Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137540 | XP_039685959.1 | 99.357 | 622 | 4 | 0 | 41 | 662 | 1 | 622 | 0.0 | 1288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137540 | sp|P52780|SYQ_LUPLU | 88.604 | 623 | 69 | 2 | 41 | 662 | 1 | 622 | 0.0 | 1150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137540 | G7ICA2 | 99.357 | 622 | 4 | 0 | 41 | 662 | 1 | 622 | 0.0 | 1288 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0137540 | 0.804005 | 2.658994e-49 | -8.615850e-47 |
| Msa0047640 | Msa0137540 | 0.810372 | 1.190864e-50 | -8.615850e-47 |
| Msa0052870 | Msa0137540 | 0.817547 | 3.117096e-52 | -8.615850e-47 |
| Msa0054530 | Msa0137540 | 0.811180 | 7.962611e-51 | -8.615850e-47 |
| Msa0064920 | Msa0137540 | 0.809978 | 1.448236e-50 | -8.615850e-47 |
| Msa0080250 | Msa0137540 | 0.810233 | 1.276499e-50 | -8.615850e-47 |
| Msa0089980 | Msa0137540 | 0.801337 | 9.443033e-49 | -8.615850e-47 |
| Msa0091780 | Msa0137540 | 0.805598 | 1.235742e-49 | -8.615850e-47 |
| Msa0092940 | Msa0137540 | 0.804954 | 1.685941e-49 | -8.615850e-47 |
| Msa0116270 | Msa0137540 | 0.818536 | 1.862220e-52 | -8.615850e-47 |
| Msa0133820 | Msa0137540 | 0.807539 | 4.811975e-50 | -8.615850e-47 |
| Msa0137540 | Msa0167400 | 0.802015 | 6.856476e-49 | -8.615850e-47 |
| Msa0137540 | Msa0194860 | 0.817877 | 2.624718e-52 | -8.615850e-47 |
| Msa0137540 | Msa0194890 | 0.801080 | 1.065814e-48 | -8.615850e-47 |
| Msa0137540 | Msa0230370 | 0.806778 | 6.974495e-50 | -8.615850e-47 |
| Msa0137540 | Msa0240650 | 0.801748 | 7.779338e-49 | -8.615850e-47 |
| Msa0137540 | Msa0268110 | 0.802435 | 5.617319e-49 | -8.615850e-47 |
| Msa0137540 | Msa0302890 | 0.812525 | 4.058164e-51 | -8.615850e-47 |
| Msa0137540 | Msa0304100 | 0.831567 | 1.551934e-55 | -8.615850e-47 |
| Msa0137540 | Msa0305330 | 0.808636 | 2.809176e-50 | -8.615850e-47 |
| Msa0137540 | Msa0307570 | 0.818050 | 2.399368e-52 | -8.615850e-47 |
| Msa0137540 | Msa0363400 | 0.812375 | 4.376185e-51 | -8.615850e-47 |
| Msa0137540 | Msa0379610 | 0.809173 | 2.156297e-50 | -8.615850e-47 |
| Msa0137540 | Msa0387950 | 0.804874 | 1.752146e-49 | -8.615850e-47 |
| Msa0137540 | Msa0423840 | 0.824850 | 6.455601e-54 | -8.615850e-47 |
| Msa0137540 | Msa0510290 | 0.804020 | 2.639823e-49 | -8.615850e-47 |
| Msa0137540 | Msa0511150 | 0.842285 | 2.839759e-58 | -8.615850e-47 |
| Msa0137540 | Msa0523900 | 0.801557 | 8.510467e-49 | -8.615850e-47 |
| Msa0137540 | Msa0547680 | 0.805332 | 1.404917e-49 | -8.615850e-47 |
| Msa0137540 | Msa0615060 | 0.810160 | 1.323637e-50 | -8.615850e-47 |
| Msa0137540 | Msa0626270 | 0.835196 | 1.931265e-56 | -8.615850e-47 |
| Msa0137540 | Msa0646400 | 0.829971 | 3.818891e-55 | -8.615850e-47 |
| Msa0137540 | Msa0687450 | 0.818306 | 2.100166e-52 | -8.615850e-47 |
| Msa0137540 | Msa0689760 | 0.840684 | 7.498263e-58 | -8.615850e-47 |
| Msa0137540 | Msa0691340 | 0.817743 | 2.815157e-52 | -8.615850e-47 |
| Msa0137540 | Msa0698100 | 0.804915 | 1.717476e-49 | -8.615850e-47 |
| Msa0137540 | Msa0716860 | 0.834180 | 3.479117e-56 | -8.615850e-47 |
| Msa0137540 | Msa0749400 | 0.835924 | 1.264187e-56 | -8.615850e-47 |
| Msa0137540 | Msa0751260 | 0.800823 | 1.202604e-48 | -8.615850e-47 |
| Msa0137540 | Msa0760770 | 0.838221 | 3.270732e-57 | -8.615850e-47 |
| Msa0137540 | Msa0830290 | 0.822384 | 2.438441e-53 | -8.615850e-47 |
| Msa0137540 | Msa0937430 | 0.808224 | 3.440607e-50 | -8.615850e-47 |
| Msa0137540 | Msa0969330 | 0.849776 | 2.602744e-60 | -8.615850e-47 |
| Msa0137540 | Msa0996020 | 0.822037 | 2.934001e-53 | -8.615850e-47 |
| Msa0137540 | Msa1020940 | 0.800051 | 1.727623e-48 | -8.615850e-47 |
| Msa0137540 | Msa1067140 | 0.828011 | 1.139381e-54 | -8.615850e-47 |
| Msa0137540 | Msa1072600 | 0.806996 | 6.271421e-50 | -8.615850e-47 |
| Msa0137540 | Msa1095790 | 0.881747 | 1.855954e-70 | -8.615850e-47 |
| Msa0137540 | Msa1098890 | 0.800233 | 1.586285e-48 | -8.615850e-47 |
| Msa0137540 | Msa1127540 | 0.801885 | 7.290024e-49 | -8.615850e-47 |
| Msa0137540 | Msa1217670 | 0.844363 | 7.921185e-59 | -8.615850e-47 |
| Msa0137540 | Msa1254620 | 0.802716 | 4.915999e-49 | -8.615850e-47 |
| Msa0137540 | Msa1267040 | 0.810085 | 1.373353e-50 | -8.615850e-47 |
| Msa0137540 | Msa1267170 | 0.801535 | 8.602028e-49 | -8.615850e-47 |
| Msa0137540 | Msa1268680 | 0.820208 | 7.743285e-53 | -8.615850e-47 |
| Msa0137540 | Msa1282500 | 0.831619 | 1.506051e-55 | -8.615850e-47 |
| Msa0137540 | Msa1342270 | 0.806118 | 9.606310e-50 | -8.615850e-47 |
| Msa0137540 | Msa1354200 | 0.809563 | 1.779169e-50 | -8.615850e-47 |
| Msa0137540 | Msa1361440 | 0.811706 | 6.121663e-51 | -8.615850e-47 |
| Msa0137540 | Msa1372790 | 0.847279 | 1.278672e-59 | -8.615850e-47 |
| Msa0137540 | Msa1377810 | 0.831821 | 1.343140e-55 | -8.615850e-47 |
| Msa0137540 | Msa1393820 | 0.821967 | 3.046496e-53 | -8.615850e-47 |
| Msa0137540 | Msa1420250 | 0.839380 | 1.640260e-57 | -8.615850e-47 |
| Msa0137540 | Msa1426910 | 0.812443 | 4.229008e-51 | -8.615850e-47 |
| Msa0137540 | Msa1453360 | 0.800476 | 1.416028e-48 | -8.615850e-47 |
| Msa0137540 | Msa1463010 | 0.804374 | 2.227292e-49 | -8.615850e-47 |
| Msa0137540 | Msa1464370 | 0.818530 | 1.868352e-52 | -8.615850e-47 |
| Msa0137540 | Msa1467000 | 0.809123 | 2.210701e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137540 | MtrunA17_Chr1g0209631 | 99.357 | 622 | 4 | 0 | 41 | 662 | 1 | 622 | 0.0 | 1288 |
| Msa0137540 | MtrunA17_Chr1g0193431 | 37.846 | 325 | 201 | 1 | 309 | 633 | 225 | 548 | 1.23e-64 | 228 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137540 | AT1G25350.1 | 77.524 | 614 | 136 | 1 | 51 | 662 | 9 | 622 | 0.0 | 1011 |
| Msa0137540 | AT1G25350.2 | 75.606 | 619 | 144 | 2 | 51 | 662 | 9 | 627 | 0.0 | 985 |
| Msa0137540 | AT5G26710.1 | 39.385 | 325 | 196 | 1 | 309 | 633 | 212 | 535 | 1.08e-67 | 236 |
Find 156 sgRNAs with CRISPR-Local
Find 696 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGCGATGTTTATTGATTT+TGG | 0.078301 | 1_3:+69999066 | Msa0137540:intron |
| AGATTCAATGATTCTGAAAT+TGG | 0.239159 | 1_3:-70001032 | None:intergenic |
| TGAAGTATTTGAGGAGAATA+AGG | 0.245021 | 1_3:+69997793 | Msa0137540:CDS |
| CCTTATTGCATATCGAATTA+AGG | 0.252842 | 1_3:+70001148 | Msa0137540:CDS |
| TATAATTTACCGTGTAAATA+AGG | 0.262860 | 1_3:-69996465 | None:intergenic |
| AAGAAACAAGTGAGGAATAA+AGG | 0.276112 | 1_3:-69995987 | None:intergenic |
| CGGCTAAATCATACAATTCT+TGG | 0.286989 | 1_3:-70000525 | None:intergenic |
| CGACTCCATTGGGGTATAAA+AGG | 0.287642 | 1_3:-70005839 | None:intergenic |
| CCTAATGGATATTTGCATAT+TGG | 0.298235 | 1_3:+69998943 | Msa0137540:CDS |
| CAACATGTTTCCCACTGATT+TGG | 0.319065 | 1_3:-70005965 | None:intergenic |
| AGAATAGTACCATCGCTAAA+AGG | 0.349411 | 1_3:-69998838 | None:intergenic |
| CCTTAATTCGATATGCAATA+AGG | 0.350425 | 1_3:-70001148 | None:intergenic |
| CTGAGGAGATAAAGGAGTAT+AGG | 0.353345 | 1_3:+70000976 | Msa0137540:CDS |
| CGGTTTCCTCCCGAGCCTAA+TGG | 0.353730 | 1_3:+69998928 | Msa0137540:CDS |
| TGAGGAGATAAAGGAGTATA+GGG | 0.362415 | 1_3:+70000977 | Msa0137540:CDS |
| CTGTGACGTTGCGGCGTGAA+AGG | 0.373640 | 1_3:-69996046 | None:intergenic |
| GGATCATCAGCTTGGGCATC+AGG | 0.376841 | 1_3:-70005391 | None:intergenic |
| TTTCCCTCAACGACTCCATT+GGG | 0.382967 | 1_3:-70005849 | None:intergenic |
| CGCGCCGTGCTTCATACTAT+TGG | 0.385788 | 1_3:+70001970 | Msa0137540:CDS |
