Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719970 | XP_003617053.2 | 80.428 | 608 | 25 | 5 | 1 | 514 | 765 | 1372 | 0.0 | 937 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719970 | sp|Q7G192|ALDO2_ARATH | 57.190 | 605 | 167 | 6 | 1 | 513 | 714 | 1318 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719970 | G7KHG0 | 80.428 | 608 | 25 | 5 | 1 | 514 | 765 | 1372 | 0.0 | 937 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0719970 | 0.815622 | 8.412735e-52 | -8.615850e-47 |
| Msa0012470 | Msa0719970 | 0.814692 | 1.353516e-51 | -8.615850e-47 |
| Msa0050770 | Msa0719970 | 0.802455 | 5.564483e-49 | -8.615850e-47 |
| Msa0055280 | Msa0719970 | 0.806322 | 8.700713e-50 | -8.615850e-47 |
| Msa0056550 | Msa0719970 | 0.801696 | 7.971280e-49 | -8.615850e-47 |
| Msa0077390 | Msa0719970 | 0.833475 | 5.219989e-56 | -8.615850e-47 |
| Msa0101060 | Msa0719970 | 0.802637 | 5.103825e-49 | -8.615850e-47 |
| Msa0605230 | Msa0719970 | 0.818799 | 1.623116e-52 | -8.615850e-47 |
| Msa0620640 | Msa0719970 | 0.817093 | 3.942874e-52 | -8.615850e-47 |
| Msa0626230 | Msa0719970 | 0.821900 | 3.157264e-53 | -8.615850e-47 |
| Msa0639030 | Msa0719970 | 0.820872 | 5.450896e-53 | -8.615850e-47 |
| Msa0640380 | Msa0719970 | 0.820777 | 5.734564e-53 | -8.615850e-47 |
| Msa0641020 | Msa0719970 | 0.816655 | 4.944754e-52 | -8.615850e-47 |
| Msa0646390 | Msa0719970 | 0.834653 | 2.646274e-56 | -8.615850e-47 |
| Msa0672810 | Msa0719970 | 0.807616 | 4.633505e-50 | -8.615850e-47 |
| Msa0672850 | Msa0719970 | 0.831117 | 2.002296e-55 | -8.615850e-47 |
| Msa0678820 | Msa0719970 | 0.820454 | 6.801146e-53 | -8.615850e-47 |
| Msa0685880 | Msa0719970 | 0.823212 | 1.563875e-53 | -8.615850e-47 |
| Msa0697140 | Msa0719970 | 0.821300 | 4.345539e-53 | -8.615850e-47 |
| Msa0697200 | Msa0719970 | 0.805371 | 1.378861e-49 | -8.615850e-47 |
| Msa0697600 | Msa0719970 | 0.813394 | 2.616863e-51 | -8.615850e-47 |
| Msa0719970 | Msa0722930 | 0.833740 | 4.482655e-56 | -8.615850e-47 |
| Msa0719970 | Msa0723140 | 0.827157 | 1.826845e-54 | -8.615850e-47 |
| Msa0719970 | Msa0724050 | 0.805026 | 1.628429e-49 | -8.615850e-47 |
| Msa0719970 | Msa0726610 | 0.815686 | 8.142625e-52 | -8.615850e-47 |
| Msa0719970 | Msa0750380 | 0.827960 | 1.171779e-54 | -8.615850e-47 |
| Msa0719970 | Msa0752580 | 0.824714 | 6.950389e-54 | -8.615850e-47 |
| Msa0719970 | Msa0754500 | 0.816790 | 4.610898e-52 | -8.615850e-47 |
| Msa0719970 | Msa0763880 | 0.803953 | 2.725859e-49 | -8.615850e-47 |
| Msa0719970 | Msa0769800 | 0.803517 | 3.357216e-49 | -8.615850e-47 |
| Msa0719970 | Msa0775580 | 0.833572 | 4.938361e-56 | -8.615850e-47 |
| Msa0719970 | Msa0780140 | 0.803285 | 3.749519e-49 | -8.615850e-47 |
| Msa0719970 | Msa0788360 | 0.821941 | 3.089578e-53 | -8.615850e-47 |
| Msa0719970 | Msa0792510 | 0.835921 | 1.266218e-56 | -8.615850e-47 |
| Msa0719970 | Msa0794460 | 0.842890 | 1.961210e-58 | -8.615850e-47 |
| Msa0719970 | Msa0806210 | 0.811420 | 7.065007e-51 | -8.615850e-47 |
| Msa0719970 | Msa0820350 | 0.909376 | 6.101645e-82 | -8.615850e-47 |
| Msa0719970 | Msa0826650 | 0.817634 | 2.979370e-52 | -8.615850e-47 |
| Msa0719970 | Msa0830720 | 0.837907 | 3.939021e-57 | -8.615850e-47 |
| Msa0719970 | Msa0843280 | 0.857336 | 1.749701e-62 | -8.615850e-47 |
| Msa0719970 | Msa0847200 | 0.811859 | 5.669332e-51 | -8.615850e-47 |
| Msa0719970 | Msa0853500 | 0.803285 | 3.750209e-49 | -8.615850e-47 |
| Msa0719970 | Msa0860760 | 0.849118 | 3.969511e-60 | -8.615850e-47 |
| Msa0719970 | Msa0861480 | 0.801055 | 1.078654e-48 | -8.615850e-47 |
| Msa0719970 | Msa0861560 | 0.819255 | 1.278376e-52 | -8.615850e-47 |
| Msa0719970 | Msa0863250 | 0.807071 | 6.044672e-50 | -8.615850e-47 |
| Msa0719970 | Msa0864690 | 0.817573 | 3.074570e-52 | -8.615850e-47 |
| Msa0719970 | Msa0883350 | 0.804943 | 1.694539e-49 | -8.615850e-47 |
| Msa0719970 | Msa0883390 | 0.813369 | 2.651076e-51 | -8.615850e-47 |
| Msa0719970 | Msa0883410 | 0.802918 | 4.465993e-49 | -8.615850e-47 |
| Msa0719970 | Msa0886660 | 0.803172 | 3.957243e-49 | -8.615850e-47 |
| Msa0719970 | Msa0887000 | 0.814953 | 1.184848e-51 | -8.615850e-47 |
| Msa0719970 | Msa0951720 | 0.823861 | 1.102666e-53 | -8.615850e-47 |
| Msa0719970 | Msa0964680 | 0.821559 | 3.784978e-53 | -8.615850e-47 |
| Msa0719970 | Msa1036360 | 0.842051 | 3.273829e-58 | -8.615850e-47 |
| Msa0719970 | Msa1036390 | 0.833929 | 4.021212e-56 | -8.615850e-47 |
| Msa0719970 | Msa1071310 | 0.805723 | 1.162895e-49 | -8.615850e-47 |
| Msa0719970 | Msa1076630 | 0.820685 | 6.020499e-53 | -8.615850e-47 |
| Msa0719970 | Msa1076640 | 0.841454 | 4.705517e-58 | -8.615850e-47 |
| Msa0719970 | Msa1076680 | 0.849513 | 3.082123e-60 | -8.615850e-47 |
| Msa0719970 | Msa1078740 | 0.802057 | 6.720852e-49 | -8.615850e-47 |
| Msa0719970 | Msa1082390 | 0.803859 | 2.850167e-49 | -8.615850e-47 |
| Msa0719970 | Msa1113210 | 0.813722 | 2.216263e-51 | -8.615850e-47 |
| Msa0719970 | Msa1113280 | 0.802749 | 4.840657e-49 | -8.615850e-47 |
| Msa0719970 | Msa1130350 | 0.806743 | 7.091360e-50 | -8.615850e-47 |
| Msa0719970 | Msa1130650 | 0.823899 | 1.080470e-53 | -8.615850e-47 |
| Msa0719970 | Msa1138450 | 0.825691 | 4.082638e-54 | -8.615850e-47 |
| Msa0719970 | Msa1161760 | 0.801037 | 1.087644e-48 | -8.615850e-47 |
| Msa0719970 | Msa1166170 | 0.823517 | 1.327334e-53 | -8.615850e-47 |
| Msa0719970 | Msa1166270 | 0.819037 | 1.433009e-52 | -8.615850e-47 |
| Msa0719970 | Msa1182780 | 0.806719 | 7.174340e-50 | -8.615850e-47 |
| Msa0719970 | Msa1182830 | 0.820056 | 8.388964e-53 | -8.615850e-47 |
| Msa0719970 | Msa1191390 | 0.815562 | 8.675355e-52 | -8.615850e-47 |
| Msa0719970 | Msa1206020 | 0.802076 | 6.659393e-49 | -8.615850e-47 |
| Msa0719970 | Msa1211390 | 0.806205 | 9.208240e-50 | -8.615850e-47 |
| Msa0719970 | Msa1221200 | -0.818905 | 1.535730e-52 | -8.615850e-47 |
| Msa0719970 | Msa1237260 | 0.804066 | 2.582422e-49 | -8.615850e-47 |
| Msa0719970 | Msa1249940 | 0.805831 | 1.104201e-49 | -8.615850e-47 |
| Msa0719970 | Msa1255520 | 0.810309 | 1.228858e-50 | -8.615850e-47 |
| Msa0719970 | Msa1272130 | 0.802800 | 4.723280e-49 | -8.615850e-47 |
| Msa0719970 | Msa1287160 | 0.801710 | 7.920341e-49 | -8.615850e-47 |
| Msa0719970 | Msa1287340 | 0.806046 | 9.950576e-50 | -8.615850e-47 |
| Msa0719970 | Msa1292730 | 0.824540 | 7.638354e-54 | -8.615850e-47 |
| Msa0719970 | Msa1343340 | 0.821424 | 4.067911e-53 | -8.615850e-47 |
| Msa0719970 | Msa1348240 | 0.806383 | 8.446628e-50 | -8.615850e-47 |
| Msa0719970 | Msa1358870 | -0.800533 | 1.378213e-48 | -8.615850e-47 |
| Msa0719970 | Msa1371840 | 0.803351 | 3.634293e-49 | -8.615850e-47 |
| Msa0719970 | Msa1373950 | 0.834415 | 3.037094e-56 | -8.615850e-47 |
