.111739 2:+33267708 None:intergenic
AAGTAAACTAATTGTGTTTA+AGG 0.120188 2:+33265438 None:intergenic
ACATATCGATTTCGTATCTT+AGG 0.121783 2:-33272628 MsG0280008515.01.T01:five_prime_UTR
GAAGGATGTTATGCAATTTC+TGG 0.125220 2:-33267448 MsG0280008515.01.T01:CDS
CTAATTCCTGGGTTTCTTAA+AGG 0.138480 2:-33272429 MsG0280008515.01.T01:five_prime_UTR
CTTTAAGAAACCCAGGAATT+AGG 0.159302 2:+33272430 None:intergenic
ACTCACGGTATTAGGTAATT+TGG 0.204870 2:+33271668 None:intergenic
CCCTCAAAATATCCTGAAAA+AGG 0.204985 2:+33267777 None:intergenic
TTCTGCTCATATATCACTTT+TGG 0.235466 2:-33269117 MsG0280008515.01.T01:CDS
TTAAAAGGATGCGTGCTTAT+TGG 0.242537 2:-33270330 MsG0280008515.01.T01:intron
ACAATTGTAGTAATTGTTAT+AGG 0.250047 2:-33270160 MsG0280008515.01.T01:intron
CCAATTAAGCACAATGGTTT+AGG 0.256560 2:-33267708 MsG0280008515.01.T01:CDS
GTCTTGACACACCCTGAAAA+TGG 0.263487 2:+33272231 None:intergenic
GAGTACCTTACACTATTTAC+TGG 0.275735 2:-33271303 MsG0280008515.01.T01:CDS
GCAAGGACTCGGAGCATTTA+AGG 0.276262 2:-33266213 MsG0280008515.01.T01:intron
AGTCTTGTTAATTAGTGATT+TGG 0.276546 2:-33265573 MsG0280008515.01.T01:three_prime_UTR
TTCTTAGCAAAACTTCGATT+TGG 0.283092 2:-33272587 MsG0280008515.01.T01:five_prime_UTR
CTGGGTTGATTTGTAGTATT+GGG 0.287319 2:-33272372 MsG0280008515.01.T01:five_prime_UTR
TTTAAGAAACCCAGGAATTA+GGG 0.297160 2:+33272431 None:intergenic
TGTGGTGAGTGGGCTCATTT+TGG 0.301828 2:-33266248 MsG0280008515.01.T01:CDS
TTAACTCTAGAGCATGATTC+TGG 0.305574 2:+33267909 None:intergenic
CACCAAACACTCACGGTATT+AGG 0.305701 2:+33271660 None:intergenic
GGCAGAGGCACTACATTCTA+AGG 0.308299 2:-33271528 MsG0280008515.01.T01:intron
TCTTAGCAAAACTTCGATTT+GGG 0.317494 2:-33272586 MsG0280008515.01.T01:five_prime_UTR
TTCCGGAACTTTCTTCGTTC+GGG 0.321766 2:-33272100 MsG0280008515.01.T01:CDS
TAATTCCTGGGTTTCTTAAA+GGG 0.327444 2:-33272428 MsG0280008515.01.T01:five_prime_UTR
AACTGCAAATGGTTATTAAC+AGG 0.332403 2:-33265716 MsG0280008515.01.T01:exon
AATAATCCACACAAGGCTTC+CGG 0.335869 2:+33271696 None:intergenic
GCTAGAGAAAACAATATCTT+TGG 0.338685 2:+33267980 None:intergenic
AATACGAGATTTCTTCTTTG+TGG 0.345310 2:-33270479 MsG0280008515.01.T01:CDS
TTTCCGGAACTTTCTTCGTT+CGG 0.347309 2:-33272101 MsG0280008515.01.T01:CDS
CAAGAGGAGGCTTTCATGTT+GGG 0.358461 2:-33267235 MsG0280008515.01.T01:CDS
AGTCTTCTTGCTGTTCTTAG+TGG 0.359874 2:-33272203 MsG0280008515.01.T01:CDS
ATAATCCACACAAGGCTTCC+GGG 0.375399 2:+33271697 None:intergenic
GTAGTATTGGGAAGTTGTTT+TGG 0.379941 2:-33272360 MsG0280008515.01.T01:five_prime_UTR
TCTGGGTTGATTTGTAGTAT+TGG 0.384513 2:-33272373 MsG0280008515.01.T01:five_prime_UTR
TTAGCATTCAGAACGGCATC+AGG 0.387346 2:+33267375 None:intergenic
GAAATTGCATAACATCCTTC+AGG 0.387823 2:+33267451 None:intergenic
TTCTGTGCTTGATCCTCAAT+TGG 0.387951 2:-33265628 MsG0280008515.01.T01:three_prime_UTR
ATTGGTAAAGGTAGGTTTGT+AGG 0.388619 2:-33265610 MsG0280008515.01.T01:three_prime_UTR
ACAGTAGCGCAGCAGGTGAC+TGG 0.395006 2:-33266286 MsG0280008515.01.T01:intron
GTGGATTCAAAGATATTATC+TGG 0.397675 2:+33267634 None:intergenic
TTAGACGATAGTGGAGAAAT+CGG 0.403709 2:-33271753 MsG0280008515.01.T01:CDS
ACCTCTGAGCAAACTCGTAT+TGG 0.406911 2:+33267579 None:intergenic
GTGCTTATTGGAGTCATTAG+AGG 0.416010 2:-33270318 MsG0280008515.01.T01:CDS
ACGAAGAAAGTTCCGGAAAC+GGG 0.417940 2:+33272105 None:intergenic
TTCTTCGTTCGGGCGACTTG+AGG 0.424131 2:-33272090 MsG0280008515.01.T01:intron
CATATCGATTTCGTATCTTA+GGG 0.427252 2:-33272627 MsG0280008515.01.T01:five_prime_UTR
AACGAAGAAAGTTCCGGAAA+CGG 0.427488 2:+33272104 None:intergenic
CATGGACCAACCTCAATGTT+AGG 0.430423 2:+33270578 None:intergenic
TTGGGCGTTGCTAGTATTCA+AGG 0.430652 2:-33268083 MsG0280008515.01.T01:CDS
TGGCGATGAGACTGAGGGAT+TGG 0.441828 2:+33267810 None:intergenic
AAACCTACCTTTACCAATTG+AGG 0.447186 2:+33265615 None:intergenic
ATGTTGGGAATGGTATCAAT+TGG 0.448776 2:-33267220 MsG0280008515.01.T01:CDS
AGACGCTTGTTTCAATGATC+AGG 0.449178 2:-33269081 MsG0280008515.01.T01:CDS
TTTGTATGCGTGTTCCTACA+TGG 0.452207 2:-33268823 MsG0280008515.01.T01:CDS
GGTTTATTTGGAAACTCCTA+AGG 0.454681 2:-33271561 MsG0280008515.01.T01:CDS
AGTGGTAGGCTTGGATACTT+TGG 0.455592 2:-33270444 MsG0280008515.01.T01:intron
GGGGATGTAAACTTCAAAAT+CGG 0.456380 2:-33269358 MsG0280008515.01.T01:CDS
CCTTGCAAGTAAACAAAATC+CGG 0.457763 2:+33271783 None:intergenic
ATGCAATTTCTGGTTCTTCG+AGG 0.457774 2:-33267438 MsG0280008515.01.T01:CDS
CGCCCGAACGAAGAAAGTTC+CGG 0.466593 2:+33272098 None:intergenic
TTGAAGATAATGGCAGTGAT+AGG 0.469399 2:-33267860 MsG0280008515.01.T01:CDS
GAAACAAGCGTCTGCACTAC+CGG 0.469950 2:+33269091 None:intergenic
ATCCAAGCCTACCACTGTGC+AGG 0.475502 2:+33270451 None:intergenic
GTTCATGGCTAGGAATTGCC+TGG 0.478110 2:+33268915 None:intergenic
TCCTTCGTGTCTGCTTCACA+TGG 0.479727 2:+33270560 None:intergenic
CGTTCTGAATGCTAAACGTC+TGG 0.484571 2:-33267367 MsG0280008515.01.T01:CDS
TTTCCTAGAGCCAATGTACA+TGG 0.486337 2:-33265676 MsG0280008515.01.T01:three_prime_UTR
TTCAGATAACTTCATATGCA+TGG 0.487439 2:-33270189 MsG0280008515.01.T01:intron
GTTGGAAAGCATCCCATGTA+TGG 0.489682 2:+33270705 None:intergenic
CGAGCAAGTTCATCGAAAGT+AGG 0.491578 2:+33271825 None:intergenic
TGTGATAGGCGGCAAGGACT+CGG 0.492876 2:-33266224 MsG0280008515.01.T01:CDS
ACGAGAATCAGTGACCCATT+TGG 0.495130 2:+33272507 None:intergenic
TCTAGAGCATGATTCTGGTT+CGG 0.495832 2:+33267914 None:intergenic
TTTATAGATGAACTAGTCTC+AGG 0.496117 2:+33270521 None:intergenic
AAATCGCAGAAAACTGCAAA+TGG 0.497504 2:-33265727 MsG0280008515.01.T01:CDS
GGTCAGCAGTTAGACGATAG+TGG 0.498232 2:-33271762 MsG0280008515.01.T01:CDS
CTACGCGAAAACTGATGGGC+TGG 0.498424 2:-33265791 MsG0280008515.01.T01:CDS
ACAAGGCTTCCGGGGTAGAC+AGG 0.498979 2:+33271706 None:intergenic
TGTTCCTACATGGGCTTCAC+AGG 0.500006 2:-33268813 MsG0280008515.01.T01:intron
CTGTGGTATGTGTGGTGAGT+GGG 0.501449 2:-33266258 MsG0280008515.01.T01:CDS
CGAAAATAGTCAACTTGTCC+AGG 0.502280 2:-33268933 MsG0280008515.01.T01:CDS
GGATTTCCCTGCACAGTGGT+AGG 0.503278 2:-33270458 MsG0280008515.01.T01:CDS
TCCCTGCACAGTGGTAGGCT+TGG 0.504321 2:-33270453 MsG0280008515.01.T01:CDS
TAGCAACGCCCAACATAACT+AGG 0.506017 2:+33268093 None:intergenic
TGCAATTTCTGGTTCTTCGA+GGG 0.506895 2:-33267437 MsG0280008515.01.T01:CDS
TGAAGCAGACACGAAGGAAG+AGG 0.507245 2:-33270555 MsG0280008515.01.T01:CDS
TCAAGAGGAGGCTTTCATGT+TGG 0.508202 2:-33267236 MsG0280008515.01.T01:CDS
ATACCGCTGCCTAGTTATGT+TGG 0.508828 2:-33268102 MsG0280008515.01.T01:CDS
TACCGCTGCCTAGTTATGTT+GGG 0.511203 2:-33268101 MsG0280008515.01.T01:CDS
GTCAACAACAGTAGCGCAGC+AGG 0.516609 2:-33266293 MsG0280008515.01.T01:intron
CAGGACTACGCGAAAACTGA+TGG 0.518231 2:-33265796 MsG0280008515.01.T01:CDS
GCTGCTTGGAGAGGAGGTGG+TGG 0.523024 2:+33269191 None:intergenic
CAGAAGGGCAGCGGTAAGCA+TGG 0.527863 2:-33270623 MsG0280008515.01.T01:CDS
GATCTTCGAGGCTCGTATGA+AGG 0.532815 2:+33268881 None:intergenic
ACAAAATCAGAAGCAGAAGC+AGG 0.536579 2:-33272162 MsG0280008515.01.T01:CDS
TTGTATGCGTGTTCCTACAT+GGG 0.540688 2:-33268822 MsG0280008515.01.T01:CDS
TTAGCTCATGATGATGTAGA+TGG 0.541719 2:-33266425 MsG0280008515.01.T01:CDS
GTAGTACATCCAGCCATACA+TGG 0.542147 2:-33270718 MsG0280008515.01.T01:intron
AATGCTGCTTATTGTGTCAC+AGG 0.542245 2:-33266400 MsG0280008515.01.T01:intron
CGGGGAACCTCCTAACATTG+AGG 0.543799 2:-33270588 MsG0280008515.01.T01:CDS
TTCAAACACACTAGATCCAC+AGG 0.544026 2:+33268847 None:intergenic
AGTTCTAGAACAACTGCAGC+CGG 0.546683 2:-33271802 MsG0280008515.01.T01:CDS
