AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1304180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1304180 MtrunA17_Chr4g0062931 93.772 562 15 4 1 549 1 555 0.0 854
Msa1304180 MtrunA17_Chr5g0429721 32.911 79 52 1 5 82 34 112 1.43e-12 69.7
Msa1304180 MtrunA17_Chr1g0210241 35.955 89 56 1 1 88 1 89 7.29e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1304180 AT5G19960.1 42.487 193 66 5 1 184 1 157 8.00e-33 129
Msa1304180 AT5G19960.1 41.379 116 66 1 425 540 221 334 1.14e-15 79.0
Msa1304180 AT5G19960.2 41.379 116 66 1 425 540 133 246 6.37e-16 78.2
Msa1304180 AT4G39260.3 42.857 84 47 1 9 91 8 91 6.13e-15 70.9
Msa1304180 AT3G47120.2 39.474 76 45 1 5 79 34 109 3.30e-13 70.9
Msa1304180 AT3G47120.1 39.474 76 45 1 5 79 34 109 5.52e-13 70.9

Find 152 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCGTGTGGTTAAAGTTAA+TGG 0.201362 8_3:-67447052 Msa1304180:CDS
GTTATGAATCAGACTATTAA+TGG 0.247320 8_3:-67447073 Msa1304180:intron
GGTGGTGGCAGATCAAATTT+TGG 0.252328 8_3:-67446998 Msa1304180:CDS
CGCACTGTCTTCAATTTGTA+TGG 0.310277 8_3:-67447463 Msa1304180:CDS
GGGAAGACCACCAACGTAAA+TGG 0.322442 8_3:+67447510 None:intergenic
GGTGGAGGTGGCGGTGGTGG+TGG 0.340367 8_3:-67447013 Msa1304180:CDS
GGCGGTGGAGGTGGCGGTGG+TGG 0.354294 8_3:-67447016 Msa1304180:CDS
CCCTATCCCTGTCACGGTCT+CGG 0.354327 8_3:+67446666 None:intergenic
CATTACCATGATCATAATCT+TGG 0.358631 8_3:+67446891 None:intergenic
TGAAGTAGTAAATATCAATT+TGG 0.359952 8_3:-67447651 None:intergenic
CCCTATCCCTATCATGGTCT+CGG 0.372822 8_3:+67446573 None:intergenic
GTGAGGTCTCGTGGCGGTGG+AGG 0.372910 8_3:-67447028 Msa1304180:CDS
ATTGGAATCATGACGGTGAT+AGG 0.374936 8_3:-67446205 Msa1304180:CDS
CTTAAAATAAATTTAGCATA+TGG 0.379102 8_3:-67443735 Msa1304180:three_prime_UTR
TCCTATCTCTGTCACGGTCT+CGG 0.379142 8_3:+67446387 None:intergenic
TGTATGGTAAGATTCATCTT+TGG 0.384035 8_3:-67443857 Msa1304180:three_prime_UTR
ATAGGTCTCGAGACCATGAT+AGG 0.390177 8_3:-67446766 Msa1304180:CDS
CCCTGTCACGGTCACGGTCT+CGG 0.400331 8_3:+67446480 None:intergenic
CTTACAAATGGAAGTCTAGA+TGG 0.403989 8_3:-67443985 Msa1304180:CDS
AGGTCTCGTGGCGGTGGAGG+TGG 0.410261 8_3:-67447025 Msa1304180:CDS
ATGATGAAAGGAATGGAGAT+TGG 0.413487 8_3:-67446946 Msa1304180:CDS
CCTGTCACGGTCACGGTCTC+GGG 0.417238 8_3:+67446481 None:intergenic
ATAGATCCCGAGACCATGAT+AGG 0.418281 8_3:-67446580 Msa1304180:CDS
GCCGTGTGGTTAAAGTTAAT+GGG 0.420536 8_3:-67447051 Msa1304180:CDS
AAAGCGCGTTAGACCGTGAT+AGG 0.422370 8_3:-67446505 Msa1304180:CDS
AAGATTATAGCACTGCTTGT+TGG 0.425567 8_3:+67443784 None:intergenic
CGTGGCGGTGGAGGTGGCGG+TGG 0.426158 8_3:-67447019 Msa1304180:CDS
AGAAAGAAGACTTAATGTTA+TGG 0.428868 8_3:-67445349 Msa1304180:CDS
AAAGCATGTTAGATGATGAT+TGG 0.430802 8_3:-67446223 Msa1304180:CDS
TTAGCATATGGCATCTTACC+TGG 0.431591 8_3:-67443723 Msa1304180:three_prime_UTR
CCCGAGACCGTGACCGTGAC+AGG 0.432306 8_3:-67446481 Msa1304180:CDS
TTCTAAGCTGGAAGAGGGAT+TGG 0.434291 8_3:-67445373 Msa1304180:CDS
TTCTATCCCTATCCCTATCA+TGG 0.434809 8_3:+67446753 None:intergenic
TTACCTTGGTCAACTGCATC+TGG 0.438734 8_3:+67445142 None:intergenic
TCTCGTGGCGGTGGAGGTGG+CGG 0.438886 8_3:-67447022 Msa1304180:CDS
CCTATCCCTGTCACGGTCTC+GGG 0.441091 8_3:+67446667 None:intergenic
CAAGCTAGAGCAAGTATGTT+AGG 0.441748 8_3:-67446608 Msa1304180:CDS
GGTGATGGTGATGGTGGTCT+TGG 0.448887 8_3:-67444012 Msa1304180:CDS
ATCAATGACCAACGTACACT+TGG 0.451190 8_3:-67447280 Msa1304180:CDS
CCTATCTCTGTCACGGTCTC+GGG 0.453975 8_3:+67446388 None:intergenic
AAAGCATGTTAGTCCGTGAT+AGG 0.455542 8_3:-67446691 Msa1304180:CDS
AACCATGATGTCACGGTCTC+GGG 0.456700 8_3:+67446295 None:intergenic
GGGGTGAGGTCTCGTGGCGG+TGG 0.457192 8_3:-67447031 Msa1304180:CDS
GGAGTTACAAAAGCACTCTA+AGG 0.459318 8_3:-67445328 Msa1304180:intron
GAGACCGTGACATCATGGTT+AGG 0.463473 8_3:-67446292 Msa1304180:CDS
TGATAGGGCTGAAAATGAAC+TGG 0.463823 8_3:-67446189 Msa1304180:CDS
TGATGAAAGGAATGGAGATT+GGG 0.465545 8_3:-67446945 Msa1304180:CDS
CTCATCATTGTGGTCCCCAT+TGG 0.467282 8_3:+67445889 None:intergenic
CCCGAGACCGTGACAGAGAT+AGG 0.470681 8_3:-67446388 Msa1304180:CDS
CGAGACCAAGATTATGATCA+TGG 0.478575 8_3:-67446896 Msa1304180:CDS
AGAGGTCTCGAGACCGTGAT+AGG 0.480387 8_3:-67446802 Msa1304180:CDS
GTAATGAGAAAGATGGATAC+AGG 0.480470 8_3:-67446874 Msa1304180:CDS
AAAGATGGATACAGGAATAG+AGG 0.481913 8_3:-67446866 Msa1304180:CDS
ACAGGAATAGAGGCAGTGAT+TGG 0.482052 8_3:-67446856 Msa1304180:CDS
ATAGTCCATCAGATTCCAAT+GGG 0.482340 8_3:-67445904 Msa1304180:CDS
TTCTATCCCTATCCCTATCA+TGG 0.483071 8_3:+67446567 None:intergenic
CCCGAGACCGTGACAGGGAT+AGG 0.483596 8_3:-67446667 Msa1304180:CDS