| Msa0719970 | Msa1379090 | 0.801067 | 1.072218e-48 | -8.615850e-47 |
| Msa0719970 | Msa1397540 | 0.819570 | 1.083666e-52 | -8.615850e-47 |
| Msa0719970 | Msa1405400 | 0.814051 | 1.875732e-51 | -8.615850e-47 |
| Msa0719970 | Msa1410180 | 0.821366 | 4.195130e-53 | -8.615850e-47 |
| Msa0719970 | Msa1424510 | 0.801340 | 9.429016e-49 | -8.615850e-47 |
| Msa0719970 | Msa1441200 | 0.806264 | 8.952154e-50 | -8.615850e-47 |
| Msa0719970 | Msa1445250 | 0.805841 | 1.098826e-49 | -8.615850e-47 |
| Msa0719970 | Msa1460310 | -0.817712 | 2.860054e-52 | -8.615850e-47 |
| Msa0153430 | Msa0719970 | 0.809218 | 2.109468e-50 | -8.615850e-47 |
| Msa0153440 | Msa0719970 | 0.838107 | 3.500090e-57 | -8.615850e-47 |
| Msa0162070 | Msa0719970 | 0.807759 | 4.320326e-50 | -8.615850e-47 |
| Msa0179860 | Msa0719970 | 0.803267 | 3.782158e-49 | -8.615850e-47 |
| Msa0198440 | Msa0719970 | 0.835898 | 1.283628e-56 | -8.615850e-47 |
| Msa0232860 | Msa0719970 | 0.808475 | 3.041198e-50 | -8.615850e-47 |
| Msa0378670 | Msa0719970 | 0.801469 | 8.873086e-49 | -8.615850e-47 |
| Msa0389050 | Msa0719970 | 0.819773 | 9.739322e-53 | -8.615850e-47 |
| Msa0411000 | Msa0719970 | 0.837115 | 6.288800e-57 | -8.615850e-47 |
| Msa0419620 | Msa0719970 | -0.808147 | 3.573173e-50 | -8.615850e-47 |
| Msa0429170 | Msa0719970 | 0.806119 | 9.602765e-50 | -8.615850e-47 |
| Msa0431520 | Msa0719970 | 0.804283 | 2.326936e-49 | -8.615850e-47 |
| Msa0454940 | Msa0719970 | 0.800076 | 1.707575e-48 | -8.615850e-47 |
| Msa0455230 | Msa0719970 | 0.841314 | 5.123763e-58 | -8.615850e-47 |
| Msa0479030 | Msa0719970 | 0.804201 | 2.420442e-49 | -8.615850e-47 |
| Msa0240780 | Msa0719970 | 0.813478 | 2.508257e-51 | -8.615850e-47 |
| Msa0243470 | Msa0719970 | 0.800686 | 1.282805e-48 | -8.615850e-47 |
| Msa0264940 | Msa0719970 | -0.812787 | 3.557018e-51 | -8.615850e-47 |
| Msa0265820 | Msa0719970 | 0.808050 | 3.747357e-50 | -8.615850e-47 |
| Msa0270610 | Msa0719970 | 0.810310 | 1.228089e-50 | -8.615850e-47 |
| Msa0278670 | Msa0719970 | 0.833560 | 4.971871e-56 | -8.615850e-47 |
| Msa0281940 | Msa0719970 | 0.814563 | 1.445547e-51 | -8.615850e-47 |
| Msa0284870 | Msa0719970 | 0.804490 | 2.107264e-49 | -8.615850e-47 |
| Msa0301300 | Msa0719970 | 0.808322 | 3.279040e-50 | -8.615850e-47 |
| Msa0302990 | Msa0719970 | -0.817237 | 3.658766e-52 | -8.615850e-47 |
| Msa0318070 | Msa0719970 | 0.820469 | 6.746807e-53 | -8.615850e-47 |
| Msa0327860 | Msa0719970 | 0.800052 | 1.727294e-48 | -8.615850e-47 |
| Msa0362430 | Msa0719970 | 0.800081 | 1.703552e-48 | -8.615850e-47 |
| Msa0363460 | Msa0719970 | 0.834889 | 2.307840e-56 | -8.615850e-47 |
| Msa0502910 | Msa0719970 | 0.808543 | 2.941261e-50 | -8.615850e-47 |
| Msa0514000 | Msa0719970 | 0.807299 | 5.410794e-50 | -8.615850e-47 |
| Msa0528970 | Msa0719970 | 0.826706 | 2.341719e-54 | -8.615850e-47 |
| Msa0543900 | Msa0719970 | 0.828101 | 1.083752e-54 | -8.615850e-47 |
| Msa0549740 | Msa0719970 | 0.855912 | 4.588686e-62 | -8.615850e-47 |
| Msa0563140 | Msa0719970 | 0.821980 | 3.025833e-53 | -8.615850e-47 |
| Msa0577230 | Msa0719970 | 0.836928 | 7.019534e-57 | -8.615850e-47 |
| Msa0589610 | Msa0719970 | 0.801048 | 1.082063e-48 | -8.615850e-47 |
| Msa0599770 | Msa0719970 | 0.812113 | 4.992540e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719970 | MtrunA17_Chr5g0440261 | 80.428 | 608 | 25 | 5 | 1 | 514 | 765 | 1372 | 0.0 | 937 |
| Msa0719970 | MtrunA17_Chr5g0440251 | 68.317 | 606 | 96 | 7 | 1 | 511 | 765 | 1369 | 0.0 | 814 |
| Msa0719970 | MtrunA17_Chr2g0328851 | 29.223 | 592 | 297 | 16 | 7 | 490 | 756 | 1333 | 1.16e-56 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719970 | AT3G43600.1 | 57.190 | 605 | 167 | 6 | 1 | 513 | 714 | 1318 | 0.0 | 681 |
| Msa0719970 | AT2G27150.3 | 56.436 | 606 | 168 | 6 | 1 | 511 | 609 | 1213 | 0.0 | 681 |
| Msa0719970 | AT2G27150.6 | 56.436 | 606 | 168 | 6 | 1 | 511 | 609 | 1213 | 0.0 | 681 |
| Msa0719970 | AT2G27150.1 | 56.436 | 606 | 168 | 6 | 1 | 511 | 725 | 1329 | 0.0 | 681 |
| Msa0719970 | AT2G27150.2 | 56.436 | 606 | 168 | 6 | 1 | 511 | 725 | 1329 | 0.0 | 681 |
| Msa0719970 | AT1G04580.1 | 55.263 | 608 | 174 | 6 | 1 | 510 | 727 | 1334 | 0.0 | 672 |
| Msa0719970 | AT5G20960.1 | 55.410 | 610 | 175 | 7 | 1 | 514 | 757 | 1365 | 0.0 | 653 |
| Msa0719970 | AT5G20960.2 | 55.410 | 610 | 175 | 7 | 1 | 514 | 757 | 1365 | 0.0 | 653 |
| Msa0719970 | AT2G27150.5 | 55.629 | 453 | 136 | 5 | 1 | 391 | 609 | 1058 | 3.38e-167 | 501 |
| Msa0719970 | AT2G27150.4 | 55.629 | 453 | 136 | 5 | 1 | 391 | 725 | 1174 | 6.84e-166 | 501 |
| Msa0719970 | AT4G34890.1 | 28.305 | 590 | 305 | 12 | 7 | 490 | 757 | 1334 | 3.94e-56 | 203 |
| Msa0719970 | AT4G34900.2 | 28.765 | 591 | 301 | 13 | 7 | 490 | 665 | 1242 | 5.92e-54 | 197 |
| Msa0719970 | AT4G34900.1 | 28.765 | 591 | 301 | 13 | 7 | 490 | 749 | 1326 | 7.68e-54 | 196 |
| Msa0719970 | AT4G34900.3 | 27.981 | 411 | 246 | 8 | 7 | 376 | 749 | 1150 | 6.98e-38 | 149 |
Find 146 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAACTTGTTCCATATTAA+AGG | 0.170436 | 5_1:+15659121 | None:intergenic |
| AACATACAGTGTCGGATTTA+AGG | 0.224137 | 5_1:-15659491 | Msa0719970:CDS |
| CCATGATAGGAGCTGTTTCC+TGG | 0.234783 | 5_1:+15656757 | None:intergenic |
| AGAAGGGTTGGAGGAGGATT+TGG | 0.240960 | 5_1:-15659850 | Msa0719970:CDS |
| AAGATACTTGGAATGGAAAA+TGG | 0.243884 | 5_1:-15656639 | Msa0719970:CDS |
| AATATACCATGCCTTTAATA+TGG | 0.251942 | 5_1:-15659132 | Msa0719970:CDS |
| TGCCTTACACCTTGAGATAT+TGG | 0.277247 | 5_1:-15659452 | Msa0719970:CDS |
| TAATGGAACTGAAAGTCTTT+TGG | 0.310177 | 5_1:-15658852 | Msa0719970:CDS |
| ATCTCAATACTATTTCTATA+TGG | 0.316951 | 5_1:-15660010 | Msa0719970:CDS |
| TCTTGGAGCTTCTTCTTGAT+AGG | 0.335527 | 5_1:+15658698 | None:intergenic |
| TTTACTACAGGCATGGTTGC+AGG | 0.338663 | 5_1:+15656689 | None:intergenic |
| TACTCAGAAACTTGCAGATA+TGG | 0.346961 | 5_1:-15660351 | Msa0719970:five_prime_UTR |
| GGAGCTTTCATACAGGGGTT+AGG | 0.349353 | 5_1:-15657652 | Msa0719970:CDS |
| ACACTGTATGTTATCTTCAT+TGG | 0.359016 | 5_1:+15659502 | None:intergenic |
| TCCGTTAAGTACATCAATTA+TGG | 0.359698 | 5_1:-15658335 | Msa0719970:CDS |
| TATAAAACTTGGGCAAGAAT+TGG | 0.360131 | 5_1:-15660774 | Msa0719970:five_prime_UTR |
| TGAAACAAACCTTGATGGTT+TGG | 0.369420 | 5_1:-15657608 | Msa0719970:CDS |
| AGCGCACCAGCTATGTTGTT+TGG | 0.371177 | 5_1:+15659391 | None:intergenic |
| GCAATCTCTTCGGCAAATAA+AGG | 0.375692 | 5_1:+15660662 | None:intergenic |
| TGATAGAACTTGTTTGCTCT+TGG | 0.382875 | 5_1:+15658681 | None:intergenic |
| CGGGAATGTCTTTACTTGTA+AGG | 0.388052 | 5_1:+15660729 | None:intergenic |
| AATTATTGAGTGTCACAAAT+AGG | 0.388588 | 5_1:+15656485 | None:intergenic |
| GAGTATGAAACAAACCTTGA+TGG | 0.394038 | 5_1:-15657613 | Msa0719970:CDS |