GCTACTGAAGCTGATCTTCG+AGG 0.548233 2:+33268869 None:intergenic
GAGAAATCGGGTCTCTTGTG+TGG 0.548757 2:-33271740 MsG0280008515.01.T01:CDS
GGAGGCTTTCATGTTGGGAA+TGG 0.550648 2:-33267230 MsG0280008515.01.T01:CDS
CAAGGCCACCTTGTGGAATG+AGG 0.556124 2:+33267406 None:intergenic
CTTGTTTCAATGATCAGGCA+CGG 0.556320 2:-33269076 MsG0280008515.01.T01:CDS
GTTGCTGCTTGGAGAGGAGG+TGG 0.556794 2:+33269188 None:intergenic
CAGTAGCGCAGCAGGTGACT+GGG 0.557484 2:-33266285 MsG0280008515.01.T01:CDS
GCTTGATCCTCAATTGGTAA+AGG 0.557537 2:-33265622 MsG0280008515.01.T01:three_prime_UTR
TAAAAGATGACTGAGCAAGT+TGG 0.561412 2:+33270687 None:intergenic
AGAAGGGCAGCGGTAAGCAT+GGG 0.561887 2:-33270622 MsG0280008515.01.T01:CDS
TTGTTTCAATGATCAGGCAC+GGG 0.562754 2:-33269075 MsG0280008515.01.T01:intron
AGGCAGCGGTATGACACGTT+CGG 0.566260 2:+33268113 None:intergenic
TAGACGATAGTGGAGAAATC+GGG 0.570756 2:-33271752 MsG0280008515.01.T01:CDS
GCAGGATGATGATGCTTCTG+AGG 0.573214 2:-33272144 MsG0280008515.01.T01:CDS
CGGCATCAGGGAACTCAGCA+AGG 0.574376 2:+33267388 None:intergenic
GGCGTGAAAGTTGAAGATAA+TGG 0.577013 2:-33267870 MsG0280008515.01.T01:CDS
TTAACACTAGCCATGTACAT+TGG 0.578866 2:+33265666 None:intergenic
CTTAGCAAAACTTCGATTTG+GGG 0.580554 2:-33272585 MsG0280008515.01.T01:five_prime_UTR
TGCGTGAGAATGTTGCTGCT+TGG 0.581290 2:+33269177 None:intergenic
TCCAAGCCTACCACTGTGCA+GGG 0.581847 2:+33270452 None:intergenic
TTTGGTTGTGATAGGCGGCA+AGG 0.582920 2:-33266230 MsG0280008515.01.T01:CDS
GATCCTCAATTGGTAAAGGT+AGG 0.585308 2:-33265618 MsG0280008515.01.T01:three_prime_UTR
TTGTGCTTAATTGGAACAAG+AGG 0.590937 2:+33267717 None:intergenic
AATGTTGCTGCTTGGAGAGG+AGG 0.594965 2:+33269185 None:intergenic
AGAAATCGGGTCTCTTGTGT+GGG 0.595440 2:-33271739 MsG0280008515.01.T01:CDS
GCTGGAGGCATCAACCAACT+AGG 0.596103 2:+33267954 None:intergenic
ACTGTGGTATGTGTGGTGAG+TGG 0.596504 2:-33266259 MsG0280008515.01.T01:CDS
GAACCTCCTAACATTGAGGT+TGG 0.596722 2:-33270584 MsG0280008515.01.T01:CDS
TAGCCATGTACATTGGCTCT+AGG 0.598362 2:+33265673 None:intergenic
TCTACCCCGGAAGCCTTGTG+TGG 0.602418 2:-33271702 MsG0280008515.01.T01:CDS
AGGACTACGCGAAAACTGAT+GGG 0.603153 2:-33265795 MsG0280008515.01.T01:CDS
CTTGTTCCAATTAAGCACAA+TGG 0.603232 2:-33267714 MsG0280008515.01.T01:CDS
CGTAGATATATCACAGCGCA+TGG 0.605358 2:+33269145 None:intergenic
GGGAATGGTATCAATTGGAA+AGG 0.606924 2:-33267215 MsG0280008515.01.T01:CDS
AATTAAGTTTAGCTGCAATG+AGG 0.609605 2:-33267833 MsG0280008515.01.T01:CDS
TAATCCACACAAGGCTTCCG+GGG 0.610738 2:+33271698 None:intergenic
GTTAAATCTATCAATGCTAG+TGG 0.615417 2:-33267891 MsG0280008515.01.T01:CDS
GAGGCATCAACCAACTAGGA+TGG 0.619735 2:+33267958 None:intergenic
CGCCCAACATAACTAGGCAG+CGG 0.627048 2:+33268099 None:intergenic
CATACCTCACAACAGTCAGA+AGG 0.629474 2:-33270639 MsG0280008515.01.T01:CDS
CACAACAGTCAGAAGGGCAG+CGG 0.630640 2:-33270632 MsG0280008515.01.T01:CDS
TGGGTGAACTGTGGTATGTG+TGG 0.638192 2:-33266266 MsG0280008515.01.T01:CDS
TTATTGGAGTCATTAGAGGA+TGG 0.641905 2:-33270314 MsG0280008515.01.T01:CDS
GCATTGGGGTGAAACAGTAG+AGG 0.643928 2:-33272305 MsG0280008515.01.T01:five_prime_UTR
AACTCAGCAAGGCCACCTTG+TGG 0.644829 2:+33267399 None:intergenic
GTTTATTTGGAAACTCCTAA+GGG 0.646559 2:-33271560 MsG0280008515.01.T01:CDS
GAGAATGTTGCTGCTTGGAG+AGG 0.646813 2:+33269182 None:intergenic
TAGCATTCAGAACGGCATCA+GGG 0.648273 2:+33267376 None:intergenic
GGACCAACCTCAATGTTAGG+AGG 0.648984 2:+33270581 None:intergenic
TAGTACATCCAGCCATACAT+GGG 0.649585 2:-33270717 MsG0280008515.01.T01:intron
CTGCCCTTCTGACTGTTGTG+AGG 0.649813 2:+33270635 None:intergenic
AGATCAGCTTCAGTAGCCTG+TGG 0.650358 2:-33268863 MsG0280008515.01.T01:CDS
ATACCTCACAACAGTCAGAA+GGG 0.652494 2:-33270638 MsG0280008515.01.T01:CDS
TTAACCTGTGAAGCCCATGT+AGG 0.655672 2:+33268809 None:intergenic
GCGACAGGAGGAATTCCTGA+AGG 0.657300 2:-33267466 MsG0280008515.01.T01:intron
GGAAGAAAATAATCCACACA+AGG 0.664859 2:+33271689 None:intergenic
CAGACGTTTAGCATTCAGAA+CGG 0.667993 2:+33267368 None:intergenic
GTAAACTTCAAAATCGGACA+AGG 0.680009 2:-33269352 MsG0280008515.01.T01:intron
CATACTCGCCTCATTCCACA+AGG 0.680159 2:-33267414 MsG0280008515.01.T01:CDS
AGCAACATTCTCACGCAGCG+TGG 0.682119 2:-33269171 MsG0280008515.01.T01:CDS
TTGTGGATTTCCCTGCACAG+TGG 0.689802 2:-33270462 MsG0280008515.01.T01:CDS
TCCAATACGAGTTTGCTCAG+AGG 0.694110 2:-33267580 MsG0280008515.01.T01:intron
ACTATACTGTGTGCAAAACG+AGG 0.696352 2:-33270663 MsG0280008515.01.T01:CDS
TCCATGTGAAGCAGACACGA+AGG 0.700858 2:-33270561 MsG0280008515.01.T01:CDS
ACTCGCCTCATTCCACAAGG+TGG 0.716807 2:-33267411 MsG0280008515.01.T01:CDS
GTATGTGCTGAAAAGTGCAA+TGG 0.721527 2:-33269887 MsG0280008515.01.T01:intron
AAATTTGACATGCTGCAGTG+TGG 0.731876 2:+33265757 None:intergenic
GCAGGTGACTGGGTGAACTG+TGG 0.732040 2:-33266275 MsG0280008515.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTTTACTTAATTCTAA+TGG + Chr2:33266311-33266330 None:intergenic 10.0%
!!! ATTTAATGTTTGTTAAAAAT+TGG - Chr2:33269461-33269480 MsG0280008515.01.T01:intron 10.0%
!!! ATTTTTTCAATCTTATAAAT+TGG - Chr2:33265522-33265541 MsG0280008515.01.T01:three_prime_UTR 10.0%
!!! TTTTGTTTTTATTTGTTTTA+AGG - Chr2:33266279-33266298 MsG0280008515.01.T01:CDS 10.0%
!!! TTTTTTCAATCTTATAAATT+GGG - Chr2:33265523-33265542 MsG0280008515.01.T01:three_prime_UTR 10.0%
!!! AATTTTTTTTTACTGTTGTA+GGG - Chr2:33271694-33271713 MsG0280008515.01.T01:CDS 15.0%
!!! TAAATTGTACCTTTTATTTA+TGG - Chr2:33269973-33269992 MsG0280008515.01.T01:intron 15.0%
!!! TAATTTTTTTTTACTGTTGT+AGG - Chr2:33271693-33271712 MsG0280008515.01.T01:CDS 15.0%
!!! TACAATTTTTTGTCAAATAA+CGG - Chr2:33267121-33267140 MsG0280008515.01.T01:intron 15.0%
!!! TTACTTTATATGTTTTTGTT+AGG - Chr2:33266823-33266842 MsG0280008515.01.T01:intron 15.0%
!! AAAAACACTATTCAAGAAAT+AGG + Chr2:33267430-33267449 None:intergenic 20.0%
!! AAACAATCACTTAAATTATG+AGG + Chr2:33268740-33268759 None:intergenic 20.0%
!! AACAATCACTTAAATTATGA+GGG + Chr2:33268739-33268758 None:intergenic 20.0%
!! AAGTAAACTAATTGTGTTTA+AGG + Chr2:33272759-33272778 None:intergenic 20.0%
!! ACAATTGTAGTAATTGTTAT+AGG - Chr2:33268034-33268053 MsG0280008515.01.T01:CDS 20.0%
!! ATTTCCATAATATTGTATAC+AGG + Chr2:33271670-33271689 None:intergenic 20.0%
!! CAAACTTTATGAATAAATTG+AGG - Chr2:33271599-33271618 MsG0280008515.01.T01:intron 20.0%
!! CAATACATATAATTTAAGTC+TGG - Chr2:33269538-33269557 MsG0280008515.01.T01:intron 20.0%
!! CTTAATCAGTGATTATTAAA+CGG - Chr2:33266849-33266868 MsG0280008515.01.T01:intron 20.0%
!! GAAATAAATCAGTTTATAAC+AGG + Chr2:33267830-33267849 None:intergenic 20.0%
!! GAGTATAATTAATGAGATTA+AGG - Chr2:33266762-33266781 MsG0280008515.01.T01:intron 20.0%
!! GTATAAAATCATACTAAACT+AGG + Chr2:33271309-33271328 None:intergenic 20.0%
!! TAATCCAACAAATATAAAGT+TGG + Chr2:33272065-33272084 None:intergenic 20.0%
!! TATGAAATGAAACTGATAAA+AGG - Chr2:33272122-33272141 MsG0280008515.01.T01:CDS 20.0%
!! TATTTCCTTAAATCATTGAA+CGG - Chr2:33268330-33268349 MsG0280008515.01.T01:intron 20.0%
!! TCAAATTAAATTCAACTTTG+AGG - Chr2:33268095-33268114 MsG0280008515.01.T01:CDS 20.0%
!! TGTAATCAATGTATTACTTA+AGG - Chr2:33268174-33268193 MsG0280008515.01.T01:intron 20.0%
!! TTTCCTAAAAGTAAAATTCT+AGG + Chr2:33271149-33271168 None:intergenic 20.0%
!!! AAAGCTAAAACTTTGATTTT+TGG - Chr2:33265792-33265811 MsG0280008515.01.T01:CDS 20.0%
!!! ACTTCTTCTTTTTTCATTAA+TGG - Chr2:33270019-33270038 MsG0280008515.01.T01:intron 20.0%