TGTTTCATCAGTGGCGTCGA+AGG 0.487655 8_3:+67447489 None:intergenic
ACTGGAAAACAGCAGGGTAC+AGG 0.494266 8_3:-67446171 Msa1304180:CDS
ATAGGTCCCGAGACCGTGAC+AGG 0.495188 8_3:-67446673 Msa1304180:CDS
TCGAGTCCAATCACCACCTC+TGG 0.499545 8_3:+67446832 None:intergenic
ATTGGACCAGAGGTGGTGAT+TGG 0.502244 8_3:-67446838 Msa1304180:CDS
TAACCATGATGTCACGGTCT+CGG 0.507957 8_3:+67446294 None:intergenic
GGTCTTGGACAACTTACAAA+TGG 0.508402 8_3:-67443997 Msa1304180:CDS
ACAGGGTGGAGATGTGGATA+AGG 0.508614 8_3:-67446153 Msa1304180:CDS
CCTATCCCTATCATGGTCTC+GGG 0.509297 8_3:+67446574 None:intergenic
AGACCGTGACATCATGGTTA+GGG 0.509461 8_3:-67446291 Msa1304180:CDS
CATCATAATGATGAAAGGAA+TGG 0.517662 8_3:-67446953 Msa1304180:CDS
CCCGAGACCATGATAGGGAT+AGG 0.517941 8_3:-67446574 Msa1304180:CDS
CACGGTCTCGGGACCTATCA+CGG 0.518091 8_3:+67446492 None:intergenic
AAAATGAACTGGAAAACAGC+AGG 0.521165 8_3:-67446178 Msa1304180:CDS
CTCGAGACCATGATAGGGAT+AGG 0.523344 8_3:-67446760 Msa1304180:CDS
TTGTAACTTTCACAAACCCT+AGG 0.525397 8_3:-67447243 Msa1304180:CDS
TAGCATCAATTGCAGACCTA+GGG 0.528965 8_3:+67447227 None:intergenic
CACGGTCTCGGGACCTATCA+CGG 0.531377 8_3:+67446678 None:intergenic
GATAGCTCCATTTACGTTGG+TGG 0.531498 8_3:-67447517 Msa1304180:CDS
GATCATGGTAATGAGAAAGA+TGG 0.531558 8_3:-67446881 Msa1304180:CDS
TATCTCACTAGCTCCATGTA+TGG 0.533587 8_3:-67443873 Msa1304180:three_prime_UTR
CTGGATCCACATCTAAGTTA+CGG 0.535060 8_3:+67446129 None:intergenic
TCAGGTTTCTAAGCTGGAAG+AGG 0.536137 8_3:-67445379 Msa1304180:intron
CCGAGACCGTGACAGGGATA+GGG 0.537071 8_3:-67446666 Msa1304180:CDS
AGAGTGAAGGAGAAAGACTA+TGG 0.541578 8_3:-67447619 Msa1304180:five_prime_UTR
CTCGAGACCTATCACGGTCG+CGG 0.542402 8_3:+67446777 None:intergenic
CTGGAAAACAGCAGGGTACA+GGG 0.545302 8_3:-67446170 Msa1304180:CDS
CAGGTTTCTAAGCTGGAAGA+GGG 0.546464 8_3:-67445378 Msa1304180:CDS
AGAAGAGTTGAGCATTTGCA+AGG 0.546715 8_3:-67446362 Msa1304180:CDS
AAGATGAATCTTACCATACA+TGG 0.547436 8_3:+67443860 None:intergenic
GTCCCGAGACCGTGACATCA+TGG 0.550463 8_3:-67446297 Msa1304180:CDS
ATAGCATCAATTGCAGACCT+AGG 0.550720 8_3:+67447226 None:intergenic
GACTACCTTGACATCAAGAA+TGG 0.552219 8_3:+67447438 None:intergenic
TTATACCCCTGTCACGGTCA+CGG 0.557856 8_3:+67446474 None:intergenic
CCGAGACCATGATAGGGATA+GGG 0.559495 8_3:-67446573 Msa1304180:CDS
CCCCATTAACTTTAACCACA+CGG 0.561289 8_3:+67447050 None:intergenic
GAGCATATGCAAAATTATGA+TGG 0.562214 8_3:-67446725 Msa1304180:CDS
CAGGGTACAGGGTGGAGATG+TGG 0.563252 8_3:-67446159 Msa1304180:CDS
GAAAGCATGTTAGATCGTGA+TGG 0.563810 8_3:-67446413 Msa1304180:CDS
AAAGCATGTTAGACCGCGAT+GGG 0.565934 8_3:-67446319 Msa1304180:CDS
TTCTATCCCTATCCCTGTCA+CGG 0.566463 8_3:+67446660 None:intergenic
GAACACATGCTAGATTATGA+TGG 0.568841 8_3:-67446632 Msa1304180:CDS
GAAATTCATACTATATTGTG+CGG 0.571168 8_3:-67443826 Msa1304180:three_prime_UTR
TGGTCCCCATTGGAATCTGA+TGG 0.575643 8_3:+67445899 None:intergenic
GTTTCATCAGTGGCGTCGAA+GGG 0.576277 8_3:+67447490 None:intergenic
TGGTTAAAGTTAATGGGGTG+AGG 0.576628 8_3:-67447045 Msa1304180:CDS
TCTTACTCGATGTTTCTCCT+CGG 0.578233 8_3:+67446044 None:intergenic
ATTATCATCATAATGATGAA+AGG 0.578991 8_3:-67446958 Msa1304180:CDS
AATAGTCCATCAGATTCCAA+TGG 0.582473 8_3:-67445905 Msa1304180:CDS
AGGAATGGAGATTGGGATCG+TGG 0.582856 8_3:-67446938 Msa1304180:CDS
TCGAGACCATGATAGGGATA+GGG 0.583018 8_3:-67446759 Msa1304180:CDS
GAAAGCATGTTAGACCGCGA+TGG 0.583363 8_3:-67446320 Msa1304180:CDS
TTCTACTCCTATCTCTGTCA+CGG 0.583559 8_3:+67446381 None:intergenic
TAGCATATGGCATCTTACCT+GGG 0.588864 8_3:-67443722 Msa1304180:three_prime_UTR
TGGCGCCATTCTTGATGTCA+AGG 0.589109 8_3:-67447443 Msa1304180:intron
CATGGTCTCGAGACCTATCA+CGG 0.589442 8_3:+67446771 None:intergenic
GTTAATGGGGTGAGGTCTCG+TGG 0.592393 8_3:-67447037 Msa1304180:CDS
TTGGAATCATGACGGTGATA+GGG 0.593640 8_3:-67446204 Msa1304180:CDS
GGCAGTGATTGGACCAGAGG+TGG 0.596616 8_3:-67446845 Msa1304180:CDS
CCGAGACCGTGACCGTGACA+GGG 0.596911 8_3:-67446480 Msa1304180:CDS
AAAGCATGTTAGATCGTGAT+GGG 0.597103 8_3:-67446412 Msa1304180:CDS
ATTGGACTCGACAGCATCAG+AGG 0.597239 8_3:-67446820 Msa1304180:CDS
GAGAGTGACGGTGATGGTGA+TGG 0.598421 8_3:-67444021 Msa1304180:CDS
TTGTCTCTTTAATTGCCTAG+TGG 0.600658 8_3:-67443903 Msa1304180:three_prime_UTR
TCAATGACCAACGTACACTT+GGG 0.603480 8_3:-67447279 Msa1304180:CDS
TCAATATTGTTCGAGAGTGA+CGG 0.605658 8_3:-67444033 Msa1304180:CDS
TAGATCCCGAGACCATGATA+GGG 0.613104 8_3:-67446579 Msa1304180:CDS
AGTGCGAATTGTTTCATCAG+TGG 0.616718 8_3:+67447480 None:intergenic
TAAGGACCGTAACTTAGATG+TGG 0.622168 8_3:-67446135 Msa1304180:CDS