| CATCTAAGTTGCTCCATGAT+AGG | 0.401591 | 5_1:+15656744 | None:intergenic |
| GCCATAATTGATGTACTTAA+CGG | 0.404462 | 5_1:+15658334 | None:intergenic |
| GGCATTATTGCGCTAACATC+GGG | 0.408095 | 5_1:+15659412 | None:intergenic |
| TCGAAAGACAGATATGATAA+TGG | 0.412341 | 5_1:-15659539 | Msa0719970:CDS |
| AGGGTTGGAGGAGGATTTGG+AGG | 0.422900 | 5_1:-15659847 | Msa0719970:CDS |
| CAAATGACTGCGTTCGCGCT+TGG | 0.424368 | 5_1:-15658887 | Msa0719970:CDS |
| AATTGCATCTTGCAGATTGA+AGG | 0.424514 | 5_1:-15657673 | Msa0719970:intron |
| TCAGATTCAGCATTTCAGTT+GGG | 0.426549 | 5_1:-15656716 | Msa0719970:CDS |
| GAGCTTTCATACAGGGGTTA+GGG | 0.432222 | 5_1:-15657651 | Msa0719970:CDS |
| CAAATTGGTGATGTATCAAA+AGG | 0.449614 | 5_1:-15660205 | Msa0719970:five_prime_UTR |
| AGAGTAATTACAAGAAGGGT+TGG | 0.459243 | 5_1:-15659862 | Msa0719970:CDS |
| GTAATTACAAGAAGGGTTGG+AGG | 0.460905 | 5_1:-15659859 | Msa0719970:CDS |
| ATACTTGTTATCTTTGCCAA+TGG | 0.461906 | 5_1:+15660794 | None:intergenic |
| AAGCAAGTTGTGCAGCAGTT+AGG | 0.464928 | 5_1:-15658754 | Msa0719970:CDS |
| TTCTTTGACAGCTGATCTTG+TGG | 0.466308 | 5_1:+15656781 | None:intergenic |
| CTTAACATTTGGAAGAAAAG+AGG | 0.468836 | 5_1:-15659046 | Msa0719970:intron |
| CAACAGCAGCTTCAACACTT+AGG | 0.472257 | 5_1:+15660276 | None:intergenic |
| AGTTATGCAATTGTCTTCAT+CGG | 0.474873 | 5_1:+15659963 | None:intergenic |
| CCCCTCACTGCAGATCTACT+AGG | 0.475150 | 5_1:+15659310 | None:intergenic |
| TATAGTAGAATGTGCATACT+CGG | 0.475558 | 5_1:+15659918 | None:intergenic |
| GGAGGAGGATTTGGAGGAAA+GGG | 0.475669 | 5_1:-15659841 | Msa0719970:CDS |
| GTTATGCAATTGTCTTCATC+GGG | 0.476854 | 5_1:+15659964 | None:intergenic |
| AGTGTCGGATTTAAGGATAA+TGG | 0.477311 | 5_1:-15659484 | Msa0719970:CDS |
| TGCAACCATGCCTGTAGTAA+AGG | 0.479131 | 5_1:-15656687 | Msa0719970:CDS |
| TGGAGATCGTCTTGCATTTG+TGG | 0.479928 | 5_1:-15660630 | Msa0719970:intron |
| TGTTAGAGTAATTACAAGAA+GGG | 0.480546 | 5_1:-15659866 | Msa0719970:CDS |
| GATTGAAGGAGCTTTCATAC+AGG | 0.481294 | 5_1:-15657659 | Msa0719970:CDS |
| CCAATGACTTCCTTTACTAC+AGG | 0.483740 | 5_1:+15656677 | None:intergenic |
| CTTGGAGCAAAGAGTAGATT+CGG | 0.485914 | 5_1:-15660692 | Msa0719970:five_prime_UTR |
| CCAAGGTTCTCCCCACCATC+GGG | 0.491891 | 5_1:+15660710 | None:intergenic |
| TCCTAGTAGATCTGCAGTGA+GGG | 0.493092 | 5_1:-15659311 | Msa0719970:CDS |
| CCAGGAAACAGCTCCTATCA+TGG | 0.494053 | 5_1:-15656757 | Msa0719970:CDS |
| GAGGAATAGTGTCTATTGTT+GGG | 0.496222 | 5_1:+15657554 | None:intergenic |
| TGAGGAATAGTGTCTATTGT+TGG | 0.496945 | 5_1:+15657553 | None:intergenic |
| CAGATTCAGCATTTCAGTTG+GGG | 0.497145 | 5_1:-15656715 | Msa0719970:CDS |
| CTTCATTGGATGTCTTCCTC+CGG | 0.500547 | 5_1:+15659516 | None:intergenic |
| TCACCAACAAATTGCCTACA+TGG | 0.501168 | 5_1:-15660839 | Msa0719970:five_prime_UTR |
| ATTACAAGAAGGGTTGGAGG+AGG | 0.501602 | 5_1:-15659856 | Msa0719970:CDS |
| TGCTTCTGATGTAGTGCTCC+CGG | 0.504638 | 5_1:+15658772 | None:intergenic |
| CGAATCTACTCTTTGCTCCA+AGG | 0.504711 | 5_1:+15660693 | None:intergenic |
| TTATTATGTGAATACAAGCT+TGG | 0.505472 | 5_1:-15656585 | Msa0719970:three_prime_UTR |
| GACCAATATCTCAAGGTGTA+AGG | 0.505776 | 5_1:+15659450 | None:intergenic |
| GAATTTCTTAAGACTTGTGT+AGG | 0.507795 | 5_1:+15659183 | None:intergenic |
| TCATGGAGCAACTTAGATGA+TGG | 0.508647 | 5_1:-15656740 | Msa0719970:CDS |
| CTTGGTACAATTCAGTGTAA+TGG | 0.508656 | 5_1:-15658869 | Msa0719970:CDS |
| CCTGTAGTAAAGGAAGTCAT+TGG | 0.508900 | 5_1:-15656677 | Msa0719970:CDS |
| AAGATAACAAGTATAAAACT+TGG | 0.509133 | 5_1:-15660785 | Msa0719970:five_prime_UTR |
| GATACCTTGAGTATGATTCA+AGG | 0.509496 | 5_1:-15658806 | Msa0719970:CDS |
| AATGAAACTCAGATAAAACT+TGG | 0.510179 | 5_1:-15660033 | Msa0719970:intron |
| GTTGGTGATGCTCACTGTTG+AGG | 0.512791 | 5_1:+15657512 | None:intergenic |
| TATTTATAGTGCAAAACCAT+TGG | 0.514867 | 5_1:-15660810 | Msa0719970:five_prime_UTR |
| TCCAAGGTTCTCCCCACCAT+CGG | 0.515891 | 5_1:+15660709 | None:intergenic |
| CACAGAGTTCTCTCCTCAAA+GGG | 0.517487 | 5_1:-15657490 | Msa0719970:intron |
| GACTTCCTTTACTACAGGCA+TGG | 0.521295 | 5_1:+15656682 | None:intergenic |
| ATCAGATTCAGCATTTCAGT+TGG | 0.524166 | 5_1:-15656717 | Msa0719970:CDS |
| TGTAGGCAATTTGTTGGTGA+TGG | 0.524596 | 5_1:+15660842 | None:intergenic |
| CTTGCAAAACCAAACCATCA+AGG | 0.524719 | 5_1:+15657599 | None:intergenic |
| AGCTACACTTTCGATGGAAG+TGG | 0.525447 | 5_1:-15659233 | Msa0719970:CDS |
| ATTTCAACATTGAACTGTTG+AGG | 0.525678 | 5_1:+15657535 | None:intergenic |
| TTACTACAGGCATGGTTGCA+GGG | 0.527766 | 5_1:+15656690 | None:intergenic |
| ATGTTAGAGTAATTACAAGA+AGG | 0.528061 | 5_1:-15659867 | Msa0719970:CDS |
| TGGAGGAGGATTTGGAGGAA+AGG | 0.530424 | 5_1:-15659842 | Msa0719970:CDS |
| ATAGTAGAATGTGCATACTC+GGG | 0.532417 | 5_1:+15659919 | None:intergenic |
| AACACATCTAGCAATCTCTT+CGG | 0.533493 | 5_1:+15660652 | None:intergenic |
| AGACATTGTACAAAGATACT+TGG | 0.533816 | 5_1:-15656651 | Msa0719970:CDS |
| ATAGAAAAGACTGTATTGAA+TGG | 0.534605 | 5_1:-15656457 | Msa0719970:three_prime_UTR |
| AATGATCCCTGCGTGTCACC+TGG | 0.536476 | 5_1:+15659286 | None:intergenic |
| GGAAAATGGACAACAAGTAA+AGG | 0.537387 | 5_1:-15656625 | Msa0719970:exon |
| CTTGTTCCATATTAAAGGCA+TGG | 0.538302 | 5_1:+15659126 | None:intergenic |
| GTACTTAACGGAATTACTAC+CGG | 0.539640 | 5_1:+15658346 | None:intergenic |
| ATACCTTGAGTATGATTCAA+GGG | 0.546156 | 5_1:-15658805 | Msa0719970:CDS |
| TGGCATTATTGCGCTAACAT+CGG | 0.547988 | 5_1:+15659411 | None:intergenic |
| TATAAATATATGCTCCATGT+AGG | 0.548342 | 5_1:+15660825 | None:intergenic |
| TTGAGATATTGGTCAACGCT+GGG | 0.548841 | 5_1:-15659441 | Msa0719970:CDS |
| GCTCCATGTAGGCAATTTGT+TGG | 0.550732 | 5_1:+15660836 | None:intergenic |
| TCTACTATAGCAAGATGCCT+TGG | 0.550881 | 5_1:-15659904 | Msa0719970:CDS |
| GTAAAGACATTCCCGATGGT+GGG | 0.554298 | 5_1:-15660721 | Msa0719970:five_prime_UTR |
| AACTGAAGCTGCTAGAAGCA+AGG | 0.554927 | 5_1:+15656811 | None:intergenic |
| TTCAACAACAACAGAACCAT+CGG | 0.560103 | 5_1:+15658955 | None:intergenic |
| ATAATGCCAAACAACATAGC+TGG | 0.561669 | 5_1:-15659397 | Msa0719970:CDS |
| CCCGATGGTGGGGAGAACCT+TGG | 0.561991 | 5_1:-15660710 | Msa0719970:five_prime_UTR |
| AGTAAAGACATTCCCGATGG+TGG | 0.563406 | 5_1:-15660722 | Msa0719970:five_prime_UTR |
| ATTGAAGGAGCTTTCATACA+GGG | 0.565150 | 5_1:-15657658 | Msa0719970:CDS |
| AAATTCTATGATAATTCTTG+TGG | 0.568554 | 5_1:-15659166 | Msa0719970:CDS |
| TGTTGCAGCTACACTTTCGA+TGG | 0.570023 | 5_1:-15659239 | Msa0719970:CDS |
| ACACAGAGTTCTCTCCTCAA+AGG | 0.570443 | 5_1:-15657491 | Msa0719970:CDS |
| GATCAGCTGTCAAAGAAGCC+AGG | 0.571499 | 5_1:-15656775 | Msa0719970:CDS |
| GAAGAGATTGCTAGATGTGT+TGG | 0.572808 | 5_1:-15660650 | Msa0719970:five_prime_UTR |