!!! ATTCAATTCAATTTTGTTTG+TGG - Chr2:33265437-33265456 MsG0280008515.01.T01:three_prime_UTR 20.0%
!!! ATTGTGAAAATGATACTTTT+GGG - Chr2:33271641-33271660 MsG0280008515.01.T01:intron 20.0%
!!! GATATTTTTGTAGGTTTATT+TGG - Chr2:33266621-33266640 MsG0280008515.01.T01:intron 20.0%
!!! GTTTTTGTTATAGTTTTTCT+AGG + Chr2:33268577-33268596 None:intergenic 20.0%
!!! TAATTGTTTTTTCTTTCTCA+AGG - Chr2:33269405-33269424 MsG0280008515.01.T01:intron 20.0%
!!! TATAAATTGGGTTTTTAGTT+TGG - Chr2:33265535-33265554 MsG0280008515.01.T01:three_prime_UTR 20.0%
!!! TTACTTCATGATATTTTTGT+AGG - Chr2:33266612-33266631 MsG0280008515.01.T01:intron 20.0%
!!! TTTTTAAATATTACTGTTCC+TGG - Chr2:33267012-33267031 MsG0280008515.01.T01:intron 20.0%
! AAACTGTAAAACGAAGTTAA+AGG + Chr2:33269902-33269921 None:intergenic 25.0%
! AAAGTACAAGATTCCTAATA+AGG + Chr2:33271247-33271266 None:intergenic 25.0%
! AACAAACAGAATAACATTGT+GGG + Chr2:33268950-33268969 None:intergenic 25.0%
! AGAAACTAGTAAGAAATACA+TGG - Chr2:33271357-33271376 MsG0280008515.01.T01:intron 25.0%
! AGATTTAGAGATTAATGAGT+TGG - Chr2:33268606-33268625 MsG0280008515.01.T01:intron 25.0%
! AGGTATTAATCAACAATATC+AGG - Chr2:33272001-33272020 MsG0280008515.01.T01:intron 25.0%
! CATTATGTTTGTTCCTAATT+GGG - Chr2:33268230-33268249 MsG0280008515.01.T01:intron 25.0%
! CTCAAAATGTAAGATTATCT+AGG + Chr2:33271193-33271212 None:intergenic 25.0%
! TAAATCAGTTTATAACAGGT+AGG + Chr2:33267826-33267845 None:intergenic 25.0%
! TAACAAACAGAATAACATTG+TGG + Chr2:33268951-33268970 None:intergenic 25.0%
! TATATGTGTTAGACACTTTA+TGG - Chr2:33269865-33269884 MsG0280008515.01.T01:intron 25.0%
! TATGTATTGAAGAATTGACT+CGG + Chr2:33269527-33269546 None:intergenic 25.0%
! TATTACTTAAGGCATATGAA+TGG - Chr2:33268185-33268204 MsG0280008515.01.T01:intron 25.0%
! TCATTGTAGCCATAAATAAA+AGG + Chr2:33269985-33270004 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - Chr2:33268638-33268657 MsG0280008515.01.T01:intron 25.0%
! TGTTGGATTATGATCAATAT+AGG - Chr2:33272075-33272094 MsG0280008515.01.T01:intron 25.0%
! TTAGTAATCCATTCCTTATT+AGG - Chr2:33271231-33271250 MsG0280008515.01.T01:intron 25.0%
! TTCTCTTGAGAAAAAAATAC+AGG - Chr2:33272707-33272726 MsG0280008515.01.T01:five_prime_UTR 25.0%
! TTGTAATAGTTCTTACAATG+TGG - Chr2:33267800-33267819 MsG0280008515.01.T01:CDS 25.0%
!! AAGACAATCTATACTTCTTT+TGG - Chr2:33266701-33266720 MsG0280008515.01.T01:intron 25.0%
!! AGACAATCTATACTTCTTTT+GGG - Chr2:33266702-33266721 MsG0280008515.01.T01:intron 25.0%
!! ATTTATGATGTTCCATTTTC+AGG - Chr2:33265951-33265970 MsG0280008515.01.T01:intron 25.0%
!! CATTGTGAAAATGATACTTT+TGG - Chr2:33271640-33271659 MsG0280008515.01.T01:intron 25.0%
!! CTAAGAAACTTGAGTATTTT+AGG - Chr2:33270930-33270949 MsG0280008515.01.T01:intron 25.0%
!! TAATGAGTTGGATTGAAATA+TGG - Chr2:33268618-33268637 MsG0280008515.01.T01:intron 25.0%
!! TTAAATTCAACTTTGAGGAT+AGG - Chr2:33268100-33268119 MsG0280008515.01.T01:CDS 25.0%
!! TTAACTTTTCATGTGAATTC+AGG - Chr2:33266329-33266348 MsG0280008515.01.T01:intron 25.0%
!! TTATCACATTTTTCACCTTT+TGG - Chr2:33268145-33268164 MsG0280008515.01.T01:intron 25.0%
!! TTTATGATGTTCCATTTTCA+GGG - Chr2:33265952-33265971 MsG0280008515.01.T01:intron 25.0%
!! TTTTGTATCATAGCTTCTTT+AGG + Chr2:33268278-33268297 None:intergenic 25.0%
!! TTTTTCCAGTAAATAGTGTA+AGG + Chr2:33266899-33266918 None:intergenic 25.0%
!!! AAGGTAGTTTATTTTGTTCA+TGG + Chr2:33269297-33269316 None:intergenic 25.0%
!!! AATTGTTATAGGTTAGTTTG+TGG - Chr2:33268045-33268064 MsG0280008515.01.T01:CDS 25.0%
!!! ACTACATTCTAAGGTTATAT+TGG - Chr2:33266675-33266694 MsG0280008515.01.T01:intron 25.0%
!!! AGTCTTGTTAATTAGTGATT+TGG - Chr2:33272621-33272640 MsG0280008515.01.T01:five_prime_UTR 25.0%
!!! ATTAAGTTGAATATCCAAAC+AGG + Chr2:33272149-33272168 None:intergenic 25.0%
!!! GCTGTTTTCTTAAACTATAT+TGG - Chr2:33272232-33272251 MsG0280008515.01.T01:CDS 25.0%
!!! GTGTTTTTGTTTATGATAGT+TGG - Chr2:33267442-33267461 MsG0280008515.01.T01:CDS 25.0%
!!! TCTTTTTAACTTGTATAGAG+AGG - Chr2:33270851-33270870 MsG0280008515.01.T01:intron 25.0%
!!! TTGATTTTTGGTTTCTTTCT+GGG - Chr2:33265804-33265823 MsG0280008515.01.T01:intron 25.0%
!!! TTTGATTTTTGGTTTCTTTC+TGG - Chr2:33265803-33265822 MsG0280008515.01.T01:intron 25.0%
!!! TTTTTTCATTAATGGCTTCT+TGG - Chr2:33270027-33270046 MsG0280008515.01.T01:intron 25.0%
AACTGCAAATGGTTATTAAC+AGG - Chr2:33272478-33272497 MsG0280008515.01.T01:five_prime_UTR 30.0%
AAGAAGAAGTTCATGAAGTA+TGG + Chr2:33270009-33270028 None:intergenic 30.0%
AAGGTCAACAAAAACATATG+CGG + Chr2:33270646-33270665 None:intergenic 30.0%
AATACGAGATTTCTTCTTTG+TGG - Chr2:33267715-33267734 MsG0280008515.01.T01:CDS 30.0%
AATCAGTGATTATTAAACGG+AGG - Chr2:33266852-33266871 MsG0280008515.01.T01:intron 30.0%
AATGAGATTAAGGCTAAACT+AGG - Chr2:33266772-33266791 MsG0280008515.01.T01:intron 30.0%
AATTAAGTTTAGCTGCAATG+AGG - Chr2:33270361-33270380 MsG0280008515.01.T01:intron 30.0%
ACAAATATAAAGTTGGCAGA+AGG + Chr2:33272058-33272077 None:intergenic 30.0%
ACAAGATTCCTAATAAGGAA+TGG + Chr2:33271242-33271261 None:intergenic 30.0%
ACACTTCTCTCTTATTACTT+CGG - Chr2:33267334-33267353 MsG0280008515.01.T01:intron 30.0%
ACCTATAATAGTAATGATGG+TGG - Chr2:33268488-33268507 MsG0280008515.01.T01:intron 30.0%
ACTTCTATACCAATACAGAT+AGG - Chr2:33269932-33269951 MsG0280008515.01.T01:CDS 30.0%
ATAACATTGTGGGTAAAAGA+CGG + Chr2:33268940-33268959 None:intergenic 30.0%
ATACTAAACTAGGAACATTG+AGG + Chr2:33271299-33271318 None:intergenic 30.0%
ATATGTTAACTAAGATGTGC+TGG - Chr2:33266735-33266754 MsG0280008515.01.T01:intron 30.0%
ATGAGATTAAGGCTAAACTA+GGG - Chr2:33266773-33266792 MsG0280008515.01.T01:intron 30.0%
ATGATCACCTAAAATGCAAA+TGG - Chr2:33271498-33271517 MsG0280008515.01.T01:intron 30.0%
ATGCAAGGAAATGTTCATTA+AGG + Chr2:33271083-33271102 None:intergenic 30.0%
ATGTAAGATTATCTAGGTAG+AGG + Chr2:33271187-33271206 None:intergenic 30.0%
CACACCTATAATAGTAATGA+TGG - Chr2:33268485-33268504 MsG0280008515.01.T01:intron 30.0%
CCAATTAGGAACAAACATAA+TGG + Chr2:33268232-33268251 None:intergenic 30.0%
CCATTATGTTTGTTCCTAAT+TGG - Chr2:33268229-33268248 MsG0280008515.01.T01:intron 30.0%
CCTCAAAATATCCTGAAAAA+GGG + Chr2:33270419-33270438 None:intergenic 30.0%
GCATCCTGTATACAATATTA+TGG - Chr2:33271663-33271682 MsG0280008515.01.T01:intron 30.0%
GCTAGAGAAAACAATATCTT+TGG + Chr2:33270217-33270236 None:intergenic 30.0%
GTGGATTCAAAGATATTATC+TGG + Chr2:33270563-33270582 None:intergenic 30.0%
GTTAAATCTATCAATGCTAG+TGG - Chr2:33270303-33270322 MsG0280008515.01.T01:CDS 30.0%
GTTTATTTGGAAACTCCTAA+GGG - Chr2:33266634-33266653 MsG0280008515.01.T01:intron 30.0%
TAACAAAATAACCAACTTCG+TGG + Chr2:33271558-33271577 None:intergenic 30.0%
TAATTCCTGGGTTTCTTAAA+GGG - Chr2:33265766-33265785 MsG0280008515.01.T01:CDS 30.0%
TCCACCATCATTACTATTAT+AGG + Chr2:33268492-33268511 None:intergenic 30.0%
TCTGCCAACTTTATATTTGT+TGG - Chr2:33272058-33272077 MsG0280008515.01.T01:intron 30.0%
TCTTAGCAAAACTTCGATTT+GGG - Chr2:33265608-33265627 MsG0280008515.01.T01:three_prime_UTR 30.0%
TGCTCAGTAAAAAGTTAAGA+GGG + Chr2:33269183-33269202 None:intergenic 30.0%
TGTAAGATTATCTAGGTAGA+GGG + Chr2:33271186-33271205 None:intergenic 30.0%
TTCAGATAACTTCATATGCA+TGG - Chr2:33268005-33268024 MsG0280008515.01.T01:CDS 30.0%
TTCCGTTAAAAATTATAGCC+AGG - Chr2:33269796-33269815 MsG0280008515.01.T01:intron 30.0%
TTCTTAGCAAAACTTCGATT+TGG - Chr2:33265607-33265626 MsG0280008515.01.T01:three_prime_UTR 30.0%
TTGATTACATTGTCTCCAAA+AGG + Chr2:33268163-33268182 None:intergenic 30.0%