TCAGTTCCACAAAATGACAC+TGG 0.624699 8_3:-67447545 Msa1304180:exon
AGAGGCAGTGATTGGACCAG+AGG 0.630012 8_3:-67446848 Msa1304180:CDS
AGCATTTCCCAAGTGTACGT+TGG 0.632194 8_3:+67447272 None:intergenic
GATGCTATCAACGATATGAA+CGG 0.633466 8_3:-67447211 Msa1304180:CDS
TATCCCTAACCATGATGTCA+CGG 0.634194 8_3:+67446288 None:intergenic
ATCACATTACCTCATCATTG+TGG 0.638871 8_3:+67445879 None:intergenic
TAGGTCTCGAGACCATGATA+GGG 0.644021 8_3:-67446765 Msa1304180:CDS
CACGGTCTCGGGACCCATCG+CGG 0.649874 8_3:+67446306 None:intergenic
AGTGACGGTGATGGTGATGG+TGG 0.650592 8_3:-67444018 Msa1304180:CDS
GATGATAGCTCCATTTACGT+TGG 0.659955 8_3:-67447520 Msa1304180:CDS
AGGTAGAAGATGAATTAGAG+AGG 0.662402 8_3:-67445722 Msa1304180:CDS
CGAGACCGTGACCGTGACAG+GGG 0.664208 8_3:-67446479 Msa1304180:CDS
CAATGGGGACCACAATGATG+AGG 0.667084 8_3:-67445888 Msa1304180:intron
TCGCCAGATGCAGTTGACCA+AGG 0.667948 8_3:-67445145 Msa1304180:intron
TTGTTCGAGAGTGACGGTGA+TGG 0.673128 8_3:-67444027 Msa1304180:CDS
AAATGAACTGGAAAACAGCA+GGG 0.689851 8_3:-67446177 Msa1304180:CDS
ATATTTACCGCAGAAACGGG+AGG 0.695680 8_3:-67445202 Msa1304180:intron
AATGGGGTGAGGTCTCGTGG+CGG 0.699964 8_3:-67447034 Msa1304180:CDS
GATGATGATTGGAATCATGA+CGG 0.709264 8_3:-67446212 Msa1304180:CDS
TAGGTCCCGAGACCGTGACA+GGG 0.714552 8_3:-67446672 Msa1304180:CDS
CCGTGTGGTTAAAGTTAATG+GGG 0.715692 8_3:-67447050 Msa1304180:CDS
TCAGACTATTAATGGCCGTG+TGG 0.721965 8_3:-67447065 Msa1304180:intron
AATGGAGATTGGGATCGTGG+CGG 0.727702 8_3:-67446935 Msa1304180:CDS
GCAATTAAAGAGACAACACA+TGG 0.728798 8_3:+67443910 None:intergenic
GAAAACAGCAGGGTACAGGG+TGG 0.744053 8_3:-67446167 Msa1304180:CDS
TAGTCCATCAGATTCCAATG+GGG 0.775487 8_3:-67445903 Msa1304180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTAAATAATTAACAA+GGG + chr8_3:67443929-67443948 None:intergenic 10.0%
!! AAGAAATTAAATAATTAACA+AGG + chr8_3:67443930-67443949 None:intergenic 10.0%
!! TAATAATCAATTCAAGTAAT+TGG - chr8_3:67443954-67443973 Msa1304180:three_prime_UTR 15.0%
!! AATAATCAATTCAAGTAATT+GGG - chr8_3:67443955-67443974 Msa1304180:three_prime_UTR 15.0%
!! AAACTAAAATGAATGAATAA+TGG - chr8_3:67445655-67445674 Msa1304180:intron 15.0%
!! TTATCAAACATTCAAATATT+GGG + chr8_3:67445790-67445809 None:intergenic 15.0%
!! TTTATCAAACATTCAAATAT+TGG + chr8_3:67445791-67445810 None:intergenic 15.0%
!!! AAATATAACTTTTTGGAAAA+GGG + chr8_3:67446648-67446667 None:intergenic 15.0%
!!! AAAATATAACTTTTTGGAAA+AGG + chr8_3:67446649-67446668 None:intergenic 15.0%
!! CTTAAAATAAATTTAGCATA+TGG - chr8_3:67447570-67447589 Msa1304180:five_prime_UTR 15.0%
!! AGTTTATTTGTGTTAATGTT+TGG - chr8_3:67444155-67444174 Msa1304180:intron 20.0%
!! ATTATCATCATAATGATGAA+AGG - chr8_3:67444347-67444366 Msa1304180:intron 20.0%
!!! ATAATGGAAATTTGTCAATA+TGG - chr8_3:67445671-67445690 Msa1304180:intron 20.0%
!! TAAATGATATTGCTAACATT+GGG - chr8_3:67446223-67446242 Msa1304180:CDS 20.0%
!! TAAACATTATAAAAAGTCAC+AGG + chr8_3:67446391-67446410 None:intergenic 20.0%
!! AATGTTTAAATTTCACAATG+TGG - chr8_3:67446403-67446422 Msa1304180:CDS 20.0%
!!! AATATAACTTTTTGGAAAAG+GGG + chr8_3:67446647-67446666 None:intergenic 20.0%
!!! TTGATTTTCTAATCATTCAT+AGG + chr8_3:67446837-67446856 None:intergenic 20.0%
!! AAACATTGCTTAAAATAATG+TGG + chr8_3:67446862-67446881 None:intergenic 20.0%
!!! AAGAAATTTTTAATCAATCC+AGG + chr8_3:67447630-67447649 None:intergenic 20.0%
! GTTATGAATCAGACTATTAA+TGG - chr8_3:67444232-67444251 Msa1304180:intron 25.0%
!! ATCATAATTTTGCATATGCT+CGG + chr8_3:67444581-67444600 None:intergenic 25.0%
! ATGTCACAGAAAATTAACAT+TGG + chr8_3:67445290-67445309 None:intergenic 25.0%
! AGAAAGAAGACTTAATGTTA+TGG - chr8_3:67445956-67445975 Msa1304180:intron 25.0%
! TTAAAACTTAGACATTACCT+TGG + chr8_3:67446180-67446199 None:intergenic 25.0%
! GTAAATGATATTGCTAACAT+TGG - chr8_3:67446222-67446241 Msa1304180:CDS 25.0%
! ATATATATAAGACACAAACC+TGG + chr8_3:67446334-67446353 None:intergenic 25.0%
! TATATCGTCAACATAATTCA+AGG + chr8_3:67446549-67446568 None:intergenic 25.0%
! GACGATATAGAATCATTATA+TGG - chr8_3:67446560-67446579 Msa1304180:CDS 25.0%
!! CCATGGAAAATATAACTTTT+TGG + chr8_3:67446655-67446674 None:intergenic 25.0%
!! CCAAAAAGTTATATTTTCCA+TGG - chr8_3:67446652-67446671 Msa1304180:CDS 25.0%
! TAATTTCAGAGATATTTCCA+TGG + chr8_3:67446672-67446691 None:intergenic 25.0%
! CATTAATTAAGCTCCATAAA+GGG - chr8_3:67446883-67446902 Msa1304180:CDS 25.0%
! ATTAATTAAGCTCCATAAAG+GGG - chr8_3:67446884-67446903 Msa1304180:CDS 25.0%
!!! TTTTATTTTAGACCCCTTTA+TGG + chr8_3:67446899-67446918 None:intergenic 25.0%