| TTGTACAAAGATACTTGGAA+TGG | 0.573105 | 5_1:-15656646 | Msa0719970:CDS |
| AAGACAGATATGATAATGGC+CGG | 0.573521 | 5_1:-15659535 | Msa0719970:CDS |
| TAAAGACATTCCCGATGGTG+GGG | 0.581442 | 5_1:-15660720 | Msa0719970:five_prime_UTR |
| AAGAGGAATATCTCGAGTAC+CGG | 0.582902 | 5_1:-15659029 | Msa0719970:CDS |
| TTGAGGAGAGAACTCTGTGT+TGG | 0.585612 | 5_1:+15657494 | None:intergenic |
| GCTTCAACACTTAGGATAGG+TGG | 0.593751 | 5_1:+15660284 | None:intergenic |
| TCACAAGATTGTTTCTGCTG+AGG | 0.599599 | 5_1:-15660167 | Msa0719970:intron |
| CTTGAGATATTGGTCAACGC+TGG | 0.600176 | 5_1:-15659442 | Msa0719970:CDS |
| TACTTAACGGAATTACTACC+GGG | 0.602026 | 5_1:+15658347 | None:intergenic |
| ATTGGAACTTGATGCAGTGA+GGG | 0.602937 | 5_1:-15660756 | Msa0719970:five_prime_UTR |
| CTTAGTTTAAGACCAACTCC+AGG | 0.603061 | 5_1:-15658995 | Msa0719970:CDS |
| CAGGGATCATTCATCGCCGA+AGG | 0.604188 | 5_1:-15659274 | Msa0719970:CDS |
| AGATAACAAGTATAAAACTT+GGG | 0.615052 | 5_1:-15660784 | Msa0719970:five_prime_UTR |
| GCAGCTTCAACACTTAGGAT+AGG | 0.615611 | 5_1:+15660281 | None:intergenic |
| AAAGGCATGGTATATTCAAG+TGG | 0.616955 | 5_1:+15659139 | None:intergenic |
| AGATTCAGCATTTCAGTTGG+GGG | 0.618333 | 5_1:-15656714 | Msa0719970:CDS |
| CAGCGTTGACCAATATCTCA+AGG | 0.619845 | 5_1:+15659443 | None:intergenic |
| ACTGAAGCTGCTAGAAGCAA+GGG | 0.621006 | 5_1:+15656812 | None:intergenic |
| TACCTTGAGTATGATTCAAG+GGG | 0.621896 | 5_1:-15658804 | Msa0719970:CDS |
| TGGTGATGTATCAAAAGGAA+TGG | 0.624656 | 5_1:-15660200 | Msa0719970:exon |
| TTGAAGGAGCTTTCATACAG+GGG | 0.629840 | 5_1:-15657657 | Msa0719970:CDS |
| GAAGCTGCTAGAAGCAAGGG+TGG | 0.633414 | 5_1:+15656815 | None:intergenic |
| CCTAGTAGATCTGCAGTGAG+GGG | 0.636496 | 5_1:-15659310 | Msa0719970:CDS |
| TTATGGCGCTGCAGTTAGTG+AGG | 0.639556 | 5_1:-15658318 | Msa0719970:intron |
| TTCATCGGGTACAGCGAGCG+CGG | 0.646281 | 5_1:+15659978 | None:intergenic |
| CTAGTAGATCTGCAGTGAGG+GGG | 0.651811 | 5_1:-15659309 | Msa0719970:CDS |
| AATTGGAACTTGATGCAGTG+AGG | 0.651991 | 5_1:-15660757 | Msa0719970:five_prime_UTR |
| ATCCTAGTAGATCTGCAGTG+AGG | 0.657711 | 5_1:-15659312 | Msa0719970:CDS |
| ATGAAGATAACATACAGTGT+CGG | 0.668821 | 5_1:-15659499 | Msa0719970:CDS |
| AAACTAAGCTCATACAACAC+CGG | 0.672212 | 5_1:+15659010 | None:intergenic |
| TAGTAGAATGTGCATACTCG+GGG | 0.676761 | 5_1:+15659920 | None:intergenic |
| ACAAGTAAAGACATTCCCGA+TGG | 0.691237 | 5_1:-15660725 | Msa0719970:five_prime_UTR |
| ACAGATATGATAATGGCCGG+AGG | 0.700168 | 5_1:-15659532 | Msa0719970:CDS |
| ACCTTGAGTATGATTCAAGG+GGG | 0.715581 | 5_1:-15658803 | Msa0719970:CDS |
| AAGACTGTAATCAACAACAG+AGG | 0.724599 | 5_1:+15660319 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGTTTAATACTTAAATTT+TGG | + | chr5_1:15659824-15659843 | None:intergenic | 10.0% |
| !!! | TTATTTTAAAGTTACTATAA+TGG | + | chr5_1:15660338-15660357 | None:intergenic | 10.0% |
| !! | TATAGCATTATATGATAATT+TGG | + | chr5_1:15659041-15659060 | None:intergenic | 15.0% |
| !! | TATAATGCTATACTAAATAA+TGG | - | chr5_1:15659049-15659068 | Msa0719970:intron | 15.0% |
| !! | TATAGTTATGATATCAAATT+AGG | + | chr5_1:15659415-15659434 | None:intergenic | 15.0% |
| !!! | TTAAATTTTGGAAAAGTTTT+TGG | + | chr5_1:15659812-15659831 | None:intergenic | 15.0% |
| !! | AATAGAAAACAAAAATATGT+TGG | - | chr5_1:15660368-15660387 | Msa0719970:intron | 15.0% |
| !! | AAATTATAACTGATATTTGT+TGG | - | chr5_1:15660416-15660435 | Msa0719970:intron | 15.0% |
| !! | AAGATAACAAGTATAAAACT+TGG | - | chr5_1:15656486-15656505 | Msa0719970:three_prime_UTR | 20.0% |
| !! | AGATAACAAGTATAAAACTT+GGG | - | chr5_1:15656487-15656506 | Msa0719970:three_prime_UTR | 20.0% |
| !!! | ATCACCAATTTGATTTTTTT+GGG | + | chr5_1:15657058-15657077 | None:intergenic | 20.0% |
| !!! | ATCTCAATACTATTTCTATA+TGG | - | chr5_1:15657261-15657280 | Msa0719970:intron | 20.0% |
| !!! | ATTACTCTAACATTATTTTC+AGG | + | chr5_1:15657397-15657416 | None:intergenic | 20.0% |
| !! | AAAAACAACTAAAAACTTAC+AGG | + | chr5_1:15657469-15657488 | None:intergenic | 20.0% |
| !!! | AACATTTTCTATTATACCTT+CGG | + | chr5_1:15658016-15658035 | None:intergenic | 20.0% |
| !! | AAATTCTATGATAATTCTTG+TGG | - | chr5_1:15658105-15658124 | Msa0719970:intron | 20.0% |
| !! | AGTTTAATAGACTTAACATT+TGG | - | chr5_1:15658214-15658233 | Msa0719970:intron | 20.0% |
| !!! | CTAATTTGATAGAATTTTTG+TGG | + | chr5_1:15659954-15659973 | None:intergenic | 20.0% |
| !! | CACAAAAATTCTATCAAATT+AGG | - | chr5_1:15659952-15659971 | Msa0719970:CDS | 20.0% |
| !!! | TTTTAAAGTTACTATAATGG+AGG | + | chr5_1:15660335-15660354 | None:intergenic | 20.0% |
| ! | TATAAATATATGCTCCATGT+AGG | + | chr5_1:15656449-15656468 | None:intergenic | 25.0% |
| ! | TATTTATAGTGCAAAACCAT+TGG | - | chr5_1:15656461-15656480 | Msa0719970:three_prime_UTR | 25.0% |
| !! | TTCATTTTGGATCAAAATAC+GGG | + | chr5_1:15656680-15656699 | None:intergenic | 25.0% |
| !! | GTTCATTTTGGATCAAAATA+CGG | + | chr5_1:15656681-15656700 | None:intergenic | 25.0% |
| !!! | CATCACCAATTTGATTTTTT+TGG | + | chr5_1:15657059-15657078 | None:intergenic | 25.0% |
| ! | AATGAAACTCAGATAAAACT+TGG | - | chr5_1:15657238-15657257 | Msa0719970:intron | 25.0% |
| ! | ATGTTAGAGTAATTACAAGA+AGG | - | chr5_1:15657404-15657423 | Msa0719970:intron | 25.0% |
| ! | TGTTAGAGTAATTACAAGAA+GGG | - | chr5_1:15657405-15657424 | Msa0719970:intron | 25.0% |
| ! | AATATACCATGCCTTTAATA+TGG | - | chr5_1:15658139-15658158 | Msa0719970:intron | 25.0% |
| !! | GATAAAATACTAACTTTTCC+TGG | + | chr5_1:15658297-15658316 | None:intergenic | 25.0% |
| !! | AAAGTTAGTATTTTATCCGA+TGG | - | chr5_1:15658300-15658319 | Msa0719970:intron | 25.0% |
| ! | ATATCAACAAATACTCACTT+TGG | + | chr5_1:15658805-15658824 | None:intergenic | 25.0% |
| ! | GTTCATTTACTTCAGTAATA+TGG | + | chr5_1:15659019-15659038 | None:intergenic | 25.0% |
| !! | AATAATGGAAATTGATTCTC+AGG | - | chr5_1:15659064-15659083 | Msa0719970:intron | 25.0% |
| ! | AATATCTGTTTGCAAAAATC+TGG | + | chr5_1:15659117-15659136 | None:intergenic | 25.0% |
| ! | ACAGATATTATTTATGACTG+TGG | - | chr5_1:15659128-15659147 | Msa0719970:CDS | 25.0% |
| ! | TGCAATTATATGATTACCAA+AGG | + | chr5_1:15659585-15659604 | None:intergenic | 25.0% |
| ! | TAAGTTATATGCATTATGAG+GGG | + | chr5_1:15659866-15659885 | None:intergenic | 25.0% |
| ! | GTAAGTTATATGCATTATGA+GGG | + | chr5_1:15659867-15659886 | None:intergenic | 25.0% |
| ! | CTCATAATGCATATAACTTA+CGG | - | chr5_1:15659866-15659885 | Msa0719970:CDS | 25.0% |
| !! | ATTTTGTGAGCTCAAAAATT+TGG | - | chr5_1:15659908-15659927 | Msa0719970:CDS | 25.0% |
| !! | TATGTTGATTGAATATGACT+TGG | + | chr5_1:15660210-15660229 | None:intergenic | 25.0% |
| ! | TTATTATGTGAATACAAGCT+TGG | - | chr5_1:15660686-15660705 | Msa0719970:five_prime_UTR | 25.0% |