TTGTACTAAATAGCATGTCT+CGG + Chr2:33267106-33267125 None:intergenic 30.0%
TTGTCAAATAGAAGCTATAG+TGG - Chr2:33269605-33269624 MsG0280008515.01.T01:intron 30.0%
TTGTTAAATAGCAGCTATAG+TGG - Chr2:33267041-33267060 MsG0280008515.01.T01:intron 30.0%
TTTAAGAAACCCAGGAATTA+GGG + Chr2:33265766-33265785 None:intergenic 30.0%
TTTCTCTGCAAAGACAATAA+CGG + Chr2:33271530-33271549 None:intergenic 30.0%
TTTGAGGGAGAAAAATATGA+TGG - Chr2:33270432-33270451 MsG0280008515.01.T01:intron 30.0%
! AAAATCACGAAGAGACTTTT+TGG + Chr2:33265471-33265490 None:intergenic 30.0%
! ATGTTTTTCTGTTTTCACTC+TGG - Chr2:33268798-33268817 MsG0280008515.01.T01:intron 30.0%
! CATCTCTCTTTTCTCTTAAA+AGG - Chr2:33267849-33267868 MsG0280008515.01.T01:CDS 30.0%
! CTCCTGGCTATAATTTTTAA+CGG + Chr2:33269801-33269820 None:intergenic 30.0%
! CTTTTTATGCAGATAGCAAT+AGG - Chr2:33267295-33267314 MsG0280008515.01.T01:intron 30.0%
! GATCAAACCATTTGCATTTT+AGG + Chr2:33271508-33271527 None:intergenic 30.0%
! GGTTTTTGATAGAAACACTA+TGG - Chr2:33271378-33271397 MsG0280008515.01.T01:intron 30.0%
! GTATTGGTATAGAAGTTAGA+AGG + Chr2:33269928-33269947 None:intergenic 30.0%
! GTCTTCTTTTCTTCTGTAAT+CGG - Chr2:33270172-33270191 MsG0280008515.01.T01:CDS 30.0%
! TGAAGTAAGTTTGTTTCACA+CGG - Chr2:33267924-33267943 MsG0280008515.01.T01:CDS 30.0%
! TTCTGCTCATATATCACTTT+TGG - Chr2:33269077-33269096 MsG0280008515.01.T01:CDS 30.0%
! TTTATAGATGAACTAGTCTC+AGG + Chr2:33267676-33267695 None:intergenic 30.0%
! TTTTAGATCCGACGTAAAAT+AGG + Chr2:33270682-33270701 None:intergenic 30.0%
! TTTTCACCCTTTATGATGAA+TGG - Chr2:33272375-33272394 MsG0280008515.01.T01:five_prime_UTR 30.0%
!! ACATATCGATTTCGTATCTT+AGG - Chr2:33265566-33265585 MsG0280008515.01.T01:three_prime_UTR 30.0%
!! AGAAACTTGAGTATTTTAGG+TGG - Chr2:33270933-33270952 MsG0280008515.01.T01:intron 30.0%
!! CAGCCTAGAATTTTACTTTT+AGG - Chr2:33271143-33271162 MsG0280008515.01.T01:intron 30.0%
!! CATATCGATTTCGTATCTTA+GGG - Chr2:33265567-33265586 MsG0280008515.01.T01:three_prime_UTR 30.0%
!! TAGTAATGATGGTGGAAAAT+AGG - Chr2:33268496-33268515 MsG0280008515.01.T01:intron 30.0%
!! TTTCTTCGTTTTGACCAAAT+GGG - Chr2:33265673-33265692 MsG0280008515.01.T01:three_prime_UTR 30.0%
!! TTTGGAATTTTGACACACTA+TGG - Chr2:33272639-33272658 MsG0280008515.01.T01:five_prime_UTR 30.0%
!! TTTTCTTCGTTTTGACCAAA+TGG - Chr2:33265672-33265691 MsG0280008515.01.T01:three_prime_UTR 30.0%
!!! AGTTGTTTTGGTGTTGATTT+TGG - Chr2:33265846-33265865 MsG0280008515.01.T01:intron 30.0%
!!! AGTTTATTTTGTTCATGGCT+AGG + Chr2:33269292-33269311 None:intergenic 30.0%
!!! ATTCTCGTTTTAGTTTCTTC+TGG - Chr2:33265702-33265721 MsG0280008515.01.T01:exon 30.0%
!!! ATTGGTTTTGACCAATCAAA+TGG - Chr2:33269479-33269498 MsG0280008515.01.T01:intron 30.0%
!!! CCTTTTTCAGGATATTTTGA+GGG - Chr2:33270417-33270436 MsG0280008515.01.T01:intron 30.0%
!!! GGTAATAGTAGAGTTTTTTG+AGG - Chr2:33265867-33265886 MsG0280008515.01.T01:intron 30.0%
!!! TCTTACATTTTGAGTTCTAC+TGG - Chr2:33271199-33271218 MsG0280008515.01.T01:intron 30.0%
!!! TTCTCGTTTTAGTTTCTTCT+GGG - Chr2:33265703-33265722 MsG0280008515.01.T01:exon 30.0%
AAACCTACCTTTACCAATTG+AGG + Chr2:33272582-33272601 None:intergenic 35.0%
AAATCGCAGAAAACTGCAAA+TGG - Chr2:33272467-33272486 MsG0280008515.01.T01:five_prime_UTR 35.0%
AACAAATCACTGTTGTTGTG+AGG - Chr2:33267159-33267178 MsG0280008515.01.T01:intron 35.0%
AACTGATAAAAGGTCCTGTT+TGG - Chr2:33272132-33272151 MsG0280008515.01.T01:CDS 35.0%
AAGCATCCAAAAAGCAGTAA+CGG + Chr2:33267972-33267991 None:intergenic 35.0%
AATTATCCACCAAACACTCA+CGG + Chr2:33266544-33266563 None:intergenic 35.0%
ACAAGTGTTCCTATCTGTAT+TGG + Chr2:33269944-33269963 None:intergenic 35.0%
ACACACTATGGTCACAAAAA+AGG - Chr2:33272651-33272670 MsG0280008515.01.T01:five_prime_UTR 35.0%
ACACTCCGTTCAATGATTTA+AGG + Chr2:33268338-33268357 None:intergenic 35.0%
ACTCACGGTATTAGGTAATT+TGG + Chr2:33266529-33266548 None:intergenic 35.0%
ATATGATTCTCCAAAAGCTG+AGG + Chr2:33269226-33269245 None:intergenic 35.0%
ATCAGCCTAAAAGTCTTCAA+TGG + Chr2:33269567-33269586 None:intergenic 35.0%
ATGACAACATTAGAGAGAGT+TGG - Chr2:33268457-33268476 MsG0280008515.01.T01:intron 35.0%
ATGTTGGGAATGGTATCAAT+TGG - Chr2:33270974-33270993 MsG0280008515.01.T01:intron 35.0%
ATTGGTAAAGGTAGGTTTGT+AGG - Chr2:33272584-33272603 MsG0280008515.01.T01:five_prime_UTR 35.0%
CACACTATGGTCACAAAAAA+GGG - Chr2:33272652-33272671 MsG0280008515.01.T01:five_prime_UTR 35.0%
CCAATTAAGCACAATGGTTT+AGG - Chr2:33270486-33270505 MsG0280008515.01.T01:CDS 35.0%
CCACTACCAATGAAAAAACA+TGG - Chr2:33270579-33270598 MsG0280008515.01.T01:CDS 35.0%
CCCTCAAAATATCCTGAAAA+AGG + Chr2:33270420-33270439 None:intergenic 35.0%
CCTAAACCATTGTGCTTAAT+TGG + Chr2:33270489-33270508 None:intergenic 35.0%
CCTTGCAAGTAAACAAAATC+CGG + Chr2:33266414-33266433 None:intergenic 35.0%
CGAGAATAAAATAAGCGTAG+TGG - Chr2:33268379-33268398 MsG0280008515.01.T01:intron 35.0%
CGTTAAAAATTATAGCCAGG+AGG - Chr2:33269799-33269818 MsG0280008515.01.T01:intron 35.0%
CTAATTCCTGGGTTTCTTAA+AGG - Chr2:33265765-33265784 MsG0280008515.01.T01:CDS 35.0%
CTTGTTCCAATTAAGCACAA+TGG - Chr2:33270480-33270499 MsG0280008515.01.T01:CDS 35.0%
CTTTAACATGAGCACTTATG+TGG + Chr2:33272197-33272216 None:intergenic 35.0%
GAAATTGCATAACATCCTTC+AGG + Chr2:33270746-33270765 None:intergenic 35.0%
GAAGGATGTTATGCAATTTC+TGG - Chr2:33270746-33270765 MsG0280008515.01.T01:intron 35.0%
GAAGTAATAAGAGAGAAGTG+TGG + Chr2:33267335-33267354 None:intergenic 35.0%
GACATGGATGGTATAATGTT+TGG - Chr2:33266581-33266600 MsG0280008515.01.T01:intron 35.0%
GAGTACCTTACACTATTTAC+TGG - Chr2:33266891-33266910 MsG0280008515.01.T01:intron 35.0%
GGAAGAAAATAATCCACACA+AGG + Chr2:33266508-33266527 None:intergenic 35.0%
GGGGATGTAAACTTCAAAAT+CGG - Chr2:33268836-33268855 MsG0280008515.01.T01:CDS 35.0%
GGTTTATTTGGAAACTCCTA+AGG - Chr2:33266633-33266652 MsG0280008515.01.T01:intron 35.0%
GTAAACTTCAAAATCGGACA+AGG - Chr2:33268842-33268861 MsG0280008515.01.T01:CDS 35.0%
GTAAGATTATCTAGGTAGAG+GGG + Chr2:33271185-33271204 None:intergenic 35.0%
GTATTAGTCATCTACCATCT+TGG - Chr2:33266979-33266998 MsG0280008515.01.T01:intron 35.0%
GTGCTCAGTAAAAAGTTAAG+AGG + Chr2:33269184-33269203 None:intergenic 35.0%
TAAAAGATGACTGAGCAAGT+TGG + Chr2:33267510-33267529 None:intergenic 35.0%
TAAATCATTGAACGGAGTGT+TGG - Chr2:33268338-33268357 MsG0280008515.01.T01:intron 35.0%
TACTTTGTCTAACATGAGTG+TGG + Chr2:33269847-33269866 None:intergenic 35.0%
TCTGCATAAAAAGAGATGCA+CGG + Chr2:33267288-33267307 None:intergenic 35.0%
TCTTCTGTGATTGTTTGACA+TGG - Chr2:33266565-33266584 MsG0280008515.01.T01:intron 35.0%
TGACAACATTAGAGAGAGTT+GGG - Chr2:33268458-33268477 MsG0280008515.01.T01:intron 35.0%
TGACACATAGAATGACAGTA+AGG - Chr2:33271034-33271053 MsG0280008515.01.T01:intron 35.0%
TGCAATCGCATAATAATGCA+AGG + Chr2:33271098-33271117 None:intergenic 35.0%
TGTACTAAATAGCATGTCTC+GGG + Chr2:33267105-33267124 None:intergenic 35.0%
TGTTGTTGACACAACATGAA+AGG + Chr2:33271891-33271910 None:intergenic 35.0%
TTAAAAGGATGCGTGCTTAT+TGG - Chr2:33267864-33267883 MsG0280008515.01.T01:CDS 35.0%
TTAACACTAGCCATGTACAT+TGG + Chr2:33272531-33272550 None:intergenic 35.0%
TTATTGGAGTCATTAGAGGA+TGG - Chr2:33267880-33267899 MsG0280008515.01.T01:CDS 35.0%
TTGTGCTTAATTGGAACAAG+AGG + Chr2:33270480-33270499 None:intergenic 35.0%
TTTATCCCAATAAGTGGGAT+TGG + Chr2:33268683-33268702 None:intergenic 35.0%
