Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905590 | XP_003618524.1 | 98.211 | 503 | 9 | 0 | 1 | 503 | 1 | 503 | 0.0 | 997 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905590 | sp|P58223|Y4837_ARATH | 30.645 | 496 | 280 | 15 | 27 | 478 | 11 | 486 | 1.12e-58 | 208 |
| Msa0905590 | sp|P58223|Y4837_ARATH | 30.667 | 300 | 156 | 8 | 45 | 327 | 310 | 574 | 7.30e-21 | 99.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0905590 | 0.804395 | 2.205200e-49 | -8.615850e-47 |
| Msa0010770 | Msa0905590 | 0.809536 | 1.802592e-50 | -8.615850e-47 |
| Msa0012940 | Msa0905590 | 0.803251 | 3.810414e-49 | -8.615850e-47 |
| Msa0022750 | Msa0905590 | -0.804613 | 1.986162e-49 | -8.615850e-47 |
| Msa0039250 | Msa0905590 | 0.822904 | 1.845363e-53 | -8.615850e-47 |
| Msa0041690 | Msa0905590 | 0.812728 | 3.664314e-51 | -8.615850e-47 |
| Msa0043500 | Msa0905590 | 0.802947 | 4.405685e-49 | -8.615850e-47 |
| Msa0043650 | Msa0905590 | 0.802352 | 5.843226e-49 | -8.615850e-47 |
| Msa0046560 | Msa0905590 | 0.812171 | 4.848575e-51 | -8.615850e-47 |
| Msa0047250 | Msa0905590 | 0.803992 | 2.675074e-49 | -8.615850e-47 |
| Msa0047640 | Msa0905590 | 0.843267 | 1.556556e-58 | -8.615850e-47 |
| Msa0054530 | Msa0905590 | 0.834168 | 3.502476e-56 | -8.615850e-47 |
| Msa0054820 | Msa0905590 | 0.821299 | 4.346041e-53 | -8.615850e-47 |
| Msa0069600 | Msa0905590 | 0.800683 | 1.284412e-48 | -8.615850e-47 |
| Msa0070430 | Msa0905590 | 0.803477 | 3.420886e-49 | -8.615850e-47 |
| Msa0074750 | Msa0905590 | 0.837480 | 5.071598e-57 | -8.615850e-47 |
| Msa0080250 | Msa0905590 | 0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0089980 | Msa0905590 | 0.841208 | 5.463356e-58 | -8.615850e-47 |
| Msa0090010 | Msa0905590 | 0.839905 | 1.197604e-57 | -8.615850e-47 |
| Msa0090660 | Msa0905590 | 0.836457 | 9.253483e-57 | -8.615850e-47 |
| Msa0091780 | Msa0905590 | 0.800474 | 1.416865e-48 | -8.615850e-47 |
| Msa0096580 | Msa0905590 | 0.809115 | 2.218816e-50 | -8.615850e-47 |
| Msa0116270 | Msa0905590 | 0.818244 | 2.168823e-52 | -8.615850e-47 |
| Msa0116790 | Msa0905590 | 0.818385 | 2.015040e-52 | -8.615850e-47 |
| Msa0608270 | Msa0905590 | 0.811006 | 8.687275e-51 | -8.615850e-47 |
| Msa0626270 | Msa0905590 | 0.855271 | 7.057254e-62 | -8.615850e-47 |
| Msa0638360 | Msa0905590 | 0.803414 | 3.526325e-49 | -8.615850e-47 |
| Msa0648830 | Msa0905590 | 0.815971 | 7.033694e-52 | -8.615850e-47 |
| Msa0659550 | Msa0905590 | 0.802298 | 5.994494e-49 | -8.615850e-47 |
| Msa0664540 | Msa0905590 | 0.812081 | 5.071451e-51 | -8.615850e-47 |
| Msa0669180 | Msa0905590 | 0.802270 | 6.074476e-49 | -8.615850e-47 |
| Msa0687450 | Msa0905590 | 0.815371 | 9.566467e-52 | -8.615850e-47 |
| Msa0689760 | Msa0905590 | 0.858542 | 7.672556e-63 | -8.615850e-47 |
| Msa0691340 | Msa0905590 | 0.800295 | 1.540813e-48 | -8.615850e-47 |
| Msa0696850 | Msa0905590 | 0.802814 | 4.691715e-49 | -8.615850e-47 |
| Msa0696860 | Msa0905590 | 0.805175 | 1.515727e-49 | -8.615850e-47 |
| Msa0698100 | Msa0905590 | 0.845978 | 2.897244e-59 | -8.615850e-47 |
| Msa0716860 | Msa0905590 | 0.852165 | 5.520969e-61 | -8.615850e-47 |
| Msa0743530 | Msa0905590 | 0.810231 | 1.277298e-50 | -8.615850e-47 |
| Msa0749400 | Msa0905590 | 0.807294 | 5.421956e-50 | -8.615850e-47 |
| Msa0750250 | Msa0905590 | 0.816526 | 5.284598e-52 | -8.615850e-47 |
| Msa0757800 | Msa0905590 | 0.820322 | 7.291978e-53 | -8.615850e-47 |
| Msa0760770 | Msa0905590 | 0.802315 | 5.948143e-49 | -8.615850e-47 |
| Msa0788120 | Msa0905590 | 0.809486 | 1.848054e-50 | -8.615850e-47 |
| Msa0789560 | Msa0905590 | 0.818462 | 1.935663e-52 | -8.615850e-47 |
| Msa0133720 | Msa0905590 | 0.819953 | 8.857737e-53 | -8.615850e-47 |
| Msa0133820 | Msa0905590 | 0.838612 | 2.593602e-57 | -8.615850e-47 |
| Msa0138210 | Msa0905590 | 0.816822 | 4.535798e-52 | -8.615850e-47 |
| Msa0141400 | Msa0905590 | 0.818933 | 1.513441e-52 | -8.615850e-47 |
| Msa0146080 | Msa0905590 | 0.807035 | 6.153255e-50 | -8.615850e-47 |
| Msa0183420 | Msa0905590 | 0.810560 | 1.084775e-50 | -8.615850e-47 |
| Msa0194860 | Msa0905590 | 0.810357 | 1.199841e-50 | -8.615850e-47 |
| Msa0204250 | Msa0905590 | 0.802046 | 6.755045e-49 | -8.615850e-47 |
| Msa0230370 | Msa0905590 | 0.807973 | 3.889999e-50 | -8.615850e-47 |
| Msa0394690 | Msa0905590 | 0.816369 | 5.731160e-52 | -8.615850e-47 |
| Msa0395980 | Msa0905590 | 0.800269 | 1.560030e-48 | -8.615850e-47 |
| Msa0423840 | Msa0905590 | 0.828351 | 9.434625e-55 | -8.615850e-47 |
| Msa0432160 | Msa0905590 | 0.807230 | 5.594629e-50 | -8.615850e-47 |
| Msa0432170 | Msa0905590 | 0.815187 | 1.051048e-51 | -8.615850e-47 |
| Msa0450360 | Msa0905590 | 0.805808 | 1.116120e-49 | -8.615850e-47 |
| Msa0473980 | Msa0905590 | 0.827306 | 1.682889e-54 | -8.615850e-47 |
| Msa0476680 | Msa0905590 | 0.802802 | 4.719895e-49 | -8.615850e-47 |
| Msa0480780 | Msa0905590 | 0.800565 | 1.357835e-48 | -8.615850e-47 |
| Msa0244380 | Msa0905590 | 0.804711 | 1.894573e-49 | -8.615850e-47 |
| Msa0263710 | Msa0905590 | 0.801758 | 7.739587e-49 | -8.615850e-47 |
| Msa0279390 | Msa0905590 | 0.820236 | 7.629130e-53 | -8.615850e-47 |
| Msa0279850 | Msa0905590 | 0.816809 | 4.565406e-52 | -8.615850e-47 |
| Msa0302890 | Msa0905590 | 0.827842 | 1.250918e-54 | -8.615850e-47 |
| Msa0303520 | Msa0905590 | 0.803662 | 3.132376e-49 | -8.615850e-47 |
| Msa0304840 | Msa0905590 | 0.805177 | 1.513888e-49 | -8.615850e-47 |
| Msa0307860 | Msa0905590 | 0.813837 | 2.090862e-51 | -8.615850e-47 |
| Msa0318880 | Msa0905590 | 0.816399 | 5.642592e-52 | -8.615850e-47 |
| Msa0322900 | Msa0905590 | 0.824680 | 7.079809e-54 | -8.615850e-47 |
| Msa0341230 | Msa0905590 | 0.803192 | 3.919443e-49 | -8.615850e-47 |
| Msa0347950 | Msa0905590 | 0.803637 | 3.170301e-49 | -8.615850e-47 |
| Msa0347990 | Msa0905590 | 0.823294 | 1.496352e-53 | -8.615850e-47 |
| Msa0510290 | Msa0905590 | 0.809353 | 1.972850e-50 | -8.615850e-47 |
| Msa0511150 | Msa0905590 | 0.801950 | 7.068083e-49 | -8.615850e-47 |
| Msa0513370 | Msa0905590 | 0.800746 | 1.246969e-48 | -8.615850e-47 |
| Msa0516120 | Msa0905590 | 0.825526 | 4.466799e-54 | -8.615850e-47 |
| Msa0518960 | Msa0905590 | 0.811268 | 7.620078e-51 | -8.615850e-47 |
| Msa0544730 | Msa0905590 | 0.830278 | 3.213239e-55 | -8.615850e-47 |
| Msa0547680 | Msa0905590 | 0.806788 | 6.939120e-50 | -8.615850e-47 |
| Msa0583500 | Msa0905590 | 0.825836 | 3.772132e-54 | -8.615850e-47 |
| Msa0588120 | Msa0905590 | 0.805273 | 1.445609e-49 | -8.615850e-47 |
| Msa0597770 | Msa0905590 | 0.841258 | 5.299083e-58 | -8.615850e-47 |
| Msa0903780 | Msa0905590 | 0.817130 | 3.867581e-52 | -8.615850e-47 |
| Msa0905590 | Msa0937430 | 0.977017 | 6.001624e-143 | -8.615850e-47 |
| Msa0905590 | Msa0945240 | 0.802385 | 5.752491e-49 | -8.615850e-47 |
| Msa0905590 | Msa0969330 | 0.857380 | 1.697562e-62 | -8.615850e-47 |
| Msa0905590 | Msa0996020 | 0.829486 | 5.011447e-55 | -8.615850e-47 |
| Msa0905590 | Msa0998590 | 0.803293 | 3.735658e-49 | -8.615850e-47 |
| Msa0905590 | Msa1010070 | 0.822591 | 2.182268e-53 | -8.615850e-47 |
| Msa0905590 | Msa1010460 | 0.809925 | 1.486712e-50 | -8.615850e-47 |
| Msa0905590 | Msa1072600 | 0.848633 | 5.411068e-60 | -8.615850e-47 |
| Msa0905590 | Msa1095790 | 0.853472 | 2.336078e-61 | -8.615850e-47 |
| Msa0905590 | Msa1098890 | 0.821423 | 4.070895e-53 | -8.615850e-47 |
| Msa0905590 | Msa1122780 | 0.811400 | 7.134859e-51 | -8.615850e-47 |
| Msa0905590 | Msa1127430 | 0.839365 | 1.655146e-57 | -8.615850e-47 |
| Msa0905590 | Msa1127540 | 0.819249 | 1.282400e-52 | -8.615850e-47 |
| Msa0905590 | Msa1143710 | 0.804610 | 1.988567e-49 | -8.615850e-47 |
| Msa0905590 | Msa1168550 | 0.800634 | 1.314386e-48 | -8.615850e-47 |
| Msa0905590 | Msa1168590 | 0.807785 | 4.264926e-50 | -8.615850e-47 |
| Msa0905590 | Msa1169720 | 0.800795 | 1.218514e-48 | -8.615850e-47 |
| Msa0905590 | Msa1201640 | 0.833977 | 3.910754e-56 | -8.615850e-47 |
| Msa0905590 | Msa1211340 | 0.807414 | 5.114397e-50 | -8.615850e-47 |
| Msa0905590 | Msa1213810 | 0.809973 | 1.451858e-50 | -8.615850e-47 |
| Msa0905590 | Msa1214320 | 0.803118 | 4.060681e-49 | -8.615850e-47 |
| Msa0905590 | Msa1215070 | 0.805558 | 1.259802e-49 | -8.615850e-47 |
| Msa0905590 | Msa1254620 | 0.846734 | 1.802951e-59 | -8.615850e-47 |
| Msa0905590 | Msa1282500 | 0.813283 | 2.768370e-51 | -8.615850e-47 |
| Msa0905590 | Msa1329790 | 0.807200 | 5.677726e-50 | -8.615850e-47 |
| Msa0905590 | Msa1335690 | 0.812301 | 4.542998e-51 | -8.615850e-47 |
| Msa0905590 | Msa1336040 | 0.822253 | 2.615285e-53 | -8.615850e-47 |
| Msa0905590 | Msa1354200 | 0.821347 | 4.236944e-53 | -8.615850e-47 |
| Msa0905590 | Msa1364430 | 0.830089 | 3.573254e-55 | -8.615850e-47 |
| Msa0905590 | Msa1366550 | 0.830692 | 2.544397e-55 | -8.615850e-47 |
| Msa0905590 | Msa1391720 | 0.831140 | 1.976551e-55 | -8.615850e-47 |
| Msa0905590 | Msa1393820 | 0.852652 | 4.010281e-61 | -8.615850e-47 |
| Msa0905590 | Msa1420250 | 0.856427 | 3.241276e-62 | -8.615850e-47 |
| Msa0905590 | Msa1426910 | 0.838211 | 3.289621e-57 | -8.615850e-47 |
| Msa0905590 | Msa1434040 | 0.800057 | 1.722538e-48 | -8.615850e-47 |
| Msa0905590 | Msa1443310 | 0.831220 | 1.888430e-55 | -8.615850e-47 |
| Msa0905590 | Msa1463010 | 0.832491 | 9.170136e-56 | -8.615850e-47 |
| Msa0905590 | Msa1463030 | 0.828948 | 6.767523e-55 | -8.615850e-47 |
| Msa0905590 | Msa1467000 | 0.818860 | 1.571919e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905590 | MtrunA17_Chr6g0453421 | 98.211 | 503 | 9 | 0 | 1 | 503 | 1 | 503 | 0.0 | 997 |
| Msa0905590 | MtrunA17_Chr7g0217681 | 68.919 | 518 | 143 | 10 | 1 | 504 | 1 | 514 | 0.0 | 623 |
| Msa0905590 | MtrunA17_Chr2g0285771 | 34.426 | 549 | 283 | 20 | 11 | 501 | 5 | 534 | 1.85e-82 | 269 |
| Msa0905590 | MtrunA17_Chr2g0285771 | 28.875 | 329 | 179 | 9 | 45 | 341 | 311 | 616 | 1.22e-26 | 114 |
| Msa0905590 | MtrunA17_Chr3g0140741 | 37.473 | 459 | 217 | 11 | 47 | 451 | 32 | 474 | 1.63e-72 | 243 |
| Msa0905590 | MtrunA17_Chr3g0140741 | 32.906 | 234 | 125 | 6 | 45 | 277 | 310 | 512 | 8.14e-32 | 130 |
| Msa0905590 | MtrunA17_Chr8g0376551 | 31.589 | 535 | 284 | 15 | 25 | 498 | 22 | 535 | 7.81e-65 | 222 |
| Msa0905590 | MtrunA17_Chr8g0376551 | 30.032 | 313 | 172 | 10 | 45 | 330 | 313 | 605 | 8.75e-26 | 111 |
| Msa0905590 | MtrunA17_Chr4g0049801 | 35.698 | 437 | 242 | 12 | 40 | 451 | 13 | 435 | 1.26e-61 | 213 |
| Msa0905590 | MtrunA17_Chr4g0049801 | 30.462 | 325 | 169 | 9 | 44 | 322 | 263 | 576 | 7.55e-34 | 135 |
| Msa0905590 | MtrunA17_Chr4g0002241 | 33.023 | 430 | 251 | 9 | 32 | 460 | 3 | 396 | 2.42e-57 | 201 |
| Msa0905590 | MtrunA17_Chr4g0002241 | 33.333 | 207 | 123 | 4 | 10 | 216 | 191 | 382 | 5.93e-28 | 118 |
| Msa0905590 | MtrunA17_Chr3g0127051 | 31.166 | 446 | 246 | 12 | 47 | 451 | 63 | 488 | 2.22e-49 | 180 |
| Msa0905590 | MtrunA17_Chr3g0127051 | 39.459 | 185 | 93 | 6 | 290 | 455 | 64 | 248 | 4.65e-22 | 100 |
| Msa0905590 | MtrunA17_Chr3g0127051 | 26.752 | 314 | 189 | 10 | 45 | 338 | 329 | 621 | 3.91e-17 | 84.7 |
| Msa0905590 | MtrunA17_Chr5g0412061 | 30.485 | 433 | 279 | 11 | 33 | 454 | 25 | 446 | 1.12e-45 | 169 |
| Msa0905590 | MtrunA17_Chr5g0412061 | 25.589 | 297 | 199 | 7 | 48 | 330 | 276 | 564 | 5.83e-19 | 90.5 |
| Msa0905590 | MtrunA17_Chr7g0250921 | 58.451 | 142 | 26 | 2 | 350 | 491 | 12 | 120 | 2.50e-43 | 152 |
| Msa0905590 | MtrunA17_Chr2g0279641 | 43.023 | 172 | 91 | 3 | 287 | 451 | 329 | 500 | 4.70e-32 | 131 |
| Msa0905590 | MtrunA17_Chr2g0279641 | 36.872 | 179 | 104 | 2 | 43 | 219 | 327 | 498 | 1.62e-30 | 126 |
| Msa0905590 | MtrunA17_Chr2g0279641 | 26.087 | 414 | 229 | 13 | 49 | 445 | 50 | 403 | 1.14e-26 | 114 |
| Msa0905590 | MtrunA17_Chr2g0279641 | 28.033 | 239 | 141 | 7 | 238 | 456 | 2 | 229 | 1.82e-13 | 73.6 |
| Msa0905590 | MtrunA17_Chr7g0249721 | 34.783 | 184 | 106 | 4 | 45 | 222 | 98 | 273 | 3.19e-25 | 106 |
| Msa0905590 | MtrunA17_Chr7g0249721 | 32.420 | 219 | 120 | 9 | 255 | 449 | 56 | 270 | 4.00e-14 | 73.6 |
| Msa0905590 | MtrunA17_Chr7g0274301 | 36.842 | 171 | 98 | 4 | 46 | 216 | 114 | 274 | 1.11e-24 | 107 |
| Msa0905590 | MtrunA17_Chr7g0274301 | 25.871 | 201 | 128 | 4 | 255 | 453 | 100 | 281 | 7.70e-15 | 77.0 |
| Msa0905590 | MtrunA17_Chr1g0184511 | 36.416 | 173 | 100 | 3 | 46 | 216 | 164 | 328 | 1.78e-24 | 107 |
| Msa0905590 | MtrunA17_Chr1g0184511 | 32.558 | 172 | 110 | 3 | 288 | 453 | 164 | 335 | 2.93e-15 | 78.6 |
| Msa0905590 | MtrunA17_Chr2g0298721 | 32.571 | 175 | 107 | 3 | 46 | 217 | 69 | 235 | 1.11e-19 | 92.0 |
| Msa0905590 | MtrunA17_Chr2g0298721 | 31.844 | 179 | 110 | 3 | 292 | 463 | 73 | 246 | 6.57e-17 | 83.6 |
| Msa0905590 | MtrunA17_Chr4g0071791 | 31.977 | 172 | 108 | 2 | 48 | 217 | 45 | 209 | 5.86e-18 | 86.3 |
| Msa0905590 | MtrunA17_Chr4g0071791 | 31.633 | 196 | 119 | 4 | 279 | 460 | 27 | 221 | 7.54e-15 | 77.0 |
| Msa0905590 | MtrunA17_Chr1g0197441 | 25.517 | 290 | 182 | 11 | 47 | 331 | 36 | 296 | 4.71e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905590 | AT5G15270.3 | 64.386 | 497 | 164 | 8 | 6 | 500 | 11 | 496 | 0.0 | 634 |
| Msa0905590 | AT5G15270.2 | 64.386 | 497 | 164 | 8 | 6 | 500 | 11 | 496 | 0.0 | 634 |
| Msa0905590 | AT5G15270.1 | 64.386 | 497 | 164 | 8 | 6 | 500 | 11 | 496 | 0.0 | 634 |
| Msa0905590 | AT1G14170.3 | 51.335 | 487 | 198 | 11 | 7 | 483 | 6 | 463 | 2.65e-142 | 419 |
| Msa0905590 | AT1G14170.1 | 51.648 | 455 | 185 | 9 | 38 | 483 | 10 | 438 | 6.04e-135 | 400 |
| Msa0905590 | AT1G14170.2 | 51.225 | 449 | 186 | 8 | 43 | 483 | 7 | 430 | 5.19e-133 | 394 |
| Msa0905590 | AT5G46190.1 | 34.698 | 464 | 240 | 15 | 38 | 454 | 33 | 480 | 6.16e-68 | 231 |
| Msa0905590 | AT5G46190.4 | 34.698 | 464 | 240 | 15 | 38 | 454 | 33 | 480 | 6.16e-68 | 231 |
| Msa0905590 | AT5G46190.3 | 34.698 | 464 | 240 | 15 | 38 | 454 | 33 | 480 | 6.16e-68 | 231 |
| Msa0905590 | AT5G46190.2 | 34.698 | 464 | 240 | 15 | 38 | 454 | 33 | 480 | 1.94e-67 | 231 |
| Msa0905590 | AT4G18375.3 | 30.645 | 496 | 280 | 15 | 27 | 478 | 11 | 486 | 2.32e-60 | 208 |
| Msa0905590 | AT4G18375.2 | 30.645 | 496 | 280 | 15 | 27 | 478 | 11 | 486 | 1.14e-59 | 208 |
| Msa0905590 | AT4G18375.2 | 30.667 | 300 | 156 | 8 | 45 | 327 | 310 | 574 | 7.43e-22 | 99.8 |
| Msa0905590 | AT5G53060.3 | 34.642 | 433 | 240 | 14 | 47 | 451 | 68 | 485 | 1.07e-57 | 202 |
| Msa0905590 | AT1G51580.1 | 30.599 | 451 | 239 | 11 | 45 | 451 | 17 | 437 | 3.22e-57 | 202 |
| Msa0905590 | AT1G51580.1 | 34.286 | 175 | 102 | 2 | 42 | 216 | 271 | 432 | 4.57e-25 | 109 |
| Msa0905590 | AT5G53060.1 | 34.491 | 432 | 242 | 13 | 47 | 451 | 68 | 485 | 6.53e-57 | 202 |
| Msa0905590 | AT2G03110.2 | 50.980 | 153 | 64 | 4 | 80 | 222 | 1 | 152 | 6.66e-39 | 139 |
| Msa0905590 | AT2G03110.1 | 50.980 | 153 | 64 | 4 | 80 | 222 | 1 | 152 | 6.66e-39 | 139 |
| Msa0905590 | AT2G03110.3 | 50.980 | 153 | 64 | 4 | 80 | 222 | 1 | 152 | 6.66e-39 | 139 |
| Msa0905590 | AT5G64390.2 | 38.983 | 177 | 97 | 3 | 42 | 216 | 447 | 614 | 2.71e-31 | 129 |
| Msa0905590 | AT5G64390.2 | 34.466 | 206 | 112 | 4 | 22 | 213 | 22 | 218 | 1.70e-24 | 108 |
| Msa0905590 | AT5G64390.2 | 34.595 | 185 | 112 | 4 | 274 | 451 | 437 | 619 | 1.78e-24 | 108 |
| Msa0905590 | AT5G64390.2 | 32.948 | 173 | 93 | 5 | 290 | 442 | 48 | 217 | 6.39e-14 | 75.5 |
| Msa0905590 | AT5G64390.3 | 38.983 | 177 | 97 | 3 | 42 | 216 | 447 | 614 | 3.07e-31 | 129 |
| Msa0905590 | AT5G64390.3 | 34.466 | 206 | 112 | 4 | 22 | 213 | 22 | 218 | 1.86e-24 | 108 |
| Msa0905590 | AT5G64390.3 | 34.595 | 185 | 112 | 4 | 274 | 451 | 437 | 619 | 1.94e-24 | 108 |
| Msa0905590 | AT5G64390.3 | 32.948 | 173 | 93 | 5 | 290 | 442 | 48 | 217 | 7.28e-14 | 75.1 |
| Msa0905590 | AT5G64390.1 | 38.983 | 177 | 97 | 3 | 42 | 216 | 447 | 614 | 3.12e-31 | 129 |
| Msa0905590 | AT5G64390.1 | 34.595 | 185 | 112 | 4 | 274 | 451 | 437 | 619 | 1.87e-24 | 108 |
| Msa0905590 | AT5G64390.1 | 34.466 | 206 | 112 | 4 | 22 | 213 | 22 | 218 | 1.98e-24 | 108 |
| Msa0905590 | AT5G64390.1 | 32.948 | 173 | 93 | 5 | 290 | 442 | 48 | 217 | 6.82e-14 | 75.1 |
| Msa0905590 | AT2G22600.1 | 27.533 | 454 | 255 | 14 | 45 | 454 | 23 | 446 | 1.36e-27 | 117 |
| Msa0905590 | AT2G22600.1 | 27.679 | 224 | 131 | 5 | 20 | 239 | 267 | 463 | 9.76e-11 | 65.1 |
| Msa0905590 | AT4G18375.1 | 33.193 | 238 | 133 | 5 | 233 | 457 | 33 | 257 | 4.89e-26 | 110 |
| Msa0905590 | AT4G18375.1 | 29.747 | 316 | 168 | 9 | 45 | 341 | 97 | 377 | 2.06e-22 | 99.8 |
| Msa0905590 | AT3G04610.2 | 27.660 | 329 | 173 | 11 | 46 | 327 | 186 | 496 | 1.42e-24 | 108 |
| Msa0905590 | AT3G04610.2 | 28.090 | 178 | 122 | 3 | 288 | 460 | 186 | 362 | 2.01e-15 | 79.7 |
| Msa0905590 | AT3G04610.1 | 27.660 | 329 | 173 | 11 | 46 | 327 | 186 | 496 | 1.42e-24 | 108 |
| Msa0905590 | AT3G04610.1 | 28.090 | 178 | 122 | 3 | 288 | 460 | 186 | 362 | 2.01e-15 | 79.7 |
| Msa0905590 | AT3G04610.3 | 27.660 | 329 | 173 | 11 | 46 | 327 | 162 | 472 | 1.66e-24 | 107 |
| Msa0905590 | AT3G04610.3 | 28.090 | 178 | 122 | 3 | 288 | 460 | 162 | 338 | 2.60e-15 | 79.3 |
| Msa0905590 | AT3G04610.4 | 27.660 | 329 | 173 | 11 | 46 | 327 | 162 | 472 | 1.66e-24 | 107 |
| Msa0905590 | AT3G04610.4 | 28.090 | 178 | 122 | 3 | 288 | 460 | 162 | 338 | 2.60e-15 | 79.3 |
| Msa0905590 | AT5G09560.1 | 25.725 | 517 | 290 | 18 | 45 | 486 | 28 | 525 | 2.03e-24 | 107 |
| Msa0905590 | AT4G26000.1 | 25.532 | 329 | 196 | 8 | 46 | 337 | 73 | 389 | 7.88e-19 | 90.1 |
| Msa0905590 | AT4G26000.1 | 31.250 | 176 | 113 | 3 | 292 | 460 | 77 | 251 | 2.26e-14 | 76.3 |
| Msa0905590 | AT5G04430.2 | 27.835 | 291 | 174 | 10 | 47 | 331 | 35 | 295 | 4.60e-17 | 83.2 |
| Msa0905590 | AT5G04430.1 | 27.083 | 288 | 159 | 10 | 47 | 331 | 35 | 274 | 3.47e-13 | 71.2 |
| Msa0905590 | AT5G53060.2 | 37.209 | 129 | 60 | 5 | 47 | 159 | 68 | 191 | 1.55e-12 | 67.0 |
Find 168 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCTCTTGTTGGTCCTTA+TGG | 0.120314 | 6_2:-3759267 | Msa0905590:CDS |
| TGCTTTCTTGATTAGATTTC+GGG | 0.149531 | 6_2:-3758458 | Msa0905590:intron |
| CCTTTGTAATGTCACAATTT+AGG | 0.172808 | 6_2:+3761743 | None:intergenic |
| CTCCTCTTGTTGGTCCTTAT+GGG | 0.178377 | 6_2:-3759266 | Msa0905590:CDS |
| GCACGAATTGGCTGCCTTAT+TGG | 0.195380 | 6_2:-3758691 | Msa0905590:CDS |
| CTTTGACAGTATGCGAATAT+TGG | 0.223025 | 6_2:+3758624 | None:intergenic |
| AGAAAGATTGGTAGTATTAT+TGG | 0.242270 | 6_2:-3760453 | Msa0905590:CDS |
| CAGAATTTACGTAGTGAAAC+TGG | 0.258753 | 6_2:-3760120 | Msa0905590:CDS |
| GGAGCAGTTTGTGATTAATA+AGG | 0.280124 | 6_2:-3760508 | Msa0905590:CDS |
| AACTTGCACAAGAGCATCTT+TGG | 0.282982 | 6_2:+3758421 | None:intergenic |
| AATCAAATAAGGCAGGATTC+TGG | 0.284752 | 6_2:-3759093 | Msa0905590:CDS |
| GGAAACCTTGGCGGCGTGAT+AGG | 0.286167 | 6_2:-3759135 | Msa0905590:CDS |
| GATCAGATAGGTTGTGTTCT+TGG | 0.294583 | 6_2:-3760162 | Msa0905590:CDS |
| GTTCGATTGGTTTGTCCAAC+TGG | 0.320110 | 6_2:-3759156 | Msa0905590:CDS |
| CTAGTCAGAACAATGTTTCT+AGG | 0.336990 | 6_2:-3756098 | Msa0905590:CDS |
| GTTCACCTCTTTAGTTGAAA+TGG | 0.342169 | 6_2:+3759020 | None:intergenic |
| TGCAGAACTATCAACTTTGA+TGG | 0.352192 | 6_2:+3759065 | None:intergenic |
| GGATGCTGCAGTTGTGAAAA+AGG | 0.356643 | 6_2:-3759427 | Msa0905590:CDS |
| GTGGGGATGGCTCCTCTTGT+TGG | 0.359180 | 6_2:-3759276 | Msa0905590:CDS |
| GAGGCATAATAAATCAAATA+AGG | 0.359602 | 6_2:-3759104 | Msa0905590:CDS |
| CTTCACACATCTCGGCTGTT+TGG | 0.362345 | 6_2:+3755859 | Msa0905580:CDS |
| TCTACTGGAGCAGGAATATA+TGG | 0.362425 | 6_2:+3758332 | None:intergenic |
| ATCAAATAAGGCAGGATTCT+GGG | 0.366431 | 6_2:-3759092 | Msa0905590:CDS |
| TAGATCCTCCTTTACCAATA+AGG | 0.367203 | 6_2:+3758677 | None:intergenic |
| CATTGTTTAAGATTCATGAT+AGG | 0.377502 | 6_2:-3760263 | Msa0905590:CDS |
| CAAAGAGAAAGAAATAATTA+TGG | 0.378615 | 6_2:-3760609 | Msa0905590:CDS |
| GTGAGATAGTTAAGCAATTG+AGG | 0.389238 | 6_2:-3760422 | Msa0905590:CDS |
| GATAGAGAGGGTGCTGTCCC+TGG | 0.396068 | 6_2:-3758371 | Msa0905590:CDS |
| GGCTCAGATTCGTATTCTTA+AGG | 0.398785 | 6_2:-3760097 | Msa0905590:CDS |
| CTGTCATAGTTAAGAACATC+TGG | 0.412089 | 6_2:+3758305 | None:intergenic |
| CTCCGCCGTCATAGTCAGAC+TGG | 0.412114 | 6_2:+3760571 | None:intergenic |
| AATAACCATTTCAACTAAAG+AGG | 0.425835 | 6_2:-3759025 | Msa0905590:intron |
| ATGACGGCGGAGGAAATAAA+AGG | 0.433275 | 6_2:-3760560 | Msa0905590:CDS |
| TCCCAGTGGTGGTTCACTCA+TGG | 0.435069 | 6_2:-3759322 | Msa0905590:CDS |
| AGGATCGGTGAGACTGTGCC+GGG | 0.437873 | 6_2:-3760378 | Msa0905590:CDS |
| GCAGGAATATATGGTAGAAC+TGG | 0.442280 | 6_2:+3758341 | None:intergenic |
| TTGTGTCCGGGGAGAAAGAT+TGG | 0.447867 | 6_2:-3760465 | Msa0905590:CDS |
| TATATTCCTGCTCCAGTAGA+TGG | 0.449132 | 6_2:-3758329 | Msa0905590:CDS |
| TCTCGAACTCAGCATTTACT+TGG | 0.450339 | 6_2:-3759366 | Msa0905590:CDS |
| TGAGATAGTTAAGCAATTGA+GGG | 0.451341 | 6_2:-3760421 | Msa0905590:CDS |
| TCCTCTTGTTGGTCCTTATG+GGG | 0.452392 | 6_2:-3759265 | Msa0905590:CDS |
| AGAACATCTGGACCATCTAC+TGG | 0.453048 | 6_2:+3758317 | None:intergenic |
| TTGGTATCATCAGCACGAAT+TGG | 0.454187 | 6_2:-3758703 | Msa0905590:CDS |
| CCCAGTGGTGGTTCACTCAT+GGG | 0.456030 | 6_2:-3759321 | Msa0905590:CDS |
| GGTAGAACTGGAAGGAATCC+AGG | 0.467927 | 6_2:+3758353 | None:intergenic |
| ACCCATGAGTGAACCACCAC+TGG | 0.471238 | 6_2:+3759320 | None:intergenic |
| TCTCGGCTGTTTGGATGGTA+AGG | 0.472841 | 6_2:+3755868 | Msa0905580:CDS |
| CCAACAGCTTAGCATTCACT+TGG | 0.476223 | 6_2:+3760193 | None:intergenic |
| TGCTTCTGATGATGATGAAA+TGG | 0.478394 | 6_2:-3758584 | Msa0905590:CDS |
| GATTGGTAGTATTATTGGTA+GGG | 0.478480 | 6_2:-3760448 | Msa0905590:CDS |
| AAAGTTGATAGTTCTGCAAA+AGG | 0.479021 | 6_2:-3759060 | Msa0905590:CDS |
| GCAATTGAGGGTAGAAACTA+AGG | 0.479035 | 6_2:-3760409 | Msa0905590:CDS |
| TAAAAGCACGGCTGCCTCTA+CGG | 0.480414 | 6_2:+3758789 | None:intergenic |
| ATTGTTTAAGATTCATGATA+GGG | 0.480776 | 6_2:-3760262 | Msa0905590:CDS |
| ATAGGTTGTGTTCTTGGAAA+AGG | 0.484775 | 6_2:-3760156 | Msa0905590:CDS |
| GGAATGGAGGTGATCATGAC+AGG | 0.484928 | 6_2:-3760536 | Msa0905590:CDS |
| AGGACCTCCGATTGTGGGGA+TGG | 0.487016 | 6_2:-3759289 | Msa0905590:CDS |
| TGAAGATTTACAGAGTGATC+AGG | 0.487322 | 6_2:-3760232 | Msa0905590:CDS |
| AACTGCAGGACCTCCGATTG+TGG | 0.487570 | 6_2:-3759295 | Msa0905590:CDS |
| GAGGTGATCATGACAGGGAT+AGG | 0.494577 | 6_2:-3760530 | Msa0905590:CDS |
| CATAATAAATCAAATAAGGC+AGG | 0.496498 | 6_2:-3759100 | Msa0905590:CDS |
| GAAGAAGATATTTCATCCCT+CGG | 0.499062 | 6_2:+3759192 | None:intergenic |
| TTAAACAATGCATCCTCAGC+AGG | 0.501300 | 6_2:+3760276 | None:intergenic |
| CAATATTCGCATACTGTCAA+AGG | 0.501644 | 6_2:-3758623 | Msa0905590:CDS |
| AGAATTTACGTAGTGAAACT+GGG | 0.506241 | 6_2:-3760119 | Msa0905590:CDS |
| TCACTCATGGGTCCAACTGC+AGG | 0.507662 | 6_2:-3759309 | Msa0905590:CDS |
| TAGAAACTAAGGCTAAGATT+AGG | 0.513118 | 6_2:-3760398 | Msa0905590:CDS |
| GAAACCTTGGCGGCGTGATA+GGG | 0.514629 | 6_2:-3759134 | Msa0905590:CDS |
| ACACATCTCGGCTGTTTGGA+TGG | 0.516681 | 6_2:+3755863 | Msa0905580:CDS |
| AGAGGAGCCATCCCCACAAT+CGG | 0.517053 | 6_2:+3759282 | None:intergenic |
| CATTCATATTCAAGTGGCTA+TGG | 0.517078 | 6_2:-3758254 | Msa0905590:CDS |
| ATTGGCTGCCTTATTGGTAA+AGG | 0.517590 | 6_2:-3758685 | Msa0905590:CDS |
| ATTGGTAGTATTATTGGTAG+GGG | 0.520404 | 6_2:-3760447 | Msa0905590:CDS |
| CTGGCGGGCTTCACACATCT+CGG | 0.521276 | 6_2:+3755851 | Msa0905580:CDS |
| CAGCACCCTCTCTATCGAAA+AGG | 0.521846 | 6_2:+3758378 | None:intergenic |
| AGCACGGCTGCCTCTACGGT+TGG | 0.522327 | 6_2:+3758793 | None:intergenic |
| TGTTTGGATGGTAAGGGAAA+GGG | 0.523898 | 6_2:+3755875 | Msa0905580:CDS |
| ACTGCAGGACCTCCGATTGT+GGG | 0.525961 | 6_2:-3759294 | Msa0905590:CDS |
| ATAAAGGTGACACTGGTGAC+TGG | 0.529820 | 6_2:-3759239 | Msa0905590:CDS |
| GTTTGTCCAACTGGAAACCT+TGG | 0.534021 | 6_2:-3759147 | Msa0905590:CDS |
| AGATTGGTAGTATTATTGGT+AGG | 0.534949 | 6_2:-3760449 | Msa0905590:CDS |
| TGTCCAACTGGAAACCTTGG+CGG | 0.534979 | 6_2:-3759144 | Msa0905590:CDS |
| TAGGATCGGTGAGACTGTGC+CGG | 0.535129 | 6_2:-3760379 | Msa0905590:CDS |
| CAGAGTGATCAGGAGGAAGA+AGG | 0.537264 | 6_2:-3760222 | Msa0905590:CDS |
| TCTGGACCATCTACTGGAGC+AGG | 0.538662 | 6_2:+3758323 | None:intergenic |
| CCTCTTGTTGGTCCTTATGG+GGG | 0.538953 | 6_2:-3759264 | Msa0905590:CDS |
| GTCTATGTACTCGGCTCCGA+GGG | 0.539900 | 6_2:-3759208 | Msa0905590:CDS |
| GGTTGTGTTCTTGGAAAAGG+TGG | 0.543414 | 6_2:-3760153 | Msa0905590:CDS |
| GGTAGTATTATTGGTAGGGG+AGG | 0.545293 | 6_2:-3760444 | Msa0905590:CDS |
| ATGTTCTTAACTATGACAGT+AGG | 0.545503 | 6_2:-3758301 | Msa0905590:CDS |
| AAAAGCAAATTACTCTGCAA+AGG | 0.545852 | 6_2:+3760683 | None:intergenic |
| CACAAGCTCATCAGATCTCA+AGG | 0.546895 | 6_2:+3760053 | None:intergenic |
| GGCTGCCTTATTGGTAAAGG+AGG | 0.555181 | 6_2:-3758682 | Msa0905590:CDS |
| ACAATCGGAGGTCCTGCAGT+TGG | 0.556185 | 6_2:+3759297 | None:intergenic |
| CTGATCAAGTTCAGTAAGCA+TGG | 0.557464 | 6_2:+3756067 | None:intergenic |
| TAGAGAGAGGATTGAAGCGG+CGG | 0.558695 | 6_2:+3761685 | None:intergenic |
| TCAAATAAGGCAGGATTCTG+GGG | 0.561605 | 6_2:-3759091 | Msa0905590:CDS |
| CTATTATAACTGAGATGAGA+AGG | 0.563633 | 6_2:-3758657 | Msa0905590:CDS |
| CTGTTTGGATGGTAAGGGAA+AGG | 0.565776 | 6_2:+3755874 | Msa0905580:CDS |
| CAACAGCTTAGCATTCACTT+GGG | 0.570262 | 6_2:+3760194 | None:intergenic |
| TCATATTCAAGTGGCTATGG+AGG | 0.574440 | 6_2:-3758251 | Msa0905590:CDS |
| TGAACTTGATCAGTCGCCCC+AGG | 0.574673 | 6_2:-3756057 | Msa0905590:intron |
| CTAGAAACATTGTTCTGACT+AGG | 0.575333 | 6_2:+3756099 | None:intergenic |
| GGAAATAAAAGGAGGAATGG+AGG | 0.578539 | 6_2:-3760549 | Msa0905590:CDS |
| GAGCATCTTTGGCAACATCA+AGG | 0.578808 | 6_2:+3758432 | None:intergenic |
| AGGTGATCATGACAGGGATA+GGG | 0.581436 | 6_2:-3760529 | Msa0905590:CDS |
| GAGATCTGATGAGCTTGTGC+AGG | 0.581694 | 6_2:-3760049 | Msa0905590:intron |
| TGTTCTTAACTATGACAGTA+GGG | 0.584516 | 6_2:-3758300 | Msa0905590:CDS |
| ACGCTTGTCACCGTCATCAA+CGG | 0.584883 | 6_2:+3760305 | None:intergenic |
| GCCACCACGGTCTATGTACT+CGG | 0.588324 | 6_2:-3759217 | Msa0905590:CDS |
| TGATGATGATGAAATGGTGC+AGG | 0.592383 | 6_2:-3758578 | Msa0905590:intron |
| CCTAAATTGTGACATTACAA+AGG | 0.593952 | 6_2:-3761743 | Msa0905590:five_prime_UTR |
| TGGTAAGGGAAAGGGAACAA+AGG | 0.594273 | 6_2:+3755883 | Msa0905580:CDS |
| TCGTCGGTAGAAGAGAAAGA+AGG | 0.594453 | 6_2:+3761717 | None:intergenic |
| CTTTCCCTATCACGCCGCCA+AGG | 0.595068 | 6_2:+3759130 | None:intergenic |
| GGCGTGATAGGGAAAGGTGG+AGG | 0.595333 | 6_2:-3759123 | Msa0905590:CDS |
| CCTTCTGTATATCCCAGTGG+TGG | 0.597909 | 6_2:-3759333 | Msa0905590:CDS |
| ACGCCGCCAAGGTTTCCAGT+TGG | 0.598483 | 6_2:+3759141 | None:intergenic |
| CTGCAGGACCTCCGATTGTG+GGG | 0.600727 | 6_2:-3759293 | Msa0905590:CDS |
| TGCTGATGATACCAACAGAC+GGG | 0.600814 | 6_2:+3758711 | None:intergenic |
| ATACTACCAATCTTTCTCCC+CGG | 0.602117 | 6_2:+3760459 | None:intergenic |
| CGCGGACATTCATATTCAAG+TGG | 0.603264 | 6_2:-3758260 | Msa0905590:CDS |
| ACTAAGGCTAAGATTAGGAT+CGG | 0.603797 | 6_2:-3760393 | Msa0905590:CDS |
| CTCGGCTGTTTGGATGGTAA+GGG | 0.603874 | 6_2:+3755869 | Msa0905580:CDS |
| GTTTAAGATTCATGATAGGG+TGG | 0.605100 | 6_2:-3760259 | Msa0905590:CDS |
| CAGTCTGACTATGACGGCGG+AGG | 0.605462 | 6_2:-3760570 | Msa0905590:CDS |
| CTTGGCGGCGTGATAGGGAA+AGG | 0.608891 | 6_2:-3759129 | Msa0905590:CDS |
| CCAAGTGAATGCTAAGCTGT+TGG | 0.609071 | 6_2:-3760193 | Msa0905590:CDS |
| ACACAACCTATCTGATCAGA+CGG | 0.614388 | 6_2:+3760168 | None:intergenic |
| TTGGTGCCGTCTGATCAGAT+AGG | 0.616736 | 6_2:-3760174 | Msa0905590:CDS |
| CAAGCGTGTGTCACCTGCTG+AGG | 0.619017 | 6_2:-3760289 | Msa0905590:CDS |
| TCCGCCGTCATAGTCAGACT+GGG | 0.620527 | 6_2:+3760572 | None:intergenic |
| AAGAAGCTTACAGTAGAGAG+AGG | 0.621099 | 6_2:+3761672 | None:intergenic |
| CCCATGAGTGAACCACCACT+GGG | 0.622023 | 6_2:+3759321 | None:intergenic |
| TTTGAAATTCCAGATTTCTG+GGG | 0.622285 | 6_2:-3759448 | Msa0905590:intron |
| GTAGAACTGGAAGGAATCCA+GGG | 0.623782 | 6_2:+3758354 | None:intergenic |
| CAGTAGAGAGAGGATTGAAG+CGG | 0.625374 | 6_2:+3761682 | None:intergenic |
| CCACCACTGGGATATACAGA+AGG | 0.625832 | 6_2:+3759333 | None:intergenic |
| AGATTTACAGAGTGATCAGG+AGG | 0.626003 | 6_2:-3760229 | Msa0905590:CDS |
| GAATATATGGTAGAACTGGA+AGG | 0.628048 | 6_2:+3758345 | None:intergenic |
| ACACTGGTGACTGGCCACCA+CGG | 0.629129 | 6_2:-3759230 | Msa0905590:CDS |
| AACTTTCTCTCCAACCGTAG+AGG | 0.630582 | 6_2:-3758803 | Msa0905590:CDS |
| GCATCGGGGTTGTAAAAGCA+CGG | 0.631796 | 6_2:+3758777 | None:intergenic |
| AGTAGGGATGTCAAAAGACA+TGG | 0.639502 | 6_2:-3758284 | Msa0905590:CDS |
| AGTAAATGCTGAGTTCGAGA+AGG | 0.640016 | 6_2:+3759369 | None:intergenic |
| TCATAGTCAGACTGGGATCG+AGG | 0.646653 | 6_2:+3760579 | None:intergenic |
| GGAGGAAATAAAAGGAGGAA+TGG | 0.646980 | 6_2:-3760552 | Msa0905590:CDS |
| AACAGCTTAGCATTCACTTG+GGG | 0.647144 | 6_2:+3760195 | None:intergenic |
| AGTGATCAGGAGGAAGAAGG+TGG | 0.649638 | 6_2:-3760219 | Msa0905590:CDS |
| GTGCTGATGATACCAACAGA+CGG | 0.649949 | 6_2:+3758710 | None:intergenic |
| GTTGTGTTCTTGGAAAAGGT+GGG | 0.650534 | 6_2:-3760152 | Msa0905590:CDS |
| GTCAGAACAATGTTTCTAGG+AGG | 0.655960 | 6_2:-3756095 | Msa0905590:CDS |
| GGCGGCGTGATAGGGAAAGG+TGG | 0.656757 | 6_2:-3759126 | Msa0905590:CDS |
| GGAGCCATCCCCACAATCGG+AGG | 0.661378 | 6_2:+3759285 | None:intergenic |
| GGTCTATGTACTCGGCTCCG+AGG | 0.667191 | 6_2:-3759209 | Msa0905590:CDS |
| GAATGGAGGTGATCATGACA+GGG | 0.670403 | 6_2:-3760535 | Msa0905590:CDS |
| TCAGATCTCAAGGCACACGC+AGG | 0.670810 | 6_2:+3760063 | None:intergenic |
| GCGGCGGAAGTAAAAGTCGT+CGG | 0.672757 | 6_2:+3761701 | None:intergenic |
| TCCCAGTCTGACTATGACGG+CGG | 0.676497 | 6_2:-3760573 | Msa0905590:CDS |
| GTTCCTTCTGTATATCCCAG+TGG | 0.681069 | 6_2:-3759336 | Msa0905590:CDS |
| GAGACTAATACCGTTGATGA+CGG | 0.687011 | 6_2:-3760315 | Msa0905590:CDS |
| CGATCCCAGTCTGACTATGA+CGG | 0.688162 | 6_2:-3760576 | Msa0905590:CDS |
| ACAACACGCTCATCGCACCC+CGG | 0.688306 | 6_2:+3760360 | None:intergenic |
| GAATTTACGTAGTGAAACTG+GGG | 0.692457 | 6_2:-3760118 | Msa0905590:CDS |
| ACGGCGGAGGAAATAAAAGG+AGG | 0.710850 | 6_2:-3760557 | Msa0905590:CDS |
| GGATCGGTGAGACTGTGCCG+GGG | 0.718334 | 6_2:-3760377 | Msa0905590:CDS |
| GATGTCAAAAGACATGGACG+CGG | 0.735664 | 6_2:-3758278 | Msa0905590:CDS |
| GCCGAGTACATAGACCGTGG+TGG | 0.741429 | 6_2:+3759216 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATATATAAAAAAT+TGG | + | chr6_2:3756032-3756051 | None:intergenic | 0.0% |
| !! | TTATAAAATATTATTTACCA+AGG | + | chr6_2:3757653-3757672 | None:intergenic | 10.0% |
| !!! | ATAATATTTTATAATGTTAG+CGG | - | chr6_2:3757659-3757678 | Msa0905590:intron | 10.0% |
| !! | ATTGGAAATTGAAAAAATTA+GGG | + | chr6_2:3756074-3756093 | None:intergenic | 15.0% |
| !! | AATTGGAAATTGAAAAAATT+AGG | + | chr6_2:3756075-3756094 | None:intergenic | 15.0% |
| !! | TCAATGGAAAAATTAAAAAT+TGG | + | chr6_2:3756092-3756111 | None:intergenic | 15.0% |
| !!! | AAAATTTGCTTAATTTCTTA+TGG | - | chr6_2:3756153-3756172 | Msa0905590:intron | 15.0% |
| !!! | AAATTTGCTTAATTTCTTAT+GGG | - | chr6_2:3756154-3756173 | Msa0905590:intron | 15.0% |
| !!! | TTTTTGTTGAAATTGTAATT+TGG | - | chr6_2:3756206-3756225 | Msa0905590:intron | 15.0% |
| !!! | ATTTTTTAAATTTTTGGACA+TGG | - | chr6_2:3756250-3756269 | Msa0905590:intron | 15.0% |
| !!! | ATCCTTTTTATTATCTTTTA+AGG | - | chr6_2:3756276-3756295 | Msa0905590:intron | 15.0% |
| !! | AACCTTAAAAGATAATAAAA+AGG | + | chr6_2:3756281-3756300 | None:intergenic | 15.0% |
| !!! | AAAAGTTTTGAATTTGATTA+AGG | - | chr6_2:3756420-3756439 | Msa0905590:intron | 15.0% |
| !! | TGAATATATTATGTATGATT+TGG | - | chr6_2:3756595-3756614 | Msa0905590:intron | 15.0% |
| !! | AAAGAAAGAAAAAAATCTAA+AGG | + | chr6_2:3756699-3756718 | None:intergenic | 15.0% |
| !!! | TTTTAATCTTTTTTGACTTT+AGG | - | chr6_2:3756888-3756907 | Msa0905590:intron | 15.0% |
| !!! | TTTTTTCAAATATATCCATA+AGG | - | chr6_2:3757811-3757830 | Msa0905590:intron | 15.0% |
| !!! | TTTTTCAAATATATCCATAA+GGG | - | chr6_2:3757812-3757831 | Msa0905590:intron | 15.0% |
| !! | TTTCACATATTAAGAAAAAT+AGG | + | chr6_2:3757912-3757931 | None:intergenic | 15.0% |
| !! | TTAATTAAATAGAATAAGGA+TGG | + | chr6_2:3760826-3760845 | None:intergenic | 15.0% |
| !! | TGGTTTAATTAAATAGAATA+AGG | + | chr6_2:3760830-3760849 | None:intergenic | 15.0% |
| !! | ATTCTATTTAATTAAACCAT+TGG | - | chr6_2:3760831-3760850 | Msa0905590:intron | 15.0% |
| !! | TTCTATTTAATTAAACCATT+GGG | - | chr6_2:3760832-3760851 | Msa0905590:intron | 15.0% |
| !! | TAACTTAACACTAAAATCAA+TGG | + | chr6_2:3756108-3756127 | None:intergenic | 20.0% |
| !!! | ATCTTTTAAGGTTTATGAAT+TGG | - | chr6_2:3756288-3756307 | Msa0905590:intron | 20.0% |
| !!! | TCTTTTAAGGTTTATGAATT+GGG | - | chr6_2:3756289-3756308 | Msa0905590:intron | 20.0% |
| !! | CGAATATATTATGTAAGATT+TGG | - | chr6_2:3756839-3756858 | Msa0905590:intron | 20.0% |
| !! | CAAAGAGAAAGAAATAATTA+TGG | - | chr6_2:3757000-3757019 | Msa0905590:intron | 20.0% |
| !!! | ATTGTTTAAGATTCATGATA+GGG | - | chr6_2:3757347-3757366 | Msa0905590:intron | 20.0% |
| !!! | ATTTATTAATTTTGCTTCCT+TGG | - | chr6_2:3757633-3757652 | Msa0905590:intron | 20.0% |
| !!! | AAATCAAACTTTTACATTCA+GGG | + | chr6_2:3757737-3757756 | None:intergenic | 20.0% |
| !!! | TTATAATGAGTTTTCCTTAT+TGG | - | chr6_2:3758137-3758156 | Msa0905590:intron | 20.0% |
| !!! | TTTTTGTTCTATTACAATTG+TGG | - | chr6_2:3758639-3758658 | Msa0905590:CDS | 20.0% |
| !! | TTATATTATAATCTTGCCTT+TGG | + | chr6_2:3759538-3759557 | None:intergenic | 20.0% |
| !!! | AAAAGCTGATTTACTATTTT+TGG | + | chr6_2:3759884-3759903 | None:intergenic | 20.0% |
| !! | TGTTCTTCAAAAATCAAATT+TGG | + | chr6_2:3760227-3760246 | None:intergenic | 20.0% |
| !!! | ATCTGCTTTGATATTTTTTA+AGG | - | chr6_2:3760535-3760554 | Msa0905590:CDS | 20.0% |
| !!! | GATTTGATTTGTACTATTTA+TGG | - | chr6_2:3760937-3760956 | Msa0905590:intron | 20.0% |
| !!! | TTTCAACTTAAATATCCTTT+TGG | - | chr6_2:3761121-3761140 | Msa0905590:intron | 20.0% |
| !!! | TACTTTCTATTTTCATTTGT+GGG | + | chr6_2:3761343-3761362 | None:intergenic | 20.0% |
| !!! | ATACTTTCTATTTTCATTTG+TGG | + | chr6_2:3761344-3761363 | None:intergenic | 20.0% |
| !! | AATGTAACATAACTTGATTA+TGG | + | chr6_2:3761394-3761413 | None:intergenic | 20.0% |
| !! | CAAATACGAATATAAAAAAG+AGG | + | chr6_2:3761479-3761498 | None:intergenic | 20.0% |
| !! | ATGAAAATTATAATCTACCT+GGG | + | chr6_2:3761572-3761591 | None:intergenic | 20.0% |
| !! | TATGAAAATTATAATCTACC+TGG | + | chr6_2:3761573-3761592 | None:intergenic | 20.0% |
| !! | TCAGTCACATTATTATATAA+GGG | - | chr6_2:3761637-3761656 | Msa0905590:intron | 20.0% |
| ! | TTATTGAAGAAATCGATGAA+TGG | + | chr6_2:3756000-3756019 | None:intergenic | 25.0% |
| ! | AGACTAATAATTTAGTGTGA+TGG | - | chr6_2:3756448-3756467 | Msa0905590:intron | 25.0% |
| ! | GACTAATAATTTAGTGTGAT+GGG | - | chr6_2:3756449-3756468 | Msa0905590:intron | 25.0% |
| !! | AGAAAGATTGGTAGTATTAT+TGG | - | chr6_2:3757156-3757175 | Msa0905590:intron | 25.0% |
| !! | CATTGTTTAAGATTCATGAT+AGG | - | chr6_2:3757346-3757365 | Msa0905590:intron | 25.0% |
| !! | GAAATCAAACTTTTACATTC+AGG | + | chr6_2:3757738-3757757 | None:intergenic | 25.0% |
| ! | TAGGTTATTCATACACAAAA+TGG | - | chr6_2:3757870-3757889 | Msa0905590:intron | 25.0% |
| ! | ATATGTGAAAATTGCAAAAG+AGG | - | chr6_2:3757922-3757941 | Msa0905590:intron | 25.0% |
| !!! | TTTTGAAATTCCAGATTTCT+GGG | - | chr6_2:3758160-3758179 | Msa0905590:intron | 25.0% |
| !! | AAAAGAATTTTCAGTTCGAT+TGG | - | chr6_2:3758440-3758459 | Msa0905590:CDS | 25.0% |
| ! | GAGGCATAATAAATCAAATA+AGG | - | chr6_2:3758505-3758524 | Msa0905590:intron | 25.0% |
| ! | CATAATAAATCAAATAAGGC+AGG | - | chr6_2:3758509-3758528 | Msa0905590:intron | 25.0% |
| ! | AATAACCATTTCAACTAAAG+AGG | - | chr6_2:3758584-3758603 | Msa0905590:CDS | 25.0% |
| ! | AAAAATGAAAAATTGTCCAC+GGG | + | chr6_2:3758624-3758643 | None:intergenic | 25.0% |
| ! | CAAAAATGAAAAATTGTCCA+CGG | + | chr6_2:3758625-3758644 | None:intergenic | 25.0% |
| ! | AAATAACATTTCCATTTCAC+TGG | + | chr6_2:3758700-3758719 | None:intergenic | 25.0% |
| !!! | ACTTTTTTTCTCACTTTGTT+TGG | - | chr6_2:3759061-3759080 | Msa0905590:CDS | 25.0% |
| !! | AAAATTTTGTCCTATAATGC+TGG | - | chr6_2:3759115-3759134 | Msa0905590:CDS | 25.0% |
| ! | AATTTGGTTAGATAAAAGCA+AGG | + | chr6_2:3760211-3760230 | None:intergenic | 25.0% |
| ! | GACTATGAAAGTTATTCTTT+GGG | - | chr6_2:3760357-3760376 | Msa0905590:CDS | 25.0% |
| !!! | CTAAGCAGTTATAATTTGTT+AGG | + | chr6_2:3760502-3760521 | None:intergenic | 25.0% |
| ! | AATATCAAAGCAGATATCTA+AGG | + | chr6_2:3760530-3760549 | None:intergenic | 25.0% |
| !!! | GATATTTTTTAAGGTCTGAA+AGG | - | chr6_2:3760544-3760563 | Msa0905590:CDS | 25.0% |
| ! | TAATACATCATGGAAAGTTA+AGG | - | chr6_2:3761159-3761178 | Msa0905590:intron | 25.0% |
| ! | AATACATCATGGAAAGTTAA+GGG | - | chr6_2:3761160-3761179 | Msa0905590:intron | 25.0% |
| ! | ATAACTTGATTATGGAAATC+AGG | + | chr6_2:3761386-3761405 | None:intergenic | 25.0% |
| !! | TTATATTCGTATTTGTTACC+AGG | - | chr6_2:3761484-3761503 | Msa0905590:intron | 25.0% |
| ! | TGAAAATTATAATCTACCTG+GGG | + | chr6_2:3761571-3761590 | None:intergenic | 25.0% |
| ! | CAACTTCCTATGATTTATAT+AGG | - | chr6_2:3761614-3761633 | Msa0905590:intron | 25.0% |
| ! | GTCAGTCACATTATTATATA+AGG | - | chr6_2:3761636-3761655 | Msa0905590:intron | 25.0% |
| CCTTTGTAATGTCACAATTT+AGG | + | chr6_2:3755869-3755888 | Msa0905580:CDS | 30.0% | |
| CCTAAATTGTGACATTACAA+AGG | - | chr6_2:3755866-3755885 | Msa0905590:CDS | 30.0% | |
| ! | TAATAATTTAGTGTGATGGG+TGG | - | chr6_2:3756452-3756471 | Msa0905590:intron | 30.0% |
| ! | TCTTTCAGATTCTCAGTTTT+TGG | - | chr6_2:3756714-3756733 | Msa0905590:intron | 30.0% |
| !! | ACCAAATACTTGCTTTTAGA+AGG | + | chr6_2:3756797-3756816 | None:intergenic | 30.0% |
| AAAAGCAAATTACTCTGCAA+AGG | + | chr6_2:3756929-3756948 | None:intergenic | 30.0% | |
| ! | ACACTAAGAATTTTCTGTGA+TGG | - | chr6_2:3756972-3756991 | Msa0905590:intron | 30.0% |
| ! | CACTAAGAATTTTCTGTGAT+GGG | - | chr6_2:3756973-3756992 | Msa0905590:intron | 30.0% |
| ! | AGATTGGTAGTATTATTGGT+AGG | - | chr6_2:3757160-3757179 | Msa0905590:intron | 30.0% |
| ! | GATTGGTAGTATTATTGGTA+GGG | - | chr6_2:3757161-3757180 | Msa0905590:intron | 30.0% |
| ! | ATTGGTAGTATTATTGGTAG+GGG | - | chr6_2:3757162-3757181 | Msa0905590:intron | 30.0% |
| TGAGATAGTTAAGCAATTGA+GGG | - | chr6_2:3757188-3757207 | Msa0905590:intron | 30.0% | |
| TAGAAACTAAGGCTAAGATT+AGG | - | chr6_2:3757211-3757230 | Msa0905590:intron | 30.0% | |
| AGAATTTACGTAGTGAAACT+GGG | - | chr6_2:3757490-3757509 | Msa0905590:intron | 30.0% | |
| TTCAAAAGGGGCTATATTTA+GGG | + | chr6_2:3757703-3757722 | None:intergenic | 30.0% | |
| TTTCAAAAGGGGCTATATTT+AGG | + | chr6_2:3757704-3757723 | None:intergenic | 30.0% | |
| !! | GACAAATTGCTTTTCAAAAG+GGG | + | chr6_2:3757715-3757734 | None:intergenic | 30.0% |
| !! | GGACAAATTGCTTTTCAAAA+GGG | + | chr6_2:3757716-3757735 | None:intergenic | 30.0% |
| AAATATATCCATAAGGGTCT+TGG | - | chr6_2:3757818-3757837 | Msa0905590:intron | 30.0% | |
| TGCAAAAGAGGCTTATAATA+AGG | - | chr6_2:3757934-3757953 | Msa0905590:intron | 30.0% | |
| GCAAAAGAGGCTTATAATAA+GGG | - | chr6_2:3757935-3757954 | Msa0905590:intron | 30.0% | |
| CAAAAGTAGTAATTGCTATC+TGG | - | chr6_2:3757967-3757986 | Msa0905590:intron | 30.0% | |
| !! | ATTACTACTTTTGTCCCATT+GGG | + | chr6_2:3758020-3758039 | None:intergenic | 30.0% |
| !! | AATTACTACTTTTGTCCCAT+TGG | + | chr6_2:3758021-3758040 | None:intergenic | 30.0% |
| CTGGAATTTCAAAACCAATA+AGG | + | chr6_2:3758154-3758173 | None:intergenic | 30.0% | |
| !!! | GTTTTGAAATTCCAGATTTC+TGG | - | chr6_2:3758159-3758178 | Msa0905590:intron | 30.0% |
| ! | TTTGAAATTCCAGATTTCTG+GGG | - | chr6_2:3758161-3758180 | Msa0905590:intron | 30.0% |
| !! | AAAGTTGATAGTTCTGCAAA+AGG | - | chr6_2:3758549-3758568 | Msa0905590:intron | 30.0% |
| !! | GAAATGGAAATGTTATTTCC+TGG | - | chr6_2:3758702-3758721 | Msa0905590:CDS | 30.0% |
| !!! | TTTCACTTTTTTCACTGCAT+CGG | + | chr6_2:3758851-3758870 | None:intergenic | 30.0% |
| GAAAAAAGTGAAAGAGATTC+TGG | - | chr6_2:3758858-3758877 | Msa0905590:intron | 30.0% | |
| CTATTATAACTGAGATGAGA+AGG | - | chr6_2:3758952-3758971 | Msa0905590:intron | 30.0% | |
| ! | TCATCATCAGAAGCAATTTT+AGG | + | chr6_2:3759020-3759039 | None:intergenic | 30.0% |
| !! | AGTACTTTTTATCACACAGA+AGG | + | chr6_2:3759095-3759114 | None:intergenic | 30.0% |
| TCTAATCAAGAAAGCAGATA+CGG | + | chr6_2:3759147-3759166 | None:intergenic | 30.0% | |
| CTGCTTTCTTGATTAGATTT+CGG | - | chr6_2:3759150-3759169 | Msa0905590:CDS | 30.0% | |
| TGCTTTCTTGATTAGATTTC+GGG | - | chr6_2:3759151-3759170 | Msa0905590:CDS | 30.0% | |
| ATGTTCTTAACTATGACAGT+AGG | - | chr6_2:3759308-3759327 | Msa0905590:CDS | 30.0% | |
| TGTTCTTAACTATGACAGTA+GGG | - | chr6_2:3759309-3759328 | Msa0905590:CDS | 30.0% | |
| ! | TTTTTATACCCAAACGATCT+TGG | + | chr6_2:3759473-3759492 | None:intergenic | 30.0% |
| ATTATAATCTTGCCTTTGGT+GGG | + | chr6_2:3759534-3759553 | None:intergenic | 30.0% | |
| TATTATAATCTTGCCTTTGG+TGG | + | chr6_2:3759535-3759554 | None:intergenic | 30.0% | |
| ! | GCTTATAATGCTTCTTTTAG+AGG | + | chr6_2:3759854-3759873 | None:intergenic | 30.0% |
| ! | TGGGTTAAAAGGTACAAATT+CGG | - | chr6_2:3760030-3760049 | Msa0905590:intron | 30.0% |
| AAACAACAGATGAGAGATAA+TGG | + | chr6_2:3760288-3760307 | None:intergenic | 30.0% | |
| GGACTATGAAAGTTATTCTT+TGG | - | chr6_2:3760356-3760375 | Msa0905590:CDS | 30.0% | |
| ! | ATGAAAGTTATTCTTTGGGA+CGG | - | chr6_2:3760361-3760380 | Msa0905590:CDS | 30.0% |
| AAGAAAAAAGACAAGACTTG+AGG | + | chr6_2:3760413-3760432 | None:intergenic | 30.0% | |
| CATTCATAGAAAGGAAGAAA+TGG | + | chr6_2:3760444-3760463 | None:intergenic | 30.0% | |
| CATCTACAACATTCATAGAA+AGG | + | chr6_2:3760453-3760472 | None:intergenic | 30.0% | |
| !!! | TTTTTAAGGTCTGAAAGGTT+TGG | - | chr6_2:3760549-3760568 | Msa0905590:CDS | 30.0% |
| ATTATCTACCAGATTCTATC+AGG | + | chr6_2:3760592-3760611 | None:intergenic | 30.0% | |
| GATAGAATCTGGTAGATAAT+TGG | - | chr6_2:3760592-3760611 | Msa0905590:CDS | 30.0% | |
| GTTATAATGCTTGGTTGATT+GGG | + | chr6_2:3760782-3760801 | None:intergenic | 30.0% | |
| AGTTATAATGCTTGGTTGAT+TGG | + | chr6_2:3760783-3760802 | None:intergenic | 30.0% | |
| ACATGTTAGAAGTTACTTCA+TGG | - | chr6_2:3760913-3760932 | Msa0905590:intron | 30.0% | |
| GTTAGATTCCATATATTGTG+TGG | - | chr6_2:3761010-3761029 | Msa0905590:intron | 30.0% | |
| TATTATTTGCCACCCATAAA+AGG | - | chr6_2:3761038-3761057 | Msa0905590:intron | 30.0% | |
| !!! | CGTTTGTTTTGTGAAAATCA+AGG | + | chr6_2:3761072-3761091 | None:intergenic | 30.0% |
| ! | ATTTTCACAAAACAAACGAG+AGG | - | chr6_2:3761074-3761093 | Msa0905590:intron | 30.0% |
| GTTGCTAAATAAAGGATAAG+TGG | + | chr6_2:3761598-3761617 | None:intergenic | 30.0% | |
| CATAGGAAGTTGCTAAATAA+AGG | + | chr6_2:3761606-3761625 | None:intergenic | 30.0% | |
| GACTGACCTATATAAATCAT+AGG | + | chr6_2:3761623-3761642 | None:intergenic | 30.0% | |
| !! | AAGAGCATCAGAATTCTAAA+CGG | + | chr6_2:3761700-3761719 | None:intergenic | 30.0% |
| !! | ATGGAATGAAAAGTTGGTGA+TGG | + | chr6_2:3755981-3756000 | None:intergenic | 35.0% |
| CGATGAATGGAATGAAAAGT+TGG | + | chr6_2:3755987-3756006 | None:intergenic | 35.0% | |
| ! | AGTTCGCATATGTTTGTTAC+AGG | + | chr6_2:3756743-3756762 | None:intergenic | 35.0% |
| ! | GCCTTCTAAAAGCAAGTATT+TGG | - | chr6_2:3756793-3756812 | Msa0905590:intron | 35.0% |
| !! | TAAGAATTTTCTGTGATGGG+TGG | - | chr6_2:3756976-3756995 | Msa0905590:intron | 35.0% |
| GGAGCAGTTTGTGATTAATA+AGG | - | chr6_2:3757101-3757120 | Msa0905590:intron | 35.0% | |
| ! | TGTTTTTCGCTATTTGTGTC+CGG | - | chr6_2:3757131-3757150 | Msa0905590:intron | 35.0% |
| GTGAGATAGTTAAGCAATTG+AGG | - | chr6_2:3757187-3757206 | Msa0905590:intron | 35.0% | |
| ACTAAGGCTAAGATTAGGAT+CGG | - | chr6_2:3757216-3757235 | Msa0905590:intron | 35.0% | |
| ! | GTTTAAGATTCATGATAGGG+TGG | - | chr6_2:3757350-3757369 | Msa0905590:intron | 35.0% |
| TGAAGATTTACAGAGTGATC+AGG | - | chr6_2:3757377-3757396 | Msa0905590:intron | 35.0% | |
| ATAGGTTGTGTTCTTGGAAA+AGG | - | chr6_2:3757453-3757472 | Msa0905590:intron | 35.0% | |
| CAGAATTTACGTAGTGAAAC+TGG | - | chr6_2:3757489-3757508 | Msa0905590:intron | 35.0% | |
| GAATTTACGTAGTGAAACTG+GGG | - | chr6_2:3757491-3757510 | Msa0905590:intron | 35.0% | |
| !! | GGGACAAATTGCTTTTCAAA+AGG | + | chr6_2:3757717-3757736 | None:intergenic | 35.0% |
| TAAGCTCATTCATACACAGT+AGG | - | chr6_2:3757851-3757870 | Msa0905590:intron | 35.0% | |
| AAGAGGCTTATAATAAGGGA+TGG | - | chr6_2:3757939-3757958 | Msa0905590:intron | 35.0% | |
| !! | TTACTACTTTTGTCCCATTG+GGG | + | chr6_2:3758019-3758038 | None:intergenic | 35.0% |
| GAAGAAGATATTTCATCCCT+CGG | + | chr6_2:3758420-3758439 | None:intergenic | 35.0% | |
| AATCAAATAAGGCAGGATTC+TGG | - | chr6_2:3758516-3758535 | Msa0905590:intron | 35.0% | |
| ATCAAATAAGGCAGGATTCT+GGG | - | chr6_2:3758517-3758536 | Msa0905590:intron | 35.0% | |
| TGCAGAACTATCAACTTTGA+TGG | + | chr6_2:3758547-3758566 | None:intergenic | 35.0% | |
| GTTCACCTCTTTAGTTGAAA+TGG | + | chr6_2:3758592-3758611 | None:intergenic | 35.0% | |
| CTATTACAATTGTGGTTGTG+AGG | - | chr6_2:3758647-3758666 | Msa0905590:CDS | 35.0% | |
| ACATTTCCATTTCACTGGAA+CGG | + | chr6_2:3758695-3758714 | None:intergenic | 35.0% | |
| ACAAACAAAAATTGCAAGCC+AGG | + | chr6_2:3758723-3758742 | None:intergenic | 35.0% | |
| !!! | TTCACTTTTTTCACTGCATC+GGG | + | chr6_2:3758850-3758869 | None:intergenic | 35.0% |
| TAGATCCTCCTTTACCAATA+AGG | + | chr6_2:3758935-3758954 | None:intergenic | 35.0% | |
| CTTTGACAGTATGCGAATAT+TGG | + | chr6_2:3758988-3759007 | None:intergenic | 35.0% | |
| CAATATTCGCATACTGTCAA+AGG | - | chr6_2:3758986-3759005 | Msa0905590:intron | 35.0% | |
| ! | TGCTTCTGATGATGATGAAA+TGG | - | chr6_2:3759025-3759044 | Msa0905590:intron | 35.0% |
| CTAATCAAGAAAGCAGATAC+GGG | + | chr6_2:3759146-3759165 | None:intergenic | 35.0% | |
| GAATATATGGTAGAACTGGA+AGG | + | chr6_2:3759267-3759286 | None:intergenic | 35.0% | |
| CTGTCATAGTTAAGAACATC+TGG | + | chr6_2:3759307-3759326 | None:intergenic | 35.0% | |
| CATTCATATTCAAGTGGCTA+TGG | - | chr6_2:3759355-3759374 | Msa0905590:CDS | 35.0% | |
| TAAATCGTGAGATCGTAACA+AGG | - | chr6_2:3759498-3759517 | Msa0905590:intron | 35.0% | |
| GAAAGAGATATCTGCTTTGT+AGG | - | chr6_2:3760472-3760491 | Msa0905590:CDS | 35.0% | |
| ACTATGAACCTGATAGAATC+TGG | - | chr6_2:3760581-3760600 | Msa0905590:CDS | 35.0% | |
| AGAATAAACTTCTGCAGAGT+TGG | - | chr6_2:3760659-3760678 | Msa0905590:five_prime_UTR | 35.0% | |
| TTGGTTACAAGGAAATACAG+TGG | - | chr6_2:3760678-3760697 | Msa0905590:five_prime_UTR | 35.0% | |
| TTGAAACTAACACAACCTCT+AGG | - | chr6_2:3760736-3760755 | Msa0905590:intron | 35.0% | |
| CATTCGGTAGTTATAATGCT+TGG | + | chr6_2:3760791-3760810 | None:intergenic | 35.0% | |
| CAAGCATTATAACTACCGAA+TGG | - | chr6_2:3760789-3760808 | Msa0905590:intron | 35.0% | |
| GTTCTAACATGTTTCACACA+GGG | + | chr6_2:3760871-3760890 | None:intergenic | 35.0% | |
| ! | AGTTCTAACATGTTTCACAC+AGG | + | chr6_2:3760872-3760891 | None:intergenic | 35.0% |
| GTGTGAAACATGTTAGAACT+TGG | - | chr6_2:3760872-3760891 | Msa0905590:intron | 35.0% | |
| ATAGTAGGCCACACAATATA+TGG | + | chr6_2:3761021-3761040 | None:intergenic | 35.0% | |
| TATGGGTGGCAAATAATAGT+AGG | + | chr6_2:3761036-3761055 | None:intergenic | 35.0% | |
| ! | AAGGCAATTCCACCTTTTAT+GGG | + | chr6_2:3761053-3761072 | None:intergenic | 35.0% |
| ! | TATCCTTTTGGCAAATCCTT+AGG | - | chr6_2:3761133-3761152 | Msa0905590:intron | 35.0% |
| CCATGATGTATTACAACCTA+AGG | + | chr6_2:3761152-3761171 | None:intergenic | 35.0% | |
| ! | CCTTAGGTTGTAATACATCA+TGG | - | chr6_2:3761149-3761168 | Msa0905590:intron | 35.0% |
| GAAAGTAAGTGAGAACAAGA+TGG | - | chr6_2:3761263-3761282 | Msa0905590:intron | 35.0% | |
| ! | TGAGAACAAGATGGCATTTT+TGG | - | chr6_2:3761272-3761291 | Msa0905590:intron | 35.0% |
| CTAGAAACATTGTTCTGACT+AGG | + | chr6_2:3761513-3761532 | None:intergenic | 35.0% | |
| CTAGTCAGAACAATGTTTCT+AGG | - | chr6_2:3761511-3761530 | Msa0905590:intron | 35.0% | |
| ! | AGAGCATCAGAATTCTAAAC+GGG | + | chr6_2:3761699-3761718 | None:intergenic | 35.0% |
| AAGAAGCTTACAGTAGAGAG+AGG | + | chr6_2:3755940-3755959 | Msa0905580:CDS | 40.0% | |
| GAATTGGGTTCAGAGATTTG+TGG | - | chr6_2:3756304-3756323 | Msa0905590:intron | 40.0% | |
| GGAGGAAATAAAAGGAGGAA+TGG | - | chr6_2:3757057-3757076 | Msa0905590:intron | 40.0% | |
| GGAAATAAAAGGAGGAATGG+AGG | - | chr6_2:3757060-3757079 | Msa0905590:intron | 40.0% | |
| ! | GTTTTTCGCTATTTGTGTCC+GGG | - | chr6_2:3757132-3757151 | Msa0905590:intron | 40.0% |
| ! | TTTTTCGCTATTTGTGTCCG+GGG | - | chr6_2:3757133-3757152 | Msa0905590:intron | 40.0% |
| ATACTACCAATCTTTCTCCC+CGG | + | chr6_2:3757153-3757172 | None:intergenic | 40.0% | |
| GCAATTGAGGGTAGAAACTA+AGG | - | chr6_2:3757200-3757219 | Msa0905590:intron | 40.0% | |
| ! | GAGACTAATACCGTTGATGA+CGG | - | chr6_2:3757294-3757313 | Msa0905590:intron | 40.0% |
| TTAAACAATGCATCCTCAGC+AGG | + | chr6_2:3757336-3757355 | None:intergenic | 40.0% | |
| AGATTTACAGAGTGATCAGG+AGG | - | chr6_2:3757380-3757399 | Msa0905590:intron | 40.0% | |
| AACAGCTTAGCATTCACTTG+GGG | + | chr6_2:3757417-3757436 | None:intergenic | 40.0% | |
| CAACAGCTTAGCATTCACTT+GGG | + | chr6_2:3757418-3757437 | None:intergenic | 40.0% | |
| ACACAACCTATCTGATCAGA+CGG | + | chr6_2:3757444-3757463 | None:intergenic | 40.0% | |
| GATCAGATAGGTTGTGTTCT+TGG | - | chr6_2:3757447-3757466 | Msa0905590:intron | 40.0% | |
| GTTGTGTTCTTGGAAAAGGT+GGG | - | chr6_2:3757457-3757476 | Msa0905590:intron | 40.0% | |
| GGCTCAGATTCGTATTCTTA+AGG | - | chr6_2:3757512-3757531 | Msa0905590:intron | 40.0% | |
| GCTATATTTAGGGATAGAGG+TGG | + | chr6_2:3757693-3757712 | None:intergenic | 40.0% | |
| TTCATCTTCCAAGACCCTTA+TGG | + | chr6_2:3757829-3757848 | None:intergenic | 40.0% | |
| AGGCTTATAATAAGGGATGG+AGG | - | chr6_2:3757942-3757961 | Msa0905590:intron | 40.0% | |
| GGCTTATAATAAGGGATGGA+GGG | - | chr6_2:3757943-3757962 | Msa0905590:intron | 40.0% | |
| AGTAAATGCTGAGTTCGAGA+AGG | + | chr6_2:3758243-3758262 | None:intergenic | 40.0% | |
| TCTCGAACTCAGCATTTACT+TGG | - | chr6_2:3758243-3758262 | Msa0905590:intron | 40.0% | |
| TCACCTTTATATCCCCCATA+AGG | + | chr6_2:3758360-3758379 | None:intergenic | 40.0% | |
| TCAAATAAGGCAGGATTCTG+GGG | - | chr6_2:3758518-3758537 | Msa0905590:intron | 40.0% | |
| AATTTGCCGTTCCAGTGAAA+TGG | - | chr6_2:3758686-3758705 | Msa0905590:CDS | 40.0% | |
| !!! | TCACTTTTTTCACTGCATCG+GGG | + | chr6_2:3758849-3758868 | None:intergenic | 40.0% |
| TTGGTATCATCAGCACGAAT+TGG | - | chr6_2:3758906-3758925 | Msa0905590:intron | 40.0% | |
| ! | ATTGGCTGCCTTATTGGTAA+AGG | - | chr6_2:3758924-3758943 | Msa0905590:intron | 40.0% |
| ! | TGATGATGATGAAATGGTGC+AGG | - | chr6_2:3759031-3759050 | Msa0905590:CDS | 40.0% |
| ATGATGAAATGGTGCAGGTA+AGG | - | chr6_2:3759036-3759055 | Msa0905590:CDS | 40.0% | |
| TGATGAAATGGTGCAGGTAA+GGG | - | chr6_2:3759037-3759056 | Msa0905590:CDS | 40.0% | |
| !! | AACTTGCACAAGAGCATCTT+TGG | + | chr6_2:3759191-3759210 | None:intergenic | 40.0% |
| ! | AGCAAACCTTTTCGATAGAG+AGG | - | chr6_2:3759225-3759244 | Msa0905590:CDS | 40.0% |
| ! | GCAAACCTTTTCGATAGAGA+GGG | - | chr6_2:3759226-3759245 | Msa0905590:CDS | 40.0% |
| GCAGGAATATATGGTAGAAC+TGG | + | chr6_2:3759271-3759290 | None:intergenic | 40.0% | |
| TCTACTGGAGCAGGAATATA+TGG | + | chr6_2:3759280-3759299 | None:intergenic | 40.0% | |
| TATATTCCTGCTCCAGTAGA+TGG | - | chr6_2:3759280-3759299 | Msa0905590:CDS | 40.0% | |
| AGTAGGGATGTCAAAAGACA+TGG | - | chr6_2:3759325-3759344 | Msa0905590:CDS | 40.0% | |
| TCATATTCAAGTGGCTATGG+AGG | - | chr6_2:3759358-3759377 | Msa0905590:CDS | 40.0% | |
| TATGGAGGCTCAAGTGATTT+AGG | - | chr6_2:3759373-3759392 | Msa0905590:CDS | 40.0% | |
| TTCACAGGTACTTCTATCCA+TGG | - | chr6_2:3759426-3759445 | Msa0905590:CDS | 40.0% | |
| !! | GATCTCGATTTTGACAACCA+TGG | + | chr6_2:3759446-3759465 | None:intergenic | 40.0% |
| AGATCTCATCCAAGATCGTT+TGG | - | chr6_2:3759461-3759480 | Msa0905590:intron | 40.0% | |
| GATCTCATCCAAGATCGTTT+GGG | - | chr6_2:3759462-3759481 | Msa0905590:intron | 40.0% | |
| ! | AACGGGTCATATGGGTTAAA+AGG | - | chr6_2:3760019-3760038 | Msa0905590:intron | 40.0% |
| TCCAGCAAGCTACAGATAAA+CGG | + | chr6_2:3760322-3760341 | None:intergenic | 40.0% | |
| AGACAAGACTTGAGGAAGAT+TGG | + | chr6_2:3760405-3760424 | None:intergenic | 40.0% | |
| ! | AAGGTCTGAAAGGTTTGGTT+AGG | - | chr6_2:3760554-3760573 | Msa0905590:CDS | 40.0% |
| ACAGTGGAAATACAAACTGC+TGG | - | chr6_2:3760694-3760713 | Msa0905590:five_prime_UTR | 40.0% | |
| CAGTGGAAATACAAACTGCT+GGG | - | chr6_2:3760695-3760714 | Msa0905590:five_prime_UTR | 40.0% | |
| ! | GAGGTTGTGTTAGTTTCAAG+CGG | + | chr6_2:3760735-3760754 | None:intergenic | 40.0% |
| TATTTGCCACCCATAAAAGG+TGG | - | chr6_2:3761041-3761060 | Msa0905590:intron | 40.0% | |
| ! | CAAGGCAATTCCACCTTTTA+TGG | + | chr6_2:3761054-3761073 | None:intergenic | 40.0% |
| CAACCTAAGGATTTGCCAAA+AGG | + | chr6_2:3761139-3761158 | None:intergenic | 40.0% | |
| GTAGACTCTTTACACAGACA+GGG | + | chr6_2:3761428-3761447 | None:intergenic | 40.0% | |
| AGTAGACTCTTTACACAGAC+AGG | + | chr6_2:3761429-3761448 | None:intergenic | 40.0% | |
| !! | GTCAGAACAATGTTTCTAGG+AGG | - | chr6_2:3761514-3761533 | Msa0905590:intron | 40.0% |
| CTGATCAAGTTCAGTAAGCA+TGG | + | chr6_2:3761545-3761564 | None:intergenic | 40.0% | |
| TGTTTGGATGGTAAGGGAAA+GGG | + | chr6_2:3761737-3761756 | None:intergenic | 40.0% | |
| TCGTCGGTAGAAGAGAAAGA+AGG | + | chr6_2:3755895-3755914 | Msa0905580:CDS | 45.0% | |
| CAGTAGAGAGAGGATTGAAG+CGG | + | chr6_2:3755930-3755949 | Msa0905580:CDS | 45.0% | |
| TTGGGTTCAGAGATTTGTGG+TGG | - | chr6_2:3756307-3756326 | Msa0905590:intron | 45.0% | |
| ATGACGGCGGAGGAAATAAA+AGG | - | chr6_2:3757049-3757068 | Msa0905590:intron | 45.0% | |
| GAATGGAGGTGATCATGACA+GGG | - | chr6_2:3757074-3757093 | Msa0905590:intron | 45.0% | |
| AGGTGATCATGACAGGGATA+GGG | - | chr6_2:3757080-3757099 | Msa0905590:intron | 45.0% | |
| GGTAGTATTATTGGTAGGGG+AGG | - | chr6_2:3757165-3757184 | Msa0905590:intron | 45.0% | |
| CCAACAGCTTAGCATTCACT+TGG | + | chr6_2:3757419-3757438 | None:intergenic | 45.0% | |
| CCAAGTGAATGCTAAGCTGT+TGG | - | chr6_2:3757416-3757435 | Msa0905590:intron | 45.0% | |
| GGTTGTGTTCTTGGAAAAGG+TGG | - | chr6_2:3757456-3757475 | Msa0905590:intron | 45.0% | |
| CACAAGCTCATCAGATCTCA+AGG | + | chr6_2:3757559-3757578 | None:intergenic | 45.0% | |
| GCTTGTGCAGGTAAGTTAGA+TGG | - | chr6_2:3757572-3757591 | Msa0905590:intron | 45.0% | |
| GGGGCTATATTTAGGGATAG+AGG | + | chr6_2:3757696-3757715 | None:intergenic | 45.0% | |
| TGTCCAACAATTGTCCCCAA+TGG | - | chr6_2:3758002-3758021 | Msa0905590:intron | 45.0% | |
| GTCCAACAATTGTCCCCAAT+GGG | - | chr6_2:3758003-3758022 | Msa0905590:intron | 45.0% | |
| GGATGCTGCAGTTGTGAAAA+AGG | - | chr6_2:3758182-3758201 | Msa0905590:intron | 45.0% | |
| GTTCCTTCTGTATATCCCAG+TGG | - | chr6_2:3758273-3758292 | Msa0905590:CDS | 45.0% | |
| CTCCTCTTGTTGGTCCTTAT+GGG | - | chr6_2:3758343-3758362 | Msa0905590:CDS | 45.0% | |
| TCCTCTTGTTGGTCCTTATG+GGG | - | chr6_2:3758344-3758363 | Msa0905590:CDS | 45.0% | |
| GGTCCTTATGGGGGATATAA+AGG | - | chr6_2:3758354-3758373 | Msa0905590:CDS | 45.0% | |
| ATAAAGGTGACACTGGTGAC+TGG | - | chr6_2:3758370-3758389 | Msa0905590:CDS | 45.0% | |
| !! | GTTCGATTGGTTTGTCCAAC+TGG | - | chr6_2:3758453-3758472 | Msa0905590:intron | 45.0% |
| GTTTGTCCAACTGGAAACCT+TGG | - | chr6_2:3758462-3758481 | Msa0905590:intron | 45.0% | |
| GGTGAACTATTAATCACCCG+TGG | - | chr6_2:3758605-3758624 | Msa0905590:CDS | 45.0% | |
| AACTTTCTCTCCAACCGTAG+AGG | - | chr6_2:3758806-3758825 | Msa0905590:CDS | 45.0% | |
| ! | CTCTTTTACTACCCGTCTGT+TGG | - | chr6_2:3758887-3758906 | Msa0905590:intron | 45.0% |
| TGCTGATGATACCAACAGAC+GGG | + | chr6_2:3758901-3758920 | None:intergenic | 45.0% | |
| ! | GTGCTGATGATACCAACAGA+CGG | + | chr6_2:3758902-3758921 | None:intergenic | 45.0% |
| GAGCATCTTTGGCAACATCA+AGG | + | chr6_2:3759180-3759199 | None:intergenic | 45.0% | |
| GTAGAACTGGAAGGAATCCA+GGG | + | chr6_2:3759258-3759277 | None:intergenic | 45.0% | |
| AGAACATCTGGACCATCTAC+TGG | + | chr6_2:3759295-3759314 | None:intergenic | 45.0% | |
| GATGTCAAAAGACATGGACG+CGG | - | chr6_2:3759331-3759350 | Msa0905590:CDS | 45.0% | |
| CGCGGACATTCATATTCAAG+TGG | - | chr6_2:3759349-3759368 | Msa0905590:CDS | 45.0% | |
| TTAGGTCCTGGTGACACTTA+TGG | - | chr6_2:3759391-3759410 | Msa0905590:CDS | 45.0% | |
| TAGCTTCCATAAGTGTCACC+AGG | + | chr6_2:3759400-3759419 | None:intergenic | 45.0% | |
| TGGAAGCTATGCAAGTTCAC+AGG | - | chr6_2:3759411-3759430 | Msa0905590:CDS | 45.0% | |
| CAAAACGACATGCTTTGCAG+CGG | + | chr6_2:3759967-3759986 | None:intergenic | 45.0% | |
| !!! | GCTGCAAAGCATGTCGTTTT+GGG | - | chr6_2:3759966-3759985 | Msa0905590:intron | 45.0% |
| ACAAACACTTCTCTGCGAAC+CGG | - | chr6_2:3759991-3760010 | Msa0905590:intron | 45.0% | |
| GGTGCGAAAATCGTTGAAGA+GGG | + | chr6_2:3760116-3760135 | None:intergenic | 45.0% | |
| ! | TCCGTTTATCTGTAGCTTGC+TGG | - | chr6_2:3760318-3760337 | Msa0905590:CDS | 45.0% |
| !! | GTTTATCTGTAGCTTGCTGG+AGG | - | chr6_2:3760321-3760340 | Msa0905590:CDS | 45.0% |
| TGGGACGGAATAGTACTGTT+TGG | - | chr6_2:3760376-3760395 | Msa0905590:CDS | 45.0% | |
| ! | CTTCTGCAGAGTTGGTTACA+AGG | - | chr6_2:3760667-3760686 | Msa0905590:five_prime_UTR | 45.0% |
| TTGGTTGATTGGGAGAGACT+AGG | + | chr6_2:3760772-3760791 | None:intergenic | 45.0% | |
| ATGGCAATGAGACTGCCATT+CGG | + | chr6_2:3760807-3760826 | None:intergenic | 45.0% | |
| ! | GCAATTCCACCTTTTATGGG+TGG | + | chr6_2:3761050-3761069 | None:intergenic | 45.0% |
| ATTGTTCTGACTAGGCAACC+TGG | + | chr6_2:3761505-3761524 | None:intergenic | 45.0% | |
| CAGAATTCTAAACGGGACAC+TGG | + | chr6_2:3761692-3761711 | None:intergenic | 45.0% | |
| TGGTAAGGGAAAGGGAACAA+AGG | + | chr6_2:3761729-3761748 | None:intergenic | 45.0% | |
| CTGTTTGGATGGTAAGGGAA+AGG | + | chr6_2:3761738-3761757 | None:intergenic | 45.0% | |
| !!! | ATTTTTTTAATTTTTCAATT+TGG | - | chr6_2:3756045-3756064 | Msa0905590:intron | 5.0% |
| !!! | ACTAATATTTTTTAAATTTT+TGG | - | chr6_2:3756244-3756263 | Msa0905590:intron | 5.0% |
| !! | AAATTAATTAAATAGTTAAT+TGG | + | chr6_2:3759682-3759701 | None:intergenic | 5.0% |
| !! | ATTAAATATAAGATTTATTA+AGG | - | chr6_2:3759793-3759812 | Msa0905590:intron | 5.0% |
| TAGAGAGAGGATTGAAGCGG+CGG | + | chr6_2:3755927-3755946 | Msa0905580:CDS | 50.0% | |
| TCATAGTCAGACTGGGATCG+AGG | + | chr6_2:3757033-3757052 | None:intergenic | 50.0% | |
| CGATCCCAGTCTGACTATGA+CGG | - | chr6_2:3757033-3757052 | Msa0905590:intron | 50.0% | |
| ACGGCGGAGGAAATAAAAGG+AGG | - | chr6_2:3757052-3757071 | Msa0905590:intron | 50.0% | |
| GGAATGGAGGTGATCATGAC+AGG | - | chr6_2:3757073-3757092 | Msa0905590:intron | 50.0% | |
| GAGGTGATCATGACAGGGAT+AGG | - | chr6_2:3757079-3757098 | Msa0905590:intron | 50.0% | |
| TTGTGTCCGGGGAGAAAGAT+TGG | - | chr6_2:3757144-3757163 | Msa0905590:intron | 50.0% | |
| ACGCTTGTCACCGTCATCAA+CGG | + | chr6_2:3757307-3757326 | None:intergenic | 50.0% | |
| CAGAGTGATCAGGAGGAAGA+AGG | - | chr6_2:3757387-3757406 | Msa0905590:intron | 50.0% | |
| AGTGATCAGGAGGAAGAAGG+TGG | - | chr6_2:3757390-3757409 | Msa0905590:intron | 50.0% | |
| !! | TTGGTGCCGTCTGATCAGAT+AGG | - | chr6_2:3757435-3757454 | Msa0905590:intron | 50.0% |
| GAGATCTGATGAGCTTGTGC+AGG | - | chr6_2:3757560-3757579 | Msa0905590:intron | 50.0% | |
| GTCCCATTGGGGACAATTGT+TGG | + | chr6_2:3758008-3758027 | None:intergenic | 50.0% | |
| CCACCACTGGGATATACAGA+AGG | + | chr6_2:3758279-3758298 | None:intergenic | 50.0% | |
| CCTTCTGTATATCCCAGTGG+TGG | - | chr6_2:3758276-3758295 | Msa0905590:CDS | 50.0% | |
| GCTCCTCTTGTTGGTCCTTA+TGG | - | chr6_2:3758342-3758361 | Msa0905590:CDS | 50.0% | |
| CCTCTTGTTGGTCCTTATGG+GGG | - | chr6_2:3758345-3758364 | Msa0905590:CDS | 50.0% | |
| GGGGGATATAAAGGTGACAC+TGG | - | chr6_2:3758363-3758382 | Msa0905590:CDS | 50.0% | |
| TGTCCAACTGGAAACCTTGG+CGG | - | chr6_2:3758465-3758484 | Msa0905590:intron | 50.0% | |
| ! | TAAAAGCACGGCTGCCTCTA+CGG | + | chr6_2:3758823-3758842 | None:intergenic | 50.0% |
| GCATCGGGGTTGTAAAAGCA+CGG | + | chr6_2:3758835-3758854 | None:intergenic | 50.0% | |
| GCACGAATTGGCTGCCTTAT+TGG | - | chr6_2:3758918-3758937 | Msa0905590:intron | 50.0% | |
| ! | GGCTGCCTTATTGGTAAAGG+AGG | - | chr6_2:3758927-3758946 | Msa0905590:intron | 50.0% |
| ACGGGCAAAGCCAGCATTAT+AGG | + | chr6_2:3759128-3759147 | None:intergenic | 50.0% | |
| CAGCACCCTCTCTATCGAAA+AGG | + | chr6_2:3759234-3759253 | None:intergenic | 50.0% | |
| GGTAGAACTGGAAGGAATCC+AGG | + | chr6_2:3759259-3759278 | None:intergenic | 50.0% | |
| GGCTCAAGTGATTTAGGTCC+TGG | - | chr6_2:3759379-3759398 | Msa0905590:CDS | 50.0% | |
| GGATCGTAAGATCCCACCAA+AGG | - | chr6_2:3759519-3759538 | Msa0905590:intron | 50.0% | |
| GCTTTGCAGCGGAAGAGAAA+TGG | + | chr6_2:3759956-3759975 | None:intergenic | 50.0% | |
| !! | CGCTGCAAAGCATGTCGTTT+TGG | - | chr6_2:3759965-3759984 | Msa0905590:intron | 50.0% |
| CAAACACTTCTCTGCGAACC+GGG | - | chr6_2:3759992-3760011 | Msa0905590:intron | 50.0% | |
| !! | CCATATGACCCGTTTTGACC+CGG | + | chr6_2:3760013-3760032 | None:intergenic | 50.0% |
| CGGGTCAAAACGGGTCATAT+GGG | - | chr6_2:3760011-3760030 | Msa0905590:intron | 50.0% | |
| AGAGGTAGATCGCAAGATCG+TGG | + | chr6_2:3760076-3760095 | None:intergenic | 50.0% | |
| GCGAAAATCGTTGAAGAGGG+CGG | + | chr6_2:3760113-3760132 | None:intergenic | 50.0% | |
| CGGTGCGAAAATCGTTGAAG+AGG | + | chr6_2:3760117-3760136 | None:intergenic | 50.0% | |
| CTAGGCTCGCTAATTCCTAG+AGG | + | chr6_2:3760754-3760773 | None:intergenic | 50.0% | |
| ACACAGACAGGGAAGAGACT+TGG | + | chr6_2:3761417-3761436 | None:intergenic | 50.0% | |
| TTCTAAACGGGACACTGGTC+AGG | + | chr6_2:3761687-3761706 | None:intergenic | 50.0% | |
| CTCGGCTGTTTGGATGGTAA+GGG | + | chr6_2:3761743-3761762 | None:intergenic | 50.0% | |
| TCTCGGCTGTTTGGATGGTA+AGG | + | chr6_2:3761744-3761763 | None:intergenic | 50.0% | |
| ACACATCTCGGCTGTTTGGA+TGG | + | chr6_2:3761749-3761768 | None:intergenic | 50.0% | |
| GCGGCGGAAGTAAAAGTCGT+CGG | + | chr6_2:3755911-3755930 | Msa0905580:CDS | 55.0% | |
| TCCCAGTCTGACTATGACGG+CGG | - | chr6_2:3757036-3757055 | Msa0905590:intron | 55.0% | |
| TCCGCCGTCATAGTCAGACT+GGG | + | chr6_2:3757040-3757059 | None:intergenic | 55.0% | |
| TAGGATCGGTGAGACTGTGC+CGG | - | chr6_2:3757230-3757249 | Msa0905590:intron | 55.0% | |
| TCAGATCTCAAGGCACACGC+AGG | + | chr6_2:3757549-3757568 | None:intergenic | 55.0% | |
| CTGCAGCATCCCCAGAAATC+TGG | + | chr6_2:3758173-3758192 | None:intergenic | 55.0% | |
| TCCCAGTGGTGGTTCACTCA+TGG | - | chr6_2:3758287-3758306 | Msa0905590:CDS | 55.0% | |
| CCCATGAGTGAACCACCACT+GGG | + | chr6_2:3758291-3758310 | None:intergenic | 55.0% | |
| CCCAGTGGTGGTTCACTCAT+GGG | - | chr6_2:3758288-3758307 | Msa0905590:CDS | 55.0% | |
| ACCCATGAGTGAACCACCAC+TGG | + | chr6_2:3758292-3758311 | None:intergenic | 55.0% | |
| TCACTCATGGGTCCAACTGC+AGG | - | chr6_2:3758300-3758319 | Msa0905590:CDS | 55.0% | |
| ACAATCGGAGGTCCTGCAGT+TGG | + | chr6_2:3758315-3758334 | None:intergenic | 55.0% | |
| AACTGCAGGACCTCCGATTG+TGG | - | chr6_2:3758314-3758333 | Msa0905590:CDS | 55.0% | |
| ACTGCAGGACCTCCGATTGT+GGG | - | chr6_2:3758315-3758334 | Msa0905590:CDS | 55.0% | |
| AGAGGAGCCATCCCCACAAT+CGG | + | chr6_2:3758330-3758349 | None:intergenic | 55.0% | |
| CCCCCATAAGGACCAACAAG+AGG | + | chr6_2:3758348-3758367 | None:intergenic | 55.0% | |
| GCCACCACGGTCTATGTACT+CGG | - | chr6_2:3758392-3758411 | Msa0905590:CDS | 55.0% | |
| GTCTATGTACTCGGCTCCGA+GGG | - | chr6_2:3758401-3758420 | Msa0905590:CDS | 55.0% | |
| GAAACCTTGGCGGCGTGATA+GGG | - | chr6_2:3758475-3758494 | Msa0905590:intron | 55.0% | |
| TCTGGACCATCTACTGGAGC+AGG | + | chr6_2:3759289-3759308 | None:intergenic | 55.0% | |
| CTCTGCGAACCGGGTCAAAA+CGG | - | chr6_2:3760001-3760020 | Msa0905590:intron | 55.0% | |
| TCTGCGAACCGGGTCAAAAC+GGG | - | chr6_2:3760002-3760021 | Msa0905590:intron | 55.0% | |
| CCGGGTCAAAACGGGTCATA+TGG | - | chr6_2:3760010-3760029 | Msa0905590:intron | 55.0% | |
| ! | CAACGATTTTCGCACCGCGT+CGG | - | chr6_2:3760120-3760139 | Msa0905590:CDS | 55.0% |
| TTGCTGGAGGCAGTGGCTAT+GGG | - | chr6_2:3760334-3760353 | Msa0905590:CDS | 55.0% | |
| TGAACTTGATCAGTCGCCCC+AGG | - | chr6_2:3761552-3761571 | Msa0905590:intron | 55.0% | |
| CTCCGCCGTCATAGTCAGAC+TGG | + | chr6_2:3757041-3757060 | None:intergenic | 60.0% | |
| CAGTCTGACTATGACGGCGG+AGG | - | chr6_2:3757039-3757058 | Msa0905590:intron | 60.0% | |
| AGGATCGGTGAGACTGTGCC+GGG | - | chr6_2:3757231-3757250 | Msa0905590:intron | 60.0% | |
| ACAACACGCTCATCGCACCC+CGG | + | chr6_2:3757252-3757271 | None:intergenic | 60.0% | |
| CAAGCGTGTGTCACCTGCTG+AGG | - | chr6_2:3757320-3757339 | Msa0905590:intron | 60.0% | |
| CTGCAGGACCTCCGATTGTG+GGG | - | chr6_2:3758316-3758335 | Msa0905590:CDS | 60.0% | |
| AGGACCTCCGATTGTGGGGA+TGG | - | chr6_2:3758320-3758339 | Msa0905590:CDS | 60.0% | |
| GTGGGGATGGCTCCTCTTGT+TGG | - | chr6_2:3758333-3758352 | Msa0905590:CDS | 60.0% | |
| ! | ACACTGGTGACTGGCCACCA+CGG | - | chr6_2:3758379-3758398 | Msa0905590:CDS | 60.0% |
| GCCGAGTACATAGACCGTGG+TGG | + | chr6_2:3758396-3758415 | None:intergenic | 60.0% | |
| GGAGCCGAGTACATAGACCG+TGG | + | chr6_2:3758399-3758418 | None:intergenic | 60.0% | |
| GGTCTATGTACTCGGCTCCG+AGG | - | chr6_2:3758400-3758419 | Msa0905590:CDS | 60.0% | |
| ACGCCGCCAAGGTTTCCAGT+TGG | + | chr6_2:3758471-3758490 | None:intergenic | 60.0% | |
| GGAAACCTTGGCGGCGTGAT+AGG | - | chr6_2:3758474-3758493 | Msa0905590:intron | 60.0% | |
| CTTTCCCTATCACGCCGCCA+AGG | + | chr6_2:3758482-3758501 | None:intergenic | 60.0% | |
| CTTGGCGGCGTGATAGGGAA+AGG | - | chr6_2:3758480-3758499 | Msa0905590:intron | 60.0% | |
| GGCGTGATAGGGAAAGGTGG+AGG | - | chr6_2:3758486-3758505 | Msa0905590:intron | 60.0% | |
| !! | GATAGAGAGGGTGCTGTCCC+TGG | - | chr6_2:3759238-3759257 | Msa0905590:CDS | 60.0% |
| AATCGTTGAAGAGGGCGGCG+CGG | + | chr6_2:3760108-3760127 | None:intergenic | 60.0% | |
| !! | ATTTTCGCACCGCGTCGGCA+CGG | - | chr6_2:3760125-3760144 | Msa0905590:CDS | 60.0% |
| !! | CTGTAGCTTGCTGGAGGCAG+TGG | - | chr6_2:3760327-3760346 | Msa0905590:CDS | 60.0% |
| CTTGCTGGAGGCAGTGGCTA+TGG | - | chr6_2:3760333-3760352 | Msa0905590:CDS | 60.0% | |
| TGCTGGAGGCAGTGGCTATG+GGG | - | chr6_2:3760335-3760354 | Msa0905590:CDS | 60.0% | |
| GGATCGGTGAGACTGTGCCG+GGG | - | chr6_2:3757232-3757251 | Msa0905590:intron | 65.0% | |
| GGAGCCATCCCCACAATCGG+AGG | + | chr6_2:3758327-3758346 | None:intergenic | 65.0% | |
| GGCGGCGTGATAGGGAAAGG+TGG | - | chr6_2:3758483-3758502 | Msa0905590:intron | 65.0% | |
| AGCACGGCTGCCTCTACGGT+TGG | + | chr6_2:3758819-3758838 | None:intergenic | 65.0% | |
| TGCGATCTACCTCTGCGCGC+CGG | - | chr6_2:3760082-3760101 | Msa0905590:CDS | 65.0% | |
| !! | CACCGCGTCGGCACGGTTTT+GGG | - | chr6_2:3760132-3760151 | Msa0905590:CDS | 65.0% |
| ! | CTCCCAAAACCGTGCCGACG+CGG | + | chr6_2:3760137-3760156 | None:intergenic | 65.0% |
| !! | GCACCGCGTCGGCACGGTTT+TGG | - | chr6_2:3760131-3760150 | Msa0905590:CDS | 70.0% |
| GTTGAAGAGGGCGGCGCGGC+CGG | + | chr6_2:3760104-3760123 | None:intergenic | 75.0% | |
| ! | GCGGCGCGGCCGGCGCGCAG+AGG | + | chr6_2:3760094-3760113 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 3755861 | 3761770 | 3755861 | ID=Msa0905590;Name=Msa0905590 |
| chr6_2 | mRNA | 3755861 | 3761770 | 3755861 | ID=Msa0905590-mRNA-1;Parent=Msa0905590;Name=Msa0905590-mRNA-1;_AED=0.27;_eAED=0.27;_QI=169|0.66|0.71|1|0.83|0.71|7|0|544 |
| chr6_2 | exon | 3755861 | 3755926 | 3755861 | ID=Msa0905590-mRNA-1:exon:1157;Parent=Msa0905590-mRNA-1 |
| chr6_2 | exon | 3756058 | 3756125 | 3756058 | ID=Msa0905590-mRNA-1:exon:1156;Parent=Msa0905590-mRNA-1 |
| chr6_2 | exon | 3758246 | 3758465 | 3758246 | ID=Msa0905590-mRNA-1:exon:1155;Parent=Msa0905590-mRNA-1 |
| chr6_2 | exon | 3758579 | 3758836 | 3758579 | ID=Msa0905590-mRNA-1:exon:1154;Parent=Msa0905590-mRNA-1 |
| chr6_2 | exon | 3759026 | 3759457 | 3759026 | ID=Msa0905590-mRNA-1:exon:1153;Parent=Msa0905590-mRNA-1 |
| chr6_2 | exon | 3760050 | 3760721 | 3760050 | ID=Msa0905590-mRNA-1:exon:1152;Parent=Msa0905590-mRNA-1 |
| chr6_2 | exon | 3761683 | 3761770 | 3761683 | ID=Msa0905590-mRNA-1:exon:1151;Parent=Msa0905590-mRNA-1 |
| chr6_2 | five_prime_UTR | 3761683 | 3761770 | 3761683 | ID=Msa0905590-mRNA-1:five_prime_utr;Parent=Msa0905590-mRNA-1 |
| chr6_2 | five_prime_UTR | 3760641 | 3760721 | 3760641 | ID=Msa0905590-mRNA-1:five_prime_utr;Parent=Msa0905590-mRNA-1 |
| chr6_2 | CDS | 3760050 | 3760640 | 3760050 | ID=Msa0905590-mRNA-1:cds;Parent=Msa0905590-mRNA-1 |
| chr6_2 | CDS | 3759026 | 3759457 | 3759026 | ID=Msa0905590-mRNA-1:cds;Parent=Msa0905590-mRNA-1 |
| chr6_2 | CDS | 3758579 | 3758836 | 3758579 | ID=Msa0905590-mRNA-1:cds;Parent=Msa0905590-mRNA-1 |
| chr6_2 | CDS | 3758246 | 3758465 | 3758246 | ID=Msa0905590-mRNA-1:cds;Parent=Msa0905590-mRNA-1 |
| chr6_2 | CDS | 3756058 | 3756125 | 3756058 | ID=Msa0905590-mRNA-1:cds;Parent=Msa0905590-mRNA-1 |
| chr6_2 | CDS | 3755861 | 3755926 | 3755861 | ID=Msa0905590-mRNA-1:cds;Parent=Msa0905590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