| ! | TTATCTGAACCTTGTAAAAA+AGG | - | chr5_1:15660759-15660778 | Msa0719970:five_prime_UTR | 25.0% |
| ! | AATTATTGAGTGTCACAAAT+AGG | + | chr5_1:15660789-15660808 | None:intergenic | 25.0% |
| ! | ATAGAAAAGACTGTATTGAA+TGG | - | chr5_1:15660814-15660833 | Msa0719970:five_prime_UTR | 25.0% |
| !! | ATACTTGTTATCTTTGCCAA+TGG | + | chr5_1:15656480-15656499 | None:intergenic | 30.0% |
| TATAAAACTTGGGCAAGAAT+TGG | - | chr5_1:15656497-15656516 | Msa0719970:three_prime_UTR | 30.0% | |
| !!! | GATTTTTTTGGGCGTAAAAA+TGG | + | chr5_1:15657047-15657066 | None:intergenic | 30.0% |
| TACGCCCAAAAAAATCAAAT+TGG | - | chr5_1:15657051-15657070 | Msa0719970:intron | 30.0% | |
| !! | CAAATTGGTGATGTATCAAA+AGG | - | chr5_1:15657066-15657085 | Msa0719970:intron | 30.0% |
| AGTTATGCAATTGTCTTCAT+CGG | + | chr5_1:15657311-15657330 | None:intergenic | 30.0% | |
| TATAGTAGAATGTGCATACT+CGG | + | chr5_1:15657356-15657375 | None:intergenic | 30.0% | |
| GAAGAAAACGAAAATGACAA+AGG | + | chr5_1:15657581-15657600 | None:intergenic | 30.0% | |
| !! | CGATTTTGATACATTCTTAC+AGG | + | chr5_1:15657715-15657734 | None:intergenic | 30.0% |
| TCGAAAGACAGATATGATAA+TGG | - | chr5_1:15657732-15657751 | Msa0719970:intron | 30.0% | |
| ACACTGTATGTTATCTTCAT+TGG | + | chr5_1:15657772-15657791 | None:intergenic | 30.0% | |
| ATGAAGATAACATACAGTGT+CGG | - | chr5_1:15657772-15657791 | Msa0719970:intron | 30.0% | |
| GAATTTCTTAAGACTTGTGT+AGG | + | chr5_1:15658091-15658110 | None:intergenic | 30.0% | |
| !! | GCTAACTTGTTCCATATTAA+AGG | + | chr5_1:15658153-15658172 | None:intergenic | 30.0% |
| CTTAACATTTGGAAGAAAAG+AGG | - | chr5_1:15658225-15658244 | Msa0719970:intron | 30.0% | |
| ! | TAATGGAACTGAAAGTCTTT+TGG | - | chr5_1:15658419-15658438 | Msa0719970:intron | 30.0% |
| ! | AAAGTCTTTTGGATAAAGTG+AGG | - | chr5_1:15658430-15658449 | Msa0719970:intron | 30.0% |
| ! | AAGTCTTTTGGATAAAGTGA+GGG | - | chr5_1:15658431-15658450 | Msa0719970:intron | 30.0% |
| ATACCTTGAGTATGATTCAA+GGG | - | chr5_1:15658466-15658485 | Msa0719970:intron | 30.0% | |
| TCCGTTAAGTACATCAATTA+TGG | - | chr5_1:15658936-15658955 | Msa0719970:intron | 30.0% | |
| GCCATAATTGATGTACTTAA+CGG | + | chr5_1:15658940-15658959 | None:intergenic | 30.0% | |
| CTATATGTCAGTGTAGTATT+CGG | - | chr5_1:15659310-15659329 | Msa0719970:CDS | 30.0% | |
| ATTGTGAAATGCAGAAAGAA+TGG | - | chr5_1:15659536-15659555 | Msa0719970:CDS | 30.0% | |
| ! | TGGTTTTTCATGATATCCTT+TGG | - | chr5_1:15659566-15659585 | Msa0719970:CDS | 30.0% |
| ATTTCAACATTGAACTGTTG+AGG | + | chr5_1:15659739-15659758 | None:intergenic | 30.0% | |
| AAGTTATATGCATTATGAGG+GGG | + | chr5_1:15659865-15659884 | None:intergenic | 30.0% | |
| CGTAAGTTATATGCATTATG+AGG | + | chr5_1:15659868-15659887 | None:intergenic | 30.0% | |
| ! | ATTTTTGTGGCAAAGATTCT+AGG | + | chr5_1:15659941-15659960 | None:intergenic | 30.0% |
| ATAGAGAAAACTAAAGTCCT+TGG | - | chr5_1:15660022-15660041 | Msa0719970:CDS | 30.0% | |
| TAGAGAAAACTAAAGTCCTT+GGG | - | chr5_1:15660023-15660042 | Msa0719970:CDS | 30.0% | |
| !!! | AATATGACTTGGTTTTTCCT+TGG | + | chr5_1:15660199-15660218 | None:intergenic | 30.0% |
| TGAAAGTTATTGACCTTTGA+CGG | + | chr5_1:15660269-15660288 | None:intergenic | 30.0% | |
| AGACATTGTACAAAGATACT+TGG | - | chr5_1:15660620-15660639 | Msa0719970:intron | 30.0% | |
| TTGTACAAAGATACTTGGAA+TGG | - | chr5_1:15660625-15660644 | Msa0719970:intron | 30.0% | |
| AAGATACTTGGAATGGAAAA+TGG | - | chr5_1:15660632-15660651 | Msa0719970:five_prime_UTR | 30.0% | |
| AACACATCTAGCAATCTCTT+CGG | + | chr5_1:15656622-15656641 | None:intergenic | 35.0% | |
| ! | ACACAGAAGATCGTTCATTT+TGG | + | chr5_1:15656693-15656712 | None:intergenic | 35.0% |
| TTGTATTCGGCCTATTAATC+AGG | + | chr5_1:15656805-15656824 | None:intergenic | 35.0% | |
| TACTCAGAAACTTGCAGATA+TGG | - | chr5_1:15656920-15656939 | Msa0719970:intron | 35.0% | |
| AAGACTGTAATCAACAACAG+AGG | + | chr5_1:15656955-15656974 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGGCGTAAAAATGG+AGG | + | chr5_1:15657044-15657063 | None:intergenic | 35.0% |
| ! | TGGTGATGTATCAAAAGGAA+TGG | - | chr5_1:15657071-15657090 | Msa0719970:intron | 35.0% |
| GTTATGCAATTGTCTTCATC+GGG | + | chr5_1:15657310-15657329 | None:intergenic | 35.0% | |
| ATAGTAGAATGTGCATACTC+GGG | + | chr5_1:15657355-15657374 | None:intergenic | 35.0% | |
| !! | CATTATTTTCAGGAATGCCA+AGG | + | chr5_1:15657387-15657406 | None:intergenic | 35.0% |
| AGAGTAATTACAAGAAGGGT+TGG | - | chr5_1:15657409-15657428 | Msa0719970:intron | 35.0% | |
| GACATGTAACGCATACAAAA+GGG | + | chr5_1:15657637-15657656 | None:intergenic | 35.0% | |
| TGACATGTAACGCATACAAA+AGG | + | chr5_1:15657638-15657657 | None:intergenic | 35.0% | |
| ! | TTACATGTCATGTCATTTGC+AGG | - | chr5_1:15657648-15657667 | Msa0719970:CDS | 35.0% |
| ! | TACATGTCATGTCATTTGCA+GGG | - | chr5_1:15657649-15657668 | Msa0719970:CDS | 35.0% |
| !! | AAGACAGATATGATAATGGC+CGG | - | chr5_1:15657736-15657755 | Msa0719970:intron | 35.0% |
| ! | AACATACAGTGTCGGATTTA+AGG | - | chr5_1:15657780-15657799 | Msa0719970:intron | 35.0% |
| ! | AGTGTCGGATTTAAGGATAA+TGG | - | chr5_1:15657787-15657806 | Msa0719970:intron | 35.0% |
| ATAATGCCAAACAACATAGC+TGG | - | chr5_1:15657874-15657893 | Msa0719970:intron | 35.0% | |
| ! | TGCGCTTAAAAAGTATGACT+GGG | - | chr5_1:15657897-15657916 | Msa0719970:intron | 35.0% |
| ! | AAAGGCATGGTATATTCAAG+TGG | + | chr5_1:15658135-15658154 | None:intergenic | 35.0% |
| CTTGTTCCATATTAAAGGCA+TGG | + | chr5_1:15658148-15658167 | None:intergenic | 35.0% | |
| AAACTAAGCTCATACAACAC+CGG | + | chr5_1:15658264-15658283 | None:intergenic | 35.0% | |
| ! | ATACTAACTTTTCCTGGAGT+TGG | + | chr5_1:15658291-15658310 | None:intergenic | 35.0% |
| TTCAACAACAACAGAACCAT+CGG | + | chr5_1:15658319-15658338 | None:intergenic | 35.0% | |
| TGAAGTTGGAGGAATTGAAA+TGG | - | chr5_1:15658335-15658354 | Msa0719970:CDS | 35.0% | |
| GAAGTTGGAGGAATTGAAAT+GGG | - | chr5_1:15658336-15658355 | Msa0719970:CDS | 35.0% | |
| CTTGGTACAATTCAGTGTAA+TGG | - | chr5_1:15658402-15658421 | Msa0719970:intron | 35.0% | |
| GATACCTTGAGTATGATTCA+AGG | - | chr5_1:15658465-15658484 | Msa0719970:intron | 35.0% | |
| TACCTTGAGTATGATTCAAG+GGG | - | chr5_1:15658467-15658486 | Msa0719970:intron | 35.0% | |
| ! | TGATAGAACTTGTTTGCTCT+TGG | + | chr5_1:15658593-15658612 | None:intergenic | 35.0% |
| AGCAAACAAGTTCTATCAAG+TGG | - | chr5_1:15658595-15658614 | Msa0719970:intron | 35.0% | |
| GCAAACAAGTTCTATCAAGT+GGG | - | chr5_1:15658596-15658615 | Msa0719970:intron | 35.0% | |
| ! | CATGGAACTTGTTCAAAGTA+GGG | + | chr5_1:15658668-15658687 | None:intergenic | 35.0% |
| ! | TCATGGAACTTGTTCAAAGT+AGG | + | chr5_1:15658669-15658688 | None:intergenic | 35.0% |