| GTATTTACCAACCTTATGTA+TGG | 0.387845 | 1_3:+70002009 | Msa0137540:CDS |
| TATTGGTTGTTGCATGCATT+AGG | 0.389406 | 1_3:+70001987 | Msa0137540:CDS |
| TGATGACATTAGCTGGTTTA+CGG | 0.390710 | 1_3:+70002229 | Msa0137540:CDS |
| TTGTGCTTATGTTGATCATC+AGG | 0.392938 | 1_3:+70000567 | Msa0137540:CDS |
| CTTCCCTAACATGATATTCA+AGG | 0.397704 | 1_3:-70005184 | None:intergenic |
| AATGGATTGAGATCTTCTTC+TGG | 0.398450 | 1_3:-69998360 | None:intergenic |
| TGCAAAATTATATGAGCTAC+TGG | 0.410648 | 1_3:+69998144 | Msa0137540:CDS |
| AGCTGTTAATGAAGTATTTG+AGG | 0.411819 | 1_3:+69997784 | Msa0137540:CDS |
| AATAAGGTTTCCAACAGTTC+GGG | 0.413362 | 1_3:-69996449 | None:intergenic |
| AAATAAGGTTTCCAACAGTT+CGG | 0.414367 | 1_3:-69996450 | None:intergenic |
| TTACTAGTTGGTGAGTTACT+TGG | 0.414784 | 1_3:+69997964 | Msa0137540:intron |
| ACCGCATCGACCAACATTGC+TGG | 0.416551 | 1_3:+69996993 | Msa0137540:CDS |
| CTTTCCCTCAACGACTCCAT+TGG | 0.417745 | 1_3:-70005850 | None:intergenic |
| ATTTCTTGCCAATACGGGTT+CGG | 0.420438 | 1_3:+69997268 | Msa0137540:CDS |
| ACTATCATTTCTTGCCAATA+CGG | 0.420572 | 1_3:+69997262 | Msa0137540:CDS |
| GTCGCCTTGAATATCATGTT+AGG | 0.427051 | 1_3:+70005180 | Msa0137540:CDS |
| GTAGACACCTGAGGAGATAA+AGG | 0.427662 | 1_3:+70000968 | Msa0137540:intron |
| CTATACTCCTTTATCTCCTC+AGG | 0.428879 | 1_3:-70000975 | None:intergenic |
| CGATGCGGTAAGGCATTTCC+AGG | 0.432226 | 1_3:-69996979 | None:intergenic |
| GACAAGCATTTGAAAGCAAC+AGG | 0.432915 | 1_3:+69998889 | Msa0137540:CDS |
| CTTGAATATTCCCATACATA+AGG | 0.434106 | 1_3:-70002020 | None:intergenic |
| ACGTGCGAAAGAGGCTTCCA+TGG | 0.435748 | 1_3:+69997989 | Msa0137540:CDS |
| CTTCAAATTTATTCACATCC+AGG | 0.441234 | 1_3:-69997295 | None:intergenic |
| CCAATATGCAAATATCCATT+AGG | 0.445438 | 1_3:-69998943 | None:intergenic |
| AAACTCACCTCTACTTTAGC+AGG | 0.448864 | 1_3:-69998220 | None:intergenic |
| CTTATGTATGGGAATATTCA+AGG | 0.450934 | 1_3:+70002021 | Msa0137540:CDS |
| TCCATTGAAGCTTAATCGCC+TGG | 0.452017 | 1_3:+70002167 | Msa0137540:intron |
| TTTGAAGAAGCGTGTGGAGT+TGG | 0.453075 | 1_3:+69997311 | Msa0137540:CDS |
| GTGGATAACGGCGGTGAGAT+TGG | 0.455593 | 1_3:-69996401 | None:intergenic |
| CAGTGAGCATAATCATAACT+TGG | 0.456666 | 1_3:-70001287 | None:intergenic |
| GAACTACGCTATCGAACAAA+TGG | 0.464729 | 1_3:+69997827 | Msa0137540:CDS |
| TGTGACGTTGCGGCGTGAAA+GGG | 0.468432 | 1_3:-69996045 | None:intergenic |
| GTTACCGAAAAGTGGGTTGA+TGG | 0.476547 | 1_3:+70002189 | Msa0137540:CDS |
| CTATCATTTCTTGCCAATAC+GGG | 0.481213 | 1_3:+69997263 | Msa0137540:CDS |
| CCTCGCCTGATGACATTAGC+TGG | 0.482367 | 1_3:+70002222 | Msa0137540:CDS |
| TACTTGGGCACGTGCGAAAG+AGG | 0.484463 | 1_3:+69997980 | Msa0137540:CDS |
| TACCCCAATGGAGTCGTTGA+GGG | 0.484655 | 1_3:+70005846 | Msa0137540:CDS |
| CAATGGAGTCGTTGAGGGAA+AGG | 0.485272 | 1_3:+70005851 | Msa0137540:CDS |
| GAAATTGGTCTGTCCCTCCA+TGG | 0.485714 | 1_3:-70001017 | None:intergenic |
| AACGGCAGCCTCGTGGATAA+CGG | 0.493801 | 1_3:-69996413 | None:intergenic |
| TGAAGAAATTGTCCAGTGGA+TGG | 0.496361 | 1_3:+70000387 | Msa0137540:CDS |
| GGTGACTTTGTTATTAGCAA+TGG | 0.497008 | 1_3:-69996377 | None:intergenic |
| TGCAAATATCCATTAGGCTC+GGG | 0.498380 | 1_3:-69998937 | None:intergenic |
| AGCAGATGGATCATCAGCTT+GGG | 0.498557 | 1_3:-70005398 | None:intergenic |
| TGAAGCTAACTCAACAATTG+AGG | 0.500307 | 1_3:+70005351 | Msa0137540:CDS |
| CAATACGGGTTCGGAAAACC+TGG | 0.501361 | 1_3:+69997277 | Msa0137540:CDS |
| GTAAACCAGCTAATGTCATC+AGG | 0.504398 | 1_3:-70002227 | None:intergenic |
| TTGCGGCGTGAAAGGGGAAG+TGG | 0.509358 | 1_3:-69996038 | None:intergenic |
| TACTAGTTGGTGAGTTACTT+GGG | 0.509631 | 1_3:+69997965 | Msa0137540:intron |
| TTTACTCCGCACCCTCATGC+TGG | 0.516515 | 1_3:+70001245 | Msa0137540:CDS |
| AAGCAGATGGATCATCAGCT+TGG | 0.520046 | 1_3:-70005399 | None:intergenic |
| ATCGCCTGGTTACCGAAAAG+TGG | 0.520705 | 1_3:+70002181 | Msa0137540:CDS |
| TTGTCTCCAGCATGAGGGTG+CGG | 0.520931 | 1_3:-70001251 | None:intergenic |
| TAGCTGGTTTACGGCGTAGA+GGG | 0.525572 | 1_3:+70002238 | Msa0137540:CDS |
| GAGGAATTGGAATCACTAGA+AGG | 0.525621 | 1_3:+70002292 | Msa0137540:CDS |
| ACCCTCATGCTGGAGACAAA+TGG | 0.525756 | 1_3:+70001255 | Msa0137540:CDS |
| ATGGTTTCCATCCCATCCAC+TGG | 0.525936 | 1_3:-70000399 | None:intergenic |
| CAATGTTGGTCGATGCGGTA+AGG | 0.527243 | 1_3:-69996989 | None:intergenic |
| ATGCAAATATCCATTAGGCT+CGG | 0.528175 | 1_3:-69998938 | None:intergenic |
| AACAGTTCGGGTGCAGCCAT+CGG | 0.529593 | 1_3:-69996437 | None:intergenic |
| GATGGCTGCACCCGAACTGT+TGG | 0.531877 | 1_3:+69996439 | Msa0137540:CDS |
| ATCTGACACTAAAATTCTTG+TGG | 0.531883 | 1_3:+70005920 | Msa0137540:CDS |
| TCGGGTGCAGCCATCGGTAA+CGG | 0.532486 | 1_3:-69996431 | None:intergenic |
| TAGTCCAGAGGAAAATTTGA+AGG | 0.536130 | 1_3:+69998395 | Msa0137540:CDS |
| AGAAGAAATTGAACAGTCCA+TGG | 0.538575 | 1_3:+70001000 | Msa0137540:CDS |
| AATATTCCCATACATAAGGT+TGG | 0.540298 | 1_3:-70002016 | None:intergenic |
| TATTTACCAACCTTATGTAT+GGG | 0.540656 | 1_3:+70002010 | Msa0137540:CDS |
| TCGCCTTGAATATCATGTTA+GGG | 0.540818 | 1_3:+70005181 | Msa0137540:CDS |
| CAAAACAGCTCCTCGAACAA+TGG | 0.541666 | 1_3:+70005214 | Msa0137540:CDS |
| AATGGAGTCGTTGAGGGAAA+GGG | 0.546147 | 1_3:+70005852 | Msa0137540:CDS |
| CGAAAAGTGGGTTGATGGGT+GGG | 0.548227 | 1_3:+70002194 | Msa0137540:CDS |
| AGACGTGGTCTTGTAGAAGA+AGG | 0.551914 | 1_3:+70001068 | Msa0137540:CDS |
| ACAACATATTCCAGCAATGT+TGG | 0.552257 | 1_3:-69997003 | None:intergenic |
| CACTGTTATGTCGAAGCGCA+AGG | 0.554048 | 1_3:+70002058 | Msa0137540:CDS |
| CCGAAAAGTGGGTTGATGGG+TGG | 0.554800 | 1_3:+70002193 | Msa0137540:CDS |
| CACGAGGCTGCCGTTACCGA+TGG | 0.559303 | 1_3:+69996421 | Msa0137540:CDS |
| GGTTGTCTTGCACCCACTCA+AGG | 0.560414 | 1_3:+70005235 | Msa0137540:CDS |
| GGCTGATGCAAAAGCTGTCA+AGG | 0.561646 | 1_3:+69998011 | Msa0137540:CDS |
| TGTTGGAAACCTTATTTACA+CGG | 0.564262 | 1_3:+69996456 | Msa0137540:CDS |
| TCTAAGATATCTTCCTTCGA+AGG | 0.564653 | 1_3:-69996292 | None:intergenic |
| GGATTGAGATCTTCTTCTGG+TGG | 0.565763 | 1_3:-69998357 | None:intergenic |
| CGTGCGAAAGAGGCTTCCAT+GGG | 0.566216 | 1_3:+69997990 | Msa0137540:CDS |
| AACAGACAAAATACCTTGAG+TGG | 0.566641 | 1_3:-70005248 | None:intergenic |
| GAGTGAGAAAGAAACAAGTG+AGG | 0.569932 | 1_3:-69995995 | None:intergenic |
| GATGGGATGGAAACCATTCA+AGG | 0.570675 | 1_3:+70000405 | Msa0137540:CDS |
| ATTACCTTGTAGAAAGCAGA+TGG | 0.572394 | 1_3:-70005412 | None:intergenic |
| TCCAGCAATGTTGGTCGATG+CGG | 0.576314 | 1_3:-69996994 | None:intergenic |
| TGATCCATCTGCTTTCTACA+AGG | 0.576675 | 1_3:+70005408 | Msa0137540:CDS |
| TGCAAGACAACCATTGTTCG+AGG | 0.578367 | 1_3:-70005224 | None:intergenic |
| CACCATTTGTCTCCAGCATG+AGG | 0.578697 | 1_3:-70001257 | None:intergenic |
| GAAGGAAGATATCTTAGAGA+AGG | 0.581067 | 1_3:+69996297 | Msa0137540:CDS |
| TGATATATGTGCAGGTGTTG+AGG | 0.586897 | 1_3:+69997739 | Msa0137540:intron |
| TCGCCTGGTTACCGAAAAGT+GGG | 0.588105 | 1_3:+70002182 | Msa0137540:CDS |
| TTACCGAAAAGTGGGTTGAT+GGG | 0.590330 | 1_3:+70002190 | Msa0137540:CDS |
| GTGACGTTGCGGCGTGAAAG+GGG | 0.590845 | 1_3:-69996044 | None:intergenic |
| GGAATATGTTGTTTCATCCA+AGG | 0.591177 | 1_3:+69997014 | Msa0137540:CDS |
| GAAGAAGAAGATGCCTTCGA+AGG | 0.592034 | 1_3:+69996279 | Msa0137540:CDS |
| AACGTCACAGAAACACATAC+AGG | 0.593068 | 1_3:+69996059 | Msa0137540:CDS |
| AAATTGTCCAGTGGATGGGA+TGG | 0.593412 | 1_3:+70000392 | Msa0137540:CDS |