! AAGAAAAACAAGAAATAAGC+TGG + chr8_3:67447174-67447193 None:intergenic 25.0%
!! TATGCTGAGTTAATTTTTGT+TGG - chr8_3:67447230-67447249 Msa1304180:CDS 25.0%
!! TTTCATACTTTTGGTATTTC+TGG + chr8_3:67447364-67447383 None:intergenic 25.0%
!! CAAAAATGGTTTCATACTTT+TGG + chr8_3:67447373-67447392 None:intergenic 25.0%
! GAAATTCATACTATATTGTG+CGG - chr8_3:67447479-67447498 Msa1304180:CDS 25.0%
AAACTCTCAAATCATAACCA+CGG + chr8_3:67444195-67444214 None:intergenic 30.0%
! GGTTATGATTTGAGAGTTTT+TGG - chr8_3:67444196-67444215 Msa1304180:intron 30.0%
CATCATAATGATGAAAGGAA+TGG - chr8_3:67444352-67444371 Msa1304180:intron 30.0%
CATTACCATGATCATAATCT+TGG + chr8_3:67444417-67444436 None:intergenic 30.0%
GAGCATATGCAAAATTATGA+TGG - chr8_3:67444580-67444599 Msa1304180:intron 30.0%
AAAGCATGTTAGATGATGAT+TGG - chr8_3:67445082-67445101 Msa1304180:intron 30.0%
! TGTTCGTCAAAACTTTTATC+AGG + chr8_3:67445228-67445247 None:intergenic 30.0%
AACATAAAAAAGAACAACCG+AGG - chr8_3:67445244-67445263 Msa1304180:intron 30.0%
GTTAATTTCCAACTGTTCTT+TGG - chr8_3:67445312-67445331 Msa1304180:intron 30.0%
TAAGTAAACCAAAGAACAGT+TGG + chr8_3:67445323-67445342 None:intergenic 30.0%
!!! CTTGTTTTTACTTGCTTTTG+TGG - chr8_3:67445555-67445574 Msa1304180:intron 30.0%
ACTGCTTGATCAACTAAAAA+AGG - chr8_3:67445614-67445633 Msa1304180:intron 30.0%
GAATGTTTGATAAATGCGTT+AGG - chr8_3:67445797-67445816 Msa1304180:intron 30.0%
! TTTTCTCCTCTTTTATGTGT+TGG - chr8_3:67445880-67445899 Msa1304180:intron 30.0%
ATGCTTGGAAATAAATGAGA+AGG + chr8_3:67446005-67446024 None:intergenic 30.0%
CAATCTCAAAATTTGATGCT+TGG + chr8_3:67446020-67446039 None:intergenic 30.0%
TAAATTTCACAATGTGGCTT+AGG - chr8_3:67446409-67446428 Msa1304180:CDS 30.0%
!! TTCTCTTTAAAGTGTTAGCA+CGG - chr8_3:67446719-67446738 Msa1304180:CDS 30.0%
GAAAATCAATTGCATGTCAT+TGG + chr8_3:67446762-67446781 None:intergenic 30.0%
CCTTTATGGAGCTTAATTAA+TGG + chr8_3:67446885-67446904 None:intergenic 30.0%
CCATTAATTAAGCTCCATAA+AGG - chr8_3:67446882-67446901 Msa1304180:CDS 30.0%
!!! TTTTTTGCCACCATAATCTA+TGG + chr8_3:67446932-67446951 None:intergenic 30.0%
AGATTATGGTGGCAAAAAAT+TGG - chr8_3:67446933-67446952 Msa1304180:CDS 30.0%
GAAATGCAAAAGTAGCTATT+AGG - chr8_3:67446990-67447009 Msa1304180:CDS 30.0%
! AAGTGAATTCCTTGTTATCA+AGG - chr8_3:67447013-67447032 Msa1304180:CDS 30.0%
! ATTCCTTGTTATCAAGGAAA+TGG - chr8_3:67447019-67447038 Msa1304180:CDS 30.0%
! TTGATTTGACCTTGTGAATA+TGG - chr8_3:67447096-67447115 Msa1304180:intron 30.0%
AAACCAATACCATATTCACA+AGG + chr8_3:67447108-67447127 None:intergenic 30.0%
!! TTGTGAATATGGTATTGGTT+TGG - chr8_3:67447107-67447126 Msa1304180:intron 30.0%
CAAGAAATAAGCTGGATTAT+AGG + chr8_3:67447166-67447185 None:intergenic 30.0%
!!! GTTAATTTTTGTTGGTTTGC+AGG - chr8_3:67447238-67447257 Msa1304180:CDS 30.0%
AAGATGAATCTTACCATACA+TGG + chr8_3:67447448-67447467 None:intergenic 30.0%
TGTATGGTAAGATTCATCTT+TGG - chr8_3:67447448-67447467 Msa1304180:CDS 30.0%
TTGGAAGAGAAAAAGAGTGA+AGG - chr8_3:67443673-67443692 Msa1304180:three_prime_UTR 35.0%
TTGTAACTTTCACAAACCCT+AGG - chr8_3:67444062-67444081 Msa1304180:intron 35.0%
GATGCTATCAACGATATGAA+CGG - chr8_3:67444094-67444113 Msa1304180:intron 35.0%
ATGATGAAAGGAATGGAGAT+TGG - chr8_3:67444359-67444378 Msa1304180:intron 35.0%
TGATGAAAGGAATGGAGATT+GGG - chr8_3:67444360-67444379 Msa1304180:intron 35.0%
! GATCATGGTAATGAGAAAGA+TGG - chr8_3:67444424-67444443 Msa1304180:intron 35.0%
GTAATGAGAAAGATGGATAC+AGG - chr8_3:67444431-67444450 Msa1304180:intron 35.0%
AAAGATGGATACAGGAATAG+AGG - chr8_3:67444439-67444458 Msa1304180:intron 35.0%
GAACACATGCTAGATTATGA+TGG - chr8_3:67444673-67444692 Msa1304180:intron 35.0%
AAAGCATGTTAGATCGTGAT+GGG - chr8_3:67444893-67444912 Msa1304180:intron 35.0%
GATGATGATTGGAATCATGA+CGG - chr8_3:67445093-67445112 Msa1304180:intron 35.0%
AAAATGAACTGGAAAACAGC+AGG - chr8_3:67445127-67445146 Msa1304180:intron 35.0%
AAATGAACTGGAAAACAGCA+GGG - chr8_3:67445128-67445147 Msa1304180:intron 35.0%
ATCCAGACAAAAAGATGGAT+AGG - chr8_3:67445193-67445212 Msa1304180:intron 35.0%
! ATCCTATCCATCTTTTTGTC+TGG + chr8_3:67445198-67445217 None:intergenic 35.0%
ATTCAAACTGCAGGAAAATC+AGG + chr8_3:67445368-67445387 None:intergenic 35.0%
ATTTGTCACATTCAAACTGC+AGG + chr8_3:67445377-67445396 None:intergenic 35.0%
AATAGTCCATCAGATTCCAA+TGG - chr8_3:67445400-67445419 Msa1304180:intron 35.0%
ATAGTCCATCAGATTCCAAT+GGG - chr8_3:67445401-67445420 Msa1304180:intron 35.0%
ATCACATTACCTCATCATTG+TGG + chr8_3:67445429-67445448 None:intergenic 35.0%
! AAATAAACCGAGACTGATTC+TGG - chr8_3:67445521-67445540 Msa1304180:intron 35.0%
AGGTAGAAGATGAATTAGAG+AGG - chr8_3:67445583-67445602 Msa1304180:intron 35.0%
GCTTGATCAACTAAAAAAGG+AGG - chr8_3:67445617-67445636 Msa1304180:intron 35.0%
TCTGAACATGTGCATTTCAA+AGG - chr8_3:67445761-67445780 Msa1304180:intron 35.0%
! TTAAAGATTAGAGCGCTTGT+TGG + chr8_3:67445852-67445871 None:intergenic 35.0%
! CTGAAAAGTGGAATTTTGTC+AGG - chr8_3:67445908-67445927 Msa1304180:CDS 35.0%
! ATTTTGTCAGGTTTCTAAGC+TGG - chr8_3:67445920-67445939 Msa1304180:CDS 35.0%
TGTGTTCAAAGTAAGGATGT+TGG + chr8_3:67446055-67446074 None:intergenic 35.0%
! CAGCTTTTGTGTTCAAAGTA+AGG + chr8_3:67446062-67446081 None:intergenic 35.0%
GAAGATATTTACCGCAGAAA+CGG - chr8_3:67446099-67446118 Msa1304180:CDS 35.0%
AAGATATTTACCGCAGAAAC+GGG - chr8_3:67446100-67446119 Msa1304180:CDS 35.0%
ATATTGCTAACATTGGGCTT+GGG - chr8_3:67446229-67446248 Msa1304180:CDS 35.0%
!!! ACTGGTTTTAAGTCTTTCTG+TGG + chr8_3:67446300-67446319 None:intergenic 35.0%
! GAAAATTCTCTGCAGTTTTG+TGG - chr8_3:67446476-67446495 Msa1304180:CDS 35.0%
!! TCTCTTTAAAGTGTTAGCAC+GGG - chr8_3:67446720-67446739 Msa1304180:CDS 35.0%
CCATAATCTATGGCATAAGA+TGG + chr8_3:67446922-67446941 None:intergenic 35.0%
CCATCTTATGCCATAGATTA+TGG - chr8_3:67446919-67446938 Msa1304180:CDS 35.0%
TCTTATGCCATAGATTATGG+TGG - chr8_3:67446922-67446941 Msa1304180:CDS 35.0%
AGAGATCTTTCAAATCTCAG+GGG + chr8_3:67447058-67447077 None:intergenic 35.0%
CAGAGATCTTTCAAATCTCA+GGG + chr8_3:67447059-67447078 None:intergenic 35.0%
TCAGAGATCTTTCAAATCTC+AGG + chr8_3:67447060-67447079 None:intergenic 35.0%
GAGATTTGAAAGATCTCTGA+TGG - chr8_3:67447060-67447079 Msa1304180:CDS 35.0%
TGACCTTGTGAATATGGTAT+TGG - chr8_3:67447102-67447121 Msa1304180:intron 35.0%
!! CGTATTTACTTAACTTGTGC+TGG - chr8_3:67447202-67447221 Msa1304180:intron 35.0%
TCAATATTGTTCGAGAGTGA+CGG - chr8_3:67447272-67447291 Msa1304180:CDS 35.0%
CTTACAAATGGAAGTCTAGA+TGG - chr8_3:67447320-67447339 Msa1304180:intron 35.0%
GACAACACATGGTACAAAAA+TGG + chr8_3:67447387-67447406 None:intergenic 35.0%
GCAATTAAAGAGACAACACA+TGG + chr8_3:67447398-67447417 None:intergenic 35.0%
TTGTCTCTTTAATTGCCTAG+TGG - chr8_3:67447402-67447421 Msa1304180:intron 35.0%
GTGAGATAGTAAAAACCACT+AGG + chr8_3:67447420-67447439 None:intergenic 35.0%
AAGATTATAGCACTGCTTGT+TGG + chr8_3:67447524-67447543 None:intergenic 35.0%
GGCTGATATGTAGAGAAAAA+AGG - chr8_3:67447604-67447623 Msa1304180:five_prime_UTR 35.0%
ATATGTAGAGAAAAAAGGCC+TGG - chr8_3:67447609-67447628 Msa1304180:five_prime_UTR 35.0%
AGAGTGAAGGAGAAAGACTA+TGG - chr8_3:67443686-67443705 Msa1304180:three_prime_UTR 40.0%
TCAGTTCCACAAAATGACAC+TGG - chr8_3:67443760-67443779 Msa1304180:three_prime_UTR 40.0%
GATGATAGCTCCATTTACGT+TGG - chr8_3:67443785-67443804 Msa1304180:three_prime_UTR 40.0%
AGTGCGAATTGTTTCATCAG+TGG + chr8_3:67443828-67443847 None:intergenic 40.0%
CGCACTGTCTTCAATTTGTA+TGG - chr8_3:67443842-67443861 Msa1304180:three_prime_UTR 40.0%
GACTACCTTGACATCAAGAA+TGG + chr8_3:67443870-67443889 None:intergenic 40.0%
ATCAATGACCAACGTACACT+TGG - chr8_3:67444025-67444044 Msa1304180:CDS 40.0%
TCAATGACCAACGTACACTT+GGG - chr8_3:67444026-67444045 Msa1304180:CDS 40.0%
TAGCATCAATTGCAGACCTA+GGG + chr8_3:67444081-67444100 None:intergenic 40.0%
ATAGCATCAATTGCAGACCT+AGG + chr8_3:67444082-67444101 None:intergenic 40.0%
TGGTAATTATTGTTGTGCCG+TGG - chr8_3:67444175-67444194 Msa1304180:intron 40.0%
GCCGTGTGGTTAAAGTTAAT+GGG - chr8_3:67444254-67444273 Msa1304180:intron 40.0%
CCCCATTAACTTTAACCACA+CGG + chr8_3:67444258-67444277 None:intergenic 40.0%
CCGTGTGGTTAAAGTTAATG+GGG - chr8_3:67444255-67444274 Msa1304180:intron 40.0%
TGGTTAAAGTTAATGGGGTG+AGG - chr8_3:67444260-67444279 Msa1304180:intron 40.0%
! GTGGTGGCAGATCAAATTTT+GGG - chr8_3:67444308-67444327 Msa1304180:intron 40.0%
CGAGACCAAGATTATGATCA+TGG - chr8_3:67444409-67444428 Msa1304180:intron 40.0%
TTCTATCCCTATCCCTATCA+TGG + chr8_3:67444555-67444574 None:intergenic 40.0%
AAAGCATGTTAGTCCGTGAT+AGG - chr8_3:67444614-67444633 Msa1304180:intron 40.0%
CAAGCTAGAGCAAGTATGTT+AGG - chr8_3:67444697-67444716 Msa1304180:intron 40.0%
TTCTATCCCTATCCCTATCA+TGG + chr8_3:67444555-67444574 None:intergenic 40.0%
! CAACTTTTATACCCCTGTCA+CGG + chr8_3:67444840-67444859 None:intergenic 40.0%
! GAAAGCATGTTAGATCGTGA+TGG - chr8_3:67444892-67444911 Msa1304180:intron 40.0%
TTCTACTCCTATCTCTGTCA+CGG + chr8_3:67444927-67444946 None:intergenic 40.0%
AGAAGAGTTGAGCATTTGCA+AGG - chr8_3:67444943-67444962 Msa1304180:intron 40.0%
TATCCCTAACCATGATGTCA+CGG + chr8_3:67445020-67445039 None:intergenic 40.0%
ATTGGAATCATGACGGTGAT+AGG - chr8_3:67445100-67445119 Msa1304180:intron 40.0%