| TACTTTGAACAAGTTCCATG+AGG | - | chr5_1:15658668-15658687 | Msa0719970:intron | 35.0% | |
| ATTATCCAAATCGTTCCTCA+TGG | + | chr5_1:15658686-15658705 | None:intergenic | 35.0% | |
| CTGACAGTTCTTTAATGTAC+AGG | - | chr5_1:15658857-15658876 | Msa0719970:CDS | 35.0% | |
| TACTTAACGGAATTACTACC+GGG | + | chr5_1:15658927-15658946 | None:intergenic | 35.0% | |
| GTACTTAACGGAATTACTAC+CGG | + | chr5_1:15658928-15658947 | None:intergenic | 35.0% | |
| ! | AATGGAAATTGATTCTCAGG+TGG | - | chr5_1:15659067-15659086 | Msa0719970:intron | 35.0% |
| !! | TAAAGTGTCGATGCTACATA+GGG | + | chr5_1:15659214-15659233 | None:intergenic | 35.0% |
| !! | TTAAAGTGTCGATGCTACAT+AGG | + | chr5_1:15659215-15659234 | None:intergenic | 35.0% |
| ! | GCATCGACACTTTAAATTGA+AGG | - | chr5_1:15659220-15659239 | Msa0719970:CDS | 35.0% |
| ATCACATTTGTGTCGAACAT+TGG | + | chr5_1:15659251-15659270 | None:intergenic | 35.0% | |
| TACTACACTGACATATAGAC+TGG | + | chr5_1:15659308-15659327 | None:intergenic | 35.0% | |
| ! | ATTTAAAATCGACTGCACGA+TGG | - | chr5_1:15659434-15659453 | Msa0719970:CDS | 35.0% |
| GCAGAAAGAATGGAATGATT+TGG | - | chr5_1:15659546-15659565 | Msa0719970:CDS | 35.0% | |
| AATTGCATCTTGCAGATTGA+AGG | - | chr5_1:15659598-15659617 | Msa0719970:CDS | 35.0% | |
| ATTGAAGGAGCTTTCATACA+GGG | - | chr5_1:15659613-15659632 | Msa0719970:intron | 35.0% | |
| GAGTATGAAACAAACCTTGA+TGG | - | chr5_1:15659658-15659677 | Msa0719970:intron | 35.0% | |
| ! | TGAAACAAACCTTGATGGTT+TGG | - | chr5_1:15659663-15659682 | Msa0719970:intron | 35.0% |
| GAGGAATAGTGTCTATTGTT+GGG | + | chr5_1:15659720-15659739 | None:intergenic | 35.0% | |
| TGAGGAATAGTGTCTATTGT+TGG | + | chr5_1:15659721-15659740 | None:intergenic | 35.0% | |
| CTATGTTCAGCAAAGATTCT+AGG | + | chr5_1:15660006-15660025 | None:intergenic | 35.0% | |
| TAATAAACCATAGTGTCCCA+GGG | + | chr5_1:15660293-15660312 | None:intergenic | 35.0% | |
| TTAATAAACCATAGTGTCCC+AGG | + | chr5_1:15660294-15660313 | None:intergenic | 35.0% | |
| ATCAGATTCAGCATTTCAGT+TGG | - | chr5_1:15660554-15660573 | Msa0719970:intron | 35.0% | |
| TCAGATTCAGCATTTCAGTT+GGG | - | chr5_1:15660555-15660574 | Msa0719970:intron | 35.0% | |
| GGAAAATGGACAACAAGTAA+AGG | - | chr5_1:15660646-15660665 | Msa0719970:five_prime_UTR | 35.0% | |
| !! | TGTAGGCAATTTGTTGGTGA+TGG | + | chr5_1:15656432-15656451 | None:intergenic | 40.0% |
| TCACCAACAAATTGCCTACA+TGG | - | chr5_1:15656432-15656451 | Msa0719970:three_prime_UTR | 40.0% | |
| AATTGGAACTTGATGCAGTG+AGG | - | chr5_1:15656514-15656533 | Msa0719970:three_prime_UTR | 40.0% | |
| ATTGGAACTTGATGCAGTGA+GGG | - | chr5_1:15656515-15656534 | Msa0719970:three_prime_UTR | 40.0% | |
| CGGGAATGTCTTTACTTGTA+AGG | + | chr5_1:15656545-15656564 | None:intergenic | 40.0% | |
| ACAAGTAAAGACATTCCCGA+TGG | - | chr5_1:15656546-15656565 | Msa0719970:three_prime_UTR | 40.0% | |
| CTTGGAGCAAAGAGTAGATT+CGG | - | chr5_1:15656579-15656598 | Msa0719970:three_prime_UTR | 40.0% | |
| GCAATCTCTTCGGCAAATAA+AGG | + | chr5_1:15656612-15656631 | None:intergenic | 40.0% | |
| GAAGAGATTGCTAGATGTGT+TGG | - | chr5_1:15656621-15656640 | Msa0719970:exon | 40.0% | |
| ACTTCCATTTCGTCTTCGAA+TGG | - | chr5_1:15656880-15656899 | Msa0719970:intron | 40.0% | |
| !! | TCACAAGATTGTTTCTGCTG+AGG | - | chr5_1:15657104-15657123 | Msa0719970:intron | 40.0% |
| TAGTAGAATGTGCATACTCG+GGG | + | chr5_1:15657354-15657373 | None:intergenic | 40.0% | |
| TCTACTATAGCAAGATGCCT+TGG | - | chr5_1:15657367-15657386 | Msa0719970:intron | 40.0% | |
| GTAATTACAAGAAGGGTTGG+AGG | - | chr5_1:15657412-15657431 | Msa0719970:intron | 40.0% | |
| TGCCTTACACCTTGAGATAT+TGG | - | chr5_1:15657819-15657838 | Msa0719970:intron | 40.0% | |
| GACCAATATCTCAAGGTGTA+AGG | + | chr5_1:15657824-15657843 | None:intergenic | 40.0% | |
| TTGAGATATTGGTCAACGCT+GGG | - | chr5_1:15657830-15657849 | Msa0719970:intron | 40.0% | |
| TGGCATTATTGCGCTAACAT+CGG | + | chr5_1:15657863-15657882 | None:intergenic | 40.0% | |
| ! | GTGCGCTTAAAAAGTATGAC+TGG | - | chr5_1:15657896-15657915 | Msa0719970:intron | 40.0% |
| ! | GCGCTTAAAAAGTATGACTG+GGG | - | chr5_1:15657898-15657917 | Msa0719970:intron | 40.0% |
| AAGAGGAATATCTCGAGTAC+CGG | - | chr5_1:15658242-15658261 | Msa0719970:intron | 40.0% | |
| ! | CTTAGTTTAAGACCAACTCC+AGG | - | chr5_1:15658276-15658295 | Msa0719970:intron | 40.0% |
| ! | GGTTCTGTTGTTGTTGAAGT+TGG | - | chr5_1:15658321-15658340 | Msa0719970:CDS | 40.0% |
| ! | TCTGTTGTTGTTGAAGTTGG+AGG | - | chr5_1:15658324-15658343 | Msa0719970:CDS | 40.0% |
| TTGAAATGGGTCAGGGTTTA+TGG | - | chr5_1:15658349-15658368 | Msa0719970:CDS | 40.0% | |
| ACCTTGAGTATGATTCAAGG+GGG | - | chr5_1:15658468-15658487 | Msa0719970:intron | 40.0% | |
| TCTTGGAGCTTCTTCTTGAT+AGG | + | chr5_1:15658576-15658595 | None:intergenic | 40.0% | |
| AACAAGTTCTATCAAGTGGG+AGG | - | chr5_1:15658599-15658618 | Msa0719970:intron | 40.0% | |
| AAGTTCCATGAGGAACGATT+TGG | - | chr5_1:15658678-15658697 | Msa0719970:intron | 40.0% | |
| ! | GCTTCTTCATATTTTGTGCC+CGG | - | chr5_1:15658906-15658925 | Msa0719970:intron | 40.0% |
| GTGGAAATAGATCTTCTGAC+AGG | - | chr5_1:15659086-15659105 | Msa0719970:intron | 40.0% | |
| GTGTAAATGCTTCATCAACG+AGG | - | chr5_1:15659344-15659363 | Msa0719970:intron | 40.0% | |
| CTTAGTCGACGTTGCATAAA+AGG | + | chr5_1:15659370-15659389 | None:intergenic | 40.0% | |
| !! | CTTTTATGCAACGTCGACTA+AGG | - | chr5_1:15659368-15659387 | Msa0719970:intron | 40.0% |
| GATTGAAGGAGCTTTCATAC+AGG | - | chr5_1:15659612-15659631 | Msa0719970:intron | 40.0% | |
| TTGAAGGAGCTTTCATACAG+GGG | - | chr5_1:15659614-15659633 | Msa0719970:intron | 40.0% | |
| CTTGCAAAACCAAACCATCA+AGG | + | chr5_1:15659675-15659694 | None:intergenic | 40.0% | |
| !!! | GATGGTTTGGTTTTGCAAGA+TGG | - | chr5_1:15659676-15659695 | Msa0719970:intron | 40.0% |
| !! | TGGTTTTGCAAGATGGAACA+TGG | - | chr5_1:15659683-15659702 | Msa0719970:intron | 40.0% |
| !! | GTTTTTGGACATACCCTTTG+AGG | + | chr5_1:15659797-15659816 | None:intergenic | 40.0% |
| TACGGCTGAAAGTTGAAACA+TGG | - | chr5_1:15659884-15659903 | Msa0719970:CDS | 40.0% | |
| ! | GTTCAGCAAAGATTCTAGGA+CGG | + | chr5_1:15660002-15660021 | None:intergenic | 40.0% |
| !! | GGATGGGCTGATCAAAATAA+GGG | + | chr5_1:15660052-15660071 | None:intergenic | 40.0% |
| TGTTCAGATCATGCGTCATT+GGG | + | chr5_1:15660073-15660092 | None:intergenic | 40.0% | |
| TTGTTCAGATCATGCGTCAT+TGG | + | chr5_1:15660074-15660093 | None:intergenic | 40.0% | |
| CAAGACCCAAGTACGATATT+AGG | - | chr5_1:15660091-15660110 | Msa0719970:intron | 40.0% | |
| AAGCCTCGCCTATCTTAAAA+GGG | - | chr5_1:15660164-15660183 | Msa0719970:intron | 40.0% | |
| !!! | TATCGTCCCCCTTTTAAGAT+AGG | + | chr5_1:15660175-15660194 | None:intergenic | 40.0% |