! AAAAGCATGACAATCCAAGA+TGG + Chr2:33266996-33267015 None:intergenic 35.0%
! AAAGGGCCATCAAAATTTTC+TGG - Chr2:33272669-33272688 MsG0280008515.01.T01:five_prime_UTR 35.0%
! AAATCATTGAACGGAGTGTT+GGG - Chr2:33268339-33268358 MsG0280008515.01.T01:intron 35.0%
! AGGTAAGACTTTTGTACATG+TGG - Chr2:33270871-33270890 MsG0280008515.01.T01:intron 35.0%
! CAAGCTTTATCCCAATAAGT+GGG + Chr2:33268688-33268707 None:intergenic 35.0%
! CTTAGCAAAACTTCGATTTG+GGG - Chr2:33265609-33265628 MsG0280008515.01.T01:three_prime_UTR 35.0%
! CTTTAAGAAACCCAGGAATT+AGG + Chr2:33265767-33265786 None:intergenic 35.0%
! GCAATGCCAGAAAATTTTGA+TGG + Chr2:33272678-33272697 None:intergenic 35.0%
! GCTTCTTGGTATTTGTTAAC+AGG - Chr2:33270041-33270060 MsG0280008515.01.T01:intron 35.0%
! GGAAACCATTGAAGACTTTT+AGG - Chr2:33269559-33269578 MsG0280008515.01.T01:intron 35.0%
! TAGCTGCTATTTAACAACAC+TGG + Chr2:33267038-33267057 None:intergenic 35.0%
! TCAAAATCGGACAAGGTATT+TGG - Chr2:33268849-33268868 MsG0280008515.01.T01:CDS 35.0%
! TCTTTTCTTCTGTAATCGGA+AGG - Chr2:33270176-33270195 MsG0280008515.01.T01:CDS 35.0%
! TTAGCTCATGATGATGTAGA+TGG - Chr2:33271769-33271788 MsG0280008515.01.T01:CDS 35.0%
! TTATGTGTTTCCTCAGCTTT+TGG - Chr2:33269213-33269232 MsG0280008515.01.T01:intron 35.0%
! TTGAAGATAATGGCAGTGAT+AGG - Chr2:33270334-33270353 MsG0280008515.01.T01:intron 35.0%
! TTTTTACTGTTGTAGGGTGT+TGG - Chr2:33271700-33271719 MsG0280008515.01.T01:CDS 35.0%
!! AAGACTTTTAGGCTGATTTC+TGG - Chr2:33269570-33269589 MsG0280008515.01.T01:intron 35.0%
!! CTGGACAAGTTGACTATTTT+CGG + Chr2:33269263-33269282 None:intergenic 35.0%
!! CTGGGTTGATTTGTAGTATT+GGG - Chr2:33265822-33265841 MsG0280008515.01.T01:intron 35.0%
!! GTAGTATTGGGAAGTTGTTT+TGG - Chr2:33265834-33265853 MsG0280008515.01.T01:intron 35.0%
!! GTATTTTAGGTGGTTTCAAG+AGG - Chr2:33270943-33270962 MsG0280008515.01.T01:intron 35.0%
!! GTTTATCCGTTACTGCTTTT+TGG - Chr2:33267963-33267982 MsG0280008515.01.T01:CDS 35.0%
!! TCTGGGTTGATTTGTAGTAT+TGG - Chr2:33265821-33265840 MsG0280008515.01.T01:intron 35.0%
!! TTAACTCTAGAGCATGATTC+TGG + Chr2:33270288-33270307 None:intergenic 35.0%
!! TTAGACGATAGTGGAGAAAT+CGG - Chr2:33266441-33266460 MsG0280008515.01.T01:CDS 35.0%
!! TTTGCTTTTCCCTAATTCCT+GGG - Chr2:33265754-33265773 MsG0280008515.01.T01:CDS 35.0%
!! TTTTGCTTTTCCCTAATTCC+TGG - Chr2:33265753-33265772 MsG0280008515.01.T01:CDS 35.0%
!! TTTTTCCCTTTAAGAAACCC+AGG + Chr2:33265774-33265793 None:intergenic 35.0%
!!! AGTAGAGTTTTTTGAGGCAT+TGG - Chr2:33265873-33265892 MsG0280008515.01.T01:intron 35.0%
!!! CATATATCACTTTTGGTGTC+CGG - Chr2:33269084-33269103 MsG0280008515.01.T01:CDS 35.0%
!!! CCATGTTTTTTCATTGGTAG+TGG + Chr2:33270582-33270601 None:intergenic 35.0%
!!! CCCTTTTTCAGGATATTTTG+AGG - Chr2:33270416-33270435 MsG0280008515.01.T01:intron 35.0%
!!! GTAGAGTTTTTTGAGGCATT+GGG - Chr2:33265874-33265893 MsG0280008515.01.T01:intron 35.0%
!!! TAGAGTTTTTTGAGGCATTG+GGG - Chr2:33265875-33265894 MsG0280008515.01.T01:intron 35.0%
!!! TCATCAAGCTTTTTTCTCAG+TGG - Chr2:33266949-33266968 MsG0280008515.01.T01:intron 35.0%
!!! TTAAACGGAGGTGTTTTGTT+TGG - Chr2:33266864-33266883 MsG0280008515.01.T01:intron 35.0%
!!! TTACTTTTAGGAAAAGCACC+AGG - Chr2:33271155-33271174 MsG0280008515.01.T01:intron 35.0%
!!! TTGTACTTTTTCTTCTGCTG+AGG - Chr2:33271258-33271277 MsG0280008515.01.T01:CDS 35.0%
!!! TTTTTGAAACCTAGACCAAC+TGG + Chr2:33269437-33269456 None:intergenic 35.0%
AAATTTGACATGCTGCAGTG+TGG + Chr2:33272440-33272459 None:intergenic 40.0%
AACCTAGATCGCGAAAATAG+CGG + Chr2:33269762-33269781 None:intergenic 40.0%
AACGAAGAAAGTTCCGGAAA+CGG + Chr2:33266093-33266112 None:intergenic 40.0%
AACTCCTAAGGGCGAAAAAT+TGG - Chr2:33266645-33266664 MsG0280008515.01.T01:intron 40.0%
AAGCATGGGCCAAAAATTCT+CGG - Chr2:33267586-33267605 MsG0280008515.01.T01:CDS 40.0%
AATAATCCACACAAGGCTTC+CGG + Chr2:33266501-33266520 None:intergenic 40.0%
AATAGGACTGAAGGTAGCAA+AGG + Chr2:33270665-33270684 None:intergenic 40.0%
ACAAAATCAGAAGCAGAAGC+AGG - Chr2:33266032-33266051 MsG0280008515.01.T01:intron 40.0%
ACTATACTGTGTGCAAAACG+AGG - Chr2:33267531-33267550 MsG0280008515.01.T01:intron 40.0%
AGACGCTTGTTTCAATGATC+AGG - Chr2:33269113-33269132 MsG0280008515.01.T01:CDS 40.0%
AGGATGTTACATTGGATGTG+TGG - Chr2:33268407-33268426 MsG0280008515.01.T01:intron 40.0%
AGTCCTGCCATTCATCATAA+AGG + Chr2:33272385-33272404 None:intergenic 40.0%
AGTGAAACCTGATCCCAATT+AGG + Chr2:33268246-33268265 None:intergenic 40.0%
ATACCTCACAACAGTCAGAA+GGG - Chr2:33267556-33267575 MsG0280008515.01.T01:intron 40.0%
ATGCATAGCAAGGCTAACAT+AGG + Chr2:33266176-33266195 None:intergenic 40.0%
ATGTAGCCAATCCCACTTAT+TGG - Chr2:33268674-33268693 MsG0280008515.01.T01:intron 40.0%
ATGTGTGGTAAGACTTAGAC+TGG - Chr2:33268422-33268441 MsG0280008515.01.T01:intron 40.0%
CAGACGTTTAGCATTCAGAA+CGG + Chr2:33270829-33270848 None:intergenic 40.0%
CCACTTATTGGGATAAAGCT+TGG - Chr2:33268686-33268705 MsG0280008515.01.T01:intron 40.0%
CGAAAATAGTCAACTTGTCC+AGG - Chr2:33269261-33269280 MsG0280008515.01.T01:intron 40.0%
CTGTGATTGTTTGACATGGA+TGG - Chr2:33266569-33266588 MsG0280008515.01.T01:intron 40.0%
CTTGTTTCAATGATCAGGCA+CGG - Chr2:33269118-33269137 MsG0280008515.01.T01:CDS 40.0%
GACAACATTAGAGAGAGTTG+GGG - Chr2:33268459-33268478 MsG0280008515.01.T01:intron 40.0%
GAGAAATTAAGCCACGAAGT+TGG - Chr2:33271544-33271563 MsG0280008515.01.T01:CDS 40.0%
GATCCTCAATTGGTAAAGGT+AGG - Chr2:33272576-33272595 MsG0280008515.01.T01:five_prime_UTR 40.0%
GCTTGATCCTCAATTGGTAA+AGG - Chr2:33272572-33272591 MsG0280008515.01.T01:five_prime_UTR 40.0%
GGCATGTAGATTCTGTAGTA+AGG - Chr2:33268543-33268562 MsG0280008515.01.T01:intron 40.0%
GGCGTGAAAGTTGAAGATAA+TGG - Chr2:33270324-33270343 MsG0280008515.01.T01:CDS 40.0%
GGCTCTCAAAACCATTTGAT+TGG + Chr2:33269493-33269512 None:intergenic 40.0%
GGGAATGGTATCAATTGGAA+AGG - Chr2:33270979-33270998 MsG0280008515.01.T01:intron 40.0%
GTACTAAATAGCATGTCTCG+GGG + Chr2:33267104-33267123 None:intergenic 40.0%
GTATTGTAAAACGAGGATCG+CGG + Chr2:33267256-33267275 None:intergenic 40.0%
GTCCTGCCATTCATCATAAA+GGG + Chr2:33272384-33272403 None:intergenic 40.0%
GTGCTTATTGGAGTCATTAG+AGG - Chr2:33267876-33267895 MsG0280008515.01.T01:CDS 40.0%
GTGGAAAATAGGCTTAGGTT+GGG - Chr2:33268507-33268526 MsG0280008515.01.T01:intron 40.0%
GTTTGTTCCTAATTGGGATC+AGG - Chr2:33268236-33268255 MsG0280008515.01.T01:intron 40.0%
TACCTAATACCGTGAGTGTT+TGG - Chr2:33266532-33266551 MsG0280008515.01.T01:intron 40.0%
TAGTACATCCAGCCATACAT+GGG - Chr2:33267477-33267496 MsG0280008515.01.T01:intron 40.0%
TGCGATTGCATTAGCTGAAA+CGG - Chr2:33271108-33271127 MsG0280008515.01.T01:intron 40.0%
TGGAGATGAGGATGTTACAT+TGG - Chr2:33268399-33268418 MsG0280008515.01.T01:intron 40.0%
TGGTAAGACTTAGACTGGAT+AGG - Chr2:33268427-33268446 MsG0280008515.01.T01:intron 40.0%
TGTAGCCAATCCCACTTATT+GGG - Chr2:33268675-33268694 MsG0280008515.01.T01:intron 40.0%
TGTGTCTGAGTATGTGTGTA+AGG - Chr2:33271832-33271851 MsG0280008515.01.T01:CDS 40.0%
TTCAAACACACTAGATCCAC+AGG + Chr2:33269350-33269369 None:intergenic 40.0%
TTCTCATGCCATGGATTCAT+TGG + Chr2:33267366-33267385 None:intergenic 40.0%
TTCTGTGCTTGATCCTCAAT+TGG - Chr2:33272566-33272585 MsG0280008515.01.T01:five_prime_UTR 40.0%
TTGTATGCGTGTTCCTACAT+GGG - Chr2:33269372-33269391 MsG0280008515.01.T01:intron 40.0%
TTGTTTCAATGATCAGGCAC+GGG - Chr2:33269119-33269138 MsG0280008515.01.T01:CDS 40.0%
TTTCCGGAACTTTCTTCGTT+CGG - Chr2:33266093-33266112 MsG0280008515.01.T01:intron 40.0%