TTGGAATCATGACGGTGATA+GGG - chr8_3:67445101-67445120 Msa1304180:intron 40.0%
TGATAGGGCTGAAAATGAAC+TGG - chr8_3:67445116-67445135 Msa1304180:intron 40.0%
TAAGGACCGTAACTTAGATG+TGG - chr8_3:67445170-67445189 Msa1304180:CDS 40.0%
CTGGATCCACATCTAAGTTA+CGG + chr8_3:67445179-67445198 None:intergenic 40.0%
TGTGGATCCAGACAAAAAGA+TGG - chr8_3:67445188-67445207 Msa1304180:CDS 40.0%
TCTTACTCGATGTTTCTCCT+CGG + chr8_3:67445264-67445283 None:intergenic 40.0%
TAGTCCATCAGATTCCAATG+GGG - chr8_3:67445402-67445421 Msa1304180:intron 40.0%
AAATGTGCCAGAATCAGTCT+CGG + chr8_3:67445531-67445550 None:intergenic 40.0%
!! TACTTGCTTTTGTGGTCTTC+AGG - chr8_3:67445563-67445582 Msa1304180:intron 40.0%
! TCTCCTCTTTTATGTGTTGG+TGG - chr8_3:67445883-67445902 Msa1304180:intron 40.0%
!! GGAGTTACAAAAGCACTCTA+AGG - chr8_3:67445977-67445996 Msa1304180:intron 40.0%
GATATTGCTAACATTGGGCT+TGG - chr8_3:67446228-67446247 Msa1304180:CDS 40.0%
AGAAAACATTCATGCAGCTG+AGG + chr8_3:67446263-67446282 None:intergenic 40.0%
AACCAGTGAAAAAGAACTCC+AGG - chr8_3:67446313-67446332 Msa1304180:CDS 40.0%
!! AACCTGGAGTTCTTTTTCAC+TGG + chr8_3:67446318-67446337 None:intergenic 40.0%
TATATGGTGCAGTTGTATGC+AGG - chr8_3:67446576-67446595 Msa1304180:CDS 40.0%
! GCACGGGTATTTGTATTTTG+AGG - chr8_3:67446736-67446755 Msa1304180:CDS 40.0%
ACTTATGCGCGAAGTTGTAA+TGG - chr8_3:67446968-67446987 Msa1304180:CDS 40.0%
! CAGCCATTTCCTTGATAACA+AGG + chr8_3:67447025-67447044 None:intergenic 40.0%
GGTCTTGGACAACTTACAAA+TGG - chr8_3:67447308-67447327 Msa1304180:intron 40.0%
TATCTCACTAGCTCCATGTA+TGG - chr8_3:67447432-67447451 Msa1304180:intron 40.0%
TTAGCATATGGCATCTTACC+TGG - chr8_3:67447582-67447601 Msa1304180:five_prime_UTR 40.0%
TAGCATATGGCATCTTACCT+GGG - chr8_3:67447583-67447602 Msa1304180:five_prime_UTR 40.0%
! TTTTCTCTACATATCAGCCC+AGG + chr8_3:67447603-67447622 None:intergenic 40.0%
!!! CATCGTCCAGTGTCATTTTG+TGG + chr8_3:67443769-67443788 None:intergenic 45.0%
GATAGCTCCATTTACGTTGG+TGG - chr8_3:67443788-67443807 Msa1304180:three_prime_UTR 45.0%
AGCATTTCCCAAGTGTACGT+TGG + chr8_3:67444036-67444055 None:intergenic 45.0%
TCAGACTATTAATGGCCGTG+TGG - chr8_3:67444240-67444259 Msa1304180:intron 45.0%
GGCCGTGTGGTTAAAGTTAA+TGG - chr8_3:67444253-67444272 Msa1304180:intron 45.0%
!! GGTGGTGGCAGATCAAATTT+TGG - chr8_3:67444307-67444326 Msa1304180:intron 45.0%
ACAGGAATAGAGGCAGTGAT+TGG - chr8_3:67444449-67444468 Msa1304180:intron 45.0%
ATAGGTCTCGAGACCATGAT+AGG - chr8_3:67444539-67444558 Msa1304180:intron 45.0%
TAGGTCTCGAGACCATGATA+GGG - chr8_3:67444540-67444559 Msa1304180:intron 45.0%
TCGAGACCATGATAGGGATA+GGG - chr8_3:67444546-67444565 Msa1304180:intron 45.0%
TTCTATCCCTATCCCTGTCA+CGG + chr8_3:67444648-67444667 None:intergenic 45.0%
ATAGATCCCGAGACCATGAT+AGG - chr8_3:67444725-67444744 Msa1304180:intron 45.0%
TAGATCCCGAGACCATGATA+GGG - chr8_3:67444726-67444745 Msa1304180:intron 45.0%
AAAGCATGTTAGACCGCGAT+GGG - chr8_3:67444986-67445005 Msa1304180:intron 45.0%
TAACCATGATGTCACGGTCT+CGG + chr8_3:67445014-67445033 None:intergenic 45.0%
AGACCGTGACATCATGGTTA+GGG - chr8_3:67445014-67445033 Msa1304180:CDS 45.0%
GCACCACCAACACATAAAAG+AGG + chr8_3:67445889-67445908 None:intergenic 45.0%
TCAGGTTTCTAAGCTGGAAG+AGG - chr8_3:67445926-67445945 Msa1304180:CDS 45.0%
CAGGTTTCTAAGCTGGAAGA+GGG - chr8_3:67445927-67445946 Msa1304180:CDS 45.0%
TTCTAAGCTGGAAGAGGGAT+TGG - chr8_3:67445932-67445951 Msa1304180:intron 45.0%
ATATTTACCGCAGAAACGGG+AGG - chr8_3:67446103-67446122 Msa1304180:CDS 45.0%
TTACCTTGGTCAACTGCATC+TGG + chr8_3:67446166-67446185 None:intergenic 45.0%
!! TAAAAAAAAATACAATAATA+TGG + chr8_3:67444136-67444155 None:intergenic 5.0%
!! AAAGTAAAATTAATAATAAA+TGG + chr8_3:67446510-67446529 None:intergenic 5.0%
GGGAAGACCACCAACGTAAA+TGG + chr8_3:67443798-67443817 None:intergenic 50.0%
! GTTTCATCAGTGGCGTCGAA+GGG + chr8_3:67443818-67443837 None:intergenic 50.0%
! TGTTTCATCAGTGGCGTCGA+AGG + chr8_3:67443819-67443838 None:intergenic 50.0%
TGGCGCCATTCTTGATGTCA+AGG - chr8_3:67443862-67443881 Msa1304180:three_prime_UTR 50.0%
AGGAATGGAGATTGGGATCG+TGG - chr8_3:67444367-67444386 Msa1304180:intron 50.0%
AATGGAGATTGGGATCGTGG+CGG - chr8_3:67444370-67444389 Msa1304180:intron 50.0%
ATTGGACCAGAGGTGGTGAT+TGG - chr8_3:67444467-67444486 Msa1304180:intron 50.0%
ATTGGACTCGACAGCATCAG+AGG - chr8_3:67444485-67444504 Msa1304180:intron 50.0%
CATGGTCTCGAGACCTATCA+CGG + chr8_3:67444537-67444556 None:intergenic 50.0%
CTCGAGACCATGATAGGGAT+AGG - chr8_3:67444545-67444564 Msa1304180:intron 50.0%
CCTATCCCTATCATGGTCTC+GGG + chr8_3:67444548-67444567 None:intergenic 50.0%
CCCTATCCCTATCATGGTCT+CGG + chr8_3:67444549-67444568 None:intergenic 50.0%
CCGAGACCATGATAGGGATA+GGG - chr8_3:67444732-67444751 Msa1304180:intron 50.0%
AAAGCGCGTTAGACCGTGAT+AGG - chr8_3:67444800-67444819 Msa1304180:intron 50.0%
TTATACCCCTGTCACGGTCA+CGG + chr8_3:67444834-67444853 None:intergenic 50.0%
TCCTATCTCTGTCACGGTCT+CGG + chr8_3:67444921-67444940 None:intergenic 50.0%
! GAAAGCATGTTAGACCGCGA+TGG - chr8_3:67444985-67445004 Msa1304180:intron 50.0%
AACCATGATGTCACGGTCTC+GGG + chr8_3:67445013-67445032 None:intergenic 50.0%
GAGACCGTGACATCATGGTT+AGG - chr8_3:67445013-67445032 Msa1304180:CDS 50.0%
ACTGGAAAACAGCAGGGTAC+AGG - chr8_3:67445134-67445153 Msa1304180:intron 50.0%
CTGGAAAACAGCAGGGTACA+GGG - chr8_3:67445135-67445154 Msa1304180:intron 50.0%
ACAGGGTGGAGATGTGGATA+AGG - chr8_3:67445152-67445171 Msa1304180:CDS 50.0%
TGGTCCCCATTGGAATCTGA+TGG + chr8_3:67445409-67445428 None:intergenic 50.0%
CTCATCATTGTGGTCCCCAT+TGG + chr8_3:67445419-67445438 None:intergenic 50.0%
CAATGGGGACCACAATGATG+AGG - chr8_3:67445417-67445436 Msa1304180:intron 50.0%
! ATGGCGATGTCTGCTCTAGA+AGG - chr8_3:67445690-67445709 Msa1304180:CDS 50.0%
!! GTGTTGGTGGTGCTGAAAAG+TGG - chr8_3:67445896-67445915 Msa1304180:CDS 50.0%
TTGTTCGAGAGTGACGGTGA+TGG - chr8_3:67447278-67447297 Msa1304180:CDS 50.0%
GTTAATGGGGTGAGGTCTCG+TGG - chr8_3:67444268-67444287 Msa1304180:intron 55.0%
AGAGGCAGTGATTGGACCAG+AGG - chr8_3:67444457-67444476 Msa1304180:intron 55.0%
TCGAGTCCAATCACCACCTC+TGG + chr8_3:67444476-67444495 None:intergenic 55.0%
AGAGGTCTCGAGACCGTGAT+AGG - chr8_3:67444503-67444522 Msa1304180:intron 55.0%
CCCGAGACCATGATAGGGAT+AGG - chr8_3:67444731-67444750 Msa1304180:intron 55.0%
CCTATCTCTGTCACGGTCTC+GGG + chr8_3:67444920-67444939 None:intergenic 55.0%
GAAAACAGCAGGGTACAGGG+TGG - chr8_3:67445138-67445157 Msa1304180:intron 55.0%
ACAGCATCCTCCCGTTTCTG+CGG + chr8_3:67446113-67446132 None:intergenic 55.0%
TCGCCAGATGCAGTTGACCA+AGG - chr8_3:67446160-67446179 Msa1304180:CDS 55.0%
! GAGAGTGACGGTGATGGTGA+TGG - chr8_3:67447284-67447303 Msa1304180:CDS 55.0%
!! AGTGACGGTGATGGTGATGG+TGG - chr8_3:67447287-67447306 Msa1304180:intron 55.0%
!! GGTGATGGTGATGGTGGTCT+TGG - chr8_3:67447293-67447312 Msa1304180:intron 55.0%
AATGGGGTGAGGTCTCGTGG+CGG - chr8_3:67444271-67444290 Msa1304180:intron 60.0%
GGCAGTGATTGGACCAGAGG+TGG - chr8_3:67444460-67444479 Msa1304180:intron 60.0%
ATAGGTCCCGCGACCGTGAT+AGG - chr8_3:67444521-67444540 Msa1304180:intron 60.0%
TCGAGACCTATCACGGTCGC+GGG + chr8_3:67444530-67444549 None:intergenic 60.0%
CTCGAGACCTATCACGGTCG+CGG + chr8_3:67444531-67444550 None:intergenic 60.0%
CACGGTCTCGGGACCTATCA+CGG + chr8_3:67444630-67444649 None:intergenic 60.0%
ATAGGTCCCGAGACCGTGAC+AGG - chr8_3:67444632-67444651 Msa1304180:intron 60.0%
TAGGTCCCGAGACCGTGACA+GGG - chr8_3:67444633-67444652 Msa1304180:intron 60.0%
CCTATCCCTGTCACGGTCTC+GGG + chr8_3:67444641-67444660 None:intergenic 60.0%
CCCTATCCCTGTCACGGTCT+CGG + chr8_3:67444642-67444661 None:intergenic 60.0%
CCGAGACCGTGACAGGGATA+GGG - chr8_3:67444639-67444658 Msa1304180:intron 60.0%
CACGGTCTCGGGACCTATCA+CGG + chr8_3:67444630-67444649 None:intergenic 60.0%
CCCGAGACCGTGACAGAGAT+AGG - chr8_3:67444917-67444936 Msa1304180:intron 60.0%
GTCCCGAGACCGTGACATCA+TGG - chr8_3:67445008-67445027 Msa1304180:CDS 60.0%
CAGGGTACAGGGTGGAGATG+TGG - chr8_3:67445146-67445165 Msa1304180:CDS 60.0%
CACGGTCGCGGGACCTATCA+CGG + chr8_3:67444519-67444538 None:intergenic 65.0%
CCCGAGACCGTGACAGGGAT+AGG - chr8_3:67444638-67444657 Msa1304180:intron 65.0%
CCTGTCACGGTCACGGTCTC+GGG + chr8_3:67444827-67444846 None:intergenic 65.0%
CCCTGTCACGGTCACGGTCT+CGG + chr8_3:67444828-67444847 None:intergenic 65.0%
CCGAGACCGTGACCGTGACA+GGG - chr8_3:67444825-67444844 Msa1304180:intron 65.0%
CGAGACCGTGACCGTGACAG+GGG - chr8_3:67444826-67444845 Msa1304180:intron 65.0%
GTGAGGTCTCGTGGCGGTGG+AGG - chr8_3:67444277-67444296 Msa1304180:intron 70.0%
AGGTCTCGTGGCGGTGGAGG+TGG - chr8_3:67444280-67444299 Msa1304180:intron 70.0%
TCTCGTGGCGGTGGAGGTGG+CGG - chr8_3:67444283-67444302 Msa1304180:intron 70.0%
CCCGAGACCGTGACCGTGAC+AGG - chr8_3:67444824-67444843 Msa1304180:intron 70.0%
CACGGTCTCGGGACCCATCG+CGG + chr8_3:67445002-67445021 None:intergenic 70.0%
GGGGTGAGGTCTCGTGGCGG+TGG - chr8_3:67444274-67444293 Msa1304180:intron 75.0%
! GGTGGAGGTGGCGGTGGTGG+TGG - chr8_3:67444292-67444311 Msa1304180:intron 75.0%
!! CGTGGCGGTGGAGGTGGCGG+TGG - chr8_3:67444286-67444305 Msa1304180:intron 80.0%