| !! | GTATACTGTTCTAGAGGTCA+GGG | + | chr5_1:15660244-15660263 | None:intergenic | 40.0% |
| !! | AGTATACTGTTCTAGAGGTC+AGG | + | chr5_1:15660245-15660264 | None:intergenic | 40.0% |
| AGGTCAATAACTTTCAACCC+TGG | - | chr5_1:15660273-15660292 | Msa0719970:five_prime_UTR | 40.0% | |
| GGTCAATAACTTTCAACCCT+GGG | - | chr5_1:15660274-15660293 | Msa0719970:five_prime_UTR | 40.0% | |
| ! | TATTTGTTGGTTGCAGCATC+TGG | - | chr5_1:15660429-15660448 | Msa0719970:intron | 40.0% |
| TTCTTTGACAGCTGATCTTG+TGG | + | chr5_1:15660493-15660512 | None:intergenic | 40.0% | |
| CATCTAAGTTGCTCCATGAT+AGG | + | chr5_1:15660530-15660549 | None:intergenic | 40.0% | |
| TCATGGAGCAACTTAGATGA+TGG | - | chr5_1:15660531-15660550 | Msa0719970:intron | 40.0% | |
| CAGATTCAGCATTTCAGTTG+GGG | - | chr5_1:15660556-15660575 | Msa0719970:intron | 40.0% | |
| AGATTCAGCATTTCAGTTGG+GGG | - | chr5_1:15660557-15660576 | Msa0719970:intron | 40.0% | |
| CCAATGACTTCCTTTACTAC+AGG | + | chr5_1:15660597-15660616 | None:intergenic | 40.0% | |
| CCTGTAGTAAAGGAAGTCAT+TGG | - | chr5_1:15660594-15660613 | Msa0719970:intron | 40.0% | |
| CTGAACCTTGTAAAAAAGGC+AGG | - | chr5_1:15660763-15660782 | Msa0719970:five_prime_UTR | 40.0% | |
| !!! | ATAGGCCTGCCTTTTTTACA+AGG | + | chr5_1:15660771-15660790 | None:intergenic | 40.0% |
| GCTCCATGTAGGCAATTTGT+TGG | + | chr5_1:15656438-15656457 | None:intergenic | 45.0% | |
| AGTAAAGACATTCCCGATGG+TGG | - | chr5_1:15656549-15656568 | Msa0719970:three_prime_UTR | 45.0% | |
| GTAAAGACATTCCCGATGGT+GGG | - | chr5_1:15656550-15656569 | Msa0719970:three_prime_UTR | 45.0% | |
| TAAAGACATTCCCGATGGTG+GGG | - | chr5_1:15656551-15656570 | Msa0719970:three_prime_UTR | 45.0% | |
| CGAATCTACTCTTTGCTCCA+AGG | + | chr5_1:15656581-15656600 | None:intergenic | 45.0% | |
| TGGAGATCGTCTTGCATTTG+TGG | - | chr5_1:15656641-15656660 | Msa0719970:CDS | 45.0% | |
| ACCTGACGAGCCTGATTAAT+AGG | - | chr5_1:15656792-15656811 | Msa0719970:CDS | 45.0% | |
| GAAGCCATTCGAAGACGAAA+TGG | + | chr5_1:15656887-15656906 | None:intergenic | 45.0% | |
| CGTCTTCGAATGGCTTCTTT+AGG | - | chr5_1:15656890-15656909 | Msa0719970:intron | 45.0% | |
| GCTTCAACACTTAGGATAGG+TGG | + | chr5_1:15656990-15657009 | None:intergenic | 45.0% | |
| GCAGCTTCAACACTTAGGAT+AGG | + | chr5_1:15656993-15657012 | None:intergenic | 45.0% | |
| CAACAGCAGCTTCAACACTT+AGG | + | chr5_1:15656998-15657017 | None:intergenic | 45.0% | |
| ATTACAAGAAGGGTTGGAGG+AGG | - | chr5_1:15657415-15657434 | Msa0719970:intron | 45.0% | |
| GTAACGCATACAAAAGGGAG+AGG | + | chr5_1:15657632-15657651 | None:intergenic | 45.0% | |
| !! | ACAGATATGATAATGGCCGG+AGG | - | chr5_1:15657739-15657758 | Msa0719970:intron | 45.0% |
| CTTCATTGGATGTCTTCCTC+CGG | + | chr5_1:15657758-15657777 | None:intergenic | 45.0% | |
| !! | CAGCGTTGACCAATATCTCA+AGG | + | chr5_1:15657831-15657850 | None:intergenic | 45.0% |
| CTTGAGATATTGGTCAACGC+TGG | - | chr5_1:15657829-15657848 | Msa0719970:intron | 45.0% | |
| GGCATTATTGCGCTAACATC+GGG | + | chr5_1:15657862-15657881 | None:intergenic | 45.0% | |
| ATCCTAGTAGATCTGCAGTG+AGG | - | chr5_1:15657959-15657978 | Msa0719970:intron | 45.0% | |
| TCCTAGTAGATCTGCAGTGA+GGG | - | chr5_1:15657960-15657979 | Msa0719970:intron | 45.0% | |
| TGTTGCAGCTACACTTTCGA+TGG | - | chr5_1:15658032-15658051 | Msa0719970:intron | 45.0% | |
| AGCTACACTTTCGATGGAAG+TGG | - | chr5_1:15658038-15658057 | Msa0719970:intron | 45.0% | |
| TGGAGGAATTGAAATGGGTC+AGG | - | chr5_1:15658341-15658360 | Msa0719970:CDS | 45.0% | |
| GGAGGAATTGAAATGGGTCA+GGG | - | chr5_1:15658342-15658361 | Msa0719970:CDS | 45.0% | |
| TCCCCCTTGAATCATACTCA+AGG | + | chr5_1:15658472-15658491 | None:intergenic | 45.0% | |
| ATTCAAGGGGGATTAACTGC+CGG | - | chr5_1:15658480-15658499 | Msa0719970:intron | 45.0% | |
| AAGCAAGTTGTGCAGCAGTT+AGG | - | chr5_1:15658517-15658536 | Msa0719970:intron | 45.0% | |
| GTGGGAGGATCTTATTCTTC+AGG | - | chr5_1:15658614-15658633 | Msa0719970:intron | 45.0% | |
| GAGCTTTCATACAGGGGTTA+GGG | - | chr5_1:15659620-15659639 | Msa0719970:intron | 45.0% | |
| TTGAGGAGAGAACTCTGTGT+TGG | + | chr5_1:15659780-15659799 | None:intergenic | 45.0% | |
| ACACAGAGTTCTCTCCTCAA+AGG | - | chr5_1:15659780-15659799 | Msa0719970:intron | 45.0% | |
| CACAGAGTTCTCTCCTCAAA+GGG | - | chr5_1:15659781-15659800 | Msa0719970:intron | 45.0% | |
| ATCAAAATAAGGGTGGCCCA+AGG | + | chr5_1:15660042-15660061 | None:intergenic | 45.0% | |
| TGGGCTGATCAAAATAAGGG+TGG | + | chr5_1:15660049-15660068 | None:intergenic | 45.0% | |
| !! | GGGATGGGCTGATCAAAATA+AGG | + | chr5_1:15660053-15660072 | None:intergenic | 45.0% |
| AGATCATGCGTCATTGGGAT+GGG | + | chr5_1:15660068-15660087 | None:intergenic | 45.0% | |
| GCAGGCCTAATATCGTACTT+GGG | + | chr5_1:15660099-15660118 | None:intergenic | 45.0% | |
| TGCAGGCCTAATATCGTACT+TGG | + | chr5_1:15660100-15660119 | None:intergenic | 45.0% | |
| GAAGCCTCGCCTATCTTAAA+AGG | - | chr5_1:15660163-15660182 | Msa0719970:intron | 45.0% | |
| AGCCTCGCCTATCTTAAAAG+GGG | - | chr5_1:15660165-15660184 | Msa0719970:intron | 45.0% | |
| ! | TCTAGAGGTCAGGGTGTTTA+GGG | + | chr5_1:15660235-15660254 | None:intergenic | 45.0% |
| ! | TTCTAGAGGTCAGGGTGTTT+AGG | + | chr5_1:15660236-15660255 | None:intergenic | 45.0% |
| ACGGCAGTATACTGTTCTAG+AGG | + | chr5_1:15660250-15660269 | None:intergenic | 45.0% | |
| GAACAGTATACTGCCGTCAA+AGG | - | chr5_1:15660253-15660272 | Msa0719970:five_prime_UTR | 45.0% | |
| ACTGAAGCTGCTAGAAGCAA+GGG | + | chr5_1:15660462-15660481 | None:intergenic | 45.0% | |
| AACTGAAGCTGCTAGAAGCA+AGG | + | chr5_1:15660463-15660482 | None:intergenic | 45.0% | |
| TTACTACAGGCATGGTTGCA+GGG | + | chr5_1:15660584-15660603 | None:intergenic | 45.0% | |
| TTTACTACAGGCATGGTTGC+AGG | + | chr5_1:15660585-15660604 | None:intergenic | 45.0% | |
| TGCAACCATGCCTGTAGTAA+AGG | - | chr5_1:15660584-15660603 | Msa0719970:intron | 45.0% | |
| GACTTCCTTTACTACAGGCA+TGG | + | chr5_1:15660592-15660611 | None:intergenic | 45.0% | |
| !!! | TATTTTTTAATATTTGTATT+CGG | + | chr5_1:15656818-15656837 | None:intergenic | 5.0% |
| GCCTATTAATCAGGCTCGTC+AGG | + | chr5_1:15656796-15656815 | None:intergenic | 50.0% | |
| AGAAGGGTTGGAGGAGGATT+TGG | - | chr5_1:15657421-15657440 | Msa0719970:intron | 50.0% | |
| TGGAGGAGGATTTGGAGGAA+AGG | - | chr5_1:15657429-15657448 | Msa0719970:intron | 50.0% | |
| GGAGGAGGATTTGGAGGAAA+GGG | - | chr5_1:15657430-15657449 | Msa0719970:intron | 50.0% | |
| ! | TTTTTGTGCTGCGAGTGCAC+AGG | + | chr5_1:15657683-15657702 | None:intergenic | 50.0% |
| AGCGCACCAGCTATGTTGTT+TGG | + | chr5_1:15657883-15657902 | None:intergenic | 50.0% | |
| CCTAGTAGATCTGCAGTGAG+GGG | - | chr5_1:15657961-15657980 | Msa0719970:intron | 50.0% | |
| CTAGTAGATCTGCAGTGAGG+GGG | - | chr5_1:15657962-15657981 | Msa0719970:intron | 50.0% | |
| GGGTCAGGGTTTATGGACAA+AGG | - | chr5_1:15658356-15658375 | Msa0719970:CDS | 50.0% | |
| TTCAAGGGGGATTAACTGCC+GGG | - | chr5_1:15658481-15658500 | Msa0719970:intron | 50.0% | |
| TGCTTCTGATGTAGTGCTCC+CGG | + | chr5_1:15658502-15658521 | None:intergenic | 50.0% | |
| TTATGGCGCTGCAGTTAGTG+AGG | - | chr5_1:15658953-15658972 | Msa0719970:intron | 50.0% | |
| ACAAAGTCTCAACCCTGCTG+TGG | - | chr5_1:15659151-15659170 | Msa0719970:CDS | 50.0% | |
| CTCAACCCTGCTGTGGATTT+AGG | - | chr5_1:15659158-15659177 | Msa0719970:CDS | 50.0% | |
| CCTGTCCTAAATCCACAGCA+GGG | + | chr5_1:15659166-15659185 | None:intergenic | 50.0% | |
| ACCTGTCCTAAATCCACAGC+AGG | + | chr5_1:15659167-15659186 | None:intergenic | 50.0% | |
| ! | ATGCAACGTCGACTAAGGCA+CGG | - | chr5_1:15659373-15659392 | Msa0719970:intron | 50.0% |
| GGAGCTTTCATACAGGGGTT+AGG | - | chr5_1:15659619-15659638 | Msa0719970:intron | 50.0% | |
| !! | GTTGGTGATGCTCACTGTTG+AGG | + | chr5_1:15659762-15659781 | None:intergenic | 50.0% |
| CAGACTGTCCTATGAGCTCA+AGG | - | chr5_1:15659975-15659994 | Msa0719970:CDS | 50.0% | |
| CAGATCATGCGTCATTGGGA+TGG | + | chr5_1:15660069-15660088 | None:intergenic | 50.0% | |
| CGATATTAGGCCTGCAATGC+AGG | - | chr5_1:15660104-15660123 | Msa0719970:intron | 50.0% | |
| ACGTTAAGGTCCTGCATTGC+AGG | + | chr5_1:15660117-15660136 | None:intergenic | 50.0% | |
| GGGGATCACACACAACGTTA+AGG | + | chr5_1:15660131-15660150 | None:intergenic | 50.0% | |
| GCCTCGCCTATCTTAAAAGG+GGG | - | chr5_1:15660166-15660185 | Msa0719970:intron | 50.0% | |
| !!! | TCCCCCTTTTAAGATAGGCG+AGG | + | chr5_1:15660170-15660189 | None:intergenic | 50.0% |
| TAAAAGGGGGACGATAGCCA+AGG | - | chr5_1:15660179-15660198 | Msa0719970:CDS | 50.0% | |
| CTTTCAACCCTGGGACACTA+TGG | - | chr5_1:15660283-15660302 | Msa0719970:five_prime_UTR | 50.0% | |
| GATCAGCTGTCAAAGAAGCC+AGG | - | chr5_1:15660496-15660515 | Msa0719970:intron | 50.0% | |
| ! | CCATGATAGGAGCTGTTTCC+TGG | + | chr5_1:15660517-15660536 | None:intergenic | 50.0% |
| CCAGGAAACAGCTCCTATCA+TGG | - | chr5_1:15660514-15660533 | Msa0719970:intron | 50.0% | |
| TCCAAGGTTCTCCCCACCAT+CGG | + | chr5_1:15656565-15656584 | None:intergenic | 55.0% | |
| AGGGTTGGAGGAGGATTTGG+AGG | - | chr5_1:15657424-15657443 | Msa0719970:intron | 55.0% | |
| CCCCTCACTGCAGATCTACT+AGG | + | chr5_1:15657964-15657983 | None:intergenic | 55.0% | |
| AATGATCCCTGCGTGTCACC+TGG | + | chr5_1:15657988-15658007 | None:intergenic | 55.0% | |
| CAGGGATCATTCATCGCCGA+AGG | - | chr5_1:15657997-15658016 | Msa0719970:intron | 55.0% | |
| CAAATGACTGCGTTCGCGCT+TGG | - | chr5_1:15658384-15658403 | Msa0719970:intron | 55.0% | |
| ! | CCCTGCTGTGGATTTAGGAC+AGG | - | chr5_1:15659163-15659182 | Msa0719970:CDS | 55.0% |
| AGGACGGTCCTTGAGCTCAT+AGG | + | chr5_1:15659986-15660005 | None:intergenic | 55.0% | |
| ACGTTGTGTGTGATCCCCAC+CGG | - | chr5_1:15660133-15660152 | Msa0719970:intron | 55.0% | |
| AGGCTTCGTGAAATCCGGTG+GGG | + | chr5_1:15660150-15660169 | None:intergenic | 55.0% | |
| GAGGCTTCGTGAAATCCGGT+GGG | + | chr5_1:15660151-15660170 | None:intergenic | 55.0% | |
| AGGCGAGGCTTCGTGAAATC+CGG | + | chr5_1:15660155-15660174 | None:intergenic | 55.0% | |
| GAAGCTGCTAGAAGCAAGGG+TGG | + | chr5_1:15660459-15660478 | None:intergenic | 55.0% | |
| CCAAGGTTCTCCCCACCATC+GGG | + | chr5_1:15656564-15656583 | None:intergenic | 60.0% | |
| TTCATCGGGTACAGCGAGCG+CGG | + | chr5_1:15657296-15657315 | None:intergenic | 60.0% | |
| CGAGGCTTCGTGAAATCCGG+TGG | + | chr5_1:15660152-15660171 | None:intergenic | 60.0% | |
| !! | CCCGATGGTGGGGAGAACCT+TGG | - | chr5_1:15656561-15656580 | Msa0719970:three_prime_UTR | 65.0% |
| AGATCTGCAGTGAGGGGGCC+AGG | - | chr5_1:15657967-15657986 | Msa0719970:intron | 65.0% | |
| AGGGGGCCAGGTGACACGCA+GGG | - | chr5_1:15657979-15657998 | Msa0719970:intron | 70.0% | |
| GAGGGGGCCAGGTGACACGC+AGG | - | chr5_1:15657978-15657997 | Msa0719970:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 15656421 | 15660872 | 15656421 | ID=Msa0719970;Name=Msa0719970 |
| chr5_1 | mRNA | 15656421 | 15660872 | 15656421 | ID=Msa0719970-mRNA-1;Parent=Msa0719970;Name=Msa0719970-mRNA-1;_AED=0.36;_eAED=0.36;_QI=420|0.44|0.5|1|0.44|0.4|10|207|514 |
| chr5_1 | exon | 15656421 | 15656848 | 15656421 | ID=Msa0719970-mRNA-1:exon:6052;Parent=Msa0719970-mRNA-1 |
| chr5_1 | exon | 15657491 | 15657680 | 15657491 | ID=Msa0719970-mRNA-1:exon:6051;Parent=Msa0719970-mRNA-1 |
| chr5_1 | exon | 15658319 | 15658386 | 15658319 | ID=Msa0719970-mRNA-1:exon:6050;Parent=Msa0719970-mRNA-1 |
| chr5_1 | exon | 15658690 | 15658915 | 15658690 | ID=Msa0719970-mRNA-1:exon:6049;Parent=Msa0719970-mRNA-1 |
| chr5_1 | exon | 15658955 | 15659053 | 15658955 | ID=Msa0719970-mRNA-1:exon:6048;Parent=Msa0719970-mRNA-1 |
| chr5_1 | exon | 15659096 | 15659342 | 15659096 | ID=Msa0719970-mRNA-1:exon:6047;Parent=Msa0719970-mRNA-1 |
| chr5_1 | exon | 15659385 | 15659623 | 15659385 | ID=Msa0719970-mRNA-1:exon:6046;Parent=Msa0719970-mRNA-1 |
| chr5_1 | exon | 15659825 | 15660043 | 15659825 | ID=Msa0719970-mRNA-1:exon:6045;Parent=Msa0719970-mRNA-1 |
| chr5_1 | exon | 15660168 | 15660381 | 15660168 | ID=Msa0719970-mRNA-1:exon:6044;Parent=Msa0719970-mRNA-1 |
| chr5_1 | exon | 15660631 | 15660872 | 15660631 | ID=Msa0719970-mRNA-1:exon:6043;Parent=Msa0719970-mRNA-1 |
| chr5_1 | five_prime_UTR | 15660631 | 15660872 | 15660631 | ID=Msa0719970-mRNA-1:five_prime_utr;Parent=Msa0719970-mRNA-1 |
| chr5_1 | five_prime_UTR | 15660204 | 15660381 | 15660204 | ID=Msa0719970-mRNA-1:five_prime_utr;Parent=Msa0719970-mRNA-1 |
| chr5_1 | CDS | 15660168 | 15660203 | 15660168 | ID=Msa0719970-mRNA-1:cds;Parent=Msa0719970-mRNA-1 |
| chr5_1 | CDS | 15659825 | 15660043 | 15659825 | ID=Msa0719970-mRNA-1:cds;Parent=Msa0719970-mRNA-1 |
| chr5_1 | CDS | 15659385 | 15659623 | 15659385 | ID=Msa0719970-mRNA-1:cds;Parent=Msa0719970-mRNA-1 |
| chr5_1 | CDS | 15659096 | 15659342 | 15659096 | ID=Msa0719970-mRNA-1:cds;Parent=Msa0719970-mRNA-1 |
| chr5_1 | CDS | 15658955 | 15659053 | 15658955 | ID=Msa0719970-mRNA-1:cds;Parent=Msa0719970-mRNA-1 |
| chr5_1 | CDS | 15658690 | 15658915 | 15658690 | ID=Msa0719970-mRNA-1:cds;Parent=Msa0719970-mRNA-1 |
| chr5_1 | CDS | 15658319 | 15658386 | 15658319 | ID=Msa0719970-mRNA-1:cds;Parent=Msa0719970-mRNA-1 |
| chr5_1 | CDS | 15657491 | 15657680 | 15657491 | ID=Msa0719970-mRNA-1:cds;Parent=Msa0719970-mRNA-1 |
| chr5_1 | CDS | 15656628 | 15656848 | 15656628 | ID=Msa0719970-mRNA-1:cds;Parent=Msa0719970-mRNA-1 |
| chr5_1 | three_prime_UTR | 15656421 | 15656627 | 15656421 | ID=Msa0719970-mRNA-1:three_prime_utr;Parent=Msa0719970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
