Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304180 | XP_003609209.3 | 93.772 | 562 | 15 | 4 | 1 | 549 | 1 | 555 | 0.0 | 854 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304180 | sp|Q28IQ9|CIRBP_XENTR | 38.158 | 76 | 46 | 1 | 5 | 79 | 4 | 79 | 3.49e-12 | 68.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304180 | A0A396IE54 | 93.772 | 562 | 15 | 4 | 1 | 549 | 1 | 555 | 0.0 | 854 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006700 | Msa1304180 | 0.812347 | 4.437911e-51 | -8.615850e-47 |
Msa0012470 | Msa1304180 | 0.810923 | 9.053803e-51 | -8.615850e-47 |
Msa0020630 | Msa1304180 | 0.839626 | 1.416316e-57 | -8.615850e-47 |
Msa0027540 | Msa1304180 | 0.854680 | 1.047728e-61 | -8.615850e-47 |
Msa0032120 | Msa1304180 | 0.834797 | 2.434426e-56 | -8.615850e-47 |
Msa0032400 | Msa1304180 | 0.820460 | 6.781085e-53 | -8.615850e-47 |
Msa0038350 | Msa1304180 | -0.857517 | 1.547053e-62 | -8.615850e-47 |
Msa0044710 | Msa1304180 | 0.827955 | 1.175437e-54 | -8.615850e-47 |
Msa0046660 | Msa1304180 | -0.809740 | 1.629298e-50 | -8.615850e-47 |
Msa0050720 | Msa1304180 | 0.829723 | 4.388235e-55 | -8.615850e-47 |
Msa0050770 | Msa1304180 | 0.836247 | 1.046406e-56 | -8.615850e-47 |
Msa0054640 | Msa1304180 | 0.802799 | 4.726328e-49 | -8.615850e-47 |
Msa0055280 | Msa1304180 | 0.800381 | 1.480115e-48 | -8.615850e-47 |
Msa0068410 | Msa1304180 | 0.813668 | 2.278208e-51 | -8.615850e-47 |
Msa0073820 | Msa1304180 | 0.814188 | 1.749451e-51 | -8.615850e-47 |
Msa0075310 | Msa1304180 | 0.849981 | 2.280102e-60 | -8.615850e-47 |
Msa0079650 | Msa1304180 | 0.805359 | 1.386511e-49 | -8.615850e-47 |
Msa0084680 | Msa1304180 | 0.812913 | 3.337906e-51 | -8.615850e-47 |
Msa0091770 | Msa1304180 | 0.844411 | 7.686125e-59 | -8.615850e-47 |
Msa0094100 | Msa1304180 | 0.825933 | 3.577715e-54 | -8.615850e-47 |
Msa0101060 | Msa1304180 | 0.806437 | 8.230586e-50 | -8.615850e-47 |
Msa0111310 | Msa1304180 | 0.805226 | 1.478661e-49 | -8.615850e-47 |
Msa0114250 | Msa1304180 | 0.809102 | 2.234034e-50 | -8.615850e-47 |
Msa0119850 | Msa1304180 | 0.813938 | 1.986315e-51 | -8.615850e-47 |
Msa0605620 | Msa1304180 | 0.811634 | 6.348126e-51 | -8.615850e-47 |
Msa0610620 | Msa1304180 | 0.801187 | 1.013593e-48 | -8.615850e-47 |
Msa0618010 | Msa1304180 | 0.802847 | 4.620300e-49 | -8.615850e-47 |
Msa0620640 | Msa1304180 | 0.817392 | 3.376413e-52 | -8.615850e-47 |
Msa0621120 | Msa1304180 | 0.825274 | 5.125911e-54 | -8.615850e-47 |
Msa0621590 | Msa1304180 | 0.801924 | 7.158356e-49 | -8.615850e-47 |
Msa0621890 | Msa1304180 | 0.809897 | 1.507995e-50 | -8.615850e-47 |
Msa0624730 | Msa1304180 | 0.802616 | 5.154874e-49 | -8.615850e-47 |
Msa0626230 | Msa1304180 | 0.801230 | 9.930551e-49 | -8.615850e-47 |
Msa0629370 | Msa1304180 | 0.801627 | 8.234796e-49 | -8.615850e-47 |
Msa0630990 | Msa1304180 | 0.818340 | 2.062960e-52 | -8.615850e-47 |
Msa0638280 | Msa1304180 | 0.836918 | 7.060939e-57 | -8.615850e-47 |
Msa0638320 | Msa1304180 | 0.830648 | 2.608484e-55 | -8.615850e-47 |
Msa0657050 | Msa1304180 | 0.830706 | 2.525487e-55 | -8.615850e-47 |
Msa0657670 | Msa1304180 | 0.843878 | 1.068623e-58 | -8.615850e-47 |
Msa0660880 | Msa1304180 | -0.803628 | 3.184254e-49 | -8.615850e-47 |
Msa0677270 | Msa1304180 | 0.827336 | 1.654658e-54 | -8.615850e-47 |
Msa0677820 | Msa1304180 | 0.806497 | 7.994035e-50 | -8.615850e-47 |
Msa0686850 | Msa1304180 | 0.804705 | 1.900014e-49 | -8.615850e-47 |
Msa0697140 | Msa1304180 | 0.815326 | 9.789976e-52 | -8.615850e-47 |
Msa0697540 | Msa1304180 | 0.808953 | 2.403553e-50 | -8.615850e-47 |
Msa0701030 | Msa1304180 | 0.822379 | 2.444340e-53 | -8.615850e-47 |
Msa0707780 | Msa1304180 | 0.806420 | 8.298428e-50 | -8.615850e-47 |
Msa0708230 | Msa1304180 | 0.805707 | 1.172212e-49 | -8.615850e-47 |
Msa0714600 | Msa1304180 | 0.837448 | 5.167457e-57 | -8.615850e-47 |
Msa0715310 | Msa1304180 | 0.817143 | 3.842907e-52 | -8.615850e-47 |
Msa0722930 | Msa1304180 | 0.847248 | 1.304265e-59 | -8.615850e-47 |
Msa0723140 | Msa1304180 | 0.844068 | 9.502742e-59 | -8.615850e-47 |
Msa0728280 | Msa1304180 | 0.816705 | 4.819567e-52 | -8.615850e-47 |
Msa0728380 | Msa1304180 | 0.810750 | 9.869797e-51 | -8.615850e-47 |
Msa0728540 | Msa1304180 | 0.810390 | 1.180694e-50 | -8.615850e-47 |
Msa0730180 | Msa1304180 | 0.800026 | 1.747894e-48 | -8.615850e-47 |
Msa0734660 | Msa1304180 | 0.806517 | 7.917317e-50 | -8.615850e-47 |
Msa0743650 | Msa1304180 | 0.822748 | 2.006666e-53 | -8.615850e-47 |
Msa0748610 | Msa1304180 | 0.811587 | 6.497514e-51 | -8.615850e-47 |
Msa0750380 | Msa1304180 | 0.821199 | 4.584246e-53 | -8.615850e-47 |
Msa0757180 | Msa1304180 | 0.812511 | 4.086683e-51 | -8.615850e-47 |
Msa0760890 | Msa1304180 | 0.810568 | 1.080574e-50 | -8.615850e-47 |
Msa0768490 | Msa1304180 | 0.804283 | 2.326731e-49 | -8.615850e-47 |
Msa0769390 | Msa1304180 | 0.807656 | 4.544339e-50 | -8.615850e-47 |
Msa0773610 | Msa1304180 | 0.837695 | 4.466328e-57 | -8.615850e-47 |
Msa0776480 | Msa1304180 | 0.821647 | 3.613359e-53 | -8.615850e-47 |
Msa0779240 | Msa1304180 | 0.804120 | 2.516348e-49 | -8.615850e-47 |
Msa0783340 | Msa1304180 | 0.823612 | 1.261322e-53 | -8.615850e-47 |
Msa0788360 | Msa1304180 | 0.820823 | 5.596534e-53 | -8.615850e-47 |
Msa0789570 | Msa1304180 | 0.806496 | 7.998419e-50 | -8.615850e-47 |
Msa0791070 | Msa1304180 | 0.800628 | 1.318512e-48 | -8.615850e-47 |
Msa0792510 | Msa1304180 | 0.847914 | 8.550945e-60 | -8.615850e-47 |
Msa0795920 | Msa1304180 | 0.801971 | 7.001001e-49 | -8.615850e-47 |
Msa0801020 | Msa1304180 | 0.819509 | 1.119055e-52 | -8.615850e-47 |
Msa0813320 | Msa1304180 | -0.803213 | 3.880353e-49 | -8.615850e-47 |
Msa0816640 | Msa1304180 | 0.803114 | 4.067680e-49 | -8.615850e-47 |
Msa0826650 | Msa1304180 | 0.819337 | 1.224567e-52 | -8.615850e-47 |
Msa0828570 | Msa1304180 | 0.843052 | 1.776203e-58 | -8.615850e-47 |
Msa0830720 | Msa1304180 | 0.811376 | 7.221158e-51 | -8.615850e-47 |
Msa0832370 | Msa1304180 | 0.815807 | 7.650767e-52 | -8.615850e-47 |
Msa0837990 | Msa1304180 | 0.814102 | 1.828221e-51 | -8.615850e-47 |
Msa0123170 | Msa1304180 | 0.809080 | 2.258429e-50 | -8.615850e-47 |
Msa0144330 | Msa1304180 | 0.817678 | 2.910844e-52 | -8.615850e-47 |
Msa0149500 | Msa1304180 | 0.823515 | 1.329057e-53 | -8.615850e-47 |
Msa0152370 | Msa1304180 | 0.813069 | 3.084298e-51 | -8.615850e-47 |
Msa0153430 | Msa1304180 | 0.803130 | 4.037392e-49 | -8.615850e-47 |
Msa0153440 | Msa1304180 | 0.808108 | 3.640752e-50 | -8.615850e-47 |
Msa0159750 | Msa1304180 | 0.838061 | 3.595757e-57 | -8.615850e-47 |
Msa0168100 | Msa1304180 | 0.859126 | 5.130130e-63 | -8.615850e-47 |
Msa0170580 | Msa1304180 | 0.800289 | 1.545184e-48 | -8.615850e-47 |
Msa0181410 | Msa1304180 | 0.812577 | 3.953674e-51 | -8.615850e-47 |
Msa0182930 | Msa1304180 | 0.837579 | 4.783092e-57 | -8.615850e-47 |
Msa0183610 | Msa1304180 | 0.828327 | 9.562820e-55 | -8.615850e-47 |
Msa0185480 | Msa1304180 | 0.802832 | 4.651523e-49 | -8.615850e-47 |
Msa0185640 | Msa1304180 | -0.854831 | 9.471926e-62 | -8.615850e-47 |
Msa0185700 | Msa1304180 | 0.828060 | 1.109003e-54 | -8.615850e-47 |
Msa0194570 | Msa1304180 | 0.801180 | 1.016605e-48 | -8.615850e-47 |
Msa0198440 | Msa1304180 | 0.814407 | 1.565383e-51 | -8.615850e-47 |
Msa0200950 | Msa1304180 | -0.834561 | 2.792184e-56 | -8.615850e-47 |
Msa0201330 | Msa1304180 | 0.805064 | 1.598598e-49 | -8.615850e-47 |
Msa0207000 | Msa1304180 | 0.849118 | 3.969949e-60 | -8.615850e-47 |
Msa0208390 | Msa1304180 | 0.830514 | 2.813835e-55 | -8.615850e-47 |
Msa0208630 | Msa1304180 | 0.811341 | 7.347623e-51 | -8.615850e-47 |
Msa0225000 | Msa1304180 | 0.823213 | 1.562941e-53 | -8.615850e-47 |
Msa1228210 | Msa1304180 | 0.821838 | 3.263802e-53 | -8.615850e-47 |