TTTCCTAGAGCCAATGTACA+TGG - Chr2:33272518-33272537 MsG0280008515.01.T01:five_prime_UTR 40.0%
TTTGTATGCGTGTTCCTACA+TGG - Chr2:33269371-33269390 MsG0280008515.01.T01:intron 40.0%
! AAATAAGCGTAGTGGAGATG+AGG - Chr2:33268387-33268406 MsG0280008515.01.T01:intron 40.0%
! AAATCGGACAAGGTATTTGG+TGG - Chr2:33268852-33268871 MsG0280008515.01.T01:CDS 40.0%
! AACAGTAGAGGTTTTGCAGT+TGG - Chr2:33265901-33265920 MsG0280008515.01.T01:intron 40.0%
! AATGCTGCTTATTGTGTCAC+AGG - Chr2:33271794-33271813 MsG0280008515.01.T01:CDS 40.0%
! ACAGTAGAGGTTTTGCAGTT+GGG - Chr2:33265902-33265921 MsG0280008515.01.T01:intron 40.0%
! CAAAAGCTTCTCCCTTTTTC+AGG - Chr2:33270405-33270424 MsG0280008515.01.T01:intron 40.0%
! CCAAGCTTTATCCCAATAAG+TGG + Chr2:33268689-33268708 None:intergenic 40.0%
! CCTTCAGTCCTATTTTACGT+CGG - Chr2:33270671-33270690 MsG0280008515.01.T01:CDS 40.0%
! CTGAAAAAGGGAGAAGCTTT+TGG + Chr2:33270407-33270426 None:intergenic 40.0%
! GAAAAATATGATGGAGACCG+TGG - Chr2:33270441-33270460 MsG0280008515.01.T01:intron 40.0%
! GCTAAACTAGGGTGTTATCT+AGG - Chr2:33266784-33266803 MsG0280008515.01.T01:intron 40.0%
! GTATACTAGAGAGTGTGAGA+TGG - Chr2:33272337-33272356 MsG0280008515.01.T01:five_prime_UTR 40.0%
! GTATGTGCTGAAAAGTGCAA+TGG - Chr2:33268307-33268326 MsG0280008515.01.T01:intron 40.0%
! TCGTTTTACAATACCGTTCC+CGG - Chr2:33267262-33267281 MsG0280008515.01.T01:intron 40.0%
! TCTAGAGCATGATTCTGGTT+CGG + Chr2:33270283-33270302 None:intergenic 40.0%
! TTTTCTCTAGCCATCCTAGT+TGG - Chr2:33270226-33270245 MsG0280008515.01.T01:intron 40.0%
!! AATCATTGAACGGAGTGTTG+GGG - Chr2:33268340-33268359 MsG0280008515.01.T01:intron 40.0%
!! AGTCTTCTTGCTGTTCTTAG+TGG - Chr2:33265991-33266010 MsG0280008515.01.T01:intron 40.0%
!! ATGCAATTTCTGGTTCTTCG+AGG - Chr2:33270756-33270775 MsG0280008515.01.T01:intron 40.0%
!! CCGGATTTTGTTTACTTGCA+AGG - Chr2:33266411-33266430 MsG0280008515.01.T01:CDS 40.0%
!! TAGACGATAGTGGAGAAATC+GGG - Chr2:33266442-33266461 MsG0280008515.01.T01:CDS 40.0%
!! TGATGGTGGAAAATAGGCTT+AGG - Chr2:33268502-33268521 MsG0280008515.01.T01:intron 40.0%
!! TGCAATTTCTGGTTCTTCGA+GGG - Chr2:33270757-33270776 MsG0280008515.01.T01:intron 40.0%
!! TTAGCCTTGCTATGCATTAC+CGG - Chr2:33266179-33266198 MsG0280008515.01.T01:intron 40.0%
!! TTTTAGGTGGTTTCAAGAGG+AGG - Chr2:33270946-33270965 MsG0280008515.01.T01:intron 40.0%
!!! CTCATTTTGGTTGTGATAGG+CGG - Chr2:33271959-33271978 MsG0280008515.01.T01:intron 40.0%
!!! CTCTGGCTTTTCTACAGATA+CGG - Chr2:33268815-33268834 MsG0280008515.01.T01:CDS 40.0%
!!! GAGGCTGATTTGATTTTCCA+CGG + Chr2:33270461-33270480 None:intergenic 40.0%
!!! TCGCAGCCATGTTTTTTCAT+TGG + Chr2:33270588-33270607 None:intergenic 40.0%
!!! TCTGGCTTTTCTACAGATAC+GGG - Chr2:33268816-33268835 MsG0280008515.01.T01:CDS 40.0%
ACACTTAGCGGGATAAGACT+TGG - Chr2:33266225-33266244 MsG0280008515.01.T01:CDS 45.0%
ACCTCTGAGCAAACTCGTAT+TGG + Chr2:33270618-33270637 None:intergenic 45.0%
ACGAAGAAAGTTCCGGAAAC+GGG + Chr2:33266092-33266111 None:intergenic 45.0%
ACGAGAATCAGTGACCCATT+TGG + Chr2:33265690-33265709 None:intergenic 45.0%
ACTCAGACACAGAGACAGAA+CGG + Chr2:33271823-33271842 None:intergenic 45.0%
AGAAATCGGGTCTCTTGTGT+GGG - Chr2:33266455-33266474 MsG0280008515.01.T01:CDS 45.0%
AGCATGGGCCAAAAATTCTC+GGG - Chr2:33267587-33267606 MsG0280008515.01.T01:CDS 45.0%
AGGACTACGCGAAAACTGAT+GGG - Chr2:33272399-33272418 MsG0280008515.01.T01:five_prime_UTR 45.0%
AGTGGTAGGCTTGGATACTT+TGG - Chr2:33267750-33267769 MsG0280008515.01.T01:CDS 45.0%
ATAAAAAGAGATGCACGGCC+GGG + Chr2:33267283-33267302 None:intergenic 45.0%
ATAATCCACACAAGGCTTCC+GGG + Chr2:33266500-33266519 None:intergenic 45.0%
ATACCGCTGCCTAGTTATGT+TGG - Chr2:33270092-33270111 MsG0280008515.01.T01:intron 45.0%
ATAGCAAGGCTAACATAGGC+AGG + Chr2:33266172-33266191 None:intergenic 45.0%
CAAGAGGAGGCTTTCATGTT+GGG - Chr2:33270959-33270978 MsG0280008515.01.T01:intron 45.0%
CACCAAACACTCACGGTATT+AGG + Chr2:33266537-33266556 None:intergenic 45.0%
CACCCTTTATGATGAATGGC+AGG - Chr2:33272379-33272398 MsG0280008515.01.T01:five_prime_UTR 45.0%
CATAAAAAGAGATGCACGGC+CGG + Chr2:33267284-33267303 None:intergenic 45.0%
CATACCTCACAACAGTCAGA+AGG - Chr2:33267555-33267574 MsG0280008515.01.T01:intron 45.0%
CATGGACCAACCTCAATGTT+AGG + Chr2:33267619-33267638 None:intergenic 45.0%
CCGACGTAAAATAGGACTGA+AGG + Chr2:33270674-33270693 None:intergenic 45.0%
CGAGCAAGTTCATCGAAAGT+AGG + Chr2:33266372-33266391 None:intergenic 45.0%
CGTAGATATATCACAGCGCA+TGG + Chr2:33269052-33269071 None:intergenic 45.0%
CTAATACCGTGAGTGTTTGG+TGG - Chr2:33266535-33266554 MsG0280008515.01.T01:intron 45.0%
GAACCTCCTAACATTGAGGT+TGG - Chr2:33267610-33267629 MsG0280008515.01.T01:CDS 45.0%
GCTATTTAACAACACTGGCC+AGG + Chr2:33267033-33267052 None:intergenic 45.0%
GGATTCCACCAATGAATCCA+TGG - Chr2:33267355-33267374 MsG0280008515.01.T01:CDS 45.0%
GGGAACGGTATTGTAAAACG+AGG + Chr2:33267263-33267282 None:intergenic 45.0%
GGTGGAAAATAGGCTTAGGT+TGG - Chr2:33268506-33268525 MsG0280008515.01.T01:intron 45.0%
GTAGTACATCCAGCCATACA+TGG - Chr2:33267476-33267495 MsG0280008515.01.T01:intron 45.0%
GTCTTGACACACCCTGAAAA+TGG + Chr2:33265966-33265985 None:intergenic 45.0%
TAAGGGCGAAAAATTGGCAG+AGG - Chr2:33266651-33266670 MsG0280008515.01.T01:intron 45.0%
TACCGCTGCCTAGTTATGTT+GGG - Chr2:33270093-33270112 MsG0280008515.01.T01:intron 45.0%
TAGCAACGCCCAACATAACT+AGG + Chr2:33270104-33270123 None:intergenic 45.0%
TAGCATTCAGAACGGCATCA+GGG + Chr2:33270821-33270840 None:intergenic 45.0%
TATCAAACGACGCCACTAAG+TGG + Chr2:33271429-33271448 None:intergenic 45.0%
TCAAGAGGAGGCTTTCATGT+TGG - Chr2:33270958-33270977 MsG0280008515.01.T01:intron 45.0%
TCATGCCATGGATTCATTGG+TGG + Chr2:33267363-33267382 None:intergenic 45.0%
TTAACCTGTGAAGCCCATGT+AGG + Chr2:33269388-33269407 None:intergenic 45.0%
TTAGCATTCAGAACGGCATC+AGG + Chr2:33270822-33270841 None:intergenic 45.0%
TTCAAAGCGCAACAGTGCTA+TGG + Chr2:33267219-33267238 None:intergenic 45.0%
TTCCGGAACTTTCTTCGTTC+GGG - Chr2:33266094-33266113 MsG0280008515.01.T01:intron 45.0%
! AATACGAGTTTGCTCAGAGG+TGG - Chr2:33270617-33270636 MsG0280008515.01.T01:CDS 45.0%
! ATTTTCGTCGTACCCGTTTC+CGG - Chr2:33266077-33266096 MsG0280008515.01.T01:intron 45.0%
! CGTTCTGAATGCTAAACGTC+TGG - Chr2:33270827-33270846 MsG0280008515.01.T01:intron 45.0%
! TCCAATACGAGTTTGCTCAG+AGG - Chr2:33270614-33270633 MsG0280008515.01.T01:CDS 45.0%
! TCTGCCAATTTTTCGCCCTT+AGG + Chr2:33266652-33266671 None:intergenic 45.0%
! TTGGGCGTTGCTAGTATTCA+AGG - Chr2:33270111-33270130 MsG0280008515.01.T01:intron 45.0%
!! AACCGCTATTTTCGCGATCT+AGG - Chr2:33269757-33269776 MsG0280008515.01.T01:intron 45.0%
!! AGTTCTAGAACAACTGCAGC+CGG - Chr2:33266392-33266411 MsG0280008515.01.T01:intron 45.0%
!! ATCATTGAACGGAGTGTTGG+GGG - Chr2:33268341-33268360 MsG0280008515.01.T01:intron 45.0%
!! CTGGCTTTTCTACAGATACG+GGG - Chr2:33268817-33268836 MsG0280008515.01.T01:CDS 45.0%
!! GTTGGAAAGCATCCCATGTA+TGG + Chr2:33267492-33267511 None:intergenic 45.0%
!! TAGCCATGTACATTGGCTCT+AGG + Chr2:33272524-33272543 None:intergenic 45.0%
!! TTGTTTTTCCCTGTTGCGAC+AGG - Chr2:33270713-33270732 MsG0280008515.01.T01:intron 45.0%
!!! CTTTTTTCTCAGTGGCACAG+AGG - Chr2:33266957-33266976 MsG0280008515.01.T01:intron 45.0%
!!! GATCTTTTTCGACTAGGTGC+TGG + Chr2:33270261-33270280 None:intergenic 45.0%
!!! GGGCTCATTTTGGTTGTGAT+AGG - Chr2:33271956-33271975 MsG0280008515.01.T01:intron 45.0%
!!! GGTTCGGATCTTTTTCGACT+AGG + Chr2:33270267-33270286 None:intergenic 45.0%
!!! GTTTTGAGAGCCTCACATTG+TGG - Chr2:33269501-33269520 MsG0280008515.01.T01:intron 45.0%
ACTGTGGTATGTGTGGTGAG+TGG - Chr2:33271935-33271954 MsG0280008515.01.T01:intron 50.0%
AGATCAGCTTCAGTAGCCTG+TGG - Chr2:33269331-33269350 MsG0280008515.01.T01:intron 50.0%
AGGTTGGGCATGTAGAGAGA+AGG - Chr2:33268522-33268541 MsG0280008515.01.T01:intron 50.0%
CAGGACTACGCGAAAACTGA+TGG - Chr2:33272398-33272417 MsG0280008515.01.T01:five_prime_UTR 50.0%
CATACTCGCCTCATTCCACA+AGG - Chr2:33270780-33270799 MsG0280008515.01.T01:intron 50.0%
CTGTGGTATGTGTGGTGAGT+GGG - Chr2:33271936-33271955 MsG0280008515.01.T01:intron 50.0%
GAAACAAGCGTCTGCACTAC+CGG + Chr2:33269106-33269125 None:intergenic 50.0%
GAATTCCTCCTGTCGCAACA+GGG + Chr2:33270724-33270743 None:intergenic 50.0%
GAGAAATCGGGTCTCTTGTG+TGG - Chr2:33266454-33266473 MsG0280008515.01.T01:CDS 50.0%
GATCTTCGAGGCTCGTATGA+AGG + Chr2:33269316-33269335 None:intergenic 50.0%
GCATGGGCCAAAAATTCTCG+GGG - Chr2:33267588-33267607 MsG0280008515.01.T01:CDS 50.0%
GCATTGGGGTGAAACAGTAG+AGG - Chr2:33265889-33265908 MsG0280008515.01.T01:intron 50.0%
GCTACTGAAGCTGATCTTCG+AGG + Chr2:33269328-33269347 None:intergenic 50.0%
GCTGTAGTGCTATAGCACAG+AGG - Chr2:33269629-33269648 MsG0280008515.01.T01:intron 50.0%
GGACCAACCTCAATGTTAGG+AGG + Chr2:33267616-33267635 None:intergenic 50.0%
GGAGGCTTTCATGTTGGGAA+TGG - Chr2:33270964-33270983 MsG0280008515.01.T01:intron 50.0%
GGTCAGCAGTTAGACGATAG+TGG - Chr2:33266432-33266451 MsG0280008515.01.T01:CDS 50.0%
GTTCATGGCTAGGAATTGCC+TGG + Chr2:33269282-33269301 None:intergenic 50.0%
TAAGTGTGTGCTCGGCTACA+TGG + Chr2:33266212-33266231 None:intergenic 50.0%
TAATCCACACAAGGCTTCCG+GGG + Chr2:33266499-33266518 None:intergenic 50.0%
TATCCCGCTAAGTGTGTGCT+CGG + Chr2:33266220-33266239 None:intergenic 50.0%
TCCATGTGAAGCAGACACGA+AGG - Chr2:33267633-33267652 MsG0280008515.01.T01:CDS 50.0%
TCCTTCGTGTCTGCTTCACA+TGG + Chr2:33267637-33267656 None:intergenic 50.0%
TCGCTACACTTCTCATGCCA+TGG + Chr2:33267375-33267394 None:intergenic 50.0%
TGAAGCAGACACGAAGGAAG+AGG - Chr2:33267639-33267658 MsG0280008515.01.T01:CDS 50.0%
TGCGTGAGAATGTTGCTGCT+TGG + Chr2:33269020-33269039 None:intergenic 50.0%
TGGGTGAACTGTGGTATGTG+TGG - Chr2:33271928-33271947 MsG0280008515.01.T01:intron 50.0%
TGTTCCTACATGGGCTTCAC+AGG - Chr2:33269381-33269400 MsG0280008515.01.T01:intron 50.0%
TTGTGGATTTCCCTGCACAG+TGG - Chr2:33267732-33267751 MsG0280008515.01.T01:CDS 50.0%
TTTGGTTGTGATAGGCGGCA+AGG - Chr2:33271964-33271983 MsG0280008515.01.T01:intron 50.0%
! AATGTTGCTGCTTGGAGAGG+AGG + Chr2:33269012-33269031 None:intergenic 50.0%
! AGCTTTTGGCGATGAGACTG+AGG + Chr2:33270393-33270412 None:intergenic 50.0%
! ATGTAGCCGACTCCACTTAG+TGG - Chr2:33271414-33271433 MsG0280008515.01.T01:intron 50.0%
! GAGAATGTTGCTGCTTGGAG+AGG + Chr2:33269015-33269034 None:intergenic 50.0%
! GAGGCATCAACCAACTAGGA+TGG + Chr2:33270239-33270258 None:intergenic 50.0%
! GCAAGGACTCGGAGCATTTA+AGG - Chr2:33271981-33272000 MsG0280008515.01.T01:intron 50.0%
! GCAGGATGATGATGCTTCTG+AGG - Chr2:33266050-33266069 MsG0280008515.01.T01:intron 50.0%
! GCTTTTGGCGATGAGACTGA+GGG + Chr2:33270392-33270411 None:intergenic 50.0%
! GGAGGTTCCCCGAGAATTTT+TGG + Chr2:33267598-33267617 None:intergenic 50.0%
! GGTTTTGCAGTTGGGAGAAG+TGG - Chr2:33265910-33265929 MsG0280008515.01.T01:intron 50.0%
! TTTTTCCCTGTTGCGACAGG+AGG - Chr2:33270716-33270735 MsG0280008515.01.T01:intron 50.0%
!! ATTGACTCGGCCACAATGTG+AGG + Chr2:33269514-33269533 None:intergenic 50.0%
!! CGATTTTGACCTGTCTACCC+CGG - Chr2:33266479-33266498 MsG0280008515.01.T01:CDS 50.0%
!! GAAAGCATCCCATGTATGGC+TGG + Chr2:33267488-33267507 None:intergenic 50.0%
!! GGCAGAGGCACTACATTCTA+AGG - Chr2:33266666-33266685 MsG0280008515.01.T01:intron 50.0%
!! TCATTGAACGGAGTGTTGGG+GGG - Chr2:33268342-33268361 MsG0280008515.01.T01:intron 50.0%
!! TGTGGTGAGTGGGCTCATTT+TGG - Chr2:33271946-33271965 MsG0280008515.01.T01:intron 50.0%
!!! ACGGAGGTGTTTTGTTTGGC+AGG - Chr2:33266868-33266887 MsG0280008515.01.T01:intron 50.0%
!!! CGGAGGTGTTTTGTTTGGCA+GGG - Chr2:33266869-33266888 MsG0280008515.01.T01:intron 50.0%
!!! CTTTTTCGACTAGGTGCTGG+AGG + Chr2:33270258-33270277 None:intergenic 50.0%
AACTCAGCAAGGCCACCTTG+TGG + Chr2:33270798-33270817 None:intergenic 55.0%
ACGACGCCACTAAGTGGAGT+CGG + Chr2:33271423-33271442 None:intergenic 55.0%
ACTCGCCTCATTCCACAAGG+TGG - Chr2:33270783-33270802 MsG0280008515.01.T01:intron 55.0%
AGAAGGGCAGCGGTAAGCAT+GGG - Chr2:33267572-33267591 MsG0280008515.01.T01:intron 55.0%
AGCAACATTCTCACGCAGCG+TGG - Chr2:33269023-33269042 MsG0280008515.01.T01:intron 55.0%
AGGCAGCGGTATGACACGTT+CGG + Chr2:33270084-33270103 None:intergenic 55.0%
ATCCAAGCCTACCACTGTGC+AGG + Chr2:33267746-33267765 None:intergenic 55.0%
CAAGGCCACCTTGTGGAATG+AGG + Chr2:33270791-33270810 None:intergenic 55.0%
CACAACAGTCAGAAGGGCAG+CGG - Chr2:33267562-33267581 MsG0280008515.01.T01:intron 55.0%
CGCCCAACATAACTAGGCAG+CGG + Chr2:33270098-33270117 None:intergenic 55.0%
CGCCCGAACGAAGAAAGTTC+CGG + Chr2:33266099-33266118 None:intergenic 55.0%
CGGGGAACCTCCTAACATTG+AGG - Chr2:33267606-33267625 MsG0280008515.01.T01:CDS 55.0%
CTGCCCTTCTGACTGTTGTG+AGG + Chr2:33267562-33267581 None:intergenic 55.0%
GCGACAGGAGGAATTCCTGA+AGG - Chr2:33270728-33270747 MsG0280008515.01.T01:intron 55.0%
GGAATTCCTCCTGTCGCAAC+AGG + Chr2:33270725-33270744 None:intergenic 55.0%
GGATTTCCCTGCACAGTGGT+AGG - Chr2:33267736-33267755 MsG0280008515.01.T01:CDS 55.0%
GGGACCGGTAATGCATAGCA+AGG + Chr2:33266186-33266205 None:intergenic 55.0%
GTAGCCGAGCACACACTTAG+CGG - Chr2:33266213-33266232 MsG0280008515.01.T01:intron 55.0%
GTCAACAACAGTAGCGCAGC+AGG - Chr2:33271901-33271920 MsG0280008515.01.T01:intron 55.0%
TAGCCGAGCACACACTTAGC+GGG - Chr2:33266214-33266233 MsG0280008515.01.T01:CDS 55.0%
TCCAAGCCTACCACTGTGCA+GGG + Chr2:33267745-33267764 None:intergenic 55.0%
TCTAGGTAGAGGGGAATGCC+TGG + Chr2:33271176-33271195 None:intergenic 55.0%
TGGCGATGAGACTGAGGGAT+TGG + Chr2:33270387-33270406 None:intergenic 55.0%
TGTGATAGGCGGCAAGGACT+CGG - Chr2:33271970-33271989 MsG0280008515.01.T01:intron 55.0%
TGTGCTCGGCTACATGGCTT+GGG + Chr2:33266206-33266225 None:intergenic 55.0%
TTCTTCGTTCGGGCGACTTG+AGG - Chr2:33266104-33266123 MsG0280008515.01.T01:intron 55.0%
! CTACGCGAAAACTGATGGGC+TGG - Chr2:33272403-33272422 MsG0280008515.01.T01:five_prime_UTR 55.0%
! TTTGAAGTGTCTGCGCCTCC+TGG + Chr2:33269817-33269836 None:intergenic 55.0%
!! CATTGAACGGAGTGTTGGGG+GGG - Chr2:33268343-33268362 MsG0280008515.01.T01:intron 55.0%
!! GCTGGAGGCATCAACCAACT+AGG + Chr2:33270243-33270262 None:intergenic 55.0%
AAGAGATGCACGGCCGGGAA+CGG + Chr2:33267278-33267297 None:intergenic 60.0%
ACAAGGCTTCCGGGGTAGAC+AGG + Chr2:33266491-33266510 None:intergenic 60.0%
ACAGTAGCGCAGCAGGTGAC+TGG - Chr2:33271908-33271927 MsG0280008515.01.T01:intron 60.0%
CAGAAGGGCAGCGGTAAGCA+TGG - Chr2:33267571-33267590 MsG0280008515.01.T01:intron 60.0%
CAGTAGCGCAGCAGGTGACT+GGG - Chr2:33271909-33271928 MsG0280008515.01.T01:intron 60.0%
CGGCATCAGGGAACTCAGCA+AGG + Chr2:33270809-33270828 None:intergenic 60.0%
GCAGGTGACTGGGTGAACTG+TGG - Chr2:33271919-33271938 MsG0280008515.01.T01:intron 60.0%
GTGTGCTCGGCTACATGGCT+TGG + Chr2:33266207-33266226 None:intergenic 60.0%
TCCCTGCACAGTGGTAGGCT+TGG - Chr2:33267741-33267760 MsG0280008515.01.T01:CDS 60.0%
! GTTGCTGCTTGGAGAGGAGG+TGG + Chr2:33269009-33269028 None:intergenic 60.0%
! TCGGCTACATGGCTTGGGAC+CGG + Chr2:33266201-33266220 None:intergenic 60.0%
! TCTACCCCGGAAGCCTTGTG+TGG - Chr2:33266492-33266511 MsG0280008515.01.T01:intron 60.0%
GCTGCTTGGAGAGGAGGTGG+TGG + Chr2:33269006-33269025 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 33265435 33272781 33265435 ID=MsG0280008515.01;Name=MsG0280008515.01
Chr2 mRNA 33265435 33272781 33265435 ID=MsG0280008515.01.T01;Parent=MsG0280008515.01;Name=MsG0280008515.01.T01;_AED=0.30;_eAED=0.32;_QI=520|0.56|0.70|1|1|1|17|285|802
Chr2 exon 33265435 33265815 33265435 ID=MsG0280008515.01.T01:exon:6230;Parent=MsG0280008515.01.T01
Chr2 exon 33266214 33266304 33266214 ID=MsG0280008515.01.T01:exon:6229;Parent=MsG0280008515.01.T01
Chr2 exon 33266401 33266501 33266401 ID=MsG0280008515.01.T01:exon:6228;Parent=MsG0280008515.01.T01
Chr2 exon 33267166 33267264 33267166 ID=MsG0280008515.01.T01:exon:6227;Parent=MsG0280008515.01.T01
Chr2 exon 33267344 33267481 33267344 ID=MsG0280008515.01.T01:exon:6226;Parent=MsG0280008515.01.T01
Chr2 exon 33267581 33268153 33267581 ID=MsG0280008515.01.T01:exon:6225;Parent=MsG0280008515.01.T01
Chr2 exon 33268814 33268987 33268814 ID=MsG0280008515.01.T01:exon:6224;Parent=MsG0280008515.01.T01
Chr2 exon 33269076 33269217 33269076 ID=MsG0280008515.01.T01:exon:6223;Parent=MsG0280008515.01.T01
Chr2 exon 33269353 33269384 33269353 ID=MsG0280008515.01.T01:exon:6222;Parent=MsG0280008515.01.T01
Chr2 exon 33269888 33269958 33269888 ID=MsG0280008515.01.T01:exon:6221;Parent=MsG0280008515.01.T01
Chr2 exon 33270161 33270206 33270161 ID=MsG0280008515.01.T01:exon:6220;Parent=MsG0280008515.01.T01
Chr2 exon 33270289 33270345 33270289 ID=MsG0280008515.01.T01:exon:6219;Parent=MsG0280008515.01.T01
Chr2 exon 33270445 33270727 33270445 ID=MsG0280008515.01.T01:exon:6218;Parent=MsG0280008515.01.T01
Chr2 exon 33271238 33271326 33271238 ID=MsG0280008515.01.T01:exon:6217;Parent=MsG0280008515.01.T01
Chr2 exon 33271529 33271582 33271529 ID=MsG0280008515.01.T01:exon:6216;Parent=MsG0280008515.01.T01
Chr2 exon 33271674 33271865 33271674 ID=MsG0280008515.01.T01:exon:6215;Parent=MsG0280008515.01.T01
Chr2 exon 33272091 33272781 33272091 ID=MsG0280008515.01.T01:exon:6214;Parent=MsG0280008515.01.T01
Chr2 five_prime_UTR 33272262 33272781 33272262 ID=MsG0280008515.01.T01:five_prime_utr;Parent=MsG0280008515.01.T01
Chr2 CDS 33272091 33272261 33272091 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33271674 33271865 33271674 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33271529 33271582 33271529 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33271238 33271326 33271238 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33270445 33270727 33270445 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33270289 33270345 33270289 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33270161 33270206 33270161 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33269888 33269958 33269888 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33269353 33269384 33269353 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33269076 33269217 33269076 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33268814 33268987 33268814 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33267581 33268153 33267581 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33267344 33267481 33267344 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33267166 33267264 33267166 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33266401 33266501 33266401 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33266214 33266304 33266214 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 CDS 33265720 33265815 33265720 ID=MsG0280008515.01.T01:cds;Parent=MsG0280008515.01.T01
Chr2 three_prime_UTR 33265435 33265719 33265435 ID=MsG0280008515.01.T01:three_prime_utr;Parent=MsG0280008515.01.T01
Gene Sequence

>MsG0280008515.01.T01

ATGATGTTCCATTTTCAGGGTGTGTCAAGACATTGTAGTCTTCTTGCTGTTCTTAGTGGTAAATCACATGATAGTAAACAAAATCAGAAGCAGAAGCAGGATGATGATGCTTCTGAGGATCAATTTTCGTCGTACCCGTTTCCGGAACTTTCTTCGTTCGGGCGACTTGAGGTTAAAGTGTTGACTAAACCTACTTTCGATGAACTTGCTCGAGTTCTAGAACAACTGCAGCCGGATTTTGTTTACTTGCAAGGTCAGCAGTTAGACGATAGTGGAGAAATCGGGTCTCTTGTGTGGGACGATTTTGACCTGTCTACCCCGGAAGCCTTGTGTGGATTATTTTCTTCCAAATTACCTAATACCGTTTATTTGGAAACTCCTAAGGGCGAAAAATTGGCAGAGGCACTACATTCTAAGGGAGTACCTTACACTATTTACTGGAAAAATGAATTTTCAAAGTATGCAGCTTCACATTTTCATCAAGCTTTTTTCTCAGTGGCACAGAGCCATACATGGGATGCTTTCCAACTTGCTCAGTCATCTTTTAGACTATACTGTGTGCAAAACGAGGTCATACCTCACAACAGTCAGAAGGGCAGCGGTAAGCATGGGCCAAAAATTCTCGGGGAACCTCCTAACATTGAGGTTGGTCCATGTGAAGCAGACACGAAGGAAGAGGAAGAAGATTCACCTGAGACTAGTTCATCTATAAAGATATATGATGATGATGTGAATACGAGATTTCTTCTTTGTGGATTTCCCTGCACAGTGGTAGGCTTGGATACTTTGGATGCGTGCTTATTGGAGTCATTAGAGGATGGACTCAATGCTCTCTTATGTTCTGAAATAACTTCATATGCATGGCGTTACACAATTGTAGTAATTGTTATAGGTTTCACTATTAACAAACCTAAAGAAGCTATGATACAAAATCAAGATGTGTATGTGCTGAAAAGTGCAATGATACGGGGATGTAAACTTCAAAATCGGACAAGTGCTCCACCACCTCCTCTCCAAGCAGCAACATTCTCACGCAGCGTGGTGACCATGCGCTGTGATATATCTACGTCTAGTTCTGCTCATATATCACTTTTGGTGTCCGGTAGTGCAGACGCTTGTTTCAATGATCAGGCACGGCTTTTGGAGAATCATATTAAGAAAGAGCTCACCGAAAATAGTCAACTTGTCCAGGCAATTCCTAGCCATGAACAAAATAAACTACCTTCATACGAGCCTCGAAGATCAGCTTCAGTAGCCTGTGGATCTAGTGTGTTTGAAGTTTGTATGCGTGTTCCTACATGGGCTTCACAGGTTCTTAGACAACTTGCACCGAACGTGTCATACCGCTGCCTAGTTATGTTGGGCGTTGCTAGTATTCAAGGATTATCAGTTGCATCTTTTACTAAAGATGATGCAGAATGTCTTCTTTTCTTCTGTAATCGGAAGGAGAAAGATAACTGCTCCAAAGATATTGTTTTCTCTAGCCATCCTAGTTGGTTGATGCCTCCAGCACCTAGTCGAAAAAGATCCGAACCAGAATCATGCTCTAGAGTTAAATCTATCAATGCTAGTGGCGTGAAAGTTGAAGATAATGGCAGTGATAGGCAGAAATTAAGTTTAGCTGCAATGAGGCCAATCCCTCAGTCTCATCGCCAAAAGCTTCTCCCTTTTTCAGGATATTTTGAGGGAGAAAAATATGATGGAGACCGTGGAAAATCAAATCAGCCTCTTGTTCCAATTAAGCACAATGGTTTAGGTTCTCGTTCAGTTACAAACAGAAAATCTGTGTCAAACTCGTTTCAAGCTCACCAGATAATATCTTTGAATCCACTACCAATGAAAAAACATGGCTGCGACAGAGCTCCAATACGAGTTTGCTCAGAGGAGGAATTCCTGAAGGATGTTATGCAATTTCTGGTTCTTCGAGGGCATACTCGCCTCATTCCACAAGGTGGCCTTGCTGAGTTCCCTGATGCCGTTCTGAATGCTAAACGTCTGGATCTTTTTAACTTGTATAGAGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGGAATGGTATCAATTGGAAAGGACAAGTTTTCTCAAAGATGAGCAATCACACTCTGACACATAGAATGACAGGTGTTGGCAATACACTCAAAAGACATTACGAAACTTATCTTTTAGAATATGAATTAGCTCATGATGATGTAGATGGCGAATGCTGCTTATTGTGTCACAGTAGCGCAGCAGGTGACTGGGTGAACTGTGGTATGTGTGGTGAGTGGGCTCATTTTGGTTGTGATAGGCGGCAAGGACTCGGAGCATTTAAGGACTACGCGAAAACTGATGGGCTGGAATACGTTTGTCCACACTGCAGCATGTCAAATTTCAGTAAAAAATCGCAGAAAACTGCAAATGGTTATTAA

Protein sequence

>MsG0280008515.01.T01

MMFHFQGVSRHCSLLAVLSGKSHDSKQNQKQKQDDDASEDQFSSYPFPELSSFGRLEVKVLTKPTFDELARVLEQLQPDFVYLQGQQLDDSGEIGSLVWDDFDLSTPEALCGLFSSKLPNTVYLETPKGEKLAEALHSKGVPYTIYWKNEFSKYAASHFHQAFFSVAQSHTWDAFQLAQSSFRLYCVQNEVIPHNSQKGSGKHGPKILGEPPNIEVGPCEADTKEEEEDSPETSSSIKIYDDDVNTRFLLCGFPCTVVGLDTLDACLLESLEDGLNALLCSEITSYAWRYTIVVIVIGFTINKPKEAMIQNQDVYVLKSAMIRGCKLQNRTSAPPPPLQAATFSRSVVTMRCDISTSSSAHISLLVSGSADACFNDQARLLENHIKKELTENSQLVQAIPSHEQNKLPSYEPRRSASVACGSSVFEVCMRVPTWASQVLRQLAPNVSYRCLVMLGVASIQGLSVASFTKDDAECLLFFCNRKEKDNCSKDIVFSSHPSWLMPPAPSRKRSEPESCSRVKSINASGVKVEDNGSDRQKLSLAAMRPIPQSHRQKLLPFSGYFEGEKYDGDRGKSNQPLVPIKHNGLGSRSVTNRKSVSNSFQAHQIISLNPLPMKKHGCDRAPIRVCSEEEFLKDVMQFLVLRGHTRLIPQGGLAEFPDAVLNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMSNHTLTHRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGMCGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPHCSMSNFSKKSQKTANGY*