Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023180 | sp|Q8S4R4|CRTSO_SOLLC | 81.495 | 562 | 101 | 1 | 38 | 596 | 54 | 615 | 0.0 | 949 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023180 | Msa0030400 | 0.809413 | 1.915992e-50 | -8.615850e-47 |
| Msa0023180 | Msa0035110 | 0.828778 | 7.439948e-55 | -8.615850e-47 |
| Msa0023180 | Msa0045660 | 0.804652 | 1.949249e-49 | -8.615850e-47 |
| Msa0023180 | Msa0070740 | 0.839003 | 2.055104e-57 | -8.615850e-47 |
| Msa0023180 | Msa0071010 | 0.872985 | 2.087077e-67 | -8.615850e-47 |
| Msa0023180 | Msa0091340 | 0.836200 | 1.075870e-56 | -8.615850e-47 |
| Msa0023180 | Msa0093440 | 0.813806 | 2.123709e-51 | -8.615850e-47 |
| Msa0023180 | Msa0175920 | 0.821537 | 3.830753e-53 | -8.615850e-47 |
| Msa0023180 | Msa0241580 | 0.821429 | 4.056012e-53 | -8.615850e-47 |
| Msa0023180 | Msa0251140 | 0.803293 | 3.736099e-49 | -8.615850e-47 |
| Msa0023180 | Msa0279490 | 0.813890 | 2.035222e-51 | -8.615850e-47 |
| Msa0023180 | Msa0309670 | 0.823025 | 1.729556e-53 | -8.615850e-47 |
| Msa0023180 | Msa0319090 | 0.837083 | 6.408177e-57 | -8.615850e-47 |
| Msa0023180 | Msa0357090 | 0.805368 | 1.380626e-49 | -8.615850e-47 |
| Msa0023180 | Msa0357100 | 0.822694 | 2.065804e-53 | -8.615850e-47 |
| Msa0023180 | Msa0358420 | -0.820036 | 8.478771e-53 | -8.615850e-47 |
| Msa0023180 | Msa0408410 | 0.832087 | 1.154672e-55 | -8.615850e-47 |
| Msa0023180 | Msa0416000 | 0.817004 | 4.129348e-52 | -8.615850e-47 |
| Msa0023180 | Msa0438440 | 0.815811 | 7.636037e-52 | -8.615850e-47 |
| Msa0023180 | Msa0440110 | 0.801852 | 7.406443e-49 | -8.615850e-47 |
| Msa0023180 | Msa0501470 | 0.800473 | 1.417596e-48 | -8.615850e-47 |
| Msa0023180 | Msa0549740 | 0.800875 | 1.173898e-48 | -8.615850e-47 |
| Msa0023180 | Msa0569290 | 0.801740 | 7.806237e-49 | -8.615850e-47 |
| Msa0023180 | Msa0571250 | 0.823824 | 1.124686e-53 | -8.615850e-47 |
| Msa0023180 | Msa0573970 | 0.802146 | 6.444167e-49 | -8.615850e-47 |
| Msa0023180 | Msa0583930 | 0.808869 | 2.505893e-50 | -8.615850e-47 |
| Msa0023180 | Msa0583940 | 0.801794 | 7.611227e-49 | -8.615850e-47 |
| Msa0023180 | Msa0607440 | 0.803265 | 3.786261e-49 | -8.615850e-47 |
| Msa0023180 | Msa0617560 | -0.803425 | 3.507305e-49 | -8.615850e-47 |
| Msa0023180 | Msa0622690 | 0.806861 | 6.696771e-50 | -8.615850e-47 |
| Msa0023180 | Msa0650360 | 0.807790 | 4.254424e-50 | -8.615850e-47 |
| Msa0023180 | Msa0660880 | -0.803428 | 3.503092e-49 | -8.615850e-47 |
| Msa0023180 | Msa0685880 | 0.809682 | 1.676910e-50 | -8.615850e-47 |
| Msa0023180 | Msa0716740 | -0.801686 | 8.009518e-49 | -8.615850e-47 |
| Msa0023180 | Msa0799290 | -0.812638 | 3.833180e-51 | -8.615850e-47 |
| Msa0023180 | Msa0814780 | 0.802025 | 6.823855e-49 | -8.615850e-47 |
| Msa0023180 | Msa0829430 | 0.815309 | 9.873557e-52 | -8.615850e-47 |
| Msa0023180 | Msa0837510 | -0.809973 | 1.451858e-50 | -8.615850e-47 |
| Msa0023180 | Msa0883350 | 0.801346 | 9.403670e-49 | -8.615850e-47 |
| Msa0023180 | Msa0883410 | 0.817665 | 2.931694e-52 | -8.615850e-47 |
| Msa0023180 | Msa0883660 | 0.804207 | 2.413123e-49 | -8.615850e-47 |
| Msa0023180 | Msa0883670 | 0.806788 | 6.938682e-50 | -8.615850e-47 |
| Msa0023180 | Msa0887000 | 0.804214 | 2.405749e-49 | -8.615850e-47 |
| Msa0023180 | Msa0929400 | 0.808073 | 3.704864e-50 | -8.615850e-47 |
| Msa0023180 | Msa1008340 | 0.800759 | 1.239825e-48 | -8.615850e-47 |
| Msa0023180 | Msa1032430 | 0.825845 | 3.753971e-54 | -8.615850e-47 |
| Msa0023180 | Msa1087530 | 0.809186 | 2.143192e-50 | -8.615850e-47 |
| Msa0023180 | Msa1118120 | 0.810274 | 1.250457e-50 | -8.615850e-47 |
| Msa0023180 | Msa1151970 | 0.847981 | 8.195878e-60 | -8.615850e-47 |
| Msa0023180 | Msa1161760 | 0.811860 | 5.667985e-51 | -8.615850e-47 |
| Msa0023180 | Msa1182400 | 0.802530 | 5.371067e-49 | -8.615850e-47 |
| Msa0023180 | Msa1184740 | 0.812034 | 5.194584e-51 | -8.615850e-47 |
| Msa0023180 | Msa1191390 | 0.805184 | 1.509115e-49 | -8.615850e-47 |
| Msa0023180 | Msa1228880 | 0.808088 | 3.677974e-50 | -8.615850e-47 |
| Msa0023180 | Msa1247720 | 0.808339 | 3.251146e-50 | -8.615850e-47 |
| Msa0023180 | Msa1279330 | 0.815542 | 8.762720e-52 | -8.615850e-47 |
| Msa0023180 | Msa1352040 | 0.802107 | 6.564435e-49 | -8.615850e-47 |
| Msa0023180 | Msa1352060 | 0.802632 | 5.116846e-49 | -8.615850e-47 |
| Msa0023180 | Msa1365120 | 0.808753 | 2.652679e-50 | -8.615850e-47 |
| Msa0023180 | Msa1371840 | 0.807411 | 5.120692e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023180 | MtrunA17_Chr1g0176461 | 96.812 | 596 | 19 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1192 |
| Msa0023180 | MtrunA17_Chr0c12g0493641 | 31.952 | 579 | 324 | 23 | 42 | 584 | 38 | 582 | 1.79e-63 | 219 |
| Msa0023180 | MtrunA17_Chr4g0077041 | 36.667 | 210 | 122 | 7 | 354 | 557 | 26 | 230 | 5.29e-34 | 129 |
| Msa0023180 | MtrunA17_Chr1g0162681 | 23.191 | 539 | 338 | 19 | 79 | 555 | 23 | 547 | 3.63e-13 | 72.4 |
| Msa0023180 | MtrunA17_Chr8g0373291 | 23.971 | 559 | 344 | 18 | 79 | 572 | 22 | 564 | 6.30e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023180 | AT1G06820.1 | 87.849 | 502 | 61 | 0 | 79 | 580 | 78 | 579 | 0.0 | 922 |
| Msa0023180 | AT1G06820.3 | 86.588 | 507 | 66 | 1 | 79 | 585 | 78 | 582 | 0.0 | 913 |
| Msa0023180 | AT1G06820.4 | 87.330 | 442 | 56 | 0 | 139 | 580 | 19 | 460 | 0.0 | 814 |
| Msa0023180 | AT1G06820.2 | 87.204 | 422 | 54 | 0 | 79 | 500 | 78 | 499 | 0.0 | 766 |
| Msa0023180 | AT1G57770.1 | 31.343 | 536 | 324 | 18 | 80 | 586 | 54 | 574 | 6.75e-60 | 209 |
| Msa0023180 | AT5G49555.1 | 22.719 | 559 | 348 | 18 | 79 | 572 | 14 | 553 | 1.97e-15 | 80.1 |
Find 166 sgRNAs with CRISPR-Local
Find 465 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGATTGGTGGGTTGGTTGC+TGG | 0.141035 | 1_1:-44130345 | Msa0023180:CDS |
| GTTATACCTGGTGGAAGTTC+TGG | 0.145592 | 1_1:-44130273 | Msa0023180:CDS |
| AGCTGCATAGAATCCGATTT+TGG | 0.213653 | 1_1:-44124577 | Msa0023180:three_prime_UTR |
| TGAAAGTTCTCTTCCTCTTT+TGG | 0.238566 | 1_1:+44126535 | None:intergenic |
| AGCATTTGATATTACGGTTT+TGG | 0.254832 | 1_1:+44126723 | None:intergenic |
| GGGTTTGATGCAATTGTTAT+TGG | 0.272864 | 1_1:-44130372 | Msa0023180:CDS |
| ATTGTAGGAAAGTTAGTAAA+AGG | 0.297392 | 1_1:-44126568 | Msa0023180:intron |
| TGGGTCTGGGATTGGTGGGT+TGG | 0.303657 | 1_1:-44130352 | Msa0023180:CDS |
| GTGGGATTAACTACCCTCTT+GGG | 0.310382 | 1_1:-44126978 | Msa0023180:CDS |
| TATATTCACAACTTCTTCAA+TGG | 0.321714 | 1_1:-44126220 | Msa0023180:CDS |
| CAAATGGTGGTAGAAGAAAA+AGG | 0.322612 | 1_1:-44130473 | Msa0023180:CDS |
| GGATTGGTGGGTTGGTTGCT+GGG | 0.332135 | 1_1:-44130344 | Msa0023180:CDS |
| TACAAGTATAACTCTTTGTT+TGG | 0.332488 | 1_1:+44124495 | None:intergenic |
| GATGCAATTGTTATTGGGTC+TGG | 0.348955 | 1_1:-44130366 | Msa0023180:CDS |
| GCCCGTGACGAGGGTACTTA+TGG | 0.350068 | 1_1:-44125606 | Msa0023180:CDS |
| TCTGGTAGCATTTGATATTA+CGG | 0.350827 | 1_1:+44126717 | None:intergenic |
| GGTTTGATGCAATTGTTATT+GGG | 0.352695 | 1_1:-44130371 | Msa0023180:CDS |
| GGCATGCTGCTTGGGTTGCT+TGG | 0.354118 | 1_1:-44124888 | Msa0023180:CDS |
| CAACTACCTCAAGCACAAAA+TGG | 0.357692 | 1_1:+44126428 | None:intergenic |
| TTGTTTGGATAAAAGAAAAC+TGG | 0.361173 | 1_1:+44124510 | None:intergenic |
| CCAGTTGAATGCTTGACATT+AGG | 0.362918 | 1_1:-44128602 | Msa0023180:intron |
| CTAGAACAATTGGACCAGTT+TGG | 0.364549 | 1_1:-44126325 | Msa0023180:intron |
| TGCTGCTTGGGTTGCTTGGT+TGG | 0.365552 | 1_1:-44124884 | Msa0023180:CDS |
| GTTGGCTCTTCTGTTATGTT+TGG | 0.367913 | 1_1:-44130219 | Msa0023180:CDS |
| CATCGAGTAGCTGCAGATAT+TGG | 0.371399 | 1_1:-44125332 | Msa0023180:intron |
| GGCAAAAGGTCTAGTTGATC+AGG | 0.375101 | 1_1:-44126929 | Msa0023180:CDS |
| GGGTGTGATGGTAGATGATG+GGG | 0.379033 | 1_1:+44130565 | None:intergenic |
| TTATACCTGGTGGAAGTTCT+GGG | 0.379439 | 1_1:-44130272 | Msa0023180:CDS |
| GTTATTGCTGTAGCTTTCTC+AGG | 0.379480 | 1_1:-44125368 | Msa0023180:CDS |
| AAGTATCGTCGATGTGTCTT+AGG | 0.386513 | 1_1:+44125630 | None:intergenic |
| GAAGGTAAAGATTGAAACTT+TGG | 0.388568 | 1_1:+44130537 | None:intergenic |