Msa1229660 | Msa1304180 | 0.822395 | 2.424476e-53 | -8.615850e-47 |
Msa1229690 | Msa1304180 | 0.809700 | 1.662130e-50 | -8.615850e-47 |
Msa1254950 | Msa1304180 | 0.810003 | 1.430367e-50 | -8.615850e-47 |
Msa1256540 | Msa1304180 | -0.855219 | 7.304342e-62 | -8.615850e-47 |
Msa1258280 | Msa1304180 | 0.819458 | 1.149528e-52 | -8.615850e-47 |
Msa1261470 | Msa1304180 | 0.997629 | 4.526698e-246 | -8.615850e-47 |
Msa1262310 | Msa1304180 | 0.810409 | 1.169660e-50 | -8.615850e-47 |
Msa1265960 | Msa1304180 | 0.829429 | 5.174588e-55 | -8.615850e-47 |
Msa1271280 | Msa1304180 | 0.827833 | 1.257201e-54 | -8.615850e-47 |
Msa1271300 | Msa1304180 | 0.806538 | 7.834718e-50 | -8.615850e-47 |
Msa1280120 | Msa1304180 | 0.815090 | 1.104641e-51 | -8.615850e-47 |
Msa1280130 | Msa1304180 | 0.809813 | 1.571952e-50 | -8.615850e-47 |
Msa1284140 | Msa1304180 | 0.800714 | 1.265963e-48 | -8.615850e-47 |
Msa1284220 | Msa1304180 | 0.801065 | 1.073609e-48 | -8.615850e-47 |
Msa1288170 | Msa1304180 | 0.802958 | 4.380931e-49 | -8.615850e-47 |
Msa1288320 | Msa1304180 | -0.800148 | 1.650745e-48 | -8.615850e-47 |
Msa1295690 | Msa1304180 | 0.804265 | 2.347026e-49 | -8.615850e-47 |
Msa1296960 | Msa1304180 | -0.851321 | 9.574851e-61 | -8.615850e-47 |
Msa1297090 | Msa1304180 | 0.852310 | 5.019688e-61 | -8.615850e-47 |
Msa1298290 | Msa1304180 | 0.815793 | 7.706727e-52 | -8.615850e-47 |
Msa1304180 | Msa1308480 | 0.805691 | 1.181045e-49 | -8.615850e-47 |
Msa1304180 | Msa1310110 | 0.831524 | 1.589616e-55 | -8.615850e-47 |
Msa1304180 | Msa1317030 | 0.814274 | 1.674354e-51 | -8.615850e-47 |
Msa1304180 | Msa1323190 | 0.811847 | 5.704068e-51 | -8.615850e-47 |
Msa1304180 | Msa1328850 | 0.853901 | 1.759063e-61 | -8.615850e-47 |
Msa1304180 | Msa1329990 | 0.818295 | 2.111595e-52 | -8.615850e-47 |
Msa1304180 | Msa1335860 | 0.817138 | 3.851227e-52 | -8.615850e-47 |
Msa1304180 | Msa1335970 | -0.802576 | 5.254483e-49 | -8.615850e-47 |
Msa1304180 | Msa1336470 | 0.826619 | 2.455819e-54 | -8.615850e-47 |
Msa1304180 | Msa1342430 | 0.819929 | 8.969114e-53 | -8.615850e-47 |
Msa1304180 | Msa1347290 | 0.828323 | 9.585310e-55 | -8.615850e-47 |
Msa1304180 | Msa1347620 | 0.821426 | 4.063608e-53 | -8.615850e-47 |
Msa1304180 | Msa1358870 | -0.821829 | 3.279570e-53 | -8.615850e-47 |
Msa1304180 | Msa1358960 | 0.841121 | 5.757443e-58 | -8.615850e-47 |
Msa1304180 | Msa1373950 | 0.835475 | 1.642689e-56 | -8.615850e-47 |
Msa1304180 | Msa1385620 | 0.801794 | 7.608951e-49 | -8.615850e-47 |
Msa1304180 | Msa1385900 | 0.824049 | 9.963928e-54 | -8.615850e-47 |
Msa1304180 | Msa1395230 | -0.815372 | 9.562126e-52 | -8.615850e-47 |
Msa1304180 | Msa1398480 | 0.845756 | 3.328899e-59 | -8.615850e-47 |
Msa1304180 | Msa1411070 | 0.832251 | 1.051474e-55 | -8.615850e-47 |
Msa1304180 | Msa1417530 | 0.824509 | 7.765157e-54 | -8.615850e-47 |
Msa1304180 | Msa1418200 | 0.812426 | 4.266139e-51 | -8.615850e-47 |
Msa1304180 | Msa1421870 | 0.809687 | 1.673019e-50 | -8.615850e-47 |
Msa1304180 | Msa1423450 | 0.807531 | 4.829012e-50 | -8.615850e-47 |
Msa1304180 | Msa1427830 | 0.855389 | 6.518023e-62 | -8.615850e-47 |
Msa1304180 | Msa1428420 | 0.838331 | 3.064094e-57 | -8.615850e-47 |
Msa1304180 | Msa1431000 | 0.819039 | 1.431655e-52 | -8.615850e-47 |
Msa1304180 | Msa1438270 | 0.829455 | 5.099772e-55 | -8.615850e-47 |
Msa1304180 | Msa1440610 | 0.827085 | 1.900547e-54 | -8.615850e-47 |
Msa1304180 | Msa1447440 | 0.841546 | 4.450277e-58 | -8.615850e-47 |
Msa1304180 | Msa1450020 | 0.817713 | 2.858226e-52 | -8.615850e-47 |
Msa1304180 | Msa1453620 | 0.829488 | 5.005420e-55 | -8.615850e-47 |
Msa1304180 | Msa1454110 | 0.838990 | 2.070845e-57 | -8.615850e-47 |
Msa1304180 | Msa1456810 | 0.803370 | 3.600832e-49 | -8.615850e-47 |
Msa1304180 | Msa1460310 | -0.836943 | 6.955519e-57 | -8.615850e-47 |
Msa1304180 | Msa1463970 | 0.825290 | 5.080184e-54 | -8.615850e-47 |
Msa1304180 | Msa1464560 | 0.812812 | 3.511187e-51 | -8.615850e-47 |
Msa0367140 | Msa1304180 | -0.806107 | 9.659227e-50 | -8.615850e-47 |
Msa0371540 | Msa1304180 | 0.809578 | 1.765667e-50 | -8.615850e-47 |
Msa0376510 | Msa1304180 | 0.833353 | 5.600000e-56 | -8.615850e-47 |
Msa0377280 | Msa1304180 | 0.809635 | 1.716346e-50 | -8.615850e-47 |
Msa0378080 | Msa1304180 | 0.814188 | 1.749451e-51 | -8.615850e-47 |
Msa0389060 | Msa1304180 | 0.809160 | 2.171023e-50 | -8.615850e-47 |
Msa0404690 | Msa1304180 | 0.801738 | 7.815534e-49 | -8.615850e-47 |
Msa0412970 | Msa1304180 | 0.816396 | 5.649846e-52 | -8.615850e-47 |
Msa0413740 | Msa1304180 | 0.815687 | 8.137551e-52 | -8.615850e-47 |
Msa0416800 | Msa1304180 | 0.802208 | 6.255803e-49 | -8.615850e-47 |
Msa0418430 | Msa1304180 | 0.804926 | 1.708428e-49 | -8.615850e-47 |
Msa0419970 | Msa1304180 | 0.803766 | 2.981155e-49 | -8.615850e-47 |
Msa0423360 | Msa1304180 | -0.809164 | 2.166771e-50 | -8.615850e-47 |
Msa0425050 | Msa1304180 | 0.842102 | 3.172980e-58 | -8.615850e-47 |
Msa0426110 | Msa1304180 | 0.812764 | 3.597688e-51 | -8.615850e-47 |
Msa0430620 | Msa1304180 | 0.821292 | 4.362920e-53 | -8.615850e-47 |
Msa0431710 | Msa1304180 | 0.809521 | 1.815885e-50 | -8.615850e-47 |
Msa0434050 | Msa1304180 | 0.819963 | 8.812581e-53 | -8.615850e-47 |
Msa0442850 | Msa1304180 | 0.807550 | 4.784996e-50 | -8.615850e-47 |
Msa0450050 | Msa1304180 | 0.813318 | 2.719192e-51 | -8.615850e-47 |
Msa0462590 | Msa1304180 | 0.843792 | 1.126570e-58 | -8.615850e-47 |
Msa0463460 | Msa1304180 | 0.824993 | 5.972289e-54 | -8.615850e-47 |
Msa0465790 | Msa1304180 | 0.815529 | 8.825604e-52 | -8.615850e-47 |
Msa0466060 | Msa1304180 | 0.810822 | 9.520704e-51 | -8.615850e-47 |
Msa0467900 | Msa1304180 | -0.800258 | 1.568153e-48 | -8.615850e-47 |
Msa0470180 | Msa1304180 | 0.825263 | 5.155883e-54 | -8.615850e-47 |
Msa0481380 | Msa1304180 | 0.815530 | 8.820441e-52 | -8.615850e-47 |
Msa0980440 | Msa1304180 | 0.848063 | 7.780774e-60 | -8.615850e-47 |
Msa0981740 | Msa1304180 | 0.825426 | 4.718006e-54 | -8.615850e-47 |
Msa0996130 | Msa1304180 | 0.830040 | 3.672672e-55 | -8.615850e-47 |
Msa1001450 | Msa1304180 | 0.801911 | 7.202217e-49 | -8.615850e-47 |
Msa1004210 | Msa1304180 | 0.838751 | 2.386718e-57 | -8.615850e-47 |
Msa1004260 | Msa1304180 | 0.820658 | 6.105966e-53 | -8.615850e-47 |
Msa1008490 | Msa1304180 | 0.816635 | 4.995001e-52 | -8.615850e-47 |
Msa1016670 | Msa1304180 | 0.847450 | 1.147854e-59 | -8.615850e-47 |
Msa1018020 | Msa1304180 | -0.800065 | 1.716760e-48 | -8.615850e-47 |
Msa1026500 | Msa1304180 | 0.801238 | 9.894845e-49 | -8.615850e-47 |
Msa1032350 | Msa1304180 | 0.813492 | 2.491088e-51 | -8.615850e-47 |
Msa1036390 | Msa1304180 | 0.868938 | 4.501080e-66 | -8.615850e-47 |
Msa1037000 | Msa1304180 | 0.833207 | 6.089616e-56 | -8.615850e-47 |
Msa1038050 | Msa1304180 | 0.848374 | 6.382525e-60 | -8.615850e-47 |
Msa1046610 | Msa1304180 | 0.852525 | 4.360718e-61 | -8.615850e-47 |
Msa1058010 | Msa1304180 | 0.816943 | 4.261587e-52 | -8.615850e-47 |
Msa1065370 | Msa1304180 | 0.817211 | 3.708292e-52 | -8.615850e-47 |
Msa1072350 | Msa1304180 | 0.824787 | 6.679351e-54 | -8.615850e-47 |
Msa1073840 | Msa1304180 | 0.847368 | 1.208493e-59 | -8.615850e-47 |
Msa1076680 | Msa1304180 | 0.863178 | 2.997415e-64 | -8.615850e-47 |
Msa1080460 | Msa1304180 | 0.831778 | 1.376122e-55 | -8.615850e-47 |
Msa1087530 | Msa1304180 | 0.805763 | 1.141004e-49 | -8.615850e-47 |
Msa1095800 | Msa1304180 | -0.805132 | 1.547358e-49 | -8.615850e-47 |
Msa1098560 | Msa1304180 | 0.803698 | 3.079151e-49 | -8.615850e-47 |
Msa1102540 | Msa1304180 | 0.822204 | 2.684233e-53 | -8.615850e-47 |
Msa0240780 | Msa1304180 | 0.834345 | 3.162623e-56 | -8.615850e-47 |
Msa0252180 | Msa1304180 | 0.800594 | 1.339492e-48 | -8.615850e-47 |
Msa0254290 | Msa1304180 | 0.808441 | 3.092484e-50 | -8.615850e-47 |
Msa0258670 | Msa1304180 | -0.853672 | 2.046697e-61 | -8.615850e-47 |
Msa0264940 | Msa1304180 | -0.834474 | 2.935063e-56 | -8.615850e-47 |
Msa0265820 | Msa1304180 | 0.828245 | 1.000599e-54 | -8.615850e-47 |
Msa0269360 | Msa1304180 | 0.824777 | 6.717221e-54 | -8.615850e-47 |
Msa0278670 | Msa1304180 | 0.811142 | 8.116147e-51 | -8.615850e-47 |
Msa0282170 | Msa1304180 | 0.823727 | 1.185417e-53 | -8.615850e-47 |
Msa0288240 | Msa1304180 | 0.820303 | 7.364057e-53 | -8.615850e-47 |
Msa0288330 | Msa1304180 | 0.845326 | 4.355540e-59 | -8.615850e-47 |
Msa0298940 | Msa1304180 | 0.851764 | 7.176832e-61 | -8.615850e-47 |
Msa0298970 | Msa1304180 | 0.848784 | 4.916500e-60 | -8.615850e-47 |
Msa0301180 | Msa1304180 | 0.800616 | 1.326006e-48 | -8.615850e-47 |
Msa0302990 | Msa1304180 | -0.836406 | 9.533330e-57 | -8.615850e-47 |
Msa0304740 | Msa1304180 | 0.810257 | 1.260996e-50 | -8.615850e-47 |
Msa0304920 | Msa1304180 | 0.824900 | 6.280440e-54 | -8.615850e-47 |
Msa0312690 | Msa1304180 | -0.814685 | 1.358403e-51 | -8.615850e-47 |
Msa0318070 | Msa1304180 | 0.801283 | 9.686060e-49 | -8.615850e-47 |
Msa0318250 | Msa1304180 | 0.834925 | 2.260791e-56 | -8.615850e-47 |
Msa0318270 | Msa1304180 | 0.865105 | 7.516349e-65 | -8.615850e-47 |
Msa0318310 | Msa1304180 | 0.863709 | 2.051529e-64 | -8.615850e-47 |
Msa0325470 | Msa1304180 | 0.811810 | 5.812505e-51 | -8.615850e-47 |
Msa0326670 | Msa1304180 | 0.818091 | 2.349235e-52 | -8.615850e-47 |
Msa0327860 | Msa1304180 | 0.808655 | 2.783216e-50 | -8.615850e-47 |
Msa0331590 | Msa1304180 | 0.813905 | 2.020465e-51 | -8.615850e-47 |
Msa0342200 | Msa1304180 | 0.865742 | 4.737242e-65 | -8.615850e-47 |
Msa0342340 | Msa1304180 | -0.851217 | 1.024850e-60 | -8.615850e-47 |
Msa0358170 | Msa1304180 | 0.838072 | 3.573284e-57 | -8.615850e-47 |
Msa1111630 | Msa1304180 | 0.880179 | 6.794118e-70 | -8.615850e-47 |
Msa1111760 | Msa1304180 | 0.801351 | 9.380120e-49 | -8.615850e-47 |
Msa1112000 | Msa1304180 | 0.849449 | 3.210451e-60 | -8.615850e-47 |
Msa1114020 | Msa1304180 | 0.820534 | 6.520370e-53 | -8.615850e-47 |
Msa1115330 | Msa1304180 | 0.825896 | 3.651339e-54 | -8.615850e-47 |
Msa1116550 | Msa1304180 | 0.822761 | 1.992492e-53 | -8.615850e-47 |
Msa1118140 | Msa1304180 | 0.828574 | 8.333499e-55 | -8.615850e-47 |
Msa1129560 | Msa1304180 | 0.814749 | 1.314871e-51 | -8.615850e-47 |
Msa1129720 | Msa1304180 | 0.820390 | 7.035187e-53 | -8.615850e-47 |
Msa1130650 | Msa1304180 | 0.824897 | 6.293346e-54 | -8.615850e-47 |
Msa1132890 | Msa1304180 | 0.804058 | 2.591702e-49 | -8.615850e-47 |
Msa1133660 | Msa1304180 | 0.806716 | 7.187081e-50 | -8.615850e-47 |
Msa1140010 | Msa1304180 | 0.803698 | 3.078796e-49 | -8.615850e-47 |
Msa1142850 | Msa1304180 | -0.821031 | 5.011139e-53 | -8.615850e-47 |
Msa1154070 | Msa1304180 | 0.809212 | 2.115530e-50 | -8.615850e-47 |
Msa1156180 | Msa1304180 | 0.817809 | 2.719706e-52 | -8.615850e-47 |
Msa1159360 | Msa1304180 | 0.807851 | 4.130144e-50 | -8.615850e-47 |
Msa1159990 | Msa1304180 | 0.815072 | 1.114697e-51 | -8.615850e-47 |
Msa1167000 | Msa1304180 | 0.808130 | 3.602216e-50 | -8.615850e-47 |
Msa1167170 | Msa1304180 | 0.864705 | 1.003240e-64 | -8.615850e-47 |
Msa1170040 | Msa1304180 | -0.808662 | 2.773725e-50 | -8.615850e-47 |
Msa1171690 | Msa1304180 | 0.839715 | 1.342287e-57 | -8.615850e-47 |
Msa1177240 | Msa1304180 | 0.811861 | 5.665470e-51 | -8.615850e-47 |
Msa1182830 | Msa1304180 | 0.810081 | 1.376526e-50 | -8.615850e-47 |
Msa1184730 | Msa1304180 | 0.810297 | 1.236061e-50 | -8.615850e-47 |
Msa1186570 | Msa1304180 | 0.809017 | 2.328751e-50 | -8.615850e-47 |
Msa1188940 | Msa1304180 | 0.802623 | 5.137325e-49 | -8.615850e-47 |
Msa1204980 | Msa1304180 | -0.842421 | 2.612139e-58 | -8.615850e-47 |
Msa1205010 | Msa1304180 | -0.842488 | 2.508769e-58 | -8.615850e-47 |
Msa1205130 | Msa1304180 | 0.801017 | 1.098143e-48 | -8.615850e-47 |
Msa1206020 | Msa1304180 | 0.855791 | 4.975872e-62 | -8.615850e-47 |
Msa1207480 | Msa1304180 | -0.815568 | 8.648765e-52 | -8.615850e-47 |
Msa1210770 | Msa1304180 | 0.850276 | 1.885377e-60 | -8.615850e-47 |
Msa1211070 | Msa1304180 | 0.806279 | 8.887768e-50 | -8.615850e-47 |
Msa1211090 | Msa1304180 | 0.812366 | 4.394844e-51 | -8.615850e-47 |
Msa1211110 | Msa1304180 | 0.804887 | 1.741088e-49 | -8.615850e-47 |
Msa1220230 | Msa1304180 | 0.819804 | 9.583166e-53 | -8.615850e-47 |
Msa1221200 | Msa1304180 | -0.840507 | 8.341012e-58 | -8.615850e-47 |
Msa1221560 | Msa1304180 | 0.802441 | 5.601494e-49 | -8.615850e-47 |
Msa1223460 | Msa1304180 | 0.814951 | 1.185676e-51 | -8.615850e-47 |
Msa0490350 | Msa1304180 | 0.802158 | 6.406941e-49 | -8.615850e-47 |
Msa0500360 | Msa1304180 | 0.814937 | 1.194220e-51 | -8.615850e-47 |
Msa0505390 | Msa1304180 | 0.815869 | 7.411020e-52 | -8.615850e-47 |
Msa0516450 | Msa1304180 | 0.844302 | 8.225945e-59 | -8.615850e-47 |
Msa0517340 | Msa1304180 | 0.811675 | 6.216463e-51 | -8.615850e-47 |
Msa0518040 | Msa1304180 | 0.816511 | 5.325098e-52 | -8.615850e-47 |
Msa0524050 | Msa1304180 | 0.810106 | 1.359094e-50 | -8.615850e-47 |
Msa0524120 | Msa1304180 | 0.812381 | 4.363168e-51 | -8.615850e-47 |
Msa0524890 | Msa1304180 | -0.825957 | 3.531536e-54 | -8.615850e-47 |
Msa0526640 | Msa1304180 | -0.838338 | 3.052288e-57 | -8.615850e-47 |
Msa0527600 | Msa1304180 | 0.814475 | 1.512030e-51 | -8.615850e-47 |
Msa0535030 | Msa1304180 | 0.809526 | 1.811746e-50 | -8.615850e-47 |
Msa0535060 | Msa1304180 | 0.816713 | 4.798832e-52 | -8.615850e-47 |
Msa0540070 | Msa1304180 | 0.835324 | 1.793328e-56 | -8.615850e-47 |
Msa0542010 | Msa1304180 | 0.819471 | 1.141476e-52 | -8.615850e-47 |
Msa0543900 | Msa1304180 | 0.801252 | 9.828922e-49 | -8.615850e-47 |
Msa0557680 | Msa1304180 | 0.808176 | 3.521799e-50 | -8.615850e-47 |
Msa0564930 | Msa1304180 | 0.829163 | 6.002531e-55 | -8.615850e-47 |
Msa0574170 | Msa1304180 | 0.818311 | 2.094416e-52 | -8.615850e-47 |
Msa0576420 | Msa1304180 | 0.801192 | 1.010887e-48 | -8.615850e-47 |
Msa0577230 | Msa1304180 | 0.805271 | 1.446750e-49 | -8.615850e-47 |
Msa0583740 | Msa1304180 | 0.818652 | 1.752971e-52 | -8.615850e-47 |
Msa0843280 | Msa1304180 | 0.830518 | 2.807215e-55 | -8.615850e-47 |
Msa0847200 | Msa1304180 | 0.840497 | 8.389628e-58 | -8.615850e-47 |
Msa0853540 | Msa1304180 | 0.806738 | 7.110307e-50 | -8.615850e-47 |
Msa0863250 | Msa1304180 | 0.807243 | 5.560690e-50 | -8.615850e-47 |
Msa0863770 | Msa1304180 | 0.824564 | 7.538151e-54 | -8.615850e-47 |
Msa0864690 | Msa1304180 | 0.818696 | 1.712715e-52 | -8.615850e-47 |
Msa0890250 | Msa1304180 | 0.817079 | 3.971646e-52 | -8.615850e-47 |
Msa0902980 | Msa1304180 | 0.820968 | 5.181643e-53 | -8.615850e-47 |
Msa0903730 | Msa1304180 | 0.810340 | 1.210150e-50 | -8.615850e-47 |
Msa0909710 | Msa1304180 | 0.850713 | 1.421240e-60 | -8.615850e-47 |
Msa0937940 | Msa1304180 | 0.807170 | 5.760000e-50 | -8.615850e-47 |
Msa0938420 | Msa1304180 | 0.808416 | 3.130349e-50 | -8.615850e-47 |
Msa0944770 | Msa1304180 | 0.800416 | 1.456496e-48 | -8.615850e-47 |
Msa0946120 | Msa1304180 | 0.815277 | 1.003972e-51 | -8.615850e-47 |
Msa0951720 | Msa1304180 | 0.819006 | 1.456835e-52 | -8.615850e-47 |
Msa0961420 | Msa1304180 | -0.819706 | 1.008923e-52 | -8.615850e-47 |
Msa0970050 | Msa1304180 | 0.828168 | 1.044708e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304180 | MtrunA17_Chr4g0062931 | 93.772 | 562 | 15 | 4 | 1 | 549 | 1 | 555 | 0.0 | 854 |
Msa1304180 | MtrunA17_Chr5g0429721 | 32.911 | 79 | 52 | 1 | 5 | 82 | 34 | 112 | 1.43e-12 | 69.7 |
Msa1304180 | MtrunA17_Chr1g0210241 | 35.955 | 89 | 56 | 1 | 1 | 88 | 1 | 89 | 7.29e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304180 | AT5G19960.1 | 42.487 | 193 | 66 | 5 | 1 | 184 | 1 | 157 | 8.00e-33 | 129 |