!! GGCGGTGGAGGTGGCGGTGG+TGG - chr8_3:67444289-67444308 Msa1304180:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 67443667 67447660 67443667 ID=Msa1304180;Name=Msa1304180
chr8_3 mRNA 67443667 67447660 67443667 ID=Msa1304180-mRNA-1;Parent=Msa1304180;Name=Msa1304180-mRNA-1;_AED=0.11;_eAED=0.11;_QI=106|1|0.88|1|1|1|9|311|549
chr8_3 exon 67443667 67444067 67443667 ID=Msa1304180-mRNA-1:exon:20710;Parent=Msa1304180-mRNA-1
chr8_3 exon 67444993 67445061 67444993 ID=Msa1304180-mRNA-1:exon:20709;Parent=Msa1304180-mRNA-1
chr8_3 exon 67445146 67445211 67445146 ID=Msa1304180-mRNA-1:exon:20708;Parent=Msa1304180-mRNA-1
chr8_3 exon 67445329 67445397 67445329 ID=Msa1304180-mRNA-1:exon:20707;Parent=Msa1304180-mRNA-1
chr8_3 exon 67445689 67445742 67445689 ID=Msa1304180-mRNA-1:exon:20706;Parent=Msa1304180-mRNA-1
chr8_3 exon 67445889 67445946 67445889 ID=Msa1304180-mRNA-1:exon:20705;Parent=Msa1304180-mRNA-1
chr8_3 exon 67446050 67447083 67446050 ID=Msa1304180-mRNA-1:exon:20704;Parent=Msa1304180-mRNA-1
chr8_3 exon 67447207 67447305 67447207 ID=Msa1304180-mRNA-1:exon:20703;Parent=Msa1304180-mRNA-1
chr8_3 exon 67447444 67447660 67447444 ID=Msa1304180-mRNA-1:exon:20702;Parent=Msa1304180-mRNA-1
chr8_3 five_prime_UTR 67447555 67447660 67447555 ID=Msa1304180-mRNA-1:five_prime_utr;Parent=Msa1304180-mRNA-1
chr8_3 CDS 67447444 67447554 67447444 ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1
chr8_3 CDS 67447207 67447305 67447207 ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1
chr8_3 CDS 67446050 67447083 67446050 ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1
chr8_3 CDS 67445889 67445946 67445889 ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1
chr8_3 CDS 67445689 67445742 67445689 ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1
chr8_3 CDS 67445329 67445397 67445329 ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1
chr8_3 CDS 67445146 67445211 67445146 ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1
chr8_3 CDS 67444993 67445061 67444993 ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1
chr8_3 CDS 67443978 67444067 67443978 ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1
chr8_3 three_prime_UTR 67443667 67443977 67443667 ID=Msa1304180-mRNA-1:three_prime_utr;Parent=Msa1304180-mRNA-1
Gene Sequence

>Msa1304180

ATGACACTGGACGATGATAGCTCCATTTACGTTGGTGGTCTTCCCTTCGACGCCACTGATGAAACAATTCGCACTGTCTTCAATTTGTATGGCGCCATTCTTGATGTCAAGATTATCAATGACCAACGTACACTTGGGAAATGCTATTGTTTTGTAACTTTCACAAACCCTAGGTCTGCAATTGATGCTATCAACGATATGAACGGAAGAACTATTAATGGCCGTGTGGTTAAAGTTAATGGGGTGAGGTCTCGTGGCGGTGGAGGTGGCGGTGGTGGTGGCAGATCAAATTTTGGGAGAGAAAGAGAACGTTATTATCATCATAATGATGAAAGGAATGGAGATTGGGATCGTGGCGGCAGAGATCGAGAGATTCGAGACCAAGATTATGATCATGGTAATGAGAAAGATGGATACAGGAATAGAGGCAGTGATTGGACCAGAGGTGGTGATTGGACTCGACAGCATCAGAGGTCTCGAGACCGTGATAGGTCCCGCGACCGTGATAGGTCTCGAGACCATGATAGGGATAGGGATAGAAGAGCCGAGCATATGCAAAATTATGATGGTCTAGCTAGAGAAAGCATGTTAGTCCGTGATAGGTCCCGAGACCGTGACAGGGATAGGGATAGAAGAGTTGAACACATGCTAGATTATGATGGTCAAGCTAGAGCAAGTATGTTAGGTCGTGATAGATCCCGAGACCATGATAGGGATAGGGATAGAAGAGTTGAACATATGCAAGATTATGATGATCAAGCTAGAGAAAGCGCGTTAGACCGTGATAGGTCCCGAGACCGTGACCGTGACAGGGGTATAAAAGTTGAGCATTTGCAAGATTATGACGATCAAGCTAGAGAAAGCATGTTAGATCGTGATGGGTCCCGAGACCGTGACAGAGATAGGAGTAGAAGAGTTGAGCATTTGCAAGGTTATGATGATCAAGCTAGAGAAAGCATGTTAGACCGCGATGGGTCCCGAGACCGTGACATCATGGTTAGGGATAGAAGAGTTGAACATTTGCAAGATTATGATGATCAACATAGAGAAAGCATGTTAGATGATGATTGGAATCATGACGGTGATAGGGCTGAAAATGAACTGGAAAACAGCAGGGTACAGGGTGGAGATGTGGATAAGGACCGTAACTTAGATGTGGATCCAGACAAAAAGATGGATAGGATTAGTGATCCTGATAAAAGTTTTGACGAACATAAAAAAGAACAACCGAGGAGAAACATCGATTTGAATGTGACAAATCAAAATAGTCCATCAGATTCCAATGGGGACCACAATGATGAGGTAGAAGATGAATTAGAGAGGTCAATTCAACTGCTTGATCAACTAAAAAAGGAGGTTTCTAAGCTGGAAGAGGGATTGGAAGAAAGAAGACTTAATGTTATGGAGTTACAAAAGCACTCTAAGAAACGGGAGGATGCTGTGATTACTGCAAAGAAAAAATCTTTATATCGCCAGATGCAGTTGACCAAGCTGCATGAATGTTTTCTGCAAGTGCACGATTCCACAGAAAGACTTAAAACCAGTGAAAAAGAACTCCAGGCTCTAGTTGAATCAATATTGTTCGAGAGTGACGGTGATGGTGATGGTGGTCTTGGACAACTTACAAATGGAAGTCTAGATGGTAGATAG

Protein sequence

>Msa1304180

MTLDDDSSIYVGGLPFDATDETIRTVFNLYGAILDVKIINDQRTLGKCYCFVTFTNPRSAIDAINDMNGRTINGRVVKVNGVRSRGGGGGGGGGRSNFGRERERYYHHNDERNGDWDRGGRDREIRDQDYDHGNEKDGYRNRGSDWTRGGDWTRQHQRSRDRDRSRDRDRSRDHDRDRDRRAEHMQNYDGLARESMLVRDRSRDRDRDRDRRVEHMLDYDGQARASMLGRDRSRDHDRDRDRRVEHMQDYDDQARESALDRDRSRDRDRDRGIKVEHLQDYDDQARESMLDRDGSRDRDRDRSRRVEHLQGYDDQARESMLDRDGSRDRDIMVRDRRVEHLQDYDDQHRESMLDDDWNHDGDRAENELENSRVQGGDVDKDRNLDVDPDKKMDRISDPDKSFDEHKKEQPRRNIDLNVTNQNSPSDSNGDHNDEVEDELERSIQLLDQLKKEVSKLEEGLEERRLNVMELQKHSKKREDAVITAKKKSLYRQMQLTKLHECFLQVHDSTERLKTSEKELQALVESILFESDGDGDGGLGQLTNGSLDGR*