| AGCATTCCAAAGGGGTTGTT+AGG | 0.391726 | 1_1:-44125570 | Msa0023180:CDS |
| ATTGTTATTGGGTCTGGGAT+TGG | 0.392967 | 1_1:-44130360 | Msa0023180:CDS |
| TTAGAGAAGAAATTGTTTCC+AGG | 0.395116 | 1_1:-44125952 | Msa0023180:CDS |
| TCTTTACCTTCATGTAGCTT+TGG | 0.398304 | 1_1:-44130525 | Msa0023180:CDS |
| AGCATTCACCATAAAATTTG+AGG | 0.398663 | 1_1:+44128809 | None:intergenic |
| TGAAGGATATGACGACCTTC+AGG | 0.399654 | 1_1:+44126243 | None:intergenic |
| TGTGAAAGGTGCAAAAGTTT+TGG | 0.400396 | 1_1:-44130310 | Msa0023180:CDS |
| TTATTGGGTCTGGGATTGGT+GGG | 0.401354 | 1_1:-44130356 | Msa0023180:CDS |
| AAACTTACGGTTGTGTTAAA+CGG | 0.405692 | 1_1:+44125543 | None:intergenic |
| GTTGGAGACAGTTGCTTCCC+TGG | 0.408956 | 1_1:-44125398 | Msa0023180:CDS |
| ATGCAATTGTTATTGGGTCT+GGG | 0.415335 | 1_1:-44130365 | Msa0023180:CDS |
| GGCATTCCTAACAACCCCTT+TGG | 0.415481 | 1_1:+44125564 | None:intergenic |
| TCCATATGGTTCCTCCAAAC+TGG | 0.419387 | 1_1:+44126311 | None:intergenic |
| TATTATTTGCCTCAAAATGC+TGG | 0.423282 | 1_1:-44127847 | Msa0023180:CDS |
| TTTGGAATGCTGCGTGGCAT+TGG | 0.424414 | 1_1:+44125582 | None:intergenic |
| TATGTTTGGTTTCAGTGATA+AGG | 0.426067 | 1_1:-44130205 | Msa0023180:intron |
| CATAGCCAGGAAGTATATTC+AGG | 0.427849 | 1_1:-44127821 | Msa0023180:CDS |
| GCTACCAGATGGGACACATT+TGG | 0.431536 | 1_1:-44126703 | Msa0023180:intron |
| AGCAGCATGCCGTCCAAAAC+AGG | 0.432079 | 1_1:+44124900 | None:intergenic |
| TGGATCCTGAATATACTTCC+TGG | 0.432364 | 1_1:+44127816 | None:intergenic |
| GTTATTGGGTCTGGGATTGG+TGG | 0.434710 | 1_1:-44130357 | Msa0023180:CDS |
| TAATGCCATGAAAATGATAA+TGG | 0.437425 | 1_1:+44130701 | None:intergenic |
| TGGTTAGAAACAGAGAGTAT+AGG | 0.440284 | 1_1:+44130591 | None:intergenic |
| ACTTGCTTTCAGAGCATAGA+TGG | 0.443465 | 1_1:-44125431 | Msa0023180:intron |
| TGGTACTTATCTAGAACAAT+TGG | 0.444078 | 1_1:-44126335 | Msa0023180:intron |
| CTAACCAAATGTGTCCCATC+TGG | 0.445008 | 1_1:+44126699 | None:intergenic |
| GGGGTGTGATGGTAGATGAT+GGG | 0.445186 | 1_1:+44130564 | None:intergenic |
| ACACACAATATCAATGTAGA+TGG | 0.445616 | 1_1:-44124425 | Msa0023180:three_prime_UTR |
| GGTGGGATTAACTACCCTCT+TGG | 0.447475 | 1_1:-44126979 | Msa0023180:CDS |
| AAATGGTGACAATCTGTATC+TGG | 0.449846 | 1_1:+44126445 | None:intergenic |
| GAAAGTGATGATGTACTGTT+TGG | 0.456103 | 1_1:+44130807 | None:intergenic |
| TTCTTCAATGGACGATTGGC+AGG | 0.456294 | 1_1:-44126208 | Msa0023180:intron |
| ACCAGTTTGGAGGAACCATA+TGG | 0.456800 | 1_1:-44126312 | Msa0023180:CDS |
| GCTTAGCTGCGTGCCAATGC+GGG | 0.457813 | 1_1:-44124607 | Msa0023180:three_prime_UTR |
| TCATCTGGGTCACGCTCAAA+TGG | 0.458244 | 1_1:-44130489 | Msa0023180:CDS |
| AGTGAAAGGGATGGTGAAGT+TGG | 0.461843 | 1_1:-44130439 | Msa0023180:CDS |
| AAATGAACAGTTGTCGGATC+AGG | 0.464086 | 1_1:+44128928 | None:intergenic |
| TTATGGAAAGTGGGAAGAGA+GGG | 0.469075 | 1_1:-44130407 | Msa0023180:CDS |
| AAAATGCTGGAGCCATAGCC+AGG | 0.471308 | 1_1:-44127834 | Msa0023180:CDS |
| TGGAGTCTGCAAAGCGTTGA+CGG | 0.473220 | 1_1:+44127556 | None:intergenic |
| TGGGGTGTGATGGTAGATGA+TGG | 0.478215 | 1_1:+44130563 | None:intergenic |
| ACCATGCTAGCATTAATCAT+TGG | 0.478809 | 1_1:+44127536 | None:intergenic |
| TGGGATTAACTACCCTCTTG+GGG | 0.481634 | 1_1:-44126977 | Msa0023180:CDS |
| CCTAATGTCAAGCATTCAAC+TGG | 0.484755 | 1_1:+44128602 | None:intergenic |
| ATTTACACAGTTATAGAACT+AGG | 0.485783 | 1_1:-44124729 | Msa0023180:three_prime_UTR |
| CAACTTGATAACACAAGCAT+TGG | 0.487277 | 1_1:-44128980 | Msa0023180:CDS |
| ACTTTGGAGGTGGGGTGTGA+TGG | 0.488320 | 1_1:+44130553 | None:intergenic |
| TTTCAATGCTCTGAATTCGT+TGG | 0.490246 | 1_1:-44128678 | Msa0023180:CDS |
| AAAGATTGAAACTTTGGAGG+TGG | 0.490762 | 1_1:+44130543 | None:intergenic |
| AAGATTGAAACTTTGGAGGT+GGG | 0.491835 | 1_1:+44130544 | None:intergenic |
| CACGAGTATTATCACCGAGC+AGG | 0.494330 | 1_1:-44126878 | Msa0023180:CDS |
| CAACTTCTTCAATGGACGAT+TGG | 0.495431 | 1_1:-44126212 | Msa0023180:CDS |
| AGGAGAATCACTGCCAAAAG+AGG | 0.498346 | 1_1:-44126548 | Msa0023180:CDS |
| TTATTTGTCGTCGTTCCACT+AGG | 0.499517 | 1_1:-44130754 | Msa0023180:five_prime_UTR |
| ATGTGTATTGAAAGAAAAGA+TGG | 0.502132 | 1_1:+44126493 | None:intergenic |
| GGGACTCAGTTGGCTGTGAA+AGG | 0.502136 | 1_1:-44130324 | Msa0023180:CDS |
| AGTTACAGAAAGGAATATCT+TGG | 0.502589 | 1_1:+44124472 | None:intergenic |
| TCGCAATTTGATGCACAAGA+TGG | 0.505044 | 1_1:-44124629 | Msa0023180:three_prime_UTR |
| ATTGCAAAGTCCTTGGCAAA+AGG | 0.507882 | 1_1:-44126943 | Msa0023180:CDS |
| CTGAATATACTTCCTGGCTA+TGG | 0.509894 | 1_1:+44127822 | None:intergenic |
| CGAATATGAGGCAAAGAAGC+AGG | 0.510443 | 1_1:-44126001 | Msa0023180:CDS |
| GTTATGGAAAGTGGGAAGAG+AGG | 0.516588 | 1_1:-44130408 | Msa0023180:CDS |
| AGATTGAAACTTTGGAGGTG+GGG | 0.517468 | 1_1:+44130545 | None:intergenic |
| GTTGGTTGCTGGGACTCAGT+TGG | 0.518251 | 1_1:-44130334 | Msa0023180:CDS |
| AGATGAAAATGAACAGTTGT+CGG | 0.518578 | 1_1:+44128922 | None:intergenic |
| TTCTACCTCTATAAAATCGA+TGG | 0.521134 | 1_1:+44125918 | None:intergenic |
| ACTCGAACAGAGAGGTGGTT+TGG | 0.522462 | 1_1:+44128898 | None:intergenic |
| GAACAATTGGACCAGTTTGG+AGG | 0.525975 | 1_1:-44126322 | Msa0023180:CDS |
| GAAAGGGATGGTGAAGTTGG+AGG | 0.529091 | 1_1:-44130436 | Msa0023180:CDS |
| ATGCCACGCAGCATTCCAAA+GGG | 0.532817 | 1_1:-44125579 | Msa0023180:CDS |
| ATAGATGGTCTTTACTGTGT+TGG | 0.534434 | 1_1:-44125416 | Msa0023180:CDS |
| ACTTACGGCTTTGCCCTGCT+CGG | 0.535017 | 1_1:+44126864 | None:intergenic |
| GACAGTTGCTTCCCTGGACA+AGG | 0.535454 | 1_1:-44125392 | Msa0023180:CDS |
| AGGGTATTGATGAAAGTGAA+AGG | 0.535518 | 1_1:-44130453 | Msa0023180:CDS |
| CTCATAAAATTGATTCCTAG+TGG | 0.536568 | 1_1:+44130739 | None:intergenic |
| TGTGTGACAGACACTTTGGT+GGG | 0.539652 | 1_1:-44126996 | Msa0023180:CDS |
| AAGAAGTTGTGAATATATGA+AGG | 0.541078 | 1_1:+44126226 | None:intergenic |
| ACAGCAATAACACCTTGTCC+AGG | 0.542134 | 1_1:+44125380 | None:intergenic |
| GTCCATAAGTACCCTCGTCA+CGG | 0.543450 | 1_1:+44125604 | None:intergenic |
| GCTTGGTTGGTTAAGAACAT+TGG | 0.543596 | 1_1:-44124871 | Msa0023180:CDS |
| GGTAAAGATTGAAACTTTGG+AGG | 0.544715 | 1_1:+44130540 | None:intergenic |
| TTGGAGAAGTATGTTATACC+TGG | 0.544910 | 1_1:-44130285 | Msa0023180:CDS |
| AAAATGTAAAATAGAGAGGG+TGG | 0.545296 | 1_1:-44130923 | Msa0023180:five_prime_UTR |
| TCGATGGATGATCTAAGACC+TGG | 0.552826 | 1_1:+44125934 | None:intergenic |
| GGCTTAGCTGCGTGCCAATG+CGG | 0.553372 | 1_1:-44124608 | Msa0023180:three_prime_UTR |
| TCCAATGATTAATGCTAGCA+TGG | 0.556512 | 1_1:-44127537 | Msa0023180:intron |
| TAATATCAAATGCTACCAGA+TGG | 0.557408 | 1_1:-44126714 | Msa0023180:CDS |
| GGGTATTGATGAAAGTGAAA+GGG | 0.560886 | 1_1:-44130452 | Msa0023180:CDS |
| TCTCTCAAGAATCGAATATG+AGG | 0.561899 | 1_1:-44126013 | Msa0023180:CDS |
| ACACAAGCATTGGAAGCAGT+TGG | 0.564007 | 1_1:-44128970 | Msa0023180:CDS |
| GGAAGCAGTTGGTTGTCAGA+TGG | 0.564032 | 1_1:-44128959 | Msa0023180:CDS |
| TTTACACAGTTATAGAACTA+GGG | 0.564228 | 1_1:-44124728 | Msa0023180:three_prime_UTR |
| TAAAATGCATAGTTACAGAA+AGG | 0.565180 | 1_1:+44124462 | None:intergenic |
| ATAGAACTAGGGCGTTCGAT+CGG | 0.570562 | 1_1:-44124717 | Msa0023180:three_prime_UTR |
| TGGTGGGATTGCAAAGTCCT+TGG | 0.575419 | 1_1:-44126950 | Msa0023180:CDS |
| AACTATAAATAATGTTACAC+AGG | 0.578612 | 1_1:+44124803 | None:intergenic |
| TCCATAAGTACCCTCGTCAC+GGG | 0.581708 | 1_1:+44125605 | None:intergenic |
| TATGGAAAGTGGGAAGAGAG+GGG | 0.584235 | 1_1:-44130406 | Msa0023180:CDS |
| GCTCTTCCAAAGCTACATGA+AGG | 0.584743 | 1_1:+44130519 | None:intergenic |
| GTTCTGTGTGACAGACACTT+TGG | 0.585250 | 1_1:-44127000 | Msa0023180:CDS |
| TAGAAAATGTAAAATAGAGA+GGG | 0.586335 | 1_1:-44130926 | Msa0023180:five_prime_UTR |
| AATGATGAATCAAGTATAGT+CGG | 0.590388 | 1_1:+44126270 | None:intergenic |
| AATATCAAATGCTACCAGAT+GGG | 0.590986 | 1_1:-44126713 | Msa0023180:CDS |
| AATGCCACGCAGCATTCCAA+AGG | 0.592149 | 1_1:-44125580 | Msa0023180:CDS |
| GATTCATCATTAGCTCCTGA+AGG | 0.593456 | 1_1:-44126258 | Msa0023180:CDS |
| CTGTGTGACAGACACTTTGG+TGG | 0.593994 | 1_1:-44126997 | Msa0023180:CDS |