Msa1304180 | AT5G19960.1 | 41.379 | 116 | 66 | 1 | 425 | 540 | 221 | 334 | 1.14e-15 | 79.0 |
Msa1304180 | AT5G19960.2 | 41.379 | 116 | 66 | 1 | 425 | 540 | 133 | 246 | 6.37e-16 | 78.2 |
Msa1304180 | AT4G39260.3 | 42.857 | 84 | 47 | 1 | 9 | 91 | 8 | 91 | 6.13e-15 | 70.9 |
Msa1304180 | AT3G47120.2 | 39.474 | 76 | 45 | 1 | 5 | 79 | 34 | 109 | 3.30e-13 | 70.9 |
Msa1304180 | AT3G47120.1 | 39.474 | 76 | 45 | 1 | 5 | 79 | 34 | 109 | 5.52e-13 | 70.9 |
Find 152 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCCGTGTGGTTAAAGTTAA+TGG | 0.201362 | 8_3:-67447052 | Msa1304180:CDS |
GTTATGAATCAGACTATTAA+TGG | 0.247320 | 8_3:-67447073 | Msa1304180:intron |
GGTGGTGGCAGATCAAATTT+TGG | 0.252328 | 8_3:-67446998 | Msa1304180:CDS |
CGCACTGTCTTCAATTTGTA+TGG | 0.310277 | 8_3:-67447463 | Msa1304180:CDS |
GGGAAGACCACCAACGTAAA+TGG | 0.322442 | 8_3:+67447510 | None:intergenic |
GGTGGAGGTGGCGGTGGTGG+TGG | 0.340367 | 8_3:-67447013 | Msa1304180:CDS |
GGCGGTGGAGGTGGCGGTGG+TGG | 0.354294 | 8_3:-67447016 | Msa1304180:CDS |
CCCTATCCCTGTCACGGTCT+CGG | 0.354327 | 8_3:+67446666 | None:intergenic |
CATTACCATGATCATAATCT+TGG | 0.358631 | 8_3:+67446891 | None:intergenic |
TGAAGTAGTAAATATCAATT+TGG | 0.359952 | 8_3:-67447651 | None:intergenic |
CCCTATCCCTATCATGGTCT+CGG | 0.372822 | 8_3:+67446573 | None:intergenic |
GTGAGGTCTCGTGGCGGTGG+AGG | 0.372910 | 8_3:-67447028 | Msa1304180:CDS |
ATTGGAATCATGACGGTGAT+AGG | 0.374936 | 8_3:-67446205 | Msa1304180:CDS |
CTTAAAATAAATTTAGCATA+TGG | 0.379102 | 8_3:-67443735 | Msa1304180:three_prime_UTR |
TCCTATCTCTGTCACGGTCT+CGG | 0.379142 | 8_3:+67446387 | None:intergenic |
TGTATGGTAAGATTCATCTT+TGG | 0.384035 | 8_3:-67443857 | Msa1304180:three_prime_UTR |
ATAGGTCTCGAGACCATGAT+AGG | 0.390177 | 8_3:-67446766 | Msa1304180:CDS |
CCCTGTCACGGTCACGGTCT+CGG | 0.400331 | 8_3:+67446480 | None:intergenic |
CTTACAAATGGAAGTCTAGA+TGG | 0.403989 | 8_3:-67443985 | Msa1304180:CDS |
AGGTCTCGTGGCGGTGGAGG+TGG | 0.410261 | 8_3:-67447025 | Msa1304180:CDS |
ATGATGAAAGGAATGGAGAT+TGG | 0.413487 | 8_3:-67446946 | Msa1304180:CDS |
CCTGTCACGGTCACGGTCTC+GGG | 0.417238 | 8_3:+67446481 | None:intergenic |
ATAGATCCCGAGACCATGAT+AGG | 0.418281 | 8_3:-67446580 | Msa1304180:CDS |
GCCGTGTGGTTAAAGTTAAT+GGG | 0.420536 | 8_3:-67447051 | Msa1304180:CDS |
AAAGCGCGTTAGACCGTGAT+AGG | 0.422370 | 8_3:-67446505 | Msa1304180:CDS |
AAGATTATAGCACTGCTTGT+TGG | 0.425567 | 8_3:+67443784 | None:intergenic |
CGTGGCGGTGGAGGTGGCGG+TGG | 0.426158 | 8_3:-67447019 | Msa1304180:CDS |
AGAAAGAAGACTTAATGTTA+TGG | 0.428868 | 8_3:-67445349 | Msa1304180:CDS |
AAAGCATGTTAGATGATGAT+TGG | 0.430802 | 8_3:-67446223 | Msa1304180:CDS |
TTAGCATATGGCATCTTACC+TGG | 0.431591 | 8_3:-67443723 | Msa1304180:three_prime_UTR |
CCCGAGACCGTGACCGTGAC+AGG | 0.432306 | 8_3:-67446481 | Msa1304180:CDS |
TTCTAAGCTGGAAGAGGGAT+TGG | 0.434291 | 8_3:-67445373 | Msa1304180:CDS |
TTCTATCCCTATCCCTATCA+TGG | 0.434809 | 8_3:+67446753 | None:intergenic |
TTACCTTGGTCAACTGCATC+TGG | 0.438734 | 8_3:+67445142 | None:intergenic |
TCTCGTGGCGGTGGAGGTGG+CGG | 0.438886 | 8_3:-67447022 | Msa1304180:CDS |
CCTATCCCTGTCACGGTCTC+GGG | 0.441091 | 8_3:+67446667 | None:intergenic |
CAAGCTAGAGCAAGTATGTT+AGG | 0.441748 | 8_3:-67446608 | Msa1304180:CDS |
GGTGATGGTGATGGTGGTCT+TGG | 0.448887 | 8_3:-67444012 | Msa1304180:CDS |
ATCAATGACCAACGTACACT+TGG | 0.451190 | 8_3:-67447280 | Msa1304180:CDS |
CCTATCTCTGTCACGGTCTC+GGG | 0.453975 | 8_3:+67446388 | None:intergenic |
AAAGCATGTTAGTCCGTGAT+AGG | 0.455542 | 8_3:-67446691 | Msa1304180:CDS |
AACCATGATGTCACGGTCTC+GGG | 0.456700 | 8_3:+67446295 | None:intergenic |
GGGGTGAGGTCTCGTGGCGG+TGG | 0.457192 | 8_3:-67447031 | Msa1304180:CDS |
GGAGTTACAAAAGCACTCTA+AGG | 0.459318 | 8_3:-67445328 | Msa1304180:intron |
GAGACCGTGACATCATGGTT+AGG | 0.463473 | 8_3:-67446292 | Msa1304180:CDS |
TGATAGGGCTGAAAATGAAC+TGG | 0.463823 | 8_3:-67446189 | Msa1304180:CDS |
TGATGAAAGGAATGGAGATT+GGG | 0.465545 | 8_3:-67446945 | Msa1304180:CDS |
CTCATCATTGTGGTCCCCAT+TGG | 0.467282 | 8_3:+67445889 | None:intergenic |
CCCGAGACCGTGACAGAGAT+AGG | 0.470681 | 8_3:-67446388 | Msa1304180:CDS |
CGAGACCAAGATTATGATCA+TGG | 0.478575 | 8_3:-67446896 | Msa1304180:CDS |
AGAGGTCTCGAGACCGTGAT+AGG | 0.480387 | 8_3:-67446802 | Msa1304180:CDS |
GTAATGAGAAAGATGGATAC+AGG | 0.480470 | 8_3:-67446874 | Msa1304180:CDS |
AAAGATGGATACAGGAATAG+AGG | 0.481913 | 8_3:-67446866 | Msa1304180:CDS |
ACAGGAATAGAGGCAGTGAT+TGG | 0.482052 | 8_3:-67446856 | Msa1304180:CDS |
ATAGTCCATCAGATTCCAAT+GGG | 0.482340 | 8_3:-67445904 | Msa1304180:CDS |
TTCTATCCCTATCCCTATCA+TGG | 0.483071 | 8_3:+67446567 | None:intergenic |
CCCGAGACCGTGACAGGGAT+AGG | 0.483596 | 8_3:-67446667 | Msa1304180:CDS |
TGTTTCATCAGTGGCGTCGA+AGG | 0.487655 | 8_3:+67447489 | None:intergenic |
ACTGGAAAACAGCAGGGTAC+AGG | 0.494266 | 8_3:-67446171 | Msa1304180:CDS |
ATAGGTCCCGAGACCGTGAC+AGG | 0.495188 | 8_3:-67446673 | Msa1304180:CDS |
TCGAGTCCAATCACCACCTC+TGG | 0.499545 | 8_3:+67446832 | None:intergenic |
ATTGGACCAGAGGTGGTGAT+TGG | 0.502244 | 8_3:-67446838 | Msa1304180:CDS |
TAACCATGATGTCACGGTCT+CGG | 0.507957 | 8_3:+67446294 | None:intergenic |
GGTCTTGGACAACTTACAAA+TGG | 0.508402 | 8_3:-67443997 | Msa1304180:CDS |
ACAGGGTGGAGATGTGGATA+AGG | 0.508614 | 8_3:-67446153 | Msa1304180:CDS |
CCTATCCCTATCATGGTCTC+GGG | 0.509297 | 8_3:+67446574 | None:intergenic |
AGACCGTGACATCATGGTTA+GGG | 0.509461 | 8_3:-67446291 | Msa1304180:CDS |
CATCATAATGATGAAAGGAA+TGG | 0.517662 | 8_3:-67446953 | Msa1304180:CDS |
CCCGAGACCATGATAGGGAT+AGG | 0.517941 | 8_3:-67446574 | Msa1304180:CDS |
CACGGTCTCGGGACCTATCA+CGG | 0.518091 | 8_3:+67446492 | None:intergenic |
AAAATGAACTGGAAAACAGC+AGG | 0.521165 | 8_3:-67446178 | Msa1304180:CDS |
CTCGAGACCATGATAGGGAT+AGG | 0.523344 | 8_3:-67446760 | Msa1304180:CDS |
TTGTAACTTTCACAAACCCT+AGG | 0.525397 | 8_3:-67447243 | Msa1304180:CDS |
TAGCATCAATTGCAGACCTA+GGG | 0.528965 | 8_3:+67447227 | None:intergenic |
CACGGTCTCGGGACCTATCA+CGG | 0.531377 | 8_3:+67446678 | None:intergenic |
GATAGCTCCATTTACGTTGG+TGG | 0.531498 | 8_3:-67447517 | Msa1304180:CDS |
GATCATGGTAATGAGAAAGA+TGG | 0.531558 | 8_3:-67446881 | Msa1304180:CDS |
TATCTCACTAGCTCCATGTA+TGG | 0.533587 | 8_3:-67443873 | Msa1304180:three_prime_UTR |
CTGGATCCACATCTAAGTTA+CGG | 0.535060 | 8_3:+67446129 | None:intergenic |
TCAGGTTTCTAAGCTGGAAG+AGG | 0.536137 | 8_3:-67445379 | Msa1304180:intron |
CCGAGACCGTGACAGGGATA+GGG | 0.537071 | 8_3:-67446666 | Msa1304180:CDS |
AGAGTGAAGGAGAAAGACTA+TGG | 0.541578 | 8_3:-67447619 | Msa1304180:five_prime_UTR |
CTCGAGACCTATCACGGTCG+CGG | 0.542402 | 8_3:+67446777 | None:intergenic |
CTGGAAAACAGCAGGGTACA+GGG | 0.545302 | 8_3:-67446170 | Msa1304180:CDS |
CAGGTTTCTAAGCTGGAAGA+GGG | 0.546464 | 8_3:-67445378 | Msa1304180:CDS |
AGAAGAGTTGAGCATTTGCA+AGG | 0.546715 | 8_3:-67446362 | Msa1304180:CDS |
AAGATGAATCTTACCATACA+TGG | 0.547436 | 8_3:+67443860 | None:intergenic |
GTCCCGAGACCGTGACATCA+TGG | 0.550463 | 8_3:-67446297 | Msa1304180:CDS |
ATAGCATCAATTGCAGACCT+AGG | 0.550720 | 8_3:+67447226 | None:intergenic |
GACTACCTTGACATCAAGAA+TGG | 0.552219 | 8_3:+67447438 | None:intergenic |
TTATACCCCTGTCACGGTCA+CGG | 0.557856 | 8_3:+67446474 | None:intergenic |
CCGAGACCATGATAGGGATA+GGG | 0.559495 | 8_3:-67446573 | Msa1304180:CDS |
CCCCATTAACTTTAACCACA+CGG | 0.561289 | 8_3:+67447050 | None:intergenic |
GAGCATATGCAAAATTATGA+TGG | 0.562214 | 8_3:-67446725 | Msa1304180:CDS |
CAGGGTACAGGGTGGAGATG+TGG | 0.563252 | 8_3:-67446159 | Msa1304180:CDS |
GAAAGCATGTTAGATCGTGA+TGG | 0.563810 | 8_3:-67446413 | Msa1304180:CDS |
AAAGCATGTTAGACCGCGAT+GGG | 0.565934 | 8_3:-67446319 | Msa1304180:CDS |
TTCTATCCCTATCCCTGTCA+CGG | 0.566463 | 8_3:+67446660 | None:intergenic |
GAACACATGCTAGATTATGA+TGG | 0.568841 | 8_3:-67446632 | Msa1304180:CDS |
GAAATTCATACTATATTGTG+CGG | 0.571168 | 8_3:-67443826 | Msa1304180:three_prime_UTR |
TGGTCCCCATTGGAATCTGA+TGG | 0.575643 | 8_3:+67445899 | None:intergenic |
GTTTCATCAGTGGCGTCGAA+GGG | 0.576277 | 8_3:+67447490 | None:intergenic |
TGGTTAAAGTTAATGGGGTG+AGG | 0.576628 | 8_3:-67447045 | Msa1304180:CDS |
TCTTACTCGATGTTTCTCCT+CGG | 0.578233 | 8_3:+67446044 | None:intergenic |
ATTATCATCATAATGATGAA+AGG | 0.578991 | 8_3:-67446958 | Msa1304180:CDS |
AATAGTCCATCAGATTCCAA+TGG | 0.582473 | 8_3:-67445905 | Msa1304180:CDS |
AGGAATGGAGATTGGGATCG+TGG | 0.582856 | 8_3:-67446938 | Msa1304180:CDS |
TCGAGACCATGATAGGGATA+GGG | 0.583018 | 8_3:-67446759 | Msa1304180:CDS |
GAAAGCATGTTAGACCGCGA+TGG | 0.583363 | 8_3:-67446320 | Msa1304180:CDS |
TTCTACTCCTATCTCTGTCA+CGG | 0.583559 | 8_3:+67446381 | None:intergenic |
TAGCATATGGCATCTTACCT+GGG | 0.588864 | 8_3:-67443722 | Msa1304180:three_prime_UTR |
TGGCGCCATTCTTGATGTCA+AGG | 0.589109 | 8_3:-67447443 | Msa1304180:intron |
CATGGTCTCGAGACCTATCA+CGG | 0.589442 | 8_3:+67446771 | None:intergenic |
GTTAATGGGGTGAGGTCTCG+TGG | 0.592393 | 8_3:-67447037 | Msa1304180:CDS |
TTGGAATCATGACGGTGATA+GGG | 0.593640 | 8_3:-67446204 | Msa1304180:CDS |
GGCAGTGATTGGACCAGAGG+TGG | 0.596616 | 8_3:-67446845 | Msa1304180:CDS |
CCGAGACCGTGACCGTGACA+GGG | 0.596911 | 8_3:-67446480 | Msa1304180:CDS |
AAAGCATGTTAGATCGTGAT+GGG | 0.597103 | 8_3:-67446412 | Msa1304180:CDS |
ATTGGACTCGACAGCATCAG+AGG | 0.597239 | 8_3:-67446820 | Msa1304180:CDS |
GAGAGTGACGGTGATGGTGA+TGG | 0.598421 | 8_3:-67444021 | Msa1304180:CDS |
TTGTCTCTTTAATTGCCTAG+TGG | 0.600658 | 8_3:-67443903 | Msa1304180:three_prime_UTR |
TCAATGACCAACGTACACTT+GGG | 0.603480 | 8_3:-67447279 | Msa1304180:CDS |
TCAATATTGTTCGAGAGTGA+CGG | 0.605658 | 8_3:-67444033 | Msa1304180:CDS |
TAGATCCCGAGACCATGATA+GGG | 0.613104 | 8_3:-67446579 | Msa1304180:CDS |
AGTGCGAATTGTTTCATCAG+TGG | 0.616718 | 8_3:+67447480 | None:intergenic |
TAAGGACCGTAACTTAGATG+TGG | 0.622168 | 8_3:-67446135 | Msa1304180:CDS |
TCAGTTCCACAAAATGACAC+TGG | 0.624699 | 8_3:-67447545 | Msa1304180:exon |
AGAGGCAGTGATTGGACCAG+AGG | 0.630012 | 8_3:-67446848 | Msa1304180:CDS |
AGCATTTCCCAAGTGTACGT+TGG | 0.632194 | 8_3:+67447272 | None:intergenic |
GATGCTATCAACGATATGAA+CGG | 0.633466 | 8_3:-67447211 | Msa1304180:CDS |
TATCCCTAACCATGATGTCA+CGG | 0.634194 | 8_3:+67446288 | None:intergenic |
ATCACATTACCTCATCATTG+TGG | 0.638871 | 8_3:+67445879 | None:intergenic |
TAGGTCTCGAGACCATGATA+GGG | 0.644021 | 8_3:-67446765 | Msa1304180:CDS |
CACGGTCTCGGGACCCATCG+CGG | 0.649874 | 8_3:+67446306 | None:intergenic |
AGTGACGGTGATGGTGATGG+TGG | 0.650592 | 8_3:-67444018 | Msa1304180:CDS |
GATGATAGCTCCATTTACGT+TGG | 0.659955 | 8_3:-67447520 | Msa1304180:CDS |
AGGTAGAAGATGAATTAGAG+AGG | 0.662402 | 8_3:-67445722 | Msa1304180:CDS |
CGAGACCGTGACCGTGACAG+GGG | 0.664208 | 8_3:-67446479 | Msa1304180:CDS |
CAATGGGGACCACAATGATG+AGG | 0.667084 | 8_3:-67445888 | Msa1304180:intron |
TCGCCAGATGCAGTTGACCA+AGG | 0.667948 | 8_3:-67445145 | Msa1304180:intron |
TTGTTCGAGAGTGACGGTGA+TGG | 0.673128 | 8_3:-67444027 | Msa1304180:CDS |
AAATGAACTGGAAAACAGCA+GGG | 0.689851 | 8_3:-67446177 | Msa1304180:CDS |
ATATTTACCGCAGAAACGGG+AGG | 0.695680 | 8_3:-67445202 | Msa1304180:intron |
AATGGGGTGAGGTCTCGTGG+CGG | 0.699964 | 8_3:-67447034 | Msa1304180:CDS |
GATGATGATTGGAATCATGA+CGG | 0.709264 | 8_3:-67446212 | Msa1304180:CDS |
TAGGTCCCGAGACCGTGACA+GGG | 0.714552 | 8_3:-67446672 | Msa1304180:CDS |
CCGTGTGGTTAAAGTTAATG+GGG | 0.715692 | 8_3:-67447050 | Msa1304180:CDS |
TCAGACTATTAATGGCCGTG+TGG | 0.721965 | 8_3:-67447065 | Msa1304180:intron |
AATGGAGATTGGGATCGTGG+CGG | 0.727702 | 8_3:-67446935 | Msa1304180:CDS |
GCAATTAAAGAGACAACACA+TGG | 0.728798 | 8_3:+67443910 | None:intergenic |
GAAAACAGCAGGGTACAGGG+TGG | 0.744053 | 8_3:-67446167 | Msa1304180:CDS |
TAGTCCATCAGATTCCAATG+GGG | 0.775487 | 8_3:-67445903 | Msa1304180:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAATTAAATAATTAACAA+GGG | + | chr8_3:67443929-67443948 | None:intergenic | 10.0% |
!! | AAGAAATTAAATAATTAACA+AGG | + | chr8_3:67443930-67443949 | None:intergenic | 10.0% |
!! | TAATAATCAATTCAAGTAAT+TGG | - | chr8_3:67443954-67443973 | Msa1304180:three_prime_UTR | 15.0% |
!! | AATAATCAATTCAAGTAATT+GGG | - | chr8_3:67443955-67443974 | Msa1304180:three_prime_UTR | 15.0% |
!! | AAACTAAAATGAATGAATAA+TGG | - | chr8_3:67445655-67445674 | Msa1304180:intron | 15.0% |
!! | TTATCAAACATTCAAATATT+GGG | + | chr8_3:67445790-67445809 | None:intergenic | 15.0% |
!! | TTTATCAAACATTCAAATAT+TGG | + | chr8_3:67445791-67445810 | None:intergenic | 15.0% |
!!! | AAATATAACTTTTTGGAAAA+GGG | + | chr8_3:67446648-67446667 | None:intergenic | 15.0% |
!!! | AAAATATAACTTTTTGGAAA+AGG | + | chr8_3:67446649-67446668 | None:intergenic | 15.0% |
!! | CTTAAAATAAATTTAGCATA+TGG | - | chr8_3:67447570-67447589 | Msa1304180:five_prime_UTR | 15.0% |
!! | AGTTTATTTGTGTTAATGTT+TGG | - | chr8_3:67444155-67444174 | Msa1304180:intron | 20.0% |
!! | ATTATCATCATAATGATGAA+AGG | - | chr8_3:67444347-67444366 | Msa1304180:intron | 20.0% |
!!! | ATAATGGAAATTTGTCAATA+TGG | - | chr8_3:67445671-67445690 | Msa1304180:intron | 20.0% |
!! | TAAATGATATTGCTAACATT+GGG | - | chr8_3:67446223-67446242 | Msa1304180:CDS | 20.0% |
!! | TAAACATTATAAAAAGTCAC+AGG | + | chr8_3:67446391-67446410 | None:intergenic | 20.0% |
!! | AATGTTTAAATTTCACAATG+TGG | - | chr8_3:67446403-67446422 | Msa1304180:CDS | 20.0% |
!!! | AATATAACTTTTTGGAAAAG+GGG | + | chr8_3:67446647-67446666 | None:intergenic | 20.0% |
!!! | TTGATTTTCTAATCATTCAT+AGG | + | chr8_3:67446837-67446856 | None:intergenic | 20.0% |
!! | AAACATTGCTTAAAATAATG+TGG | + | chr8_3:67446862-67446881 | None:intergenic | 20.0% |
!!! | AAGAAATTTTTAATCAATCC+AGG | + | chr8_3:67447630-67447649 | None:intergenic | 20.0% |
! | GTTATGAATCAGACTATTAA+TGG | - | chr8_3:67444232-67444251 | Msa1304180:intron | 25.0% |
!! | ATCATAATTTTGCATATGCT+CGG | + | chr8_3:67444581-67444600 | None:intergenic | 25.0% |
! | ATGTCACAGAAAATTAACAT+TGG | + | chr8_3:67445290-67445309 | None:intergenic | 25.0% |
! | AGAAAGAAGACTTAATGTTA+TGG | - | chr8_3:67445956-67445975 | Msa1304180:intron | 25.0% |
! | TTAAAACTTAGACATTACCT+TGG | + | chr8_3:67446180-67446199 | None:intergenic | 25.0% |
! | GTAAATGATATTGCTAACAT+TGG | - | chr8_3:67446222-67446241 | Msa1304180:CDS | 25.0% |
! | ATATATATAAGACACAAACC+TGG | + | chr8_3:67446334-67446353 | None:intergenic | 25.0% |
! | TATATCGTCAACATAATTCA+AGG | + | chr8_3:67446549-67446568 | None:intergenic | 25.0% |
! | GACGATATAGAATCATTATA+TGG | - | chr8_3:67446560-67446579 | Msa1304180:CDS | 25.0% |
!! | CCATGGAAAATATAACTTTT+TGG | + | chr8_3:67446655-67446674 | None:intergenic | 25.0% |
!! | CCAAAAAGTTATATTTTCCA+TGG | - | chr8_3:67446652-67446671 | Msa1304180:CDS | 25.0% |
! | TAATTTCAGAGATATTTCCA+TGG | + | chr8_3:67446672-67446691 | None:intergenic | 25.0% |
! | CATTAATTAAGCTCCATAAA+GGG | - | chr8_3:67446883-67446902 | Msa1304180:CDS | 25.0% |
! | ATTAATTAAGCTCCATAAAG+GGG | - | chr8_3:67446884-67446903 | Msa1304180:CDS | 25.0% |
!!! | TTTTATTTTAGACCCCTTTA+TGG | + | chr8_3:67446899-67446918 | None:intergenic | 25.0% |
! | AAGAAAAACAAGAAATAAGC+TGG | + | chr8_3:67447174-67447193 | None:intergenic | 25.0% |
!! | TATGCTGAGTTAATTTTTGT+TGG | - | chr8_3:67447230-67447249 | Msa1304180:CDS | 25.0% |
!! | TTTCATACTTTTGGTATTTC+TGG | + | chr8_3:67447364-67447383 | None:intergenic | 25.0% |
!! | CAAAAATGGTTTCATACTTT+TGG | + | chr8_3:67447373-67447392 | None:intergenic | 25.0% |
! | GAAATTCATACTATATTGTG+CGG | - | chr8_3:67447479-67447498 | Msa1304180:CDS | 25.0% |
AAACTCTCAAATCATAACCA+CGG | + | chr8_3:67444195-67444214 | None:intergenic | 30.0% | |
! | GGTTATGATTTGAGAGTTTT+TGG | - | chr8_3:67444196-67444215 | Msa1304180:intron | 30.0% |
CATCATAATGATGAAAGGAA+TGG | - | chr8_3:67444352-67444371 | Msa1304180:intron | 30.0% | |
CATTACCATGATCATAATCT+TGG | + | chr8_3:67444417-67444436 | None:intergenic | 30.0% | |
GAGCATATGCAAAATTATGA+TGG | - | chr8_3:67444580-67444599 | Msa1304180:intron | 30.0% | |
AAAGCATGTTAGATGATGAT+TGG | - | chr8_3:67445082-67445101 | Msa1304180:intron | 30.0% | |
! | TGTTCGTCAAAACTTTTATC+AGG | + | chr8_3:67445228-67445247 | None:intergenic | 30.0% |
AACATAAAAAAGAACAACCG+AGG | - | chr8_3:67445244-67445263 | Msa1304180:intron | 30.0% | |
GTTAATTTCCAACTGTTCTT+TGG | - | chr8_3:67445312-67445331 | Msa1304180:intron | 30.0% | |
TAAGTAAACCAAAGAACAGT+TGG | + | chr8_3:67445323-67445342 | None:intergenic | 30.0% | |
!!! | CTTGTTTTTACTTGCTTTTG+TGG | - | chr8_3:67445555-67445574 | Msa1304180:intron | 30.0% |
ACTGCTTGATCAACTAAAAA+AGG | - | chr8_3:67445614-67445633 | Msa1304180:intron | 30.0% | |
GAATGTTTGATAAATGCGTT+AGG | - | chr8_3:67445797-67445816 | Msa1304180:intron | 30.0% | |
! | TTTTCTCCTCTTTTATGTGT+TGG | - | chr8_3:67445880-67445899 | Msa1304180:intron | 30.0% |
ATGCTTGGAAATAAATGAGA+AGG | + | chr8_3:67446005-67446024 | None:intergenic | 30.0% | |
CAATCTCAAAATTTGATGCT+TGG | + | chr8_3:67446020-67446039 | None:intergenic | 30.0% | |
TAAATTTCACAATGTGGCTT+AGG | - | chr8_3:67446409-67446428 | Msa1304180:CDS | 30.0% | |
!! | TTCTCTTTAAAGTGTTAGCA+CGG | - | chr8_3:67446719-67446738 | Msa1304180:CDS | 30.0% |
GAAAATCAATTGCATGTCAT+TGG | + | chr8_3:67446762-67446781 | None:intergenic | 30.0% | |
CCTTTATGGAGCTTAATTAA+TGG | + | chr8_3:67446885-67446904 | None:intergenic | 30.0% | |
CCATTAATTAAGCTCCATAA+AGG | - | chr8_3:67446882-67446901 | Msa1304180:CDS | 30.0% | |
!!! | TTTTTTGCCACCATAATCTA+TGG | + | chr8_3:67446932-67446951 | None:intergenic | 30.0% |
AGATTATGGTGGCAAAAAAT+TGG | - | chr8_3:67446933-67446952 | Msa1304180:CDS | 30.0% | |
GAAATGCAAAAGTAGCTATT+AGG | - | chr8_3:67446990-67447009 | Msa1304180:CDS | 30.0% | |
! | AAGTGAATTCCTTGTTATCA+AGG | - | chr8_3:67447013-67447032 | Msa1304180:CDS | 30.0% |
! | ATTCCTTGTTATCAAGGAAA+TGG | - | chr8_3:67447019-67447038 | Msa1304180:CDS | 30.0% |
! | TTGATTTGACCTTGTGAATA+TGG | - | chr8_3:67447096-67447115 | Msa1304180:intron | 30.0% |
AAACCAATACCATATTCACA+AGG | + | chr8_3:67447108-67447127 | None:intergenic | 30.0% | |
!! | TTGTGAATATGGTATTGGTT+TGG | - | chr8_3:67447107-67447126 | Msa1304180:intron | 30.0% |
CAAGAAATAAGCTGGATTAT+AGG | + | chr8_3:67447166-67447185 | None:intergenic | 30.0% | |
!!! | GTTAATTTTTGTTGGTTTGC+AGG | - | chr8_3:67447238-67447257 | Msa1304180:CDS | 30.0% |
AAGATGAATCTTACCATACA+TGG | + | chr8_3:67447448-67447467 | None:intergenic | 30.0% | |
TGTATGGTAAGATTCATCTT+TGG | - | chr8_3:67447448-67447467 | Msa1304180:CDS | 30.0% | |
TTGGAAGAGAAAAAGAGTGA+AGG | - | chr8_3:67443673-67443692 | Msa1304180:three_prime_UTR | 35.0% | |
TTGTAACTTTCACAAACCCT+AGG | - | chr8_3:67444062-67444081 | Msa1304180:intron | 35.0% | |
GATGCTATCAACGATATGAA+CGG | - | chr8_3:67444094-67444113 | Msa1304180:intron | 35.0% | |
ATGATGAAAGGAATGGAGAT+TGG | - | chr8_3:67444359-67444378 | Msa1304180:intron | 35.0% | |
TGATGAAAGGAATGGAGATT+GGG | - | chr8_3:67444360-67444379 | Msa1304180:intron | 35.0% | |
! | GATCATGGTAATGAGAAAGA+TGG | - | chr8_3:67444424-67444443 | Msa1304180:intron | 35.0% |
GTAATGAGAAAGATGGATAC+AGG | - | chr8_3:67444431-67444450 | Msa1304180:intron | 35.0% | |
AAAGATGGATACAGGAATAG+AGG | - | chr8_3:67444439-67444458 | Msa1304180:intron | 35.0% | |
GAACACATGCTAGATTATGA+TGG | - | chr8_3:67444673-67444692 | Msa1304180:intron | 35.0% | |
AAAGCATGTTAGATCGTGAT+GGG | - | chr8_3:67444893-67444912 | Msa1304180:intron | 35.0% | |
GATGATGATTGGAATCATGA+CGG | - | chr8_3:67445093-67445112 | Msa1304180:intron | 35.0% | |
AAAATGAACTGGAAAACAGC+AGG | - | chr8_3:67445127-67445146 | Msa1304180:intron | 35.0% | |
AAATGAACTGGAAAACAGCA+GGG | - | chr8_3:67445128-67445147 | Msa1304180:intron | 35.0% | |
ATCCAGACAAAAAGATGGAT+AGG | - | chr8_3:67445193-67445212 | Msa1304180:intron | 35.0% | |
! | ATCCTATCCATCTTTTTGTC+TGG | + | chr8_3:67445198-67445217 | None:intergenic | 35.0% |
ATTCAAACTGCAGGAAAATC+AGG | + | chr8_3:67445368-67445387 | None:intergenic | 35.0% | |
ATTTGTCACATTCAAACTGC+AGG | + | chr8_3:67445377-67445396 | None:intergenic | 35.0% | |
AATAGTCCATCAGATTCCAA+TGG | - | chr8_3:67445400-67445419 | Msa1304180:intron | 35.0% | |
ATAGTCCATCAGATTCCAAT+GGG | - | chr8_3:67445401-67445420 | Msa1304180:intron | 35.0% | |
ATCACATTACCTCATCATTG+TGG | + | chr8_3:67445429-67445448 | None:intergenic | 35.0% | |
! | AAATAAACCGAGACTGATTC+TGG | - | chr8_3:67445521-67445540 | Msa1304180:intron | 35.0% |
AGGTAGAAGATGAATTAGAG+AGG | - | chr8_3:67445583-67445602 | Msa1304180:intron | 35.0% | |
GCTTGATCAACTAAAAAAGG+AGG | - | chr8_3:67445617-67445636 | Msa1304180:intron | 35.0% | |
TCTGAACATGTGCATTTCAA+AGG | - | chr8_3:67445761-67445780 | Msa1304180:intron | 35.0% | |
! | TTAAAGATTAGAGCGCTTGT+TGG | + | chr8_3:67445852-67445871 | None:intergenic | 35.0% |
! | CTGAAAAGTGGAATTTTGTC+AGG | - | chr8_3:67445908-67445927 | Msa1304180:CDS | 35.0% |
! | ATTTTGTCAGGTTTCTAAGC+TGG | - | chr8_3:67445920-67445939 | Msa1304180:CDS | 35.0% |
TGTGTTCAAAGTAAGGATGT+TGG | + | chr8_3:67446055-67446074 | None:intergenic | 35.0% | |
! | CAGCTTTTGTGTTCAAAGTA+AGG | + | chr8_3:67446062-67446081 | None:intergenic | 35.0% |
GAAGATATTTACCGCAGAAA+CGG | - | chr8_3:67446099-67446118 | Msa1304180:CDS | 35.0% | |
AAGATATTTACCGCAGAAAC+GGG | - | chr8_3:67446100-67446119 | Msa1304180:CDS | 35.0% | |
ATATTGCTAACATTGGGCTT+GGG | - | chr8_3:67446229-67446248 | Msa1304180:CDS | 35.0% | |
!!! | ACTGGTTTTAAGTCTTTCTG+TGG | + | chr8_3:67446300-67446319 | None:intergenic | 35.0% |
! | GAAAATTCTCTGCAGTTTTG+TGG | - | chr8_3:67446476-67446495 | Msa1304180:CDS | 35.0% |
!! | TCTCTTTAAAGTGTTAGCAC+GGG | - | chr8_3:67446720-67446739 | Msa1304180:CDS | 35.0% |
CCATAATCTATGGCATAAGA+TGG | + | chr8_3:67446922-67446941 | None:intergenic | 35.0% | |
CCATCTTATGCCATAGATTA+TGG | - | chr8_3:67446919-67446938 | Msa1304180:CDS | 35.0% | |
TCTTATGCCATAGATTATGG+TGG | - | chr8_3:67446922-67446941 | Msa1304180:CDS | 35.0% | |
AGAGATCTTTCAAATCTCAG+GGG | + | chr8_3:67447058-67447077 | None:intergenic | 35.0% | |
CAGAGATCTTTCAAATCTCA+GGG | + | chr8_3:67447059-67447078 | None:intergenic | 35.0% | |
TCAGAGATCTTTCAAATCTC+AGG | + | chr8_3:67447060-67447079 | None:intergenic | 35.0% | |
GAGATTTGAAAGATCTCTGA+TGG | - | chr8_3:67447060-67447079 | Msa1304180:CDS | 35.0% | |
TGACCTTGTGAATATGGTAT+TGG | - | chr8_3:67447102-67447121 | Msa1304180:intron | 35.0% | |
!! | CGTATTTACTTAACTTGTGC+TGG | - | chr8_3:67447202-67447221 | Msa1304180:intron | 35.0% |
TCAATATTGTTCGAGAGTGA+CGG | - | chr8_3:67447272-67447291 | Msa1304180:CDS | 35.0% | |
CTTACAAATGGAAGTCTAGA+TGG | - | chr8_3:67447320-67447339 | Msa1304180:intron | 35.0% | |
GACAACACATGGTACAAAAA+TGG | + | chr8_3:67447387-67447406 | None:intergenic | 35.0% | |
GCAATTAAAGAGACAACACA+TGG | + | chr8_3:67447398-67447417 | None:intergenic | 35.0% | |
TTGTCTCTTTAATTGCCTAG+TGG | - | chr8_3:67447402-67447421 | Msa1304180:intron | 35.0% | |
GTGAGATAGTAAAAACCACT+AGG | + | chr8_3:67447420-67447439 | None:intergenic | 35.0% | |
AAGATTATAGCACTGCTTGT+TGG | + | chr8_3:67447524-67447543 | None:intergenic | 35.0% | |
GGCTGATATGTAGAGAAAAA+AGG | - | chr8_3:67447604-67447623 | Msa1304180:five_prime_UTR | 35.0% | |
ATATGTAGAGAAAAAAGGCC+TGG | - | chr8_3:67447609-67447628 | Msa1304180:five_prime_UTR | 35.0% | |
AGAGTGAAGGAGAAAGACTA+TGG | - | chr8_3:67443686-67443705 | Msa1304180:three_prime_UTR | 40.0% | |
TCAGTTCCACAAAATGACAC+TGG | - | chr8_3:67443760-67443779 | Msa1304180:three_prime_UTR | 40.0% | |
GATGATAGCTCCATTTACGT+TGG | - | chr8_3:67443785-67443804 | Msa1304180:three_prime_UTR | 40.0% | |
AGTGCGAATTGTTTCATCAG+TGG | + | chr8_3:67443828-67443847 | None:intergenic | 40.0% | |
CGCACTGTCTTCAATTTGTA+TGG | - | chr8_3:67443842-67443861 | Msa1304180:three_prime_UTR | 40.0% | |
GACTACCTTGACATCAAGAA+TGG | + | chr8_3:67443870-67443889 | None:intergenic | 40.0% | |
ATCAATGACCAACGTACACT+TGG | - | chr8_3:67444025-67444044 | Msa1304180:CDS | 40.0% | |
TCAATGACCAACGTACACTT+GGG | - | chr8_3:67444026-67444045 | Msa1304180:CDS | 40.0% | |
TAGCATCAATTGCAGACCTA+GGG | + | chr8_3:67444081-67444100 | None:intergenic | 40.0% | |
ATAGCATCAATTGCAGACCT+AGG | + | chr8_3:67444082-67444101 | None:intergenic | 40.0% | |
TGGTAATTATTGTTGTGCCG+TGG | - | chr8_3:67444175-67444194 | Msa1304180:intron | 40.0% | |
GCCGTGTGGTTAAAGTTAAT+GGG | - | chr8_3:67444254-67444273 | Msa1304180:intron | 40.0% | |
CCCCATTAACTTTAACCACA+CGG | + | chr8_3:67444258-67444277 | None:intergenic | 40.0% | |
CCGTGTGGTTAAAGTTAATG+GGG | - | chr8_3:67444255-67444274 | Msa1304180:intron | 40.0% | |
TGGTTAAAGTTAATGGGGTG+AGG | - | chr8_3:67444260-67444279 | Msa1304180:intron | 40.0% | |
! | GTGGTGGCAGATCAAATTTT+GGG | - | chr8_3:67444308-67444327 | Msa1304180:intron | 40.0% |
CGAGACCAAGATTATGATCA+TGG | - | chr8_3:67444409-67444428 | Msa1304180:intron | 40.0% | |
TTCTATCCCTATCCCTATCA+TGG | + | chr8_3:67444555-67444574 | None:intergenic | 40.0% | |
AAAGCATGTTAGTCCGTGAT+AGG | - | chr8_3:67444614-67444633 | Msa1304180:intron | 40.0% | |
CAAGCTAGAGCAAGTATGTT+AGG | - | chr8_3:67444697-67444716 | Msa1304180:intron | 40.0% | |
TTCTATCCCTATCCCTATCA+TGG | + | chr8_3:67444555-67444574 | None:intergenic | 40.0% | |
! | CAACTTTTATACCCCTGTCA+CGG | + | chr8_3:67444840-67444859 | None:intergenic | 40.0% |
! | GAAAGCATGTTAGATCGTGA+TGG | - | chr8_3:67444892-67444911 | Msa1304180:intron | 40.0% |
TTCTACTCCTATCTCTGTCA+CGG | + | chr8_3:67444927-67444946 | None:intergenic | 40.0% | |
AGAAGAGTTGAGCATTTGCA+AGG | - | chr8_3:67444943-67444962 | Msa1304180:intron | 40.0% | |
TATCCCTAACCATGATGTCA+CGG | + | chr8_3:67445020-67445039 | None:intergenic | 40.0% | |
ATTGGAATCATGACGGTGAT+AGG | - | chr8_3:67445100-67445119 | Msa1304180:intron | 40.0% | |
TTGGAATCATGACGGTGATA+GGG | - | chr8_3:67445101-67445120 | Msa1304180:intron | 40.0% | |
TGATAGGGCTGAAAATGAAC+TGG | - | chr8_3:67445116-67445135 | Msa1304180:intron | 40.0% | |
TAAGGACCGTAACTTAGATG+TGG | - | chr8_3:67445170-67445189 | Msa1304180:CDS | 40.0% | |
CTGGATCCACATCTAAGTTA+CGG | + | chr8_3:67445179-67445198 | None:intergenic | 40.0% | |
TGTGGATCCAGACAAAAAGA+TGG | - | chr8_3:67445188-67445207 | Msa1304180:CDS | 40.0% | |
TCTTACTCGATGTTTCTCCT+CGG | + | chr8_3:67445264-67445283 | None:intergenic | 40.0% | |
TAGTCCATCAGATTCCAATG+GGG | - | chr8_3:67445402-67445421 | Msa1304180:intron | 40.0% | |
AAATGTGCCAGAATCAGTCT+CGG | + | chr8_3:67445531-67445550 | None:intergenic | 40.0% | |
!! | TACTTGCTTTTGTGGTCTTC+AGG | - | chr8_3:67445563-67445582 | Msa1304180:intron | 40.0% |
! | TCTCCTCTTTTATGTGTTGG+TGG | - | chr8_3:67445883-67445902 | Msa1304180:intron | 40.0% |
!! | GGAGTTACAAAAGCACTCTA+AGG | - | chr8_3:67445977-67445996 | Msa1304180:intron | 40.0% |
GATATTGCTAACATTGGGCT+TGG | - | chr8_3:67446228-67446247 | Msa1304180:CDS | 40.0% | |
AGAAAACATTCATGCAGCTG+AGG | + | chr8_3:67446263-67446282 | None:intergenic | 40.0% | |
AACCAGTGAAAAAGAACTCC+AGG | - | chr8_3:67446313-67446332 | Msa1304180:CDS | 40.0% | |
!! | AACCTGGAGTTCTTTTTCAC+TGG | + | chr8_3:67446318-67446337 | None:intergenic | 40.0% |
TATATGGTGCAGTTGTATGC+AGG | - | chr8_3:67446576-67446595 | Msa1304180:CDS | 40.0% | |
! | GCACGGGTATTTGTATTTTG+AGG | - | chr8_3:67446736-67446755 | Msa1304180:CDS | 40.0% |
ACTTATGCGCGAAGTTGTAA+TGG | - | chr8_3:67446968-67446987 | Msa1304180:CDS | 40.0% | |
! | CAGCCATTTCCTTGATAACA+AGG | + | chr8_3:67447025-67447044 | None:intergenic | 40.0% |
GGTCTTGGACAACTTACAAA+TGG | - | chr8_3:67447308-67447327 | Msa1304180:intron | 40.0% | |
TATCTCACTAGCTCCATGTA+TGG | - | chr8_3:67447432-67447451 | Msa1304180:intron | 40.0% | |
TTAGCATATGGCATCTTACC+TGG | - | chr8_3:67447582-67447601 | Msa1304180:five_prime_UTR | 40.0% | |
TAGCATATGGCATCTTACCT+GGG | - | chr8_3:67447583-67447602 | Msa1304180:five_prime_UTR | 40.0% | |
! | TTTTCTCTACATATCAGCCC+AGG | + | chr8_3:67447603-67447622 | None:intergenic | 40.0% |
!!! | CATCGTCCAGTGTCATTTTG+TGG | + | chr8_3:67443769-67443788 | None:intergenic | 45.0% |
GATAGCTCCATTTACGTTGG+TGG | - | chr8_3:67443788-67443807 | Msa1304180:three_prime_UTR | 45.0% | |
AGCATTTCCCAAGTGTACGT+TGG | + | chr8_3:67444036-67444055 | None:intergenic | 45.0% | |
TCAGACTATTAATGGCCGTG+TGG | - | chr8_3:67444240-67444259 | Msa1304180:intron | 45.0% | |
GGCCGTGTGGTTAAAGTTAA+TGG | - | chr8_3:67444253-67444272 | Msa1304180:intron | 45.0% | |
!! | GGTGGTGGCAGATCAAATTT+TGG | - | chr8_3:67444307-67444326 | Msa1304180:intron | 45.0% |
ACAGGAATAGAGGCAGTGAT+TGG | - | chr8_3:67444449-67444468 | Msa1304180:intron | 45.0% | |
ATAGGTCTCGAGACCATGAT+AGG | - | chr8_3:67444539-67444558 | Msa1304180:intron | 45.0% | |
TAGGTCTCGAGACCATGATA+GGG | - | chr8_3:67444540-67444559 | Msa1304180:intron | 45.0% | |
TCGAGACCATGATAGGGATA+GGG | - | chr8_3:67444546-67444565 | Msa1304180:intron | 45.0% | |
TTCTATCCCTATCCCTGTCA+CGG | + | chr8_3:67444648-67444667 | None:intergenic | 45.0% | |
ATAGATCCCGAGACCATGAT+AGG | - | chr8_3:67444725-67444744 | Msa1304180:intron | 45.0% | |
TAGATCCCGAGACCATGATA+GGG | - | chr8_3:67444726-67444745 | Msa1304180:intron | 45.0% | |
AAAGCATGTTAGACCGCGAT+GGG | - | chr8_3:67444986-67445005 | Msa1304180:intron | 45.0% | |
TAACCATGATGTCACGGTCT+CGG | + | chr8_3:67445014-67445033 | None:intergenic | 45.0% | |
AGACCGTGACATCATGGTTA+GGG | - | chr8_3:67445014-67445033 | Msa1304180:CDS | 45.0% | |
GCACCACCAACACATAAAAG+AGG | + | chr8_3:67445889-67445908 | None:intergenic | 45.0% | |
TCAGGTTTCTAAGCTGGAAG+AGG | - | chr8_3:67445926-67445945 | Msa1304180:CDS | 45.0% | |
CAGGTTTCTAAGCTGGAAGA+GGG | - | chr8_3:67445927-67445946 | Msa1304180:CDS | 45.0% | |
TTCTAAGCTGGAAGAGGGAT+TGG | - | chr8_3:67445932-67445951 | Msa1304180:intron | 45.0% | |
ATATTTACCGCAGAAACGGG+AGG | - | chr8_3:67446103-67446122 | Msa1304180:CDS | 45.0% | |
TTACCTTGGTCAACTGCATC+TGG | + | chr8_3:67446166-67446185 | None:intergenic | 45.0% | |
!! | TAAAAAAAAATACAATAATA+TGG | + | chr8_3:67444136-67444155 | None:intergenic | 5.0% |
!! | AAAGTAAAATTAATAATAAA+TGG | + | chr8_3:67446510-67446529 | None:intergenic | 5.0% |
GGGAAGACCACCAACGTAAA+TGG | + | chr8_3:67443798-67443817 | None:intergenic | 50.0% | |
! | GTTTCATCAGTGGCGTCGAA+GGG | + | chr8_3:67443818-67443837 | None:intergenic | 50.0% |
! | TGTTTCATCAGTGGCGTCGA+AGG | + | chr8_3:67443819-67443838 | None:intergenic | 50.0% |
TGGCGCCATTCTTGATGTCA+AGG | - | chr8_3:67443862-67443881 | Msa1304180:three_prime_UTR | 50.0% | |
AGGAATGGAGATTGGGATCG+TGG | - | chr8_3:67444367-67444386 | Msa1304180:intron | 50.0% | |
AATGGAGATTGGGATCGTGG+CGG | - | chr8_3:67444370-67444389 | Msa1304180:intron | 50.0% | |
ATTGGACCAGAGGTGGTGAT+TGG | - | chr8_3:67444467-67444486 | Msa1304180:intron | 50.0% | |
ATTGGACTCGACAGCATCAG+AGG | - | chr8_3:67444485-67444504 | Msa1304180:intron | 50.0% | |
CATGGTCTCGAGACCTATCA+CGG | + | chr8_3:67444537-67444556 | None:intergenic | 50.0% | |
CTCGAGACCATGATAGGGAT+AGG | - | chr8_3:67444545-67444564 | Msa1304180:intron | 50.0% | |
CCTATCCCTATCATGGTCTC+GGG | + | chr8_3:67444548-67444567 | None:intergenic | 50.0% | |
CCCTATCCCTATCATGGTCT+CGG | + | chr8_3:67444549-67444568 | None:intergenic | 50.0% | |
CCGAGACCATGATAGGGATA+GGG | - | chr8_3:67444732-67444751 | Msa1304180:intron | 50.0% | |
AAAGCGCGTTAGACCGTGAT+AGG | - | chr8_3:67444800-67444819 | Msa1304180:intron | 50.0% | |
TTATACCCCTGTCACGGTCA+CGG | + | chr8_3:67444834-67444853 | None:intergenic | 50.0% | |
TCCTATCTCTGTCACGGTCT+CGG | + | chr8_3:67444921-67444940 | None:intergenic | 50.0% | |
! | GAAAGCATGTTAGACCGCGA+TGG | - | chr8_3:67444985-67445004 | Msa1304180:intron | 50.0% |
AACCATGATGTCACGGTCTC+GGG | + | chr8_3:67445013-67445032 | None:intergenic | 50.0% | |
GAGACCGTGACATCATGGTT+AGG | - | chr8_3:67445013-67445032 | Msa1304180:CDS | 50.0% | |
ACTGGAAAACAGCAGGGTAC+AGG | - | chr8_3:67445134-67445153 | Msa1304180:intron | 50.0% | |
CTGGAAAACAGCAGGGTACA+GGG | - | chr8_3:67445135-67445154 | Msa1304180:intron | 50.0% | |
ACAGGGTGGAGATGTGGATA+AGG | - | chr8_3:67445152-67445171 | Msa1304180:CDS | 50.0% | |
TGGTCCCCATTGGAATCTGA+TGG | + | chr8_3:67445409-67445428 | None:intergenic | 50.0% | |
CTCATCATTGTGGTCCCCAT+TGG | + | chr8_3:67445419-67445438 | None:intergenic | 50.0% | |
CAATGGGGACCACAATGATG+AGG | - | chr8_3:67445417-67445436 | Msa1304180:intron | 50.0% | |
! | ATGGCGATGTCTGCTCTAGA+AGG | - | chr8_3:67445690-67445709 | Msa1304180:CDS | 50.0% |
!! | GTGTTGGTGGTGCTGAAAAG+TGG | - | chr8_3:67445896-67445915 | Msa1304180:CDS | 50.0% |
TTGTTCGAGAGTGACGGTGA+TGG | - | chr8_3:67447278-67447297 | Msa1304180:CDS | 50.0% | |
GTTAATGGGGTGAGGTCTCG+TGG | - | chr8_3:67444268-67444287 | Msa1304180:intron | 55.0% | |
AGAGGCAGTGATTGGACCAG+AGG | - | chr8_3:67444457-67444476 | Msa1304180:intron | 55.0% | |
TCGAGTCCAATCACCACCTC+TGG | + | chr8_3:67444476-67444495 | None:intergenic | 55.0% | |
AGAGGTCTCGAGACCGTGAT+AGG | - | chr8_3:67444503-67444522 | Msa1304180:intron | 55.0% | |
CCCGAGACCATGATAGGGAT+AGG | - | chr8_3:67444731-67444750 | Msa1304180:intron | 55.0% | |
CCTATCTCTGTCACGGTCTC+GGG | + | chr8_3:67444920-67444939 | None:intergenic | 55.0% | |
GAAAACAGCAGGGTACAGGG+TGG | - | chr8_3:67445138-67445157 | Msa1304180:intron | 55.0% | |
ACAGCATCCTCCCGTTTCTG+CGG | + | chr8_3:67446113-67446132 | None:intergenic | 55.0% | |
TCGCCAGATGCAGTTGACCA+AGG | - | chr8_3:67446160-67446179 | Msa1304180:CDS | 55.0% | |
! | GAGAGTGACGGTGATGGTGA+TGG | - | chr8_3:67447284-67447303 | Msa1304180:CDS | 55.0% |
!! | AGTGACGGTGATGGTGATGG+TGG | - | chr8_3:67447287-67447306 | Msa1304180:intron | 55.0% |
!! | GGTGATGGTGATGGTGGTCT+TGG | - | chr8_3:67447293-67447312 | Msa1304180:intron | 55.0% |
AATGGGGTGAGGTCTCGTGG+CGG | - | chr8_3:67444271-67444290 | Msa1304180:intron | 60.0% | |
GGCAGTGATTGGACCAGAGG+TGG | - | chr8_3:67444460-67444479 | Msa1304180:intron | 60.0% | |
ATAGGTCCCGCGACCGTGAT+AGG | - | chr8_3:67444521-67444540 | Msa1304180:intron | 60.0% | |
TCGAGACCTATCACGGTCGC+GGG | + | chr8_3:67444530-67444549 | None:intergenic | 60.0% | |
CTCGAGACCTATCACGGTCG+CGG | + | chr8_3:67444531-67444550 | None:intergenic | 60.0% | |
CACGGTCTCGGGACCTATCA+CGG | + | chr8_3:67444630-67444649 | None:intergenic | 60.0% | |
ATAGGTCCCGAGACCGTGAC+AGG | - | chr8_3:67444632-67444651 | Msa1304180:intron | 60.0% | |
TAGGTCCCGAGACCGTGACA+GGG | - | chr8_3:67444633-67444652 | Msa1304180:intron | 60.0% | |
CCTATCCCTGTCACGGTCTC+GGG | + | chr8_3:67444641-67444660 | None:intergenic | 60.0% | |
CCCTATCCCTGTCACGGTCT+CGG | + | chr8_3:67444642-67444661 | None:intergenic | 60.0% | |
CCGAGACCGTGACAGGGATA+GGG | - | chr8_3:67444639-67444658 | Msa1304180:intron | 60.0% | |
CACGGTCTCGGGACCTATCA+CGG | + | chr8_3:67444630-67444649 | None:intergenic | 60.0% | |
CCCGAGACCGTGACAGAGAT+AGG | - | chr8_3:67444917-67444936 | Msa1304180:intron | 60.0% | |
GTCCCGAGACCGTGACATCA+TGG | - | chr8_3:67445008-67445027 | Msa1304180:CDS | 60.0% | |
CAGGGTACAGGGTGGAGATG+TGG | - | chr8_3:67445146-67445165 | Msa1304180:CDS | 60.0% | |
CACGGTCGCGGGACCTATCA+CGG | + | chr8_3:67444519-67444538 | None:intergenic | 65.0% | |
CCCGAGACCGTGACAGGGAT+AGG | - | chr8_3:67444638-67444657 | Msa1304180:intron | 65.0% | |
CCTGTCACGGTCACGGTCTC+GGG | + | chr8_3:67444827-67444846 | None:intergenic | 65.0% | |
CCCTGTCACGGTCACGGTCT+CGG | + | chr8_3:67444828-67444847 | None:intergenic | 65.0% | |
CCGAGACCGTGACCGTGACA+GGG | - | chr8_3:67444825-67444844 | Msa1304180:intron | 65.0% | |
CGAGACCGTGACCGTGACAG+GGG | - | chr8_3:67444826-67444845 | Msa1304180:intron | 65.0% | |
GTGAGGTCTCGTGGCGGTGG+AGG | - | chr8_3:67444277-67444296 | Msa1304180:intron | 70.0% | |
AGGTCTCGTGGCGGTGGAGG+TGG | - | chr8_3:67444280-67444299 | Msa1304180:intron | 70.0% | |
TCTCGTGGCGGTGGAGGTGG+CGG | - | chr8_3:67444283-67444302 | Msa1304180:intron | 70.0% | |
CCCGAGACCGTGACCGTGAC+AGG | - | chr8_3:67444824-67444843 | Msa1304180:intron | 70.0% | |
CACGGTCTCGGGACCCATCG+CGG | + | chr8_3:67445002-67445021 | None:intergenic | 70.0% | |
GGGGTGAGGTCTCGTGGCGG+TGG | - | chr8_3:67444274-67444293 | Msa1304180:intron | 75.0% | |
! | GGTGGAGGTGGCGGTGGTGG+TGG | - | chr8_3:67444292-67444311 | Msa1304180:intron | 75.0% |
!! | CGTGGCGGTGGAGGTGGCGG+TGG | - | chr8_3:67444286-67444305 | Msa1304180:intron | 80.0% |
!! | GGCGGTGGAGGTGGCGGTGG+TGG | - | chr8_3:67444289-67444308 | Msa1304180:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 67443667 | 67447660 | 67443667 | ID=Msa1304180;Name=Msa1304180 |
chr8_3 | mRNA | 67443667 | 67447660 | 67443667 | ID=Msa1304180-mRNA-1;Parent=Msa1304180;Name=Msa1304180-mRNA-1;_AED=0.11;_eAED=0.11;_QI=106|1|0.88|1|1|1|9|311|549 |
chr8_3 | exon | 67443667 | 67444067 | 67443667 | ID=Msa1304180-mRNA-1:exon:20710;Parent=Msa1304180-mRNA-1 |
chr8_3 | exon | 67444993 | 67445061 | 67444993 | ID=Msa1304180-mRNA-1:exon:20709;Parent=Msa1304180-mRNA-1 |
chr8_3 | exon | 67445146 | 67445211 | 67445146 | ID=Msa1304180-mRNA-1:exon:20708;Parent=Msa1304180-mRNA-1 |
chr8_3 | exon | 67445329 | 67445397 | 67445329 | ID=Msa1304180-mRNA-1:exon:20707;Parent=Msa1304180-mRNA-1 |
chr8_3 | exon | 67445689 | 67445742 | 67445689 | ID=Msa1304180-mRNA-1:exon:20706;Parent=Msa1304180-mRNA-1 |
chr8_3 | exon | 67445889 | 67445946 | 67445889 | ID=Msa1304180-mRNA-1:exon:20705;Parent=Msa1304180-mRNA-1 |
chr8_3 | exon | 67446050 | 67447083 | 67446050 | ID=Msa1304180-mRNA-1:exon:20704;Parent=Msa1304180-mRNA-1 |
chr8_3 | exon | 67447207 | 67447305 | 67447207 | ID=Msa1304180-mRNA-1:exon:20703;Parent=Msa1304180-mRNA-1 |
chr8_3 | exon | 67447444 | 67447660 | 67447444 | ID=Msa1304180-mRNA-1:exon:20702;Parent=Msa1304180-mRNA-1 |
chr8_3 | five_prime_UTR | 67447555 | 67447660 | 67447555 | ID=Msa1304180-mRNA-1:five_prime_utr;Parent=Msa1304180-mRNA-1 |
chr8_3 | CDS | 67447444 | 67447554 | 67447444 | ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1 |
chr8_3 | CDS | 67447207 | 67447305 | 67447207 | ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1 |
chr8_3 | CDS | 67446050 | 67447083 | 67446050 | ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1 |
chr8_3 | CDS | 67445889 | 67445946 | 67445889 | ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1 |
chr8_3 | CDS | 67445689 | 67445742 | 67445689 | ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1 |
chr8_3 | CDS | 67445329 | 67445397 | 67445329 | ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1 |
chr8_3 | CDS | 67445146 | 67445211 | 67445146 | ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1 |
chr8_3 | CDS | 67444993 | 67445061 | 67444993 | ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1 |
chr8_3 | CDS | 67443978 | 67444067 | 67443978 | ID=Msa1304180-mRNA-1:cds;Parent=Msa1304180-mRNA-1 |
chr8_3 | three_prime_UTR | 67443667 | 67443977 | 67443667 | ID=Msa1304180-mRNA-1:three_prime_utr;Parent=Msa1304180-mRNA-1 |
Gene Sequence |
Protein sequence |