| TTTGCATATTGGTCATGCCA+AGG | 0.597648 | 1_3:+69998954 | Msa0137540:CDS |
| ATACCCCAATGGAGTCGTTG+AGG | 0.601714 | 1_3:+70005845 | Msa0137540:CDS |
| GCCGTGGAGCTCATAAGAAG+AGG | 0.606247 | 1_3:+70000544 | Msa0137540:CDS |
| GTCTTGCTTCATTCGCAGTG+TGG | 0.607399 | 1_3:-70001096 | None:intergenic |
| GAAGAAATTGTCCAGTGGAT+GGG | 0.608057 | 1_3:+70000388 | Msa0137540:CDS |
| AGAGAAACCTGCTAAAGTAG+AGG | 0.608147 | 1_3:+69998213 | Msa0137540:CDS |
| TTCCCTCAACGACTCCATTG+GGG | 0.610483 | 1_3:-70005848 | None:intergenic |
| GAAATTGAACAGTCCATGGA+GGG | 0.611407 | 1_3:+70001004 | Msa0137540:CDS |
| AATAAATTTGAAGAAGCGTG+TGG | 0.620386 | 1_3:+69997305 | Msa0137540:CDS |
| TTTGATATTCCCTAGTCCAG+AGG | 0.621334 | 1_3:+69998383 | Msa0137540:CDS |
| AGTGAGCATAATCATAACTT+GGG | 0.623564 | 1_3:-70001286 | None:intergenic |
| GGGTTGGCAAAAGACAGAGA+TGG | 0.630895 | 1_3:+69999087 | Msa0137540:CDS |
| AAGCATTTGAAAGCAACAGG+TGG | 0.630979 | 1_3:+69998892 | Msa0137540:CDS |
| ACCATTTGTCTCCAGCATGA+GGG | 0.632136 | 1_3:-70001256 | None:intergenic |
| GAGATGGAGGTTGCTACCTG+AGG | 0.632641 | 1_3:+69999103 | Msa0137540:CDS |
| CAGGTTGCAACAAAATACCC+TGG | 0.634042 | 1_3:+69996961 | Msa0137540:intron |
| AGCATTTGAAAGCAACAGGT+GGG | 0.637401 | 1_3:+69998893 | Msa0137540:CDS |
| CATCGGTAACGGCAGCCTCG+TGG | 0.638213 | 1_3:-69996420 | None:intergenic |
| ACCTCTTCTTATGAGCTCCA+CGG | 0.641721 | 1_3:-70000545 | None:intergenic |
| AAATATCCATTAGGCTCGGG+AGG | 0.644834 | 1_3:-69998934 | None:intergenic |
| CCAGCTAATGTCATCAGGCG+AGG | 0.651747 | 1_3:-70002222 | None:intergenic |
| ACAACCAATAGTATGAAGCA+CGG | 0.653300 | 1_3:-70001974 | None:intergenic |
| TTGGCAAAAGACAGAGATGG+AGG | 0.655596 | 1_3:+69999090 | Msa0137540:CDS |
| ACAGACAAAATACCTTGAGT+GGG | 0.656269 | 1_3:-70005247 | None:intergenic |
| GATAACGGCGGTGAGATTGG+TGG | 0.656822 | 1_3:-69996398 | None:intergenic |
| TTAGCTGGTTTACGGCGTAG+AGG | 0.660909 | 1_3:+70002237 | Msa0137540:CDS |
| AGAATTGTATGATTTAGCCG+TGG | 0.661708 | 1_3:+70000528 | Msa0137540:CDS |
| TGATTATGCTCACTGCATCG+TGG | 0.676182 | 1_3:+70001295 | Msa0137540:CDS |
| AGAAATTGAACAGTCCATGG+AGG | 0.677303 | 1_3:+70001003 | Msa0137540:CDS |
| ATCATTGCAGGTGAAAACAA+CGG | 0.687951 | 1_3:+69997223 | Msa0137540:intron |
| GATGCGGTAAGGCATTTCCA+GGG | 0.696093 | 1_3:-69996978 | None:intergenic |
| GGCGTGAAAGGGGAAGTGGA+TGG | 0.701985 | 1_3:-69996034 | None:intergenic |
| ACATTGAAGAAATTGTCCAG+TGG | 0.705711 | 1_3:+70000383 | Msa0137540:CDS |
| GGCAGCCTCGTGGATAACGG+CGG | 0.708962 | 1_3:-69996410 | None:intergenic |
| GCAAAATTATATGAGCTACT+GGG | 0.716316 | 1_3:+69998145 | Msa0137540:CDS |
| TATGTGTTTCTGTGACGTTG+CGG | 0.733501 | 1_3:-69996055 | None:intergenic |
| TCTCACCGCCGTTATCCACG+AGG | 0.734573 | 1_3:+69996405 | Msa0137540:CDS |
| GATTTGGTTGTAGACACCTG+AGG | 0.739238 | 1_3:+70000959 | Msa0137540:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAAATAGAATAAA+AGG | - | chr1_3:69996886-69996905 | None:intergenic | 10.0% |
| !!! | ATATTATCTATTTTACTTTT+TGG | + | chr1_3:69997138-69997157 | Msa0137540:intron | 10.0% |
| !! | CACATTATATAAATATATTT+GGG | - | chr1_3:70001541-70001560 | None:intergenic | 10.0% |
| !!! | AATAAAGTATTAAATGATTA+AGG | - | chr1_3:70002760-70002779 | None:intergenic | 10.0% |
| !! | AGAAATAAATAAATAAATCA+AGG | - | chr1_3:70003528-70003547 | None:intergenic | 10.0% |
| !! | GCAAATAAATAAATAAATTA+TGG | + | chr1_3:70003718-70003737 | Msa0137540:intron | 10.0% |
| !! | AAATAAATAAATTATGGTAT+TGG | + | chr1_3:70003724-70003743 | Msa0137540:intron | 10.0% |
| !!! | TACTTTTCTTTTTTAAATTA+CGG | + | chr1_3:70004413-70004432 | Msa0137540:intron | 10.0% |
| !!! | TGCATTTTATTTTTAAAATG+AGG | - | chr1_3:69998431-69998450 | None:intergenic | 15.0% |
| !! | ACTTAAAACAATAAATCAAA+GGG | - | chr1_3:69999030-69999049 | None:intergenic | 15.0% |
| !! | AACTTAAAACAATAAATCAA+AGG | - | chr1_3:69999031-69999050 | None:intergenic | 15.0% |
| !! | CTTAACAAAAAAATTGTATA+AGG | - | chr1_3:70000292-70000311 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTCTTGATGATT+TGG | + | chr1_3:70000943-70000962 | Msa0137540:intron | 15.0% |
| !! | GCACATTATATAAATATATT+TGG | - | chr1_3:70001542-70001561 | None:intergenic | 15.0% |
| !! | TATATTGATACAATTTCATA+AGG | - | chr1_3:70002094-70002113 | None:intergenic | 15.0% |
| !! | TCAAAATATGACAATTAAAA+AGG | - | chr1_3:70002664-70002683 | None:intergenic | 15.0% |
| !! | TAAATGATTAAGGTTATTAT+AGG | - | chr1_3:70002750-70002769 | None:intergenic | 15.0% |
| !! | TCATTTAATTACACTTAATA+GGG | + | chr1_3:70003129-70003148 | Msa0137540:intron | 15.0% |
| !!! | AGAATTTTAAATGGAATATT+TGG | + | chr1_3:70003302-70003321 | Msa0137540:intron | 15.0% |
| !! | ATTAATTGTATTGTACATAT+GGG | - | chr1_3:70003440-70003459 | None:intergenic | 15.0% |
| !! | AATTAATTGTATTGTACATA+TGG | - | chr1_3:70003441-70003460 | None:intergenic | 15.0% |
| !! | AATAAATAAATCAAGGTAAT+AGG | - | chr1_3:70003521-70003540 | None:intergenic | 15.0% |
| !!! | GATTTATTTATTTATTTCTG+AGG | + | chr1_3:70003529-70003548 | Msa0137540:intron | 15.0% |
| !! | ATATGTAATTACACATATAT+GGG | + | chr1_3:70003789-70003808 | Msa0137540:intron | 15.0% |
| !!! | CATGTTATTATTTCAATTTT+TGG | + | chr1_3:70004510-70004529 | Msa0137540:intron | 15.0% |
| !! | AGCTAAAAATAATGAAATAT+GGG | - | chr1_3:70005880-70005899 | None:intergenic | 15.0% |
| !!! | CTTTTTTTTTTATACTGCTT+GGG | + | chr1_3:69996096-69996115 | Msa0137540:intron | 20.0% |
| !! | TATAATTTACCGTGTAAATA+AGG | - | chr1_3:69996468-69996487 | None:intergenic | 20.0% |
| !!! | TAAGTTTTTAAGTGTATGTT+TGG | + | chr1_3:69996533-69996552 | Msa0137540:intron | 20.0% |
| !! | CATTAATAGATCAACAAAAA+TGG | - | chr1_3:69996938-69996957 | None:intergenic | 20.0% |
| !! | AGACTAAGTATTAAACATTA+AGG | - | chr1_3:69997438-69997457 | None:intergenic | 20.0% |
| !! | TTAATGTTTAATACTTAGTC+TGG | + | chr1_3:69997437-69997456 | Msa0137540:intron | 20.0% |
| !! | ATTATCCAAACATAATATGT+TGG | + | chr1_3:69998042-69998061 | Msa0137540:intron | 20.0% |
| !!! | ATGTTTTACTTTTTATCACA+TGG | + | chr1_3:69998265-69998284 | Msa0137540:intron | 20.0% |
| !!! | TTTATTTTATTTCCCTTTGA+CGG | - | chr1_3:70000029-70000048 | None:intergenic | 20.0% |
| !!! | ATACTTTTGAAACAAAAAAG+TGG | - | chr1_3:70000100-70000119 | None:intergenic | 20.0% |
| !!! | CTTAAACATCTTTTTTAACT+GGG | - | chr1_3:70000464-70000483 | None:intergenic | 20.0% |
| !!! | TCTTAAACATCTTTTTTAAC+TGG | - | chr1_3:70000465-70000484 | None:intergenic | 20.0% |
| !! | ATGTATTTATCAACCATAAA+GGG | - | chr1_3:70000663-70000682 | None:intergenic | 20.0% |
| !! | ATGTATTTATCAACCATAAA+GGG | - | chr1_3:70000663-70000682 | None:intergenic | 20.0% |
| !! | AATTAATGTGGAATAACTTA+TGG | + | chr1_3:70000862-70000881 | Msa0137540:intron | 20.0% |
| !! | AATAAAATTACACAATTCAG+TGG | - | chr1_3:70001358-70001377 | None:intergenic | 20.0% |
| !!! | ATTTATATAATGTGCACTTT+TGG | + | chr1_3:70001547-70001566 | Msa0137540:intron | 20.0% |
| !!! | TTTATATAATGTGCACTTTT+GGG | + | chr1_3:70001548-70001567 | Msa0137540:intron | 20.0% |
| !!! | TTCATATAGTATTTTATGCA+CGG | + | chr1_3:70001638-70001657 | Msa0137540:intron | 20.0% |
| !!! | TTTTATCAACAAACAAAGAA+AGG | - | chr1_3:70002519-70002538 | None:intergenic | 20.0% |
| !! | TAAATATATAGGGGTAATAT+AGG | + | chr1_3:70002804-70002823 | Msa0137540:intron | 20.0% |
| !! | CTCATTTAATTACACTTAAT+AGG | + | chr1_3:70003128-70003147 | Msa0137540:intron | 20.0% |