| CTAGAAAATGTAAAATAGAG+AGG | 0.594212 | 1_1:-44130927 | Msa0023180:five_prime_UTR |
| ACGAGTATTATCACCGAGCA+GGG | 0.595181 | 1_1:-44126877 | Msa0023180:CDS |
| TCTTGTGCATCAAATTGCGA+TGG | 0.607687 | 1_1:+44124632 | None:intergenic |
| GTAGGAGTGAGGCTTTCAGA+TGG | 0.611899 | 1_1:-44126760 | Msa0023180:CDS |
| GGTGTGATGGTAGATGATGG+GGG | 0.615243 | 1_1:+44130566 | None:intergenic |
| GTTGGAGCTAAAATCGCTTG+AGG | 0.617285 | 1_1:-44128660 | Msa0023180:CDS |
| GGGATTAACTACCCTCTTGG+GGG | 0.619406 | 1_1:-44126976 | Msa0023180:CDS |
| AGCAGTTGGTTGTCAGATGG+AGG | 0.621877 | 1_1:-44128956 | Msa0023180:CDS |
| GGGTAGTCAGATACTTTACA+AGG | 0.622656 | 1_1:-44126908 | Msa0023180:CDS |
| GCAAAAGGTCTAGTTGATCA+GGG | 0.623548 | 1_1:-44126928 | Msa0023180:CDS |
| GAGAAGTATGTTATACCTGG+TGG | 0.624831 | 1_1:-44130282 | Msa0023180:CDS |
| TCTATAACTGTGTAAATGCG+AGG | 0.632971 | 1_1:+44124735 | None:intergenic |
| CAGCAATAACACCTTGTCCA+GGG | 0.633374 | 1_1:+44125381 | None:intergenic |
| TTGTTGGGGAGGGAGGAGAG+CGG | 0.643982 | 1_1:-44124761 | Msa0023180:three_prime_UTR |
| TCTGGGTCACGCTCAAATGG+TGG | 0.644373 | 1_1:-44130486 | Msa0023180:CDS |
| TAAAACCCAGAACTTCCACC+AGG | 0.645610 | 1_1:+44130267 | None:intergenic |
| GCAGCTATAGAATCCCGCAT+TGG | 0.651693 | 1_1:+44124594 | None:intergenic |
| ACGATACTTAGCCCGTGACG+AGG | 0.654000 | 1_1:-44125616 | Msa0023180:CDS |
| GTTGTCTTTCATAGATGCCG+AGG | 0.659599 | 1_1:-44127788 | Msa0023180:intron |
| GAGTATAGGAGAATTGAGCA+TGG | 0.660806 | 1_1:+44130605 | None:intergenic |
| TGTGCACTCGAACAGAGAGG+TGG | 0.665428 | 1_1:+44128893 | None:intergenic |
| CGATACTTAGCCCGTGACGA+GGG | 0.667190 | 1_1:-44125615 | Msa0023180:CDS |
| AACCCCTTTGGAATGCTGCG+TGG | 0.680893 | 1_1:+44125576 | None:intergenic |
| TCTATGAAAGACAACAACTG+TGG | 0.688384 | 1_1:+44127796 | None:intergenic |
| CTCTGTGCACTCGAACAGAG+AGG | 0.688933 | 1_1:+44128890 | None:intergenic |
| ATATGAGGCAAAGAAGCAGG+TGG | 0.709650 | 1_1:-44125998 | Msa0023180:CDS |
| ATTGATGAAAGTGAAAGGGA+TGG | 0.714978 | 1_1:-44130448 | Msa0023180:CDS |
| TGGTGACAATCTGTATCTGG+TGG | 0.718339 | 1_1:+44126448 | None:intergenic |
| TGCCACGCAGCATTCCAAAG+GGG | 0.750458 | 1_1:-44125578 | Msa0023180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATTTTTATTTTTAA+TGG | + | chr1_1:44124567-44124586 | None:intergenic | 0.0% |
| !! | AAAAAAATTAATTACAAAAG+CGG | + | chr1_1:44126620-44126639 | None:intergenic | 10.0% |
| !!! | ATTATTTTAAAGTAAACTTA+CGG | + | chr1_1:44129822-44129841 | None:intergenic | 10.0% |
| !!! | ATTGTAATTTTATTTTTTGT+TGG | - | chr1_1:44130572-44130591 | Msa0023180:CDS | 10.0% |
| !!! | TTGTAATTTTATTTTTTGTT+GGG | - | chr1_1:44130573-44130592 | Msa0023180:CDS | 10.0% |
| !! | GTTTATATAAGAAATTCATA+GGG | - | chr1_1:44125606-44125625 | Msa0023180:CDS | 15.0% |
| !!! | AATTATTTTTGTATTTGTCT+AGG | - | chr1_1:44125971-44125990 | Msa0023180:CDS | 15.0% |
| !!! | AATGTATTTTATCTTTTTCA+TGG | - | chr1_1:44126145-44126164 | Msa0023180:intron | 15.0% |
| !! | TAATTATTGTTTATGTTGAA+TGG | - | chr1_1:44126286-44126305 | Msa0023180:CDS | 15.0% |
| !! | ACTTATAATTCAAATAATTG+AGG | - | chr1_1:44126933-44126952 | Msa0023180:CDS | 15.0% |
| !! | CTTATAATTCAAATAATTGA+GGG | - | chr1_1:44126934-44126953 | Msa0023180:CDS | 15.0% |
| !! | TTATAATTCAAATAATTGAG+GGG | - | chr1_1:44126935-44126954 | Msa0023180:CDS | 15.0% |
| !! | AAAAAGATGTAACATTATTA+CGG | - | chr1_1:44127292-44127311 | Msa0023180:intron | 15.0% |
| !!! | ATCAATATTTTCATATGATT+TGG | - | chr1_1:44127438-44127457 | Msa0023180:intron | 15.0% |
| !! | CATTTATTATGAAAATAATG+TGG | + | chr1_1:44127661-44127680 | None:intergenic | 15.0% |
| !! | AAAATTAATCAAATAAGAAG+CGG | + | chr1_1:44128321-44128340 | None:intergenic | 15.0% |
| !!! | AGATTTCAACTTTATTTTAT+TGG | + | chr1_1:44129190-44129209 | None:intergenic | 15.0% |
| !! | TAATATATTAAATGAGTGTT+TGG | + | chr1_1:44130293-44130312 | None:intergenic | 15.0% |
| !! | TTATTATTAAAAAATAGGGT+TGG | - | chr1_1:44130415-44130434 | Msa0023180:CDS | 15.0% |
| !!! | TGTAATTTTATTTTTTGTTG+GGG | - | chr1_1:44130574-44130593 | Msa0023180:CDS | 15.0% |
| !!! | GTTATTTTTTGGTAAGAAAA+TGG | + | chr1_1:44124718-44124737 | None:intergenic | 20.0% |
| !! | AAAATTTGCAACACATTTAT+AGG | - | chr1_1:44125519-44125538 | Msa0023180:intron | 20.0% |
| !! | AAATTTGCAACACATTTATA+GGG | - | chr1_1:44125520-44125539 | Msa0023180:intron | 20.0% |
| !! | AAAGAAATTGCTCAATTTAT+AGG | - | chr1_1:44125582-44125601 | Msa0023180:CDS | 20.0% |
| !! | AAGAAATTGCTCAATTTATA+GGG | - | chr1_1:44125583-44125602 | Msa0023180:CDS | 20.0% |
| !! | GGTTTATATAAGAAATTCAT+AGG | - | chr1_1:44125605-44125624 | Msa0023180:CDS | 20.0% |
| !!! | ACAAGAAATTGCAAAAATTT+TGG | - | chr1_1:44125635-44125654 | Msa0023180:CDS | 20.0% |
| !!! | CAAGAAATTGCAAAAATTTT+GGG | - | chr1_1:44125636-44125655 | Msa0023180:CDS | 20.0% |
| !!! | CTGTTTTCATTTTAAGTTAT+AGG | + | chr1_1:44125807-44125826 | None:intergenic | 20.0% |
| !! | TATTGTGCTTATATATTAGT+AGG | + | chr1_1:44125997-44126016 | None:intergenic | 20.0% |
| !! | TTTCTTAAATTACTTCTCAT+AGG | + | chr1_1:44126108-44126127 | None:intergenic | 20.0% |
| !! | TTAAAAGTCTATATTTGTCA+TGG | - | chr1_1:44126642-44126661 | Msa0023180:intron | 20.0% |
| !!! | ATTTGTTTGTTTTGAATATG+AGG | - | chr1_1:44126784-44126803 | Msa0023180:intron | 20.0% |
| !!! | ACTAATACTACCTTTAAAAT+TGG | + | chr1_1:44126833-44126852 | None:intergenic | 20.0% |
| !! | AAAAGATGTAACATTATTAC+GGG | - | chr1_1:44127293-44127312 | Msa0023180:intron | 20.0% |
| !! | AATGCAATTGAAAATTTGAA+AGG | - | chr1_1:44127337-44127356 | Msa0023180:intron | 20.0% |
| !! | ATGCAATTGAAAATTTGAAA+GGG | - | chr1_1:44127338-44127357 | Msa0023180:intron | 20.0% |
| !!! | ATTTTCATTCATAAAATCTC+TGG | - | chr1_1:44127746-44127765 | Msa0023180:intron | 20.0% |
| !!! | TCTTTTCATCATTTTAGAAT+CGG | + | chr1_1:44128161-44128180 | None:intergenic | 20.0% |
| !! | AAATTAATCAAATAAGAAGC+GGG | + | chr1_1:44128320-44128339 | None:intergenic | 20.0% |
| !! | AAAATACAGCAAAATTAATG+AGG | + | chr1_1:44129470-44129489 | None:intergenic | 20.0% |
| !!! | TCTTCTCTCTTTTTTTTTTT+TGG | + | chr1_1:44129569-44129588 | None:intergenic | 20.0% |
| !! | ACACATAAATAATCAAGATT+TGG | + | chr1_1:44129646-44129665 | None:intergenic | 20.0% |
| !! | TAAAATAATGATTCAATGAC+AGG | - | chr1_1:44129833-44129852 | Msa0023180:intron | 20.0% |
| !! | AACTATAAATAATGTTACAC+AGG | + | chr1_1:44130549-44130568 | None:intergenic | 20.0% |
| !!! | AAAAGAAAATTTTGTAAAGC+TGG | - | chr1_1:44130680-44130699 | Msa0023180:five_prime_UTR | 20.0% |
| !!! | AATTCCGAGTTTTAAAATAG+AGG | - | chr1_1:44124449-44124468 | Msa0023180:three_prime_UTR | 25.0% |
| !!! | ATTCCGAGTTTTAAAATAGA+GGG | - | chr1_1:44124450-44124469 | Msa0023180:three_prime_UTR | 25.0% |
| !!! | TTCAGTTTTAGTCAAAATAG+AGG | - | chr1_1:44124480-44124499 | Msa0023180:three_prime_UTR | 25.0% |
| !!! | TCAGTTTTAGTCAAAATAGA+GGG | - | chr1_1:44124481-44124500 | Msa0023180:three_prime_UTR | 25.0% |
| ! | TGGAAGACTTAAAAAAAACA+AGG | + | chr1_1:44124525-44124544 | None:intergenic | 25.0% |
| !! | GAATCAATTTTATGAGTAAG+TGG | - | chr1_1:44124617-44124636 | Msa0023180:three_prime_UTR | 25.0% |
| ! | TAATGCCATGAAAATGATAA+TGG | + | chr1_1:44124651-44124670 | None:intergenic | 25.0% |
| !!! | CATGGTTGTTAGTTATTTTT+TGG | + | chr1_1:44124729-44124748 | None:intergenic | 25.0% |
| !! | TCTAAGATAGCTTATGAAAA+CGG | - | chr1_1:44125283-44125302 | Msa0023180:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | - | chr1_1:44125406-44125425 | Msa0023180:CDS | 25.0% |
| ! | AATTTGCAACACATTTATAG+GGG | - | chr1_1:44125521-44125540 | Msa0023180:intron | 25.0% |
| ! | AGAAATTGCTCAATTTATAG+GGG | - | chr1_1:44125584-44125603 | Msa0023180:CDS | 25.0% |
| ! | GATTCTTTCAAAATCTATCA+CGG | + | chr1_1:44125785-44125804 | None:intergenic | 25.0% |
| ! | AATATTCTATGTTAGCATCA+AGG | - | chr1_1:44126013-44126032 | Msa0023180:CDS | 25.0% |
| !!! | AGGACTTTCCTTTTTAATTA+GGG | + | chr1_1:44126088-44126107 | None:intergenic | 25.0% |
| !!! | TAGGACTTTCCTTTTTAATT+AGG | + | chr1_1:44126089-44126108 | None:intergenic | 25.0% |