| !! | CATTTAATTACACTTAATAG+GGG | + | chr1_3:70003130-70003149 | Msa0137540:intron | 20.0% |
| !!! | CATGCTATACAAAATTTTAT+TGG | - | chr1_3:70003378-70003397 | None:intergenic | 20.0% |
| !!! | AAATTATGGTATTGGAAATT+TGG | + | chr1_3:70003732-70003751 | Msa0137540:intron | 20.0% |
| !! | CATATGTAATTACACATATA+TGG | + | chr1_3:70003788-70003807 | Msa0137540:intron | 20.0% |
| !!! | AAAAGCCCATTATTTTAAAT+AGG | - | chr1_3:70004027-70004046 | None:intergenic | 20.0% |
| !! | AAAAGCCCATTAATTTAAAT+AGG | - | chr1_3:70004174-70004193 | None:intergenic | 20.0% |
| !! | TAGTGTTCACAATTTAAAAA+AGG | + | chr1_3:70004544-70004563 | Msa0137540:intron | 20.0% |
| !!! | CTATGGAGTTTTATTTTTTT+AGG | + | chr1_3:70005458-70005477 | Msa0137540:intron | 20.0% |
| !! | GAGCTAAAAATAATGAAATA+TGG | - | chr1_3:70005881-70005900 | None:intergenic | 20.0% |
| !!! | TATTTCATTATTTTTAGCTC+TGG | + | chr1_3:70005881-70005900 | Msa0137540:CDS | 20.0% |
| ! | CCAAGCAGTATAAAAAAAAA+AGG | - | chr1_3:69996098-69996117 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTTTTATACTGCT+TGG | + | chr1_3:69996095-69996114 | Msa0137540:intron | 25.0% |
| ! | ATGAGAAAGTAAACAAGAAT+GGG | - | chr1_3:69996137-69996156 | None:intergenic | 25.0% |
| ! | AATGAGAAAGTAAACAAGAA+TGG | - | chr1_3:69996138-69996157 | None:intergenic | 25.0% |
| ! | TAAAAACAAAGCTTAATCCA+CGG | - | chr1_3:69996211-69996230 | None:intergenic | 25.0% |
| !! | TCGATTGAAACTATTGATTA+GGG | - | chr1_3:69996252-69996271 | None:intergenic | 25.0% |
| !! | TTCGATTGAAACTATTGATT+AGG | - | chr1_3:69996253-69996272 | None:intergenic | 25.0% |
| ! | AAGTTATGTTAGTGTATGTT+TGG | - | chr1_3:69996709-69996728 | None:intergenic | 25.0% |
| ! | ACAACAAAACCAACAATATA+TGG | - | chr1_3:69997046-69997065 | None:intergenic | 25.0% |
| ! | TTGTTGTATTCGTATGATAT+AGG | + | chr1_3:69997059-69997078 | Msa0137540:intron | 25.0% |
| !!! | TTTACTTTTTGGTTGTCTAT+TGG | + | chr1_3:69997149-69997168 | Msa0137540:intron | 25.0% |
| ! | TAAAATTGACCTTAAATCTG+TGG | + | chr1_3:69997364-69997383 | Msa0137540:intron | 25.0% |
| !! | TAAATCAATGTTGTCTTTTG+TGG | - | chr1_3:69997649-69997668 | None:intergenic | 25.0% |
| ! | ATTAGGTATCAACTTAGATT+GGG | + | chr1_3:69997672-69997691 | Msa0137540:intron | 25.0% |
| ! | TTGAATTTGAATCCATTAGA+CGG | - | chr1_3:69997869-69997888 | None:intergenic | 25.0% |
| ! | TTGATCTTTATGTTACTAGT+TGG | + | chr1_3:69997952-69997971 | Msa0137540:intron | 25.0% |
| ! | TGAAATTGCAAACATTTAGT+AGG | - | chr1_3:69998291-69998310 | None:intergenic | 25.0% |
| ! | TTTGACATAATCACATATGT+CGG | - | chr1_3:69998534-69998553 | None:intergenic | 25.0% |
| ! | GTAAATTTATTGAACCTTTC+TGG | + | chr1_3:69998691-69998710 | Msa0137540:intron | 25.0% |
| !!! | ATAATTTTGAAAACCATGGA+AGG | - | chr1_3:69998729-69998748 | None:intergenic | 25.0% |
| !!! | CATCATAATTTTGAAAACCA+TGG | - | chr1_3:69998733-69998752 | None:intergenic | 25.0% |
| !! | TGAACATTTTACAACTAGTT+GGG | - | chr1_3:69999540-69999559 | None:intergenic | 25.0% |
| !! | TTGAACATTTTACAACTAGT+TGG | - | chr1_3:69999541-69999560 | None:intergenic | 25.0% |
| ! | CTAGAATAATTTCATGAGAT+AGG | - | chr1_3:69999937-69999956 | None:intergenic | 25.0% |
| ! | AAATACTATTAATTCACTGC+AGG | - | chr1_3:69999961-69999980 | None:intergenic | 25.0% |
| !! | GACCAATATTAGTATTGAAT+AGG | + | chr1_3:69999982-70000001 | Msa0137540:intron | 25.0% |
| ! | TGCCTATTCAATACTAATAT+TGG | - | chr1_3:69999987-70000006 | None:intergenic | 25.0% |
| !! | AATATTAGTATTGAATAGGC+AGG | + | chr1_3:69999986-70000005 | Msa0137540:intron | 25.0% |
| !!! | TCTTTGATTTTATCGTCAAA+TGG | - | chr1_3:70000152-70000171 | None:intergenic | 25.0% |
| ! | TTCATGTTTAAGCTATAACA+TGG | + | chr1_3:70000224-70000243 | Msa0137540:intron | 25.0% |
| !!! | TTGTTAAGTTGTATAGCTTT+TGG | + | chr1_3:70000304-70000323 | Msa0137540:intron | 25.0% |
| ! | CAAAAAAAACATACCTTGAA+TGG | - | chr1_3:70000421-70000440 | None:intergenic | 25.0% |
| ! | TTTAGCATTCATTTCATGTT+TGG | - | chr1_3:70000604-70000623 | None:intergenic | 25.0% |
| ! | TTTCATTAATTCTCCCTTTA+TGG | + | chr1_3:70000647-70000666 | Msa0137540:intron | 25.0% |
| ! | CATGTATTTATCAACCATAA+AGG | - | chr1_3:70000664-70000683 | None:intergenic | 25.0% |
| ! | GATGTATTTATCAACCATAA+AGG | - | chr1_3:70000736-70000755 | None:intergenic | 25.0% |
| ! | ATTGCCAAAATGTTAAGAAT+TGG | - | chr1_3:70000788-70000807 | None:intergenic | 25.0% |
| !!! | ATTCTTAACATTTTGGCAAT+TGG | + | chr1_3:70000788-70000807 | Msa0137540:intron | 25.0% |
| ! | TCAACATAGAGTAATTAATG+TGG | + | chr1_3:70000850-70000869 | Msa0137540:intron | 25.0% |
| !!! | AGATTCAATGATTCTGAAAT+TGG | - | chr1_3:70001035-70001054 | None:intergenic | 25.0% |
| !! | AGAATCATTGAATCTTTTTG+AGG | + | chr1_3:70001040-70001059 | Msa0137540:CDS | 25.0% |
| !!! | TTTTGTTGTTATTTCCTCTT+CGG | + | chr1_3:70001405-70001424 | Msa0137540:intron | 25.0% |
| ! | TGGTATAAGTGTAAGAAATT+TGG | + | chr1_3:70001608-70001627 | Msa0137540:intron | 25.0% |
| !!! | GCTGTTATTGATTTAACAAA+TGG | + | chr1_3:70001743-70001762 | Msa0137540:intron | 25.0% |
| !!! | TCAGTCATTTTTGTTTACTT+AGG | + | chr1_3:70001831-70001850 | Msa0137540:intron | 25.0% |
| ! | GAATCAAGAAAATACACATT+TGG | - | chr1_3:70001860-70001879 | None:intergenic | 25.0% |
| ! | TATTTACCAACCTTATGTAT+GGG | + | chr1_3:70002010-70002029 | Msa0137540:CDS | 25.0% |
| ! | TTATAGACAGTACAATAAAG+TGG | - | chr1_3:70002119-70002138 | None:intergenic | 25.0% |
| ! | AATAGTTCAAAATAAAGGAC+TGG | - | chr1_3:70002146-70002165 | None:intergenic | 25.0% |
| ! | TGGAGAATAGTTCAAAATAA+AGG | - | chr1_3:70002151-70002170 | None:intergenic | 25.0% |
| ! | ACTAATAAGATATTGCAACA+TGG | + | chr1_3:70002487-70002506 | Msa0137540:intron | 25.0% |
| ! | ATAAAACCAAACATCAATGT+AGG | + | chr1_3:70002533-70002552 | Msa0137540:intron | 25.0% |
| !!! | AGTAAAAGTATTTGTTGTCT+TGG | - | chr1_3:70002700-70002719 | None:intergenic | 25.0% |
| ! | TCTCTCTGCAATAAATATAT+AGG | + | chr1_3:70002793-70002812 | Msa0137540:intron | 25.0% |
| ! | CTCTCTGCAATAAATATATA+GGG | + | chr1_3:70002794-70002813 | Msa0137540:intron | 25.0% |
| ! | TCTCTGCAATAAATATATAG+GGG | + | chr1_3:70002795-70002814 | Msa0137540:intron | 25.0% |
| ! | TGCAAAAGTGACAATTATAA+AGG | + | chr1_3:70002891-70002910 | Msa0137540:intron | 25.0% |
| ! | AAGTGACAATTATAAAGGAA+CGG | + | chr1_3:70002896-70002915 | Msa0137540:intron | 25.0% |
| !!! | TTTAGTTTTAAAACTGAACC+TGG | - | chr1_3:70003196-70003215 | None:intergenic | 25.0% |
| !! | TTTGCGCTAAGAATTTTAAA+TGG | + | chr1_3:70003293-70003312 | Msa0137540:intron | 25.0% |
| ! | TATTTGGCCTATTTATTGAA+AGG | + | chr1_3:70003318-70003337 | Msa0137540:intron | 25.0% |
| ! | TTAGTAGCCTTTCAATAAAT+AGG | - | chr1_3:70003328-70003347 | None:intergenic | 25.0% |
| ! | CTAAGAATATATTTCCTACA+AGG | + | chr1_3:70003344-70003363 | Msa0137540:intron | 25.0% |
| !! | ACAATTAATTTTGTAGAGCT+TGG | + | chr1_3:70003451-70003470 | Msa0137540:intron | 25.0% |
| !!! | ATTTATTTCTGAGGCTAATA+AGG | + | chr1_3:70003538-70003557 | Msa0137540:intron | 25.0% |
| ! | TCATTCCAAATTACAAAGTA+AGG | - | chr1_3:70003566-70003585 | None:intergenic | 25.0% |
| ! | TCTTAAAAGATTTGGATATG+TGG | - | chr1_3:70003906-70003925 | None:intergenic | 25.0% |
| !! | CCTGACCTATTTAAAATAAT+GGG | + | chr1_3:70004019-70004038 | Msa0137540:intron | 25.0% |
| ! | CCTGACCTATTTAAATTAAT+GGG | + | chr1_3:70004166-70004185 | Msa0137540:intron | 25.0% |
| ! | TAAGGAAACCATGTAAATTT+AGG | - | chr1_3:70004302-70004321 | None:intergenic | 25.0% |
| !! | TTTCCTTATTCATAATTTGC+AGG | + | chr1_3:70004314-70004333 | Msa0137540:intron | 25.0% |
| !! | ATTTGGATTTAAGGTTAAAG+AGG | + | chr1_3:70004372-70004391 | Msa0137540:intron | 25.0% |
| !! | TTTGGATTTAAGGTTAAAGA+GGG | + | chr1_3:70004373-70004392 | Msa0137540:intron | 25.0% |
| ! | ATCTACAAGTATTTATAGCT+AGG | - | chr1_3:70004718-70004737 | None:intergenic | 25.0% |
| ! | GTTAAAGAAACAAGAGAAAA+TGG | - | chr1_3:70004793-70004812 | None:intergenic | 25.0% |
| ! | TCAACTGTGAAGTAATTAAT+TGG | - | chr1_3:70004917-70004936 | None:intergenic | 25.0% |
| !!! | GTTGTATTGTCATTTTTGTT+TGG | + | chr1_3:70004986-70005005 | Msa0137540:intron | 25.0% |
| ! | TTTATTTCAATGCAAAACCA+GGG | - | chr1_3:70005077-70005096 | None:intergenic | 25.0% |
| ! | ATTTATTTCAATGCAAAACC+AGG | - | chr1_3:70005078-70005097 | None:intergenic | 25.0% |
| !! | ATTTTGTGGGAATTAGAATT+GGG | - | chr1_3:70005591-70005610 | None:intergenic | 25.0% |
| ! | NNNNNTAAGAACTGTTTGAG+AGG | - | chr1_3:70005625-70005644 | None:intergenic | 25.0% |
| !!! | AATTTGTTACTTCTACAACA+AGG | - | chr1_3:70005782-70005801 | None:intergenic | 25.0% |
| !! | GTAACAAATTTTATGTTCTC+TGG | + | chr1_3:70005792-70005811 | Msa0137540:intron | 25.0% |
| !!! | CTGGCTATTTTTTTTTTAAC+AGG | + | chr1_3:70005811-70005830 | Msa0137540:intron | 25.0% |
| ! | ATTCTTTTCTTTATCATCCG+TGG | + | chr1_3:69996191-69996210 | Msa0137540:intron | 30.0% |
| !! | CTCGATCTTTTTCTAAAGAT+CGG | + | chr1_3:69996328-69996347 | Msa0137540:CDS | 30.0% |
| AAATAAGGTTTCCAACAGTT+CGG | - | chr1_3:69996453-69996472 | None:intergenic | 30.0% | |
| ! | TGTTGGAAACCTTATTTACA+CGG | + | chr1_3:69996456-69996475 | Msa0137540:CDS | 30.0% |
| !!! | TTAAGTGTATGTTTGGCTTT+TGG | + | chr1_3:69996540-69996559 | Msa0137540:intron | 30.0% |
| !!! | TGATTTTTCGACTCTAGAAT+TGG | + | chr1_3:69996588-69996607 | Msa0137540:intron | 30.0% |
| TACAGTGACAAGAATTGATT+TGG | - | chr1_3:69996683-69996702 | None:intergenic | 30.0% | |
| ATGAACCGTTTATCCAAAAA+TGG | + | chr1_3:69996842-69996861 | Msa0137540:intron | 30.0% | |
| !!! | TATGGCCATTTTTGGATAAA+CGG | - | chr1_3:69996850-69996869 | None:intergenic | 30.0% |
| TGTTGATCTATTAATGTTGC+AGG | + | chr1_3:69996942-69996961 | Msa0137540:intron | 30.0% | |
| GTATTCGTATGATATAGGAT+TGG | + | chr1_3:69997064-69997083 | Msa0137540:intron | 30.0% | |
| !!! | TTTTTGGTTGTCTATTGGTT+TGG | + | chr1_3:69997154-69997173 | Msa0137540:intron | 30.0% |
| ACTATCATTTCTTGCCAATA+CGG | + | chr1_3:69997262-69997281 | Msa0137540:CDS | 30.0% | |
| CTTCAAATTTATTCACATCC+AGG | - | chr1_3:69997298-69997317 | None:intergenic | 30.0% | |
| ! | AATAAATTTGAAGAAGCGTG+TGG | + | chr1_3:69997305-69997324 | Msa0137540:CDS | 30.0% |
| TGTTTAATACTTAGTCTGGT+TGG | + | chr1_3:69997441-69997460 | Msa0137540:intron | 30.0% | |
| ! | AGCTTAGTGTTGTTAATTAG+CGG | + | chr1_3:69997470-69997489 | Msa0137540:intron | 30.0% |
| !! | ACAACATTGATTTAGCCATT+AGG | + | chr1_3:69997655-69997674 | Msa0137540:intron | 30.0% |
| !! | CAATCTAAGTTGATACCTAA+TGG | - | chr1_3:69997673-69997692 | None:intergenic | 30.0% |
| CATTAGGTATCAACTTAGAT+TGG | + | chr1_3:69997671-69997690 | Msa0137540:intron | 30.0% | |
| !! | AGTTCTGGAGTTCAATTATA+TGG | + | chr1_3:69997706-69997725 | Msa0137540:intron | 30.0% |
| ACATGATATGATATATGTGC+AGG | + | chr1_3:69997731-69997750 | Msa0137540:intron | 30.0% | |
| ! | AGCTGTTAATGAAGTATTTG+AGG | + | chr1_3:69997784-69997803 | Msa0137540:CDS | 30.0% |
| ! | TGAAGTATTTGAGGAGAATA+AGG | + | chr1_3:69997793-69997812 | Msa0137540:CDS | 30.0% |
| ! | TGTTCAATTTTTCCGTCTAA+TGG | + | chr1_3:69997854-69997873 | Msa0137540:intron | 30.0% |
| TCCAAACATAATATGTTGGA+TGG | + | chr1_3:69998046-69998065 | Msa0137540:intron | 30.0% | |
| GATGGCTAATTTATTATTGC+AGG | + | chr1_3:69998064-69998083 | Msa0137540:intron | 30.0% | |
| TGCAAAATTATATGAGCTAC+TGG | + | chr1_3:69998144-69998163 | Msa0137540:CDS | 30.0% | |
| GCAAAATTATATGAGCTACT+GGG | + | chr1_3:69998145-69998164 | Msa0137540:CDS | 30.0% | |
| ! | TTCTCTTTCTTCTTTTTGGA+AGG | - | chr1_3:69998199-69998218 | None:intergenic | 30.0% |
| ! | AGGTTTCTCTTTCTTCTTTT+TGG | - | chr1_3:69998203-69998222 | None:intergenic | 30.0% |
| ! | AATACCTTCAAATTTTCCTC+TGG | - | chr1_3:69998402-69998421 | None:intergenic | 30.0% |
| !!! | ATGAGCATCATTTTGATTTC+AGG | + | chr1_3:69998801-69998820 | Msa0137540:intron | 30.0% |
| CCAATATGCAAATATCCATT+AGG | - | chr1_3:69998946-69998965 | None:intergenic | 30.0% | |
| ! | CCTAATGGATATTTGCATAT+TGG | + | chr1_3:69998943-69998962 | Msa0137540:CDS | 30.0% |
| !!! | AGGCGATGTTTATTGATTTT+GGG | + | chr1_3:69999067-69999086 | Msa0137540:intron | 30.0% |
| !!! | GATGTTTATTGATTTTGGGT+TGG | + | chr1_3:69999071-69999090 | Msa0137540:CDS | 30.0% |
| TATGGAGATGAAACATTTAC+AGG | + | chr1_3:69999206-69999225 | Msa0137540:intron | 30.0% | |
| ! | TATTTGTGTGTTCAGCATTT+TGG | + | chr1_3:69999234-69999253 | Msa0137540:intron | 30.0% |
| AGAAATCAAGGAAAATGTAC+AGG | + | chr1_3:69999302-69999321 | Msa0137540:intron | 30.0% | |
| AAAGCAGGAGAAAATAAAGA+GGG | - | chr1_3:69999449-69999468 | None:intergenic | 30.0% | |
| !! | TTTATTTTCTCCTGCTTTCT+AGG | + | chr1_3:69999451-69999470 | Msa0137540:intron | 30.0% |
| TTGTTAAAATCCTAGAAAGC+AGG | - | chr1_3:69999464-69999483 | None:intergenic | 30.0% | |
| !!! | TGCTTTCTAGGATTTTAACA+AGG | + | chr1_3:69999463-69999482 | Msa0137540:intron | 30.0% |
| TATCTCTAAACCTATCTTCA+TGG | - | chr1_3:69999494-69999513 | None:intergenic | 30.0% | |
| ATGAAGATAGGTTTAGAGAT+AGG | + | chr1_3:69999493-69999512 | Msa0137540:intron | 30.0% | |
| !! | TCGATTAAAAGCTTGTTAGT+TGG | + | chr1_3:69999596-69999615 | Msa0137540:intron | 30.0% |
| !! | CGATTAAAAGCTTGTTAGTT+GGG | + | chr1_3:69999597-69999616 | Msa0137540:intron | 30.0% |
| TCTTTACCTCTTTACATCTA+TGG | + | chr1_3:69999773-69999792 | Msa0137540:intron | 30.0% | |
| ! | AGTTGATGTTATGCTGATAT+AGG | + | chr1_3:70000055-70000074 | Msa0137540:intron | 30.0% |
| TTGAAACAAAAAAGTGGATG+TGG | - | chr1_3:70000094-70000113 | None:intergenic | 30.0% | |
| ! | TGATTTTATCGTCAAATGGT+AGG | - | chr1_3:70000148-70000167 | None:intergenic | 30.0% |
| TAGAAAAACGTTAAGTCTGA+AGG | - | chr1_3:70000199-70000218 | None:intergenic | 30.0% | |
| ! | TATTCTTTCTTTTCTGCTTC+AGG | - | chr1_3:70000355-70000374 | None:intergenic | 30.0% |
| !!! | AACATCTTTTTTAACTGGGT+AGG | - | chr1_3:70000460-70000479 | None:intergenic | 30.0% |
| !! | TTTCATTGATTCTCCCTTTA+TGG | + | chr1_3:70000719-70000738 | Msa0137540:intron | 30.0% |
| ! | AGCACCAATTCTTAACATTT+TGG | + | chr1_3:70000781-70000800 | Msa0137540:intron | 30.0% |
| TAATGTGGAATAACTTATGG+AGG | + | chr1_3:70000865-70000884 | Msa0137540:intron | 30.0% | |
| CCTTAATTCGATATGCAATA+AGG | - | chr1_3:70001151-70001170 | None:intergenic | 30.0% | |
| CCTTATTGCATATCGAATTA+AGG | + | chr1_3:70001148-70001167 | Msa0137540:CDS | 30.0% | |
| AGTGAGCATAATCATAACTT+GGG | - | chr1_3:70001289-70001308 | None:intergenic | 30.0% | |
| TAAGATAAAGCTTAATACGC+TGG | + | chr1_3:70001453-70001472 | Msa0137540:intron | 30.0% | |
| CTAATGCAGAAAGAGAATTT+AGG | - | chr1_3:70001482-70001501 | None:intergenic | 30.0% | |
| TAAGTGTAAGAAATTTGGAC+TGG | + | chr1_3:70001613-70001632 | Msa0137540:intron | 30.0% | |
| GTATTTACCAACCTTATGTA+TGG | + | chr1_3:70002009-70002028 | Msa0137540:CDS | 30.0% | |
| AATATTCCCATACATAAGGT+TGG | - | chr1_3:70002019-70002038 | None:intergenic | 30.0% | |
| CTTGAATATTCCCATACATA+AGG | - | chr1_3:70002023-70002042 | None:intergenic | 30.0% | |
| CTTATGTATGGGAATATTCA+AGG | + | chr1_3:70002021-70002040 | Msa0137540:CDS | 30.0% | |
| ! | AATTCTTTTGTTCGAGGAAT+TGG | + | chr1_3:70002279-70002298 | Msa0137540:CDS | 30.0% |
| GACAATTAAAAAGGAACAGA+GGG | - | chr1_3:70002655-70002674 | None:intergenic | 30.0% | |
| TGACAATTAAAAAGGAACAG+AGG | - | chr1_3:70002656-70002675 | None:intergenic | 30.0% | |
| ! | GTTCAAAGCATCATTAATTG+TGG | - | chr1_3:70002835-70002854 | None:intergenic | 30.0% |
| TTAAATGAGAAAGTTGAGCT+CGG | - | chr1_3:70003117-70003136 | None:intergenic | 30.0% | |
| TTAATTACACTTAATAGGGG+TGG | + | chr1_3:70003133-70003152 | Msa0137540:intron | 30.0% | |
| TAATTACACTTAATAGGGGT+GGG | + | chr1_3:70003134-70003153 | Msa0137540:intron | 30.0% | |
| TAAAGTCTTTGACAGCTAAT+AGG | - | chr1_3:70003231-70003250 | None:intergenic | 30.0% | |
| !!! | CAAAGACTTTATTTTAAGCC+TGG | + | chr1_3:70003240-70003259 | Msa0137540:intron | 30.0% |
| TAAAATTCTTAGCGCAAACT+AGG | - | chr1_3:70003291-70003310 | None:intergenic | 30.0% | |
| ATATTTCCTACAAGGCTAAT+TGG | + | chr1_3:70003352-70003371 | Msa0137540:intron | 30.0% | |
| !! | GCTTATTAGCCTTTACAAAA+TGG | - | chr1_3:70003481-70003500 | None:intergenic | 30.0% |
| AGGTTCCTTACTTTGTAATT+TGG | + | chr1_3:70003558-70003577 | Msa0137540:intron | 30.0% | |
| ACAATAGCAAGAGATTAAGA+GGG | + | chr1_3:70003596-70003615 | Msa0137540:intron | 30.0% | |
| TAACGAATACACATACATTC+TGG | - | chr1_3:70003627-70003646 | None:intergenic | 30.0% | |
| GTATGTGTATTCGTTAGAAT+TGG | + | chr1_3:70003631-70003650 | Msa0137540:intron | 30.0% | |
| CCAATTAGTTACAAAACTCT+TGG | - | chr1_3:70003672-70003691 | None:intergenic | 30.0% | |
| !! | CCAAGAGTTTTGTAACTAAT+TGG | + | chr1_3:70003669-70003688 | Msa0137540:intron | 30.0% |
| !!! | CAATTTGTTTTTTGCCATCT+GGG | - | chr1_3:70003699-70003718 | None:intergenic | 30.0% |
| ! | TATGGTATTGGAAATTTGGA+AGG | + | chr1_3:70003736-70003755 | Msa0137540:intron | 30.0% |
| GAAGGGAATCTTAAAAGATT+TGG | - | chr1_3:70003914-70003933 | None:intergenic | 30.0% | |
| ! | ATTTTAAATAGGTCAGGCTA+AGG | - | chr1_3:70004016-70004035 | None:intergenic | 30.0% |
| ! | GCCTGACCTATTTAAAATAA+TGG | + | chr1_3:70004018-70004037 | Msa0137540:intron | 30.0% |
| !!! | CCCATTATTTTAAATAGGTC+AGG | - | chr1_3:70004022-70004041 | None:intergenic | 30.0% |
| AAAGCCTGACCTATTTAAAT+AGG | - | chr1_3:70004143-70004162 | None:intergenic | 30.0% | |
| GCCTGACCTATTTAAATTAA+TGG | + | chr1_3:70004165-70004184 | Msa0137540:intron | 30.0% | |
| CCCATTAATTTAAATAGGTC+AGG | - | chr1_3:70004169-70004188 | None:intergenic | 30.0% | |
| AACCATGTAAATTTAGGAGT+GGG | - | chr1_3:70004296-70004315 | None:intergenic | 30.0% | |
| AAACCATGTAAATTTAGGAG+TGG | - | chr1_3:70004297-70004316 | None:intergenic | 30.0% | |
| GAACCTGCAAATTATGAATA+AGG | - | chr1_3:70004320-70004339 | None:intergenic | 30.0% | |
| TCTTGCTGAATATTACACTT+AGG | + | chr1_3:70004345-70004364 | Msa0137540:intron | 30.0% | |
| CTTGCTGAATATTACACTTA+GGG | + | chr1_3:70004346-70004365 | Msa0137540:intron | 30.0% | |
| ! | TTGGATTTAAGGTTAAAGAG+GGG | + | chr1_3:70004374-70004393 | Msa0137540:intron | 30.0% |
| ACCTTTGCAAGTTTAGTAAA+AGG | + | chr1_3:70004876-70004895 | Msa0137540:intron | 30.0% | |
| ! | ACCTTTTACTAAACTTGCAA+AGG | - | chr1_3:70004880-70004899 | None:intergenic | 30.0% |
| !! | CATCATGTTTTATTCTTCCT+TGG | + | chr1_3:70004964-70004983 | Msa0137540:intron | 30.0% |
| CAAAAATGACAATACAACCA+AGG | - | chr1_3:70004984-70005003 | None:intergenic | 30.0% | |
| ! | TCTGTTTGATTTCTTTCTAC+AGG | + | chr1_3:70005265-70005284 | Msa0137540:intron | 30.0% |
| !! | TTGAGGTTGATGCAAAAAAA+TGG | + | chr1_3:70005368-70005387 | Msa0137540:CDS | 30.0% |
| ! | CATTTTGTGGGAATTAGAAT+TGG | - | chr1_3:70005592-70005611 | None:intergenic | 30.0% |
| !! | CAAGAATTTTAGTGTCAGAT+GGG | - | chr1_3:70005920-70005939 | None:intergenic | 30.0% |
| !! | ACAAGAATTTTAGTGTCAGA+TGG | - | chr1_3:70005921-70005940 | None:intergenic | 30.0% |
| ATCTGACACTAAAATTCTTG+TGG | + | chr1_3:70005920-70005939 | Msa0137540:CDS | 30.0% | |
| ! | TCTAAGATATCTTCCTTCGA+AGG | - | chr1_3:69996295-69996314 | None:intergenic | 35.0% |
| GAAGGAAGATATCTTAGAGA+AGG | + | chr1_3:69996297-69996316 | Msa0137540:CDS | 35.0% | |
| !! | GGTGACTTTGTTATTAGCAA+TGG | - | chr1_3:69996380-69996399 | None:intergenic | 35.0% |
| AATAAGGTTTCCAACAGTTC+GGG | - | chr1_3:69996452-69996471 | None:intergenic | 35.0% | |
| TCAACAAAAATGGCAACTTC+AGG | - | chr1_3:69996928-69996947 | None:intergenic | 35.0% | |
| ACAACATATTCCAGCAATGT+TGG | - | chr1_3:69997006-69997025 | None:intergenic | 35.0% | |
| !! | GGAATATGTTGTTTCATCCA+AGG | + | chr1_3:69997014-69997033 | Msa0137540:CDS | 35.0% |
| ACAATATATGGTTCACACCT+TGG | - | chr1_3:69997034-69997053 | None:intergenic | 35.0% | |
| AGGTGTGAACCATATATTGT+TGG | + | chr1_3:69997034-69997053 | Msa0137540:intron | 35.0% | |
| !!! | GTTTGGAAGGTTTTTTACCT+TGG | + | chr1_3:69997171-69997190 | Msa0137540:intron | 35.0% |
| TGAGAAAGAGAATAACTCCA+AGG | - | chr1_3:69997191-69997210 | None:intergenic | 35.0% | |
| GAGTTATTCTCTTTCTCACA+TGG | + | chr1_3:69997193-69997212 | Msa0137540:intron | 35.0% | |
| TATTCTCTTTCTCACATGGA+TGG | + | chr1_3:69997197-69997216 | Msa0137540:intron | 35.0% | |
| ATCATTGCAGGTGAAAACAA+CGG | + | chr1_3:69997223-69997242 | Msa0137540:intron | 35.0% | |
| CTATCATTTCTTGCCAATAC+GGG | + | chr1_3:69997263-69997282 | Msa0137540:CDS | 35.0% | |
| !!! | TGGGTATCAACTTTTAGTTC+TGG | + | chr1_3:69997691-69997710 | Msa0137540:intron | 35.0% |
| !! | TTACTAGTTGGTGAGTTACT+TGG | + | chr1_3:69997964-69997983 | Msa0137540:intron | 35.0% |
| !! | TACTAGTTGGTGAGTTACTT+GGG | + | chr1_3:69997965-69997984 | Msa0137540:intron | 35.0% |
| GCCATCCAACATATTATGTT+TGG | - | chr1_3:69998050-69998069 | None:intergenic | 35.0% | |
| ! | GCAATTTCACTCGCTTTATT+AGG | + | chr1_3:69998302-69998321 | Msa0137540:intron | 35.0% |
| !! | AATGGATTGAGATCTTCTTC+TGG | - | chr1_3:69998363-69998382 | None:intergenic | 35.0% |
| GGACTAGGGAATATCAAAAA+TGG | - | chr1_3:69998381-69998400 | None:intergenic | 35.0% | |
| ! | TCAAATTTTCCTCTGGACTA+GGG | - | chr1_3:69998395-69998414 | None:intergenic | 35.0% |
| ! | TTCAAATTTTCCTCTGGACT+AGG | - | chr1_3:69998396-69998415 | None:intergenic | 35.0% |
| TAGTCCAGAGGAAAATTTGA+AGG | + | chr1_3:69998395-69998414 | Msa0137540:CDS | 35.0% | |
| AGAATAGTACCATCGCTAAA+AGG | - | chr1_3:69998841-69998860 | None:intergenic | 35.0% | |
| ATGCAAATATCCATTAGGCT+CGG | - | chr1_3:69998941-69998960 | None:intergenic | 35.0% | |
| AGTTTAAGCAATTCTGTCTC+AGG | + | chr1_3:69999047-69999066 | Msa0137540:intron | 35.0% | |
| !!! | CAGGCGATGTTTATTGATTT+TGG | + | chr1_3:69999066-69999085 | Msa0137540:intron | 35.0% |
| GAATAAAAAATGCACACCTC+AGG | - | chr1_3:69999122-69999141 | None:intergenic | 35.0% | |
| AGTCATAGAGGTTCTTCATA+TGG | + | chr1_3:69999188-69999207 | Msa0137540:intron | 35.0% | |
| TTAGACGTTGAGAGAAATCA+AGG | + | chr1_3:69999290-69999309 | Msa0137540:intron | 35.0% | |
| ! | AGATAGTGTTATTAAGCCGT+GGG | + | chr1_3:69999333-69999352 | Msa0137540:intron | 35.0% |
| AAGCAGGAGAAAATAAAGAG+GGG | - | chr1_3:69999448-69999467 | None:intergenic | 35.0% | |
| GAAAGCAGGAGAAAATAAAG+AGG | - | chr1_3:69999450-69999469 | None:intergenic | 35.0% | |
| ! | CAACCATCGTTGTTGTTAAA+AGG | + | chr1_3:69999558-69999577 | Msa0137540:intron | 35.0% |
| TTGGGCATATTATTCACACT+TGG | + | chr1_3:69999615-69999634 | Msa0137540:intron | 35.0% | |
| ! | CAAGGTATCCTGTTTATAGA+CGG | + | chr1_3:69999678-69999697 | Msa0137540:intron | 35.0% |
| ! | AAGGTATCCTGTTTATAGAC+GGG | + | chr1_3:69999679-69999698 | Msa0137540:intron | 35.0% |
| CTAGCTCATTCTTACAAAAC+CGG | - | chr1_3:69999887-69999906 | None:intergenic | 35.0% | |
| AGTCTGGTGTGTTGAAATTT+GGG | - | chr1_3:69999912-69999931 | None:intergenic | 35.0% | |
| ATGTTATGCTGATATAGGTC+TGG | + | chr1_3:70000060-70000079 | Msa0137540:intron | 35.0% | |
| AAAAAGTGGATGTGGATGAT+AGG | - | chr1_3:70000086-70000105 | None:intergenic | 35.0% | |
| TCGTCAAATGGTAGGTATAT+AGG | - | chr1_3:70000140-70000159 | None:intergenic | 35.0% | |
| ACATTGAAGAAATTGTCCAG+TGG | + | chr1_3:70000383-70000402 | Msa0137540:CDS | 35.0% | |
| CGGCTAAATCATACAATTCT+TGG | - | chr1_3:70000528-70000547 | None:intergenic | 35.0% | |
| AGAATTGTATGATTTAGCCG+TGG | + | chr1_3:70000528-70000547 | Msa0137540:CDS | 35.0% | |
| TTGTGCTTATGTTGATCATC+AGG | + | chr1_3:70000567-70000586 | Msa0137540:CDS | 35.0% | |
| GCATTCATTTCATGTTTGGT+AGG | - | chr1_3:70000600-70000619 | None:intergenic | 35.0% | |
| ! | TGAGGAGATAAAGGAGTATA+GGG | + | chr1_3:70000977-70000996 | Msa0137540:CDS | 35.0% |
| AGAAGAAATTGAACAGTCCA+TGG | + | chr1_3:70001000-70001019 | Msa0137540:CDS | 35.0% | |
| TCTAAGGGGACAATTTCTTA+CGG | + | chr1_3:70001201-70001220 | Msa0137540:intron | 35.0% | |
| CAGTGAGCATAATCATAACT+TGG | - | chr1_3:70001290-70001309 | None:intergenic | 35.0% | |
| !! | TCGGCAAAGTTGATAATGTT+TGG | + | chr1_3:70001424-70001443 | Msa0137540:intron | 35.0% |
| TAGCTGTTCATTATAGCAGT+TGG | + | chr1_3:70001578-70001597 | Msa0137540:intron | 35.0% | |
| TTATAGCAGTTGGAGTTTGT+TGG | + | chr1_3:70001588-70001607 | Msa0137540:intron | 35.0% | |
| !!! | TTTTTTTGTGCTTGACTTGC+TGG | + | chr1_3:70001802-70001821 | Msa0137540:intron | 35.0% |
| !!! | TTTTTTGTGCTTGACTTGCT+GGG | + | chr1_3:70001803-70001822 | Msa0137540:intron | 35.0% |
| ACAACCAATAGTATGAAGCA+CGG | - | chr1_3:70001977-70001996 | None:intergenic | 35.0% | |
| ! | TATTGGTTGTTGCATGCATT+AGG | + | chr1_3:70001987-70002006 | Msa0137540:CDS | 35.0% |
| ! | TGATGACATTAGCTGGTTTA+CGG | + | chr1_3:70002229-70002248 | Msa0137540:CDS | 35.0% |
| ! | GCAATCAATTCTTTTGTTCG+AGG | + | chr1_3:70002273-70002292 | Msa0137540:CDS | 35.0% |
| ATTTGTGACTGTTCAGCAAT+AGG | + | chr1_3:70002339-70002358 | Msa0137540:intron | 35.0% | |
| ! | ATCGTTTTCGCTTCATATGA+AGG | + | chr1_3:70002458-70002477 | Msa0137540:intron | 35.0% |
| ! | TCGTTTTCGCTTCATATGAA+GGG | + | chr1_3:70002459-70002478 | Msa0137540:intron | 35.0% |
| CAACAAACAAAGAAAGGAAG+AGG | - | chr1_3:70002513-70002532 | None:intergenic | 35.0% | |
| GATACTCCTACATTGATGTT+TGG | - | chr1_3:70002542-70002561 | None:intergenic | 35.0% | |
| TAACACAAGACATAAGTGAG+AGG | - | chr1_3:70002577-70002596 | None:intergenic | 35.0% | |
| ATGTCTTGTGTTACGATACT+TGG | + | chr1_3:70002584-70002603 | Msa0137540:intron | 35.0% | |
| TTGTGTTACGATACTTGGTT+TGG | + | chr1_3:70002589-70002608 | Msa0137540:intron | 35.0% | |
| TGTGTTACGATACTTGGTTT+GGG | + | chr1_3:70002590-70002609 | Msa0137540:intron | 35.0% | |
| TGACAATTATAAAGGAACGG+AGG | + | chr1_3:70002899-70002918 | Msa0137540:intron | 35.0% | |
| GACAATTATAAAGGAACGGA+GGG | + | chr1_3:70002900-70002919 | Msa0137540:intron | 35.0% | |
| TCTCTTATGACCGAATAACA+TGG | - | chr1_3:70002955-70002974 | None:intergenic | 35.0% | |
| ATGTTATTCGGTCATAAGAG+AGG | + | chr1_3:70002954-70002973 | Msa0137540:intron | 35.0% | |
| TGTTATTCGGTCATAAGAGA+GGG | + | chr1_3:70002955-70002974 | Msa0137540:intron | 35.0% | |
| ! | TTCGTTAGTAGAGTTTTCTC+TGG | + | chr1_3:70003016-70003035 | Msa0137540:intron | 35.0% |
| ! | TAGTAGAGTTTTCTCTGGTT+AGG | + | chr1_3:70003021-70003040 | Msa0137540:intron | 35.0% |
| ! | TCTGGTTTATCTCTTTCGTT+CGG | + | chr1_3:70003068-70003087 | Msa0137540:intron | 35.0% |
| TTAAAACTAAAGCCTAAGCC+TGG | + | chr1_3:70003205-70003224 | Msa0137540:intron | 35.0% | |
| ! | CTTGGACATCCATTTTGTAA+AGG | + | chr1_3:70003469-70003488 | Msa0137540:intron | 35.0% |
| GACAATAGCAAGAGATTAAG+AGG | + | chr1_3:70003595-70003614 | Msa0137540:intron | 35.0% | |
| AACTAATTGGAAATCCCAGA+TGG | + | chr1_3:70003682-70003701 | Msa0137540:intron | 35.0% | |
| !!! | GCAATTTGTTTTTTGCCATC+TGG | - | chr1_3:70003700-70003719 | None:intergenic | 35.0% |
| TTTGTGTGGACAGAAATCAA+TGG | + | chr1_3:70003945-70003964 | Msa0137540:intron | 35.0% | |
| GCTCGTTTAGTAAATAGGTA+AGG | - | chr1_3:70004063-70004082 | None:intergenic | 35.0% | |
| ACCTATTTACTAAACGAGCT+AGG | + | chr1_3:70004064-70004083 | Msa0137540:intron | 35.0% | |
| TCCTAGCTCGTTTAGTAAAT+AGG | - | chr1_3:70004068-70004087 | None:intergenic | 35.0% | |
| ATTTACTAAACGAGCTAGGA+TGG | + | chr1_3:70004068-70004087 | Msa0137540:intron | 35.0% | |
| TTTACTAAACGAGCTAGGAT+GGG | + | chr1_3:70004069-70004088 | Msa0137540:intron | 35.0% | |
| ATGGCCTATTTAAATAGGTC+AGG | + | chr1_3:70004136-70004155 | Msa0137540:intron | 35.0% | |
| GCTCGTTTAGTAAATAGGTT+AGG | - | chr1_3:70004210-70004229 | None:intergenic | 35.0% | |
| ACCTATTTACTAAACGAGCT+AGG | + | chr1_3:70004064-70004083 | Msa0137540:intron | 35.0% | |
| TCCTAGCTCGTTTAGTAAAT+AGG | - | chr1_3:70004068-70004087 | None:intergenic | 35.0% | |
| ATTTACTAAACGAGCTAGGA+TGG | + | chr1_3:70004068-70004087 | Msa0137540:intron | 35.0% | |
| TTTACTAAACGAGCTAGGAT+GGG | + | chr1_3:70004069-70004088 | Msa0137540:intron | 35.0% | |
| GTAAATTTAGGAGTGGGAAT+AGG | - | chr1_3:70004290-70004309 | None:intergenic | 35.0% | |
| TTCCCACTCCTAAATTTACA+TGG | + | chr1_3:70004291-70004310 | Msa0137540:intron | 35.0% | |
| TATTACACTTAGGGTGCATT+TGG | + | chr1_3:70004355-70004374 | Msa0137540:intron | 35.0% | |
| TTAGGGTGCATTTGGATTTA+AGG | + | chr1_3:70004363-70004382 | Msa0137540:intron | 35.0% | |
| AAAGTAACTCAGAATACCGA+GGG | - | chr1_3:70004610-70004629 | None:intergenic | 35.0% | |
| AAAAGTAACTCAGAATACCG+AGG | - | chr1_3:70004611-70004630 | None:intergenic | 35.0% | |
| ! | TTTTGTTCTCAAGAGCTTCT+AGG | + | chr1_3:70004817-70004836 | Msa0137540:intron | 35.0% |
| TAGTTTCACCAACATTGTAG+TGG | + | chr1_3:70004849-70004868 | Msa0137540:intron | 35.0% | |
| AGGTAATACCACTACAATGT+TGG | - | chr1_3:70004860-70004879 | None:intergenic | 35.0% | |
| GCAAGTTTAGTAAAAGGTAG+AGG | + | chr1_3:70004882-70004901 | Msa0137540:intron | 35.0% | |
| TTATGTTCTTGCTCTTGTTG+TGG | - | chr1_3:70005053-70005072 | None:intergenic | 35.0% | |
| TCGCCTTGAATATCATGTTA+GGG | + | chr1_3:70005181-70005200 | Msa0137540:CDS | 35.0% | |
| CTTCCCTAACATGATATTCA+AGG | - | chr1_3:70005187-70005206 | None:intergenic | 35.0% | |
| ACAGACAAAATACCTTGAGT+GGG | - | chr1_3:70005250-70005269 | None:intergenic | 35.0% | |
| AACAGACAAAATACCTTGAG+TGG | - | chr1_3:70005251-70005270 | None:intergenic | 35.0% | |
| AACAACCTTGCAAGAAAGAA+AGG | - | chr1_3:70005320-70005339 | None:intergenic | 35.0% | |
| TGAAGCTAACTCAACAATTG+AGG | + | chr1_3:70005351-70005370 | Msa0137540:CDS | 35.0% | |
| ATTACCTTGTAGAAAGCAGA+TGG | - | chr1_3:70005415-70005434 | None:intergenic | 35.0% | |
| TCTGCTTTCTACAAGGTAAT+TGG | + | chr1_3:70005415-70005434 | Msa0137540:intron | 35.0% | |
| CTGCTTTCTACAAGGTAATT+GGG | + | chr1_3:70005416-70005435 | Msa0137540:intron | 35.0% | |
| GTTGAAGACTGATATCTCTA+TGG | + | chr1_3:70005441-70005460 | Msa0137540:intron | 35.0% | |
| ATTACTCTACTGTTGTCTAC+TGG | + | chr1_3:70005481-70005500 | Msa0137540:intron | 35.0% | |
| !! | GGTAGTGTTAGTCATTTTGT+GGG | - | chr1_3:70005604-70005623 | None:intergenic | 35.0% |
| !! | AGGTAGTGTTAGTCATTTTG+TGG | - | chr1_3:70005605-70005624 | None:intergenic | 35.0% |
| !!! | TTTCCCACTGATTTGGTTTT+TGG | - | chr1_3:70005961-70005980 | None:intergenic | 35.0% |
| GAGTGAGAAAGAAACAAGTG+AGG | - | chr1_3:69995998-69996017 | None:intergenic | 40.0% | |
| ! | TATGTGTTTCTGTGACGTTG+CGG | - | chr1_3:69996058-69996077 | None:intergenic | 40.0% |
| AACGTCACAGAAACACATAC+AGG | + | chr1_3:69996059-69996078 | Msa0137540:CDS | 40.0% | |
| TTTATACTGCTTGGGTTCCA+CGG | + | chr1_3:69996104-69996123 | Msa0137540:intron | 40.0% | |
| AAGAAGCTAGAAGCAAGATC+AGG | - | chr1_3:69996509-69996528 | None:intergenic | 40.0% | |
| !! | TGCAGTACTATGGCCATTTT+TGG | - | chr1_3:69996858-69996877 | None:intergenic | 40.0% |
| AAAGGTCATCTGCAGTACTA+TGG | - | chr1_3:69996868-69996887 | None:intergenic | 40.0% | |
| !! | TGGTTGTCTATTGGTTTGGA+AGG | + | chr1_3:69997158-69997177 | Msa0137540:intron | 40.0% |
| !! | CATGGATGGATTATCATTGC+AGG | + | chr1_3:69997211-69997230 | Msa0137540:intron | 40.0% |
| ATTTCTTGCCAATACGGGTT+CGG | + | chr1_3:69997268-69997287 | Msa0137540:CDS | 40.0% | |
| CAAACGACACCACAGATTTA+AGG | - | chr1_3:69997376-69997395 | None:intergenic | 40.0% | |
| !! | CTTAAATCTGTGGTGTCGTT+TGG | + | chr1_3:69997374-69997393 | Msa0137540:intron | 40.0% |
| ! | TGATATATGTGCAGGTGTTG+AGG | + | chr1_3:69997739-69997758 | Msa0137540:intron | 40.0% |
| GAACTACGCTATCGAACAAA+TGG | + | chr1_3:69997827-69997846 | Msa0137540:CDS | 40.0% | |
| AGAGAAACCTGCTAAAGTAG+AGG | + | chr1_3:69998213-69998232 | Msa0137540:CDS | 40.0% | |
| AAACTCACCTCTACTTTAGC+AGG | - | chr1_3:69998223-69998242 | None:intergenic | 40.0% | |
| TTTGATATTCCCTAGTCCAG+AGG | + | chr1_3:69998383-69998402 | Msa0137540:CDS | 40.0% | |
| ! | TTTTATCGATGTGTCGTGTC+TGG | + | chr1_3:69998574-69998593 | Msa0137540:intron | 40.0% |
| ! | AACCTTTCTGGTCAGAGATA+TGG | + | chr1_3:69998703-69998722 | Msa0137540:intron | 40.0% |
| ! | ACAGAAGTTCCTTTTAGCGA+TGG | + | chr1_3:69998829-69998848 | Msa0137540:CDS | 40.0% |
| GACAAGCATTTGAAAGCAAC+AGG | + | chr1_3:69998889-69998908 | Msa0137540:CDS | 40.0% | |
| AAGCATTTGAAAGCAACAGG+TGG | + | chr1_3:69998892-69998911 | Msa0137540:CDS | 40.0% | |
| AGCATTTGAAAGCAACAGGT+GGG | + | chr1_3:69998893-69998912 | Msa0137540:CDS | 40.0% | |
| TGCAAATATCCATTAGGCTC+GGG | - | chr1_3:69998940-69998959 | None:intergenic | 40.0% | |
| TTTGCATATTGGTCATGCCA+AGG | + | chr1_3:69998954-69998973 | Msa0137540:CDS | 40.0% | |
| TCTTCGGCTAAAAGTCATAG+AGG | + | chr1_3:69999176-69999195 | Msa0137540:intron | 40.0% | |
| ! | GAGATAGTGTTATTAAGCCG+TGG | + | chr1_3:69999332-69999351 | Msa0137540:intron | 40.0% |
| CTGACACCCTTGTCATAATT+GGG | + | chr1_3:69999356-69999375 | Msa0137540:intron | 40.0% | |
| ACAAGGCCCAATTATGACAA+GGG | - | chr1_3:69999365-69999384 | None:intergenic | 40.0% | |
| TACAAGGCCCAATTATGACA+AGG | - | chr1_3:69999366-69999385 | None:intergenic | 40.0% | |
| ! | CATAATTGGGCCTTGTAATC+TGG | + | chr1_3:69999369-69999388 | Msa0137540:intron | 40.0% |
| CAAGGTCAAACCATGAAGAT+AGG | + | chr1_3:69999481-69999500 | Msa0137540:intron | 40.0% | |
| ! | AGGCCTTTTAACAACAACGA+TGG | - | chr1_3:69999564-69999583 | None:intergenic | 40.0% |
| ! | GTTGTTGTTAAAAGGCCTGA+TGG | + | chr1_3:69999566-69999585 | Msa0137540:intron | 40.0% |
| ! | ACAAGCTTTTAATCGACACC+TGG | - | chr1_3:69999592-69999611 | None:intergenic | 40.0% |
| GCATATTATTCACACTTGGC+TGG | + | chr1_3:69999619-69999638 | Msa0137540:intron | 40.0% | |
| TATTATTCACACTTGGCTGG+TGG | + | chr1_3:69999622-69999641 | Msa0137540:intron | 40.0% | |
| TTTACATCTATGGCACCTCT+TGG | + | chr1_3:69999783-69999802 | Msa0137540:intron | 40.0% | |
| TTACATCTATGGCACCTCTT+GGG | + | chr1_3:69999784-69999803 | Msa0137540:intron | 40.0% | |
| ATCTATCAGATGTGGGACTT+GGG | - | chr1_3:69999815-69999834 | None:intergenic | 40.0% | |
| TATCTATCAGATGTGGGACT+TGG | - | chr1_3:69999816-69999835 | None:intergenic | 40.0% | |
| AAGTCCCACATCTGATAGAT+AGG | + | chr1_3:69999815-69999834 | Msa0137540:intron | 40.0% | |
| GAGTCCTATCTATCAGATGT+GGG | - | chr1_3:69999822-69999841 | None:intergenic | 40.0% | |
| AGAGTCCTATCTATCAGATG+TGG | - | chr1_3:69999823-69999842 | None:intergenic | 40.0% | |
| !! | TCTTACAAAACCGGCTTGAA+AGG | - | chr1_3:69999878-69999897 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGAATGAGCT+AGG | + | chr1_3:69999885-69999904 | Msa0137540:intron | 40.0% |
| GTCTGGTGTGTTGAAATTTG+GGG | - | chr1_3:69999911-69999930 | None:intergenic | 40.0% | |
| CAGTCTGGTGTGTTGAAATT+TGG | - | chr1_3:69999913-69999932 | None:intergenic | 40.0% | |
| TTTCATGAGATAGGTCAGTC+TGG | - | chr1_3:69999928-69999947 | None:intergenic | 40.0% | |
| ACATTCTACACTTCCGTCAA+AGG | + | chr1_3:70000013-70000032 | Msa0137540:intron | 40.0% | |
| CATTCTACACTTCCGTCAAA+GGG | + | chr1_3:70000014-70000033 | Msa0137540:intron | 40.0% | |
| GAATGTCCAATCCAATCACA+GGG | - | chr1_3:70000270-70000289 | None:intergenic | 40.0% | |
| ! | GTATAGCTTTTGGCACTTTC+AGG | + | chr1_3:70000314-70000333 | Msa0137540:intron | 40.0% |
| TGAAGAAATTGTCCAGTGGA+TGG | + | chr1_3:70000387-70000406 | Msa0137540:CDS | 40.0% | |
| GAAGAAATTGTCCAGTGGAT+GGG | + | chr1_3:70000388-70000407 | Msa0137540:CDS | 40.0% | |
| GCTTATGTTGATCATCAGGT+TGG | + | chr1_3:70000571-70000590 | Msa0137540:intron | 40.0% | |
| CTATACTCCTTTATCTCCTC+AGG | - | chr1_3:70000978-70000997 | None:intergenic | 40.0% | |
| ! | CTGAGGAGATAAAGGAGTAT+AGG | + | chr1_3:70000976-70000995 | Msa0137540:CDS | 40.0% |
| AGAAATTGAACAGTCCATGG+AGG | + | chr1_3:70001003-70001022 | Msa0137540:CDS | 40.0% | |
| GAAATTGAACAGTCCATGGA+GGG | + | chr1_3:70001004-70001023 | Msa0137540:CDS | 40.0% | |
| !! | CTTTTTGAGGATATGAGACG+TGG | + | chr1_3:70001053-70001072 | Msa0137540:CDS | 40.0% |
| CATTATCAACTTTGCCGAAG+AGG | - | chr1_3:70001422-70001441 | None:intergenic | 40.0% | |
| GTAAACCACTTTGCAGTTCA+GGG | - | chr1_3:70001698-70001717 | None:intergenic | 40.0% | |
| AGTAAACCACTTTGCAGTTC+AGG | - | chr1_3:70001699-70001718 | None:intergenic | 40.0% | |
| !!! | TTTTTGTGCTTGACTTGCTG+GGG | + | chr1_3:70001804-70001823 | Msa0137540:intron | 40.0% |
| !! | TTACCGAAAAGTGGGTTGAT+GGG | + | chr1_3:70002190-70002209 | Msa0137540:CDS | 40.0% |
| GTAAACCAGCTAATGTCATC+AGG | - | chr1_3:70002230-70002249 | None:intergenic | 40.0% | |
| GAGGAATTGGAATCACTAGA+AGG | + | chr1_3:70002292-70002311 | Msa0137540:CDS | 40.0% | |
| CCCTATTCGTCTCATCTATT+GGG | - | chr1_3:70002622-70002641 | None:intergenic | 40.0% | |
| CCCAATAGATGAGACGAATA+GGG | + | chr1_3:70002619-70002638 | Msa0137540:intron | 40.0% | |
| TCCCTATTCGTCTCATCTAT+TGG | - | chr1_3:70002623-70002642 | None:intergenic | 40.0% | |
| GTTATTCGGTCATAAGAGAG+GGG | + | chr1_3:70002956-70002975 | Msa0137540:intron | 40.0% | |
| GTGTAGGATTTCTTGAACTC+TGG | + | chr1_3:70003050-70003069 | Msa0137540:intron | 40.0% | |
| TATGTAAGTAAAGCTCGGTC+CGG | - | chr1_3:70003171-70003190 | None:intergenic | 40.0% | |
| TGGCCTATGTAAGTAAAGCT+CGG | - | chr1_3:70003176-70003195 | None:intergenic | 40.0% | |
| ! | TTTAGACTGGCTAATAGGTC+AGG | - | chr1_3:70003266-70003285 | None:intergenic | 40.0% |
| !! | AGGCTTTTAGACTGGCTAAT+AGG