| ! | ATTTAAGAAACCAAGAACAA+AGG | - | chr1_1:44126118-44126137 | Msa0023180:intron | 25.0% |
| ! | CAGAAATCAATATTTACCTA+AGG | + | chr1_1:44126193-44126212 | None:intergenic | 25.0% |
| ! | ATGTACCTTAAATTTGTGTA+GGG | - | chr1_1:44126340-44126359 | Msa0023180:intron | 25.0% |
| ! | AAAATTAATTACAAAAGCGG+AGG | + | chr1_1:44126617-44126636 | None:intergenic | 25.0% |
| !!! | TACCTTTAAAATTGGAGTTT+GGG | + | chr1_1:44126825-44126844 | None:intergenic | 25.0% |
| !! | TTCTTTGCATTTTCATTGAT+AGG | - | chr1_1:44126875-44126894 | Msa0023180:CDS | 25.0% |
| !! | TCTTTGCATTTTCATTGATA+GGG | - | chr1_1:44126876-44126895 | Msa0023180:CDS | 25.0% |
| ! | TCAATTTGGTCCTATATTTA+GGG | + | chr1_1:44127141-44127160 | None:intergenic | 25.0% |
| ! | TGCAATTGAAAATTTGAAAG+GGG | - | chr1_1:44127339-44127358 | Msa0023180:intron | 25.0% |
| ! | TATAAAAAGGAGGTAGTATA+TGG | - | chr1_1:44127365-44127384 | Msa0023180:intron | 25.0% |
| ! | TATTGATACAATGCTCAATT+AGG | + | chr1_1:44127425-44127444 | None:intergenic | 25.0% |
| !! | TGATGATGTACGTTATTATA+TGG | - | chr1_1:44127474-44127493 | Msa0023180:intron | 25.0% |
| ! | TGACTCTTTCTATGAAAAAT+AGG | + | chr1_1:44127625-44127644 | None:intergenic | 25.0% |
| ! | GAATGATTAATGAATGAGTA+GGG | + | chr1_1:44127703-44127722 | None:intergenic | 25.0% |
| ! | TGAATGATTAATGAATGAGT+AGG | + | chr1_1:44127704-44127723 | None:intergenic | 25.0% |
| ! | GAATGAAAATTACTAATCAC+AGG | + | chr1_1:44127736-44127755 | None:intergenic | 25.0% |
| !! | ATTTGATTAATTTTGTGTCC+AGG | - | chr1_1:44128327-44128346 | Msa0023180:intron | 25.0% |
| ! | ATTGTAGGAAAGTTAGTAAA+AGG | - | chr1_1:44128781-44128800 | Msa0023180:intron | 25.0% |
| ! | ATGTGTATTGAAAGAAAAGA+TGG | + | chr1_1:44128859-44128878 | None:intergenic | 25.0% |
| !! | ATCTTTTCTTTCAATACACA+TGG | - | chr1_1:44128858-44128877 | Msa0023180:CDS | 25.0% |
| !! | TCTTTTCTTTCAATACACAT+GGG | - | chr1_1:44128859-44128878 | Msa0023180:CDS | 25.0% |
| ! | GCTATATAGATTTATAGTTG+AGG | + | chr1_1:44128954-44128973 | None:intergenic | 25.0% |
| ! | TCATTCATTCAAAGTTATCA+AGG | + | chr1_1:44128976-44128995 | None:intergenic | 25.0% |
| !! | GATAACTTTTTGTATTTCAC+TGG | - | chr1_1:44128994-44129013 | Msa0023180:intron | 25.0% |
| ! | AATGATGAATCAAGTATAGT+CGG | + | chr1_1:44129082-44129101 | None:intergenic | 25.0% |
| ! | AAGAAGTTGTGAATATATGA+AGG | + | chr1_1:44129126-44129145 | None:intergenic | 25.0% |
| ! | TATATTCACAACTTCTTCAA+TGG | - | chr1_1:44129129-44129148 | Msa0023180:intron | 25.0% |
| !!! | AAAGGTAATTTTTGAAGTCA+TGG | + | chr1_1:44129231-44129250 | None:intergenic | 25.0% |
| ! | AGGCAAATGAATAAAAAAGA+AGG | + | chr1_1:44129265-44129284 | None:intergenic | 25.0% |
| !!! | ATTTTGAGATTTACATGTAC+AGG | + | chr1_1:44129285-44129304 | None:intergenic | 25.0% |
| !! | AAAAAGCTTTTAACAACGTA+TGG | + | chr1_1:44129500-44129519 | None:intergenic | 25.0% |
| ! | AAGACAAATTATGTCTTCTA+GGG | + | chr1_1:44129544-44129563 | None:intergenic | 25.0% |
| ! | TGACATATTTATATCGTGTT+TGG | - | chr1_1:44130168-44130187 | Msa0023180:intron | 25.0% |
| !! | ACTCATTTGAATGTAGTTTT+AGG | + | chr1_1:44130200-44130219 | None:intergenic | 25.0% |
| ! | CATTGAAATAAACAAAAGCA+CGG | + | chr1_1:44130265-44130284 | None:intergenic | 25.0% |
| !!! | TGCTTTTGTTTATTTCAATG+TGG | - | chr1_1:44130265-44130284 | Msa0023180:CDS | 25.0% |
| !!! | AATTTTATTTTTTGTTGGGG+AGG | - | chr1_1:44130577-44130596 | Msa0023180:CDS | 25.0% |
| !!! | ATTTTATTTTTTGTTGGGGA+GGG | - | chr1_1:44130578-44130597 | Msa0023180:CDS | 25.0% |
| ! | ATTTACACAGTTATAGAACT+AGG | - | chr1_1:44130620-44130639 | Msa0023180:exon | 25.0% |
| ! | TTTACACAGTTATAGAACTA+GGG | - | chr1_1:44130621-44130640 | Msa0023180:exon | 25.0% |
| ! | TTGTTTGGATAAAAGAAAAC+TGG | + | chr1_1:44130842-44130861 | None:intergenic | 25.0% |
| ! | TACAAGTATAACTCTTTGTT+TGG | + | chr1_1:44130857-44130876 | None:intergenic | 25.0% |
| ! | TAAAATGCATAGTTACAGAA+AGG | + | chr1_1:44130890-44130909 | None:intergenic | 25.0% |
| AAAATGTAAAATAGAGAGGG+TGG | - | chr1_1:44124426-44124445 | Msa0023180:three_prime_UTR | 30.0% | |
| !!! | TTCCGAGTTTTAAAATAGAG+GGG | - | chr1_1:44124451-44124470 | Msa0023180:three_prime_UTR | 30.0% |
| !! | CAGTTTTAGTCAAAATAGAG+GGG | - | chr1_1:44124482-44124501 | Msa0023180:three_prime_UTR | 30.0% |
| !! | AGTTTTAGTCAAAATAGAGG+GGG | - | chr1_1:44124483-44124502 | Msa0023180:three_prime_UTR | 30.0% |
| ! | CTCATAAAATTGATTCCTAG+TGG | + | chr1_1:44124613-44124632 | None:intergenic | 30.0% |
| ! | CTTCACCATTATCATTTTCA+TGG | - | chr1_1:44124643-44124662 | Msa0023180:three_prime_UTR | 30.0% |
| ! | TTTTGGTAAGAAAATGGAAG+TGG | + | chr1_1:44124712-44124731 | None:intergenic | 30.0% |
| GAAGGTAAAGATTGAAACTT+TGG | + | chr1_1:44124815-44124834 | None:intergenic | 30.0% | |
| AAATGGTGGTAGAAGAAAAA+GGG | - | chr1_1:44124877-44124896 | Msa0023180:CDS | 30.0% | |
| AGGAAAAAGTTATGGAAAGT+GGG | - | chr1_1:44124933-44124952 | Msa0023180:intron | 30.0% | |
| ! | GGTTTGATGCAATTGTTATT+GGG | - | chr1_1:44124978-44124997 | Msa0023180:intron | 30.0% |
| !!! | AAGTTCTGGGTTTTATCATA+GGG | - | chr1_1:44125090-44125109 | Msa0023180:intron | 30.0% |
| ! | TATGTTTGGTTTCAGTGATA+AGG | - | chr1_1:44125144-44125163 | Msa0023180:intron | 30.0% |
| AGAGTTCAATGTTATAGTGA+AGG | - | chr1_1:44125221-44125240 | Msa0023180:intron | 30.0% | |
| ! | TTTATCCAAACATGGCTTTA+AGG | - | chr1_1:44125414-44125433 | Msa0023180:CDS | 30.0% |
| !! | GCTTTAAGGTTTGTTTAGAT+TGG | - | chr1_1:44125428-44125447 | Msa0023180:intron | 30.0% |
| !!! | TGTTGCAAATTTTTTTTGCC+CGG | + | chr1_1:44125512-44125531 | None:intergenic | 30.0% |
| GGTTTACATAAGAAATTGCA+AGG | - | chr1_1:44125542-44125561 | Msa0023180:intron | 30.0% | |
| ! | AAATTGCAAAAATTTTGGGC+CGG | - | chr1_1:44125640-44125659 | Msa0023180:CDS | 30.0% |
| TAAACACTTGTGATCTTGTT+AGG | - | chr1_1:44125693-44125712 | Msa0023180:intron | 30.0% | |
| AAACACTTGTGATCTTGTTA+GGG | - | chr1_1:44125694-44125713 | Msa0023180:intron | 30.0% | |
| ATAAGCTAGAAAACAACTGA+TGG | + | chr1_1:44125749-44125768 | None:intergenic | 30.0% | |
| CTACTTCTCCCTAATTAAAA+AGG | - | chr1_1:44126077-44126096 | Msa0023180:intron | 30.0% | |
| TACATTTACACCTTTGTTCT+TGG | + | chr1_1:44126131-44126150 | None:intergenic | 30.0% | |
| ! | CTACACAAATTTAAGGTACA+TGG | + | chr1_1:44126341-44126360 | None:intergenic | 30.0% |
| CATGTACCTTAAATTTGTGT+AGG | - | chr1_1:44126339-44126358 | Msa0023180:intron | 30.0% | |
| GATTACCCTACACAAATTTA+AGG | + | chr1_1:44126348-44126367 | None:intergenic | 30.0% | |
| AGATGAAAATGAACAGTTGT+CGG | + | chr1_1:44126430-44126449 | None:intergenic | 30.0% | |
| !! | AAGTTATTTTCCCCATGAAA+AGG | - | chr1_1:44126510-44126529 | Msa0023180:CDS | 30.0% |
| AGCATTCACCATAAAATTTG+AGG | + | chr1_1:44126543-44126562 | None:intergenic | 30.0% | |
| ! | TCAAATTTTATGGTGAATGC+TGG | - | chr1_1:44126542-44126561 | Msa0023180:CDS | 30.0% |
| TCTGAAAAAACTGTCCAAAA+AGG | + | chr1_1:44126725-44126744 | None:intergenic | 30.0% | |
| !! | CTACCTTTAAAATTGGAGTT+TGG | + | chr1_1:44126826-44126845 | None:intergenic | 30.0% |
| ! | ATTTTCATTGATAGGGACTA+GGG | - | chr1_1:44126883-44126902 | Msa0023180:CDS | 30.0% |
| TTGAGGGGAAACTAAATAAA+CGG | - | chr1_1:44126950-44126969 | Msa0023180:CDS | 30.0% | |
| GTCAATTTGGTCCTATATTT+AGG | + | chr1_1:44127142-44127161 | None:intergenic | 30.0% | |
| AAATATAGGACCAAATTGAC+CGG | - | chr1_1:44127142-44127161 | Msa0023180:intron | 30.0% | |
| ! | TTGAAAGGGGTCTTATAAAA+AGG | - | chr1_1:44127352-44127371 | Msa0023180:intron | 30.0% |
| TACATCATCAGAAAAGCAAA+TGG | + | chr1_1:44127464-44127483 | None:intergenic | 30.0% | |
| !!! | AGCATTTTGAGGCAAATAAT+AGG | + | chr1_1:44127503-44127522 | None:intergenic | 30.0% |
| TATTATTTGCCTCAAAATGC+TGG | - | chr1_1:44127502-44127521 | Msa0023180:intron | 30.0% | |
| ATGAAAGAAAGCAAAAAGCT+AGG | + | chr1_1:44127849-44127868 | None:intergenic | 30.0% | |
| AGTACAATAAGAACATTGCA+TGG | + | chr1_1:44127873-44127892 | None:intergenic | 30.0% | |
| TGCAACTAAAAGCAATGAAA+GGG | + | chr1_1:44127926-44127945 | None:intergenic | 30.0% | |
| ATGCAACTAAAAGCAATGAA+AGG | + | chr1_1:44127927-44127946 | None:intergenic | 30.0% | |
| !! | TTCATTGCTTTTAGTTGCAT+TGG | - | chr1_1:44127927-44127946 | Msa0023180:intron | 30.0% |
| ! | GACAAAAAAGCATACAATGT+TGG | + | chr1_1:44128014-44128033 | None:intergenic | 30.0% |
| !!! | CATTGTATGCTTTTTTGTCT+TGG | - | chr1_1:44128015-44128034 | Msa0023180:intron | 30.0% |
| ! | TGTCTTGGTAACTATACAAA+TGG | - | chr1_1:44128030-44128049 | Msa0023180:intron | 30.0% |
| ! | GTAATCTGATATGTCACTTA+CGG | + | chr1_1:44128503-44128522 | None:intergenic | 30.0% |
| ! | GATTTGTACTATACTTTTGC+AGG | - | chr1_1:44128567-44128586 | Msa0023180:intron | 30.0% |
| ! | AGCATTTGATATTACGGTTT+TGG | + | chr1_1:44128629-44128648 | None:intergenic | 30.0% |
| TCTGGTAGCATTTGATATTA+CGG | + | chr1_1:44128635-44128654 | None:intergenic | 30.0% | |
| TAATATCAAATGCTACCAGA+TGG | - | chr1_1:44128635-44128654 | Msa0023180:CDS | 30.0% | |
| AATATCAAATGCTACCAGAT+GGG | - | chr1_1:44128636-44128655 | Msa0023180:CDS | 30.0% | |
| AATGAAGGTAGACAAAAAAC+AGG | + | chr1_1:44128730-44128749 | None:intergenic | 30.0% | |
| CGGGATTAACTAATTAATGA+AGG | + | chr1_1:44128745-44128764 | None:intergenic | 30.0% | |
| AATGTAACATTATGCAGTTC+GGG | + | chr1_1:44128764-44128783 | None:intergenic | 30.0% | |
| CAATGTAACATTATGCAGTT+CGG | + | chr1_1:44128765-44128784 | None:intergenic | 30.0% | |
| ACTGCATAATGTTACATTGT+AGG | - | chr1_1:44128766-44128785 | Msa0023180:intron | 30.0% | |
| ! | CTTTTCTTTCAATACACATG+GGG | - | chr1_1:44128860-44128879 | Msa0023180:CDS | 30.0% |
| ! | TTTTCTTTCAATACACATGG+GGG | - | chr1_1:44128861-44128880 | Msa0023180:CDS | 30.0% |
| ! | TGGTACTTATCTAGAACAAT+TGG | - | chr1_1:44129014-44129033 | Msa0023180:intron | 30.0% |
| CTCAAAAAGATACTTCCATA+TGG | + | chr1_1:44129055-44129074 | None:intergenic | 30.0% | |
| !!! | ATGTTCTTGTTTTCTGTTCT+AGG | - | chr1_1:44129312-44129331 | Msa0023180:intron | 30.0% |
| !!! | TGTTCTTGTTTTCTGTTCTA+GGG | - | chr1_1:44129313-44129332 | Msa0023180:intron | 30.0% |
| TTAGAGAAGAAATTGTTTCC+AGG | - | chr1_1:44129397-44129416 | Msa0023180:intron | 30.0% | |
| !!! | ATCATCCATCGATTTTATAG+AGG | - | chr1_1:44129426-44129445 | Msa0023180:intron | 30.0% |
| TTCTACCTCTATAAAATCGA+TGG | + | chr1_1:44129434-44129453 | None:intergenic | 30.0% | |
| CAAGACAAATTATGTCTTCT+AGG | + | chr1_1:44129545-44129564 | None:intergenic | 30.0% | |
| AAACTTACGGTTGTGTTAAA+CGG | + | chr1_1:44129809-44129828 | None:intergenic | 30.0% | |
| ATTCAAATGAGTTTCAACGT+GGG | - | chr1_1:44130208-44130227 | Msa0023180:CDS | 30.0% | |
| AGTTACAGAAAGGAATATCT+TGG | + | chr1_1:44130880-44130899 | None:intergenic | 30.0% | |
| !!! | TCCGAGTTTTAAAATAGAGG+GGG | - | chr1_1:44124452-44124471 | Msa0023180:three_prime_UTR | 35.0% |
| !!! | ACCCCCTCTATTTTAAAACT+CGG | + | chr1_1:44124456-44124475 | None:intergenic | 35.0% |
| ! | GAAAGTGATGATGTACTGTT+TGG | + | chr1_1:44124545-44124564 | None:intergenic | 35.0% |
| ! | TGGTTAGAAACAGAGAGTAT+AGG | + | chr1_1:44124761-44124780 | None:intergenic | 35.0% |
| ! | AAGATTGAAACTTTGGAGGT+GGG | + | chr1_1:44124808-44124827 | None:intergenic | 35.0% |
| ! | AAAGATTGAAACTTTGGAGG+TGG | + | chr1_1:44124809-44124828 | None:intergenic | 35.0% |
| GGTAAAGATTGAAACTTTGG+AGG | + | chr1_1:44124812-44124831 | None:intergenic | 35.0% | |
| TCTTTACCTTCATGTAGCTT+TGG | - | chr1_1:44124824-44124843 | Msa0023180:three_prime_UTR | 35.0% | |
| ! | GAAGAGCTGAATTTTCATCT+GGG | - | chr1_1:44124846-44124865 | Msa0023180:three_prime_UTR | 35.0% |
| CAAATGGTGGTAGAAGAAAA+AGG | - | chr1_1:44124876-44124895 | Msa0023180:CDS | 35.0% | |
| !! | AGGGTATTGATGAAAGTGAA+AGG | - | chr1_1:44124896-44124915 | Msa0023180:CDS | 35.0% |
| !! | GGGTATTGATGAAAGTGAAA+GGG | - | chr1_1:44124897-44124916 | Msa0023180:CDS | 35.0% |
| ATTGATGAAAGTGAAAGGGA+TGG | - | chr1_1:44124901-44124920 | Msa0023180:CDS | 35.0% | |
| GAAGTTGGAGGAAAAAGTTA+TGG | - | chr1_1:44124925-44124944 | Msa0023180:intron | 35.0% | |
| GAGGAAAAAGTTATGGAAAG+TGG | - | chr1_1:44124932-44124951 | Msa0023180:intron | 35.0% | |
| GGGTTTGATGCAATTGTTAT+TGG | - | chr1_1:44124977-44124996 | Msa0023180:intron | 35.0% | |
| ! | ATGCAATTGTTATTGGGTCT+GGG | - | chr1_1:44124984-44125003 | Msa0023180:intron | 35.0% |
| !! | TGTGAAAGGTGCAAAAGTTT+TGG | - | chr1_1:44125039-44125058 | Msa0023180:intron | 35.0% |
| !!! | AGGTGCAAAAGTTTTGGTTT+TGG | - | chr1_1:44125045-44125064 | Msa0023180:intron | 35.0% |
| ! | TTGGAGAAGTATGTTATACC+TGG | - | chr1_1:44125064-44125083 | Msa0023180:intron | 35.0% |
| !!! | GAAGTTCTGGGTTTTATCAT+AGG | - | chr1_1:44125089-44125108 | Msa0023180:intron | 35.0% |
| ! | TTTGGTTTCAGTGATAAGGT+TGG | - | chr1_1:44125148-44125167 | Msa0023180:intron | 35.0% |
| ACAAACCTTAAAGCCATGTT+TGG | + | chr1_1:44125422-44125441 | None:intergenic | 35.0% | |
| TACCTAATAGCATAAACCAG+TGG | - | chr1_1:44125463-44125482 | Msa0023180:intron | 35.0% | |
| !!! | GTTGCAAATTTTTTTTGCCC+GGG | + | chr1_1:44125511-44125530 | None:intergenic | 35.0% |
| AATCTATCACGGAGAACTTA+TGG | + | chr1_1:44125774-44125793 | None:intergenic | 35.0% | |
| ! | AGGGACTAATTGTTTCTTTC+TGG | - | chr1_1:44125914-44125933 | Msa0023180:intron | 35.0% |
| !! | GCTATGCTTTAGAAATGGAA+TGG | - | chr1_1:44125939-44125958 | Msa0023180:CDS | 35.0% |
| !! | GCTTTAGAAATGGAATGGAA+TGG | - | chr1_1:44125944-44125963 | Msa0023180:CDS | 35.0% |
| ! | AGGCCATTGTTATTAGTTAG+TGG | - | chr1_1:44126033-44126052 | Msa0023180:intron | 35.0% |
| ! | GTGCCACTAACTAATAACAA+TGG | + | chr1_1:44126039-44126058 | None:intergenic | 35.0% |
| TATTTACCTAAGGCAACTCA+TGG | + | chr1_1:44126183-44126202 | None:intergenic | 35.0% | |
| ! | CCTCAAGCTATTATTGACTA+AGG | + | chr1_1:44126256-44126275 | None:intergenic | 35.0% |
| CCTTAGTCAATAATAGCTTG+AGG | - | chr1_1:44126253-44126272 | Msa0023180:CDS | 35.0% | |
| ! | CAACTTGATAACACAAGCAT+TGG | - | chr1_1:44126369-44126388 | Msa0023180:intron | 35.0% |
| ! | TATTTTCCCCATGAAAAGGA+CGG | - | chr1_1:44126514-44126533 | Msa0023180:CDS | 35.0% |
| ! | ATTTTATGGTGAATGCTGGA+AGG | - | chr1_1:44126546-44126565 | Msa0023180:CDS | 35.0% |
| TGGAAGGTTTGTCTTAATTG+AGG | - | chr1_1:44126562-44126581 | Msa0023180:CDS | 35.0% | |
| ! | TTTCAATGCTCTGAATTCGT+TGG | - | chr1_1:44126671-44126690 | Msa0023180:intron | 35.0% |
| ! | CTCCCAAACTCCAATTTTAA+AGG | - | chr1_1:44126820-44126839 | Msa0023180:intron | 35.0% |
| ! | TATTAGTTTCTATTGCCACC+TGG | - | chr1_1:44126846-44126865 | Msa0023180:intron | 35.0% |
| AAATGCAAAGAAGATATGCC+AGG | + | chr1_1:44126867-44126886 | None:intergenic | 35.0% | |
| ! | CATTTTCATTGATAGGGACT+AGG | - | chr1_1:44126882-44126901 | Msa0023180:CDS | 35.0% |
| AAGTGAAGCAGTATTACTCT+TGG | - | chr1_1:44127019-44127038 | Msa0023180:intron | 35.0% | |
| GTTGTCTACCATATGAATTC+GGG | + | chr1_1:44127058-44127077 | None:intergenic | 35.0% | |
| GGTTGTCTACCATATGAATT+CGG | + | chr1_1:44127059-44127078 | None:intergenic | 35.0% | |
| AACTCATTCTCTCTCTTGAA+GGG | + | chr1_1:44127237-44127256 | None:intergenic | 35.0% | |
| AAACTCATTCTCTCTCTTGA+AGG | + | chr1_1:44127238-44127257 | None:intergenic | 35.0% | |
| TAACATTATTACGGGTTTGC+TGG | - | chr1_1:44127301-44127320 | Msa0023180:intron | 35.0% | |
| ! | AAAGGGGTCTTATAAAAAGG+AGG | - | chr1_1:44127355-44127374 | Msa0023180:intron | 35.0% |
| TCTATGAAAGACAACAACTG+TGG | + | chr1_1:44127556-44127575 | None:intergenic | 35.0% | |
| ATAACTAGTTGCATCTACCT+CGG | + | chr1_1:44127581-44127600 | None:intergenic | 35.0% | |
| AGTTATTCGATTCTGTCAGA+AGG | - | chr1_1:44127595-44127614 | Msa0023180:intron | 35.0% | |
| TCCAATGATTAATGCTAGCA+TGG | - | chr1_1:44127812-44127831 | Msa0023180:CDS | 35.0% | |
| ACCATGCTAGCATTAATCAT+TGG | + | chr1_1:44127816-44127835 | None:intergenic | 35.0% | |
| AAAGCATACAATGTTGGACT+TGG | + | chr1_1:44128008-44128027 | None:intergenic | 35.0% | |
| CGTACACAACAATGAAAGAA+TGG | + | chr1_1:44128101-44128120 | None:intergenic | 35.0% | |
| ! | CATTGTTGTGTACGATGTTT+TGG | - | chr1_1:44128107-44128126 | Msa0023180:intron | 35.0% |
| ! | TGTACTATACTTTTGCAGGT+AGG | - | chr1_1:44128571-44128590 | Msa0023180:intron | 35.0% |
| ! | TGAAAGTTCTCTTCCTCTTT+TGG | + | chr1_1:44128817-44128836 | None:intergenic | 35.0% |
| AAATGGTGACAATCTGTATC+TGG | + | chr1_1:44128907-44128926 | None:intergenic | 35.0% | |
| !! | TTTTATTGGTAACCACTGCT+CGG | + | chr1_1:44129176-44129195 | None:intergenic | 35.0% |
| ! | AAGAAGGCACAGCATAAAAA+AGG | + | chr1_1:44129249-44129268 | None:intergenic | 35.0% |
| TCTCTCAAGAATCGAATATG+AGG | - | chr1_1:44129336-44129355 | Msa0023180:intron | 35.0% | |
| AGCAAAATTAATGAGGTCAG+AGG | + | chr1_1:44129463-44129482 | None:intergenic | 35.0% | |
| ATAGATGGTCTTTACTGTGT+TGG | - | chr1_1:44129933-44129952 | Msa0023180:intron | 35.0% | |
| TTGCAAACAGTTTACAGCTA+TGG | + | chr1_1:44130063-44130082 | None:intergenic | 35.0% | |
| CATTCAAATGAGTTTCAACG+TGG | - | chr1_1:44130207-44130226 | Msa0023180:CDS | 35.0% | |
| !! | AAAAAGTCACCTGTTTTGGA+CGG | - | chr1_1:44130440-44130459 | Msa0023180:CDS | 35.0% |
| TCTATAACTGTGTAAATGCG+AGG | + | chr1_1:44130617-44130636 | None:intergenic | 35.0% | |
| TTATTTGTCGTCGTTCCACT+AGG | - | chr1_1:44124595-44124614 | Msa0023180:three_prime_UTR | 40.0% | |
| GAGTATAGGAGAATTGAGCA+TGG | + | chr1_1:44124747-44124766 | None:intergenic | 40.0% | |
| ! | AGATTGAAACTTTGGAGGTG+GGG | + | chr1_1:44124807-44124826 | None:intergenic | 40.0% |
| ! | GGAAGAGCTGAATTTTCATC+TGG | - | chr1_1:44124845-44124864 | Msa0023180:three_prime_UTR | 40.0% |
| TTATGGAAAGTGGGAAGAGA+GGG | - | chr1_1:44124942-44124961 | Msa0023180:intron | 40.0% | |
| !! | AAGAGAGGGGATTTTAGTGA+AGG | - | chr1_1:44124956-44124975 | Msa0023180:intron | 40.0% |
| !! | AGAGAGGGGATTTTAGTGAA+GGG | - | chr1_1:44124957-44124976 | Msa0023180:intron | 40.0% |
| ! | GATGCAATTGTTATTGGGTC+TGG | - | chr1_1:44124983-44125002 | Msa0023180:intron | 40.0% |
| ! | ATTGTTATTGGGTCTGGGAT+TGG | - | chr1_1:44124989-44125008 | Msa0023180:intron | 40.0% |
| ! | GAGAAGTATGTTATACCTGG+TGG | - | chr1_1:44125067-44125086 | Msa0023180:intron | 40.0% |
| TTATACCTGGTGGAAGTTCT+GGG | - | chr1_1:44125077-44125096 | Msa0023180:intron | 40.0% | |
| !! | TTCTGGGTTTTATCATAGGG+AGG | - | chr1_1:44125093-44125112 | Msa0023180:intron | 40.0% |
| !! | TCTGGGTTTTATCATAGGGA+GGG | - | chr1_1:44125094-44125113 | Msa0023180:intron | 40.0% |
| !! | GAGGGGTATACTTTTGATGT+TGG | - | chr1_1:44125112-44125131 | Msa0023180:intron | 40.0% |
| ! | GTTGGCTCTTCTGTTATGTT+TGG | - | chr1_1:44125130-44125149 | Msa0023180:intron | 40.0% |
| CTAATAGCATAAACCAGTGG+CGG | - | chr1_1:44125466-44125485 | Msa0023180:intron | 40.0% | |
| AGAAACAATTAGTCCCTGCT+GGG | + | chr1_1:44125911-44125930 | None:intergenic | 40.0% | |
| AAGAAACAATTAGTCCCTGC+TGG | + | chr1_1:44125912-44125931 | None:intergenic | 40.0% | |
| !! | TGGCTGCTATGCTTTAGAAA+TGG | - | chr1_1:44125934-44125953 | Msa0023180:CDS | 40.0% |
| AAATGAACAGTTGTCGGATC+AGG | + | chr1_1:44126424-44126443 | None:intergenic | 40.0% | |
| ! | GACGGCATCCTCAAATTTTA+TGG | - | chr1_1:44126532-44126551 | Msa0023180:CDS | 40.0% |
| AACTGTCCAAAAAGGTAGAG+TGG | + | chr1_1:44126717-44126736 | None:intergenic | 40.0% | |
| CCTAATGTCAAGCATTCAAC+TGG | + | chr1_1:44126750-44126769 | None:intergenic | 40.0% | |
| CCAGTTGAATGCTTGACATT+AGG | - | chr1_1:44126747-44126766 | Msa0023180:CDS | 40.0% | |
| TTTGTGTGCCCGAATTCATA+TGG | - | chr1_1:44127047-44127066 | Msa0023180:intron | 40.0% | |
| !! | ACAACCTGTGTCGACTTATA+TGG | - | chr1_1:44127073-44127092 | Msa0023180:intron | 40.0% |
| TCATCCATATAAGTCGACAC+AGG | + | chr1_1:44127080-44127099 | None:intergenic | 40.0% | |
| CCTATATTTAGGGATAGAGG+TGG | + | chr1_1:44127131-44127150 | None:intergenic | 40.0% | |
| CCACCTCTATCCCTAAATAT+AGG | - | chr1_1:44127128-44127147 | Msa0023180:intron | 40.0% | |
| GGTCCTATATTTAGGGATAG+AGG | + | chr1_1:44127134-44127153 | None:intergenic | 40.0% | |
| GGAATTCAGAATGTTGCTAC+TGG | - | chr1_1:44127171-44127190 | Msa0023180:intron | 40.0% | |
| CTGAATATACTTCCTGGCTA+TGG | + | chr1_1:44127530-44127549 | None:intergenic | 40.0% | |
| ! | CATAGCCAGGAAGTATATTC+AGG | - | chr1_1:44127528-44127547 | Msa0023180:intron | 40.0% |
| TGGATCCTGAATATACTTCC+TGG | + | chr1_1:44127536-44127555 | None:intergenic | 40.0% | |
| ! | TCACTGTCATTCTAGCTATC+TGG | + | chr1_1:44127973-44127992 | None:intergenic | 40.0% |
| !! | AGAAGCACCTTTGGAAATGT+AGG | - | chr1_1:44128187-44128206 | Msa0023180:intron | 40.0% |
| ! | GAAGCACCTTTGGAAATGTA+GGG | - | chr1_1:44128188-44128207 | Msa0023180:intron | 40.0% |
| TGTCATCCCTACATTTCCAA+AGG | + | chr1_1:44128197-44128216 | None:intergenic | 40.0% | |
| GGGTAGTCAGATACTTTACA+AGG | - | chr1_1:44128441-44128460 | Msa0023180:intron | 40.0% | |
| ! | TTGTCACCATTTTGTGCTTG+AGG | - | chr1_1:44128915-44128934 | Msa0023180:CDS | 40.0% |
| CAACTACCTCAAGCACAAAA+TGG | + | chr1_1:44128924-44128943 | None:intergenic | 40.0% | |
| ! | CATTTTGTGCTTGAGGTAGT+TGG | - | chr1_1:44128922-44128941 | Msa0023180:CDS | 40.0% |
| CTAGAACAATTGGACCAGTT+TGG | - | chr1_1:44129024-44129043 | Msa0023180:intron | 40.0% | |
| GATTCATCATTAGCTCCTGA+AGG | - | chr1_1:44129091-44129110 | Msa0023180:intron | 40.0% | |
| CAACTTCTTCAATGGACGAT+TGG | - | chr1_1:44129137-44129156 | Msa0023180:intron | 40.0% | |
| ! | AAGTCATGGAAGCACACAAA+AGG | + | chr1_1:44129217-44129236 | None:intergenic | 40.0% |
| AGTTAGAGTTGGGGGTTAAA+AGG | + | chr1_1:44129686-44129705 | None:intergenic | 40.0% | |
| ! | AAGTATCGTCGATGTGTCTT+AGG | + | chr1_1:44129722-44129741 | None:intergenic | 40.0% |
| ACTTGCTTTCAGAGCATAGA+TGG | - | chr1_1:44129918-44129937 | Msa0023180:intron | 40.0% | |
| GTTATTGCTGTAGCTTTCTC+AGG | - | chr1_1:44129981-44130000 | Msa0023180:intron | 40.0% | |
| ! | CAAAAGCACGGCAATAATGA+AGG | + | chr1_1:44130253-44130272 | None:intergenic | 40.0% |
| ! | GGAGAAAAAGTCACCTGTTT+TGG | - | chr1_1:44130436-44130455 | Msa0023180:CDS | 40.0% |
| ! | GCTTGGTTGGTTAAGAACAT+TGG | - | chr1_1:44130478-44130497 | Msa0023180:CDS | 40.0% |
| !!! | TTATTTTTTGTTGGGGAGGG+AGG | - | chr1_1:44130581-44130600 | Msa0023180:CDS | 40.0% |
| TCTTGTGCATCAAATTGCGA+TGG | + | chr1_1:44130720-44130739 | None:intergenic | 40.0% | |
| TCGCAATTTGATGCACAAGA+TGG | - | chr1_1:44130720-44130739 | Msa0023180:five_prime_UTR | 40.0% | |
| ! | AGCTGCATAGAATCCGATTT+TGG | - | chr1_1:44130772-44130791 | Msa0023180:five_prime_UTR | 40.0% |
| ! | GCTGCATAGAATCCGATTTT+GGG | - | chr1_1:44130773-44130792 | Msa0023180:five_prime_UTR | 40.0% |
| !! | ATAGAATCCGATTTTGGGAG+TGG | - | chr1_1:44130778-44130797 | Msa0023180:five_prime_UTR | 40.0% |
| !! | TAGAATCCGATTTTGGGAGT+GGG | - | chr1_1:44130779-44130798 | Msa0023180:five_prime_UTR | 40.0% |
| GCTCTTCCAAAGCTACATGA+AGG | + | chr1_1:44124833-44124852 | None:intergenic | 45.0% | |
| AGTGAAAGGGATGGTGAAGT+TGG | - | chr1_1:44124910-44124929 | Msa0023180:CDS | 45.0% | |
| GTTATGGAAAGTGGGAAGAG+AGG | - | chr1_1:44124941-44124960 | Msa0023180:intron | 45.0% | |
| TATGGAAAGTGGGAAGAGAG+GGG | - | chr1_1:44124943-44124962 | Msa0023180:intron | 45.0% | |
| ! | TTATTGGGTCTGGGATTGGT+GGG | - | chr1_1:44124993-44125012 | Msa0023180:intron | 45.0% |
| GTTATACCTGGTGGAAGTTC+TGG | - | chr1_1:44125076-44125095 | Msa0023180:intron | 45.0% | |
| TAAAACCCAGAACTTCCACC+AGG | + | chr1_1:44125085-44125104 | None:intergenic | 45.0% | |
| !! | CTGGGTTTTATCATAGGGAG+GGG | - | chr1_1:44125095-44125114 | Msa0023180:intron | 45.0% |
| !! | CGCCACTGGTTTATGCTATT+AGG | + | chr1_1:44125468-44125487 | None:intergenic | 45.0% |
| GCCAGGATTATTGTAAAGCC+CGG | - | chr1_1:44125490-44125509 | Msa0023180:intron | 45.0% | |
| CCAGGATTATTGTAAAGCCC+GGG | - | chr1_1:44125491-44125510 | Msa0023180:intron | 45.0% | |
| ATTATGCTGTGTATCCCAGC+AGG | - | chr1_1:44125894-44125913 | Msa0023180:intron | 45.0% | |
| TTATGCTGTGTATCCCAGCA+GGG | - | chr1_1:44125895-44125914 | Msa0023180:intron | 45.0% | |
| TCATGACCATGAGTTGCCTT+AGG | - | chr1_1:44126174-44126193 | Msa0023180:intron | 45.0% | |
| !! | ACACAAGCATTGGAAGCAGT+TGG | - | chr1_1:44126379-44126398 | Msa0023180:intron | 45.0% |
| AGGCAAAACGCCTTATAAGG+GGG | + | chr1_1:44126597-44126616 | None:intergenic | 45.0% | |
| GAGGCAAAACGCCTTATAAG+GGG | + | chr1_1:44126598-44126617 | None:intergenic | 45.0% | |
| GGAGGCAAAACGCCTTATAA+GGG | + | chr1_1:44126599-44126618 | None:intergenic | 45.0% | |
| GTTGGAGCTAAAATCGCTTG+AGG | - | chr1_1:44126689-44126708 | Msa0023180:intron | 45.0% | |
| TGCAAAGAAGATATGCCAGG+TGG | + | chr1_1:44126864-44126883 | None:intergenic | 45.0% | |
| TTCATTGATAGGGACTAGGG+AGG | - | chr1_1:44126886-44126905 | Msa0023180:CDS | 45.0% | |
| !!! | AGGGAGGCGTTATCTTTTAG+CGG | - | chr1_1:44126902-44126921 | Msa0023180:CDS | 45.0% |
| TGCTTCACTTCAGCAGCTAA+TGG | + | chr1_1:44127009-44127028 | None:intergenic | 45.0% | |
| CATTCTGAATTCCCGTGATC+CGG | + | chr1_1:44127164-44127183 | None:intergenic | 45.0% | |
| GTTGTCTTTCATAGATGCCG+AGG | - | chr1_1:44127561-44127580 | Msa0023180:CDS | 45.0% | |
| AAGCAAAAAGCTAGGTGAGC+AGG | + | chr1_1:44127841-44127860 | None:intergenic | 45.0% | |
| !! | AGATGATGCAGAAGCACCTT+TGG | - | chr1_1:44128178-44128197 | Msa0023180:intron | 45.0% |
| AGAGAGAGCAAGAGAGAAAG+AGG | + | chr1_1:44128295-44128314 | None:intergenic | 45.0% | |
| GTTCTGTGTGACAGACACTT+TGG | - | chr1_1:44128349-44128368 | Msa0023180:intron | 45.0% | |
| TGTGTGACAGACACTTTGGT+GGG | - | chr1_1:44128353-44128372 | Msa0023180:intron | 45.0% | |
| GTGGGATTAACTACCCTCTT+GGG | - | chr1_1:44128371-44128390 | Msa0023180:intron | 45.0% | |
| TGGGATTAACTACCCTCTTG+GGG | - | chr1_1:44128372-44128391 | Msa0023180:intron | 45.0% | |
| ACGAGTATTATCACCGAGCA+GGG | - | chr1_1:44128472-44128491 | Msa0023180:intron | 45.0% | |
| ! | TACTTTTGCAGGTAGGAGTG+AGG | - | chr1_1:44128578-44128597 | Msa0023180:intron | 45.0% |
| CTAACCAAATGTGTCCCATC+TGG | + | chr1_1:44128653-44128672 | None:intergenic | 45.0% | |
| AGGAGAATCACTGCCAAAAG+AGG | - | chr1_1:44128801-44128820 | Msa0023180:intron | 45.0% | |
| TGGTGACAATCTGTATCTGG+TGG | + | chr1_1:44128904-44128923 | None:intergenic | 45.0% | |
| GAACAATTGGACCAGTTTGG+AGG | - | chr1_1:44129027-44129046 | Msa0023180:intron | 45.0% | |
| ACCAGTTTGGAGGAACCATA+TGG | - | chr1_1:44129037-44129056 | Msa0023180:intron | 45.0% | |
| TCCATATGGTTCCTCCAAAC+TGG | + | chr1_1:44129041-44129060 | None:intergenic | 45.0% | |
| TGAAGGATATGACGACCTTC+AGG | + | chr1_1:44129109-44129128 | None:intergenic | 45.0% | |
| TTCTTCAATGGACGATTGGC+AGG | - | chr1_1:44129141-44129160 | Msa0023180:intron | 45.0% | |
| CGAATATGAGGCAAAGAAGC+AGG | - | chr1_1:44129348-44129367 | Msa0023180:intron | 45.0% | |
| ATATGAGGCAAAGAAGCAGG+TGG | - | chr1_1:44129351-44129370 | Msa0023180:intron | 45.0% | |
| ! | TCGATGGATGATCTAAGACC+TGG | + | chr1_1:44129418-44129437 | None:intergenic | 45.0% |
| GTTGGGGGTTAAAAGGTTCA+GGG | + | chr1_1:44129679-44129698 | None:intergenic | 45.0% | |
| AGTTGGGGGTTAAAAGGTTC+AGG | + | chr1_1:44129680-44129699 | None:intergenic | 45.0% | |
| TAACCCCCAACTCTAACTCT+AGG | - | chr1_1:44129688-44129707 | Msa0023180:intron | 45.0% | |
| CTACCTAGAGTTAGAGTTGG+GGG | + | chr1_1:44129694-44129713 | None:intergenic | 45.0% | |
| CCTACCTAGAGTTAGAGTTG+GGG | + | chr1_1:44129695-44129714 | None:intergenic | 45.0% | |
| CCCTACCTAGAGTTAGAGTT+GGG | + | chr1_1:44129696-44129715 | None:intergenic | 45.0% | |
| CCCAACTCTAACTCTAGGTA+GGG | - | chr1_1:44129693-44129712 | Msa0023180:intron | 45.0% | |
| TCCCTACCTAGAGTTAGAGT+TGG | + | chr1_1:44129697-44129716 | None:intergenic | 45.0% | |
| AGCATTCCAAAGGGGTTGTT+AGG | - | chr1_1:44129779-44129798 | Msa0023180:intron | 45.0% | |
| CAGCAATAACACCTTGTCCA+GGG | + | chr1_1:44129971-44129990 | None:intergenic | 45.0% | |
| ACAGCAATAACACCTTGTCC+AGG | + | chr1_1:44129972-44129991 | None:intergenic | 45.0% | |
| CATCGAGTAGCTGCAGATAT+TGG | - | chr1_1:44130017-44130036 | Msa0023180:intron | 45.0% | |
| GCAATAATGAAGGACGGTAC+AGG | + | chr1_1:44130243-44130262 | None:intergenic | 45.0% | |
| AGCACGGCAATAATGAAGGA+CGG | + | chr1_1:44130249-44130268 | None:intergenic | 45.0% | |
| ! | ATAGAACTAGGGCGTTCGAT+CGG | - | chr1_1:44130632-44130651 | Msa0023180:five_prime_UTR | 45.0% |
| !! | AGAATCCGATTTTGGGAGTG+GGG | - | chr1_1:44130780-44130799 | Msa0023180:five_prime_UTR | 45.0% |
| !! | AATAAAAATAAAAATGTAAA+CGG | - | chr1_1:44124572-44124591 | Msa0023180:three_prime_UTR | 5.0% |
| !!! | ACTTTTTATTATTAAAAAAT+AGG | - | chr1_1:44130410-44130429 | Msa0023180:CDS | 5.0% |
| !!! | CTTTTTATTATTAAAAAATA+GGG | - | chr1_1:44130411-44130430 | Msa0023180:CDS | 5.0% |
| ! | GGTGTGATGGTAGATGATGG+GGG | + | chr1_1:44124786-44124805 | None:intergenic | 50.0% |
| GGGTGTGATGGTAGATGATG+GGG | + | chr1_1:44124787-44124806 | None:intergenic | 50.0% | |
| GGGGTGTGATGGTAGATGAT+GGG | + | chr1_1:44124788-44124807 | None:intergenic | 50.0% | |
| TGGGGTGTGATGGTAGATGA+TGG | + | chr1_1:44124789-44124808 | None:intergenic | 50.0% | |
| TCATCTGGGTCACGCTCAAA+TGG | - | chr1_1:44124860-44124879 | Msa0023180:exon | 50.0% | |
| GAAAGGGATGGTGAAGTTGG+AGG | - | chr1_1:44124913-44124932 | Msa0023180:CDS | 50.0% | |
| ! | GTTATTGGGTCTGGGATTGG+TGG | - | chr1_1:44124992-44125011 | Msa0023180:intron | 50.0% |
| CCCGGGCTTTACAATAATCC+TGG | + | chr1_1:44125494-44125513 | None:intergenic | 50.0% | |
| ! | AAAAATTTTGGGCCGGAGCC+CGG | - | chr1_1:44125647-44125666 | Msa0023180:intron | 50.0% |
| GGAAGCAGTTGGTTGTCAGA+TGG | - | chr1_1:44126390-44126409 | Msa0023180:intron | 50.0% | |
| AGCAGTTGGTTGTCAGATGG+AGG | - | chr1_1:44126393-44126412 | Msa0023180:intron | 50.0% | |
| ACTCGAACAGAGAGGTGGTT+TGG | + | chr1_1:44126454-44126473 | None:intergenic | 50.0% | |
| ! | AGGATGCCGTCCTTTTCATG+GGG | + | chr1_1:44126523-44126542 | None:intergenic | 50.0% |
| ! | GAGGATGCCGTCCTTTTCAT+GGG | + | chr1_1:44126524-44126543 | None:intergenic | 50.0% |
| ! | TGAGGATGCCGTCCTTTTCA+TGG | + | chr1_1:44126525-44126544 | None:intergenic | 50.0% |
| CGGAGGCAAAACGCCTTATA+AGG | + | chr1_1:44126600-44126619 | None:intergenic | 50.0% | |
| ! | GAGGAGCCACTCTACCTTTT+TGG | - | chr1_1:44126708-44126727 | Msa0023180:CDS | 50.0% |
| ! | GGCGTTATCTTTTAGCGGTG+AGG | - | chr1_1:44126907-44126926 | Msa0023180:CDS | 50.0% |
| GGACCAAATTGACCGGATCA+CGG | - | chr1_1:44127149-44127168 | Msa0023180:intron | 50.0% | |
| GACCAAATTGACCGGATCAC+GGG | - | chr1_1:44127150-44127169 | Msa0023180:intron | 50.0% | |
| TTCCCGTGATCCGGTCAATT+TGG | + | chr1_1:44127155-44127174 | None:intergenic | 50.0% | |
| ! | GCTATGGCTCCAGCATTTTG+AGG | + | chr1_1:44127514-44127533 | None:intergenic | 50.0% |
| AAAATGCTGGAGCCATAGCC+AGG | - | chr1_1:44127515-44127534 | Msa0023180:intron | 50.0% | |
| !! | TGGAGTCTGCAAAGCGTTGA+CGG | + | chr1_1:44127796-44127815 | None:intergenic | 50.0% |
| AGTGTCTGTCACACAGAACC+TGG | + | chr1_1:44128348-44128367 | None:intergenic | 50.0% | |
| CTGTGTGACAGACACTTTGG+TGG | - | chr1_1:44128352-44128371 | Msa0023180:intron | 50.0% | |
| GGTGGGATTAACTACCCTCT+TGG | - | chr1_1:44128370-44128389 | Msa0023180:intron | 50.0% | |
| GGGATTAACTACCCTCTTGG+GGG | - | chr1_1:44128373-44128392 | Msa0023180:intron | 50.0% | |
| TGGTGGGATTGCAAAGTCCT+TGG | - | chr1_1:44128399-44128418 | Msa0023180:intron | 50.0% | |
| CACGAGTATTATCACCGAGC+AGG | - | chr1_1:44128471-44128490 | Msa0023180:intron | 50.0% | |
| GTAGGAGTGAGGCTTTCAGA+TGG | - | chr1_1:44128589-44128608 | Msa0023180:intron | 50.0% | |
| GCTACCAGATGGGACACATT+TGG | - | chr1_1:44128646-44128665 | Msa0023180:CDS | 50.0% | |
| ACACATGGGGGTTAAAGCAG+AGG | - | chr1_1:44128873-44128892 | Msa0023180:CDS | 50.0% | |
| TCAATGGACGATTGGCAGGT+AGG | - | chr1_1:44129145-44129164 | Msa0023180:intron | 50.0% | |
| CCCCAACTCTAACTCTAGGT+AGG | - | chr1_1:44129692-44129711 | Msa0023180:intron | 50.0% | |
| TCCATAAGTACCCTCGTCAC+GGG | + | chr1_1:44129747-44129766 | None:intergenic | 50.0% | |
| GTCCATAAGTACCCTCGTCA+CGG | + | chr1_1:44129748-44129767 | None:intergenic | 50.0% | |
| ! | TTTGGAATGCTGCGTGGCAT+TGG | + | chr1_1:44129770-44129789 | None:intergenic | 50.0% |
| AATGCCACGCAGCATTCCAA+AGG | - | chr1_1:44129769-44129788 | Msa0023180:intron | 50.0% | |
| ATGCCACGCAGCATTCCAAA+GGG | - | chr1_1:44129770-44129789 | Msa0023180:intron | 50.0% | |
| GGCATTCCTAACAACCCCTT+TGG | + | chr1_1:44129788-44129807 | None:intergenic | 50.0% | |
| !! | TTTTGGACGGCATGCTGCTT+GGG | - | chr1_1:44130453-44130472 | Msa0023180:CDS | 50.0% |
| GCAGCTATAGAATCCCGCAT+TGG | + | chr1_1:44130758-44130777 | None:intergenic | 50.0% | |
| !! | GAATCCGATTTTGGGAGTGG+GGG | - | chr1_1:44130781-44130800 | Msa0023180:five_prime_UTR | 50.0% |
| !! | AATCCGATTTTGGGAGTGGG+GGG | - | chr1_1:44130782-44130801 | Msa0023180:five_prime_UTR | 50.0% |
| !! | GATGGTAGATGATGGGGGTG+TGG | + | chr1_1:44124781-44124800 | None:intergenic | 55.0% |
| ! | ACTTTGGAGGTGGGGTGTGA+TGG | + | chr1_1:44124799-44124818 | None:intergenic | 55.0% |
| TCTGGGTCACGCTCAAATGG+TGG | - | chr1_1:44124863-44124882 | Msa0023180:exon | 55.0% | |
| !! | GGATTGGTGGGTTGGTTGCT+GGG | - | chr1_1:44125005-44125024 | Msa0023180:intron | 55.0% |
| GTTGGTTGCTGGGACTCAGT+TGG | - | chr1_1:44125015-44125034 | Msa0023180:intron | 55.0% | |
| GGGACTCAGTTGGCTGTGAA+AGG | - | chr1_1:44125025-44125044 | Msa0023180:intron | 55.0% | |
| AATAATCCTGGCTCCGCCAC+TGG | + | chr1_1:44125482-44125501 | None:intergenic | 55.0% | |
| ! | AAAATTTTGGGCCGGAGCCC+GGG | - | chr1_1:44125648-44125667 | Msa0023180:intron | 55.0% |
| AGTGTTTATGCCAGCGACCC+CGG | + | chr1_1:44125681-44125700 | None:intergenic | 55.0% | |
| TGTGCACTCGAACAGAGAGG+TGG | + | chr1_1:44126459-44126478 | None:intergenic | 55.0% | |
| CTCTGTGCACTCGAACAGAG+AGG | + | chr1_1:44126462-44126481 | None:intergenic | 55.0% | |
| GTGACTGCAGCCCCCTTATA+AGG | - | chr1_1:44126584-44126603 | Msa0023180:intron | 55.0% | |
| TGACGACCCTCTACACACAC+AGG | - | chr1_1:44127395-44127414 | Msa0023180:intron | 55.0% | |
| GGTGTGCCTGTGTGTGTAGA+GGG | + | chr1_1:44127404-44127423 | None:intergenic | 55.0% | |
| AGGTGTGCCTGTGTGTGTAG+AGG | + | chr1_1:44127405-44127424 | None:intergenic | 55.0% | |
| ! | AACTACCCTCTTGGGGGTGT+TGG | - | chr1_1:44128379-44128398 | Msa0023180:intron | 55.0% |
| ACTTACGGCTTTGCCCTGCT+CGG | + | chr1_1:44128488-44128507 | None:intergenic | 55.0% | |
| AGGTAGGCAATACCGAGCAG+TGG | - | chr1_1:44129161-44129180 | Msa0023180:intron | 55.0% | |
| ACGATACTTAGCCCGTGACG+AGG | - | chr1_1:44129733-44129752 | Msa0023180:intron | 55.0% | |
| CGATACTTAGCCCGTGACGA+GGG | - | chr1_1:44129734-44129753 | Msa0023180:intron | 55.0% | |
| TGCCACGCAGCATTCCAAAG+GGG | - | chr1_1:44129771-44129790 | Msa0023180:intron | 55.0% | |
| !! | AACCCCTTTGGAATGCTGCG+TGG | + | chr1_1:44129776-44129795 | None:intergenic | 55.0% |
| GTTGGAGACAGTTGCTTCCC+TGG | - | chr1_1:44129951-44129970 | Msa0023180:intron | 55.0% | |
| GACAGTTGCTTCCCTGGACA+AGG | - | chr1_1:44129957-44129976 | Msa0023180:intron | 55.0% | |
| AGCAGCATGCCGTCCAAAAC+AGG | + | chr1_1:44130452-44130471 | None:intergenic | 55.0% | |
| !! | GTTTTGGACGGCATGCTGCT+TGG | - | chr1_1:44130452-44130471 | Msa0023180:CDS | 55.0% |
| ! | TGCTGCTTGGGTTGCTTGGT+TGG | - | chr1_1:44130465-44130484 | Msa0023180:CDS | 55.0% |
| ! | TGGGTCTGGGATTGGTGGGT+TGG | - | chr1_1:44124997-44125016 | Msa0023180:intron | 60.0% |
| !! | GGGATTGGTGGGTTGGTTGC+TGG | - | chr1_1:44125004-44125023 | Msa0023180:intron | 60.0% |
| ! | CATAAACCAGTGGCGGAGCC+AGG | - | chr1_1:44125473-44125492 | Msa0023180:intron | 60.0% |
| GTGTTTATGCCAGCGACCCC+GGG | + | chr1_1:44125680-44125699 | None:intergenic | 60.0% | |
| !! | TACCCTCTTGGGGGTGTTGG+TGG | - | chr1_1:44128382-44128401 | Msa0023180:intron | 60.0% |
| !! | ACCCTCTTGGGGGTGTTGGT+GGG | - | chr1_1:44128383-44128402 | Msa0023180:intron | 60.0% |
| TCCCACCAACACCCCCAAGA+GGG | + | chr1_1:44128387-44128406 | None:intergenic | 60.0% | |
| ATCCCACCAACACCCCCAAG+AGG | + | chr1_1:44128388-44128407 | None:intergenic | 60.0% | |
| !! | GCCCGTGACGAGGGTACTTA+TGG | - | chr1_1:44129743-44129762 | Msa0023180:intron | 60.0% |
| ! | GGCATGCTGCTTGGGTTGCT+TGG | - | chr1_1:44130461-44130480 | Msa0023180:CDS | 60.0% |
| TTGTTGGGGAGGGAGGAGAG+CGG | - | chr1_1:44130588-44130607 | Msa0023180:CDS | 60.0% | |
| GGCTTAGCTGCGTGCCAATG+CGG | - | chr1_1:44130741-44130760 | Msa0023180:five_prime_UTR | 60.0% | |
| GCTTAGCTGCGTGCCAATGC+GGG | - | chr1_1:44130742-44130761 | Msa0023180:five_prime_UTR | 60.0% | |
| CAGCCCCCCACTCCCAAAAT+CGG | + | chr1_1:44130788-44130807 | None:intergenic | 60.0% | |
| ! | AGCGACCCCGGGCACTCGCC+CGG | + | chr1_1:44125669-44125688 | None:intergenic | 80.0% |
| ! | CCGGGCACTCGCCCGGGCTC+CGG | + | chr1_1:44125662-44125681 | None:intergenic | 85.0% |
| ! | CCGGAGCCCGGGCGAGTGCC+CGG | - | chr1_1:44125659-44125678 | Msa0023180:intron | 85.0% |
| ! | CGGAGCCCGGGCGAGTGCCC+GGG | - | chr1_1:44125660-44125679 | Msa0023180:intron | 85.0% |
| ! | GGAGCCCGGGCGAGTGCCCG+GGG | - | chr1_1:44125661-44125680 | Msa0023180:intron | 85.0% |
| ! | GCGACCCCGGGCACTCGCCC+GGG | + | chr1_1:44125668-44125687 | None:intergenic | 85.0% |
| ! | GGGCGAGTGCCCGGGGTCGC+TGG | - | chr1_1:44125668-44125687 | Msa0023180:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 44124425 | 44130946 | 44124425 | ID=Msa0023180;Name=Msa0023180 |
| chr1_1 | mRNA | 44124425 | 44130946 | 44124425 | ID=Msa0023180-mRNA-1;Parent=Msa0023180;Name=Msa0023180-mRNA-1;_AED=0.07;_eAED=0.07;_QI=321|1|1|1|1|1|13|441|596 |
| chr1_1 | exon | 44124425 | 44124939 | 44124425 | ID=Msa0023180-mRNA-1:exon:12717;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44125333 | 44125441 | 44125333 | ID=Msa0023180-mRNA-1:exon:12716;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44125551 | 44125661 | 44125551 | ID=Msa0023180-mRNA-1:exon:12715;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44125924 | 44126037 | 44125924 | ID=Msa0023180-mRNA-1:exon:12714;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44126209 | 44126343 | 44126209 | ID=Msa0023180-mRNA-1:exon:12713;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44126435 | 44126583 | 44126435 | ID=Msa0023180-mRNA-1:exon:12712;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44126704 | 44126782 | 44126704 | ID=Msa0023180-mRNA-1:exon:12711;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44126870 | 44127022 | 44126870 | ID=Msa0023180-mRNA-1:exon:12710;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44127538 | 44127594 | 44127538 | ID=Msa0023180-mRNA-1:exon:12709;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44127789 | 44127871 | 44127789 | ID=Msa0023180-mRNA-1:exon:12708;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44128603 | 44128702 | 44128603 | ID=Msa0023180-mRNA-1:exon:12707;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44128804 | 44129010 | 44128804 | ID=Msa0023180-mRNA-1:exon:12706;Parent=Msa0023180-mRNA-1 |
| chr1_1 | exon | 44130206 | 44130946 | 44130206 | ID=Msa0023180-mRNA-1:exon:12705;Parent=Msa0023180-mRNA-1 |
| chr1_1 | five_prime_UTR | 44130626 | 44130946 | 44130626 | ID=Msa0023180-mRNA-1:five_prime_utr;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44130206 | 44130625 | 44130206 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44128804 | 44129010 | 44128804 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44128603 | 44128702 | 44128603 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44127789 | 44127871 | 44127789 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44127538 | 44127594 | 44127538 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44126870 | 44127022 | 44126870 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44126704 | 44126782 | 44126704 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44126435 | 44126583 | 44126435 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44126209 | 44126343 | 44126209 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44125924 | 44126037 | 44125924 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44125551 | 44125661 | 44125551 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44125333 | 44125441 | 44125333 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | CDS | 44124866 | 44124939 | 44124866 | ID=Msa0023180-mRNA-1:cds;Parent=Msa0023180-mRNA-1 |
| chr1_1 | three_prime_UTR | 44124425 | 44124865 | 44124425 | ID=Msa0023180-mRNA-1:three_prime_utr;Parent=Msa0023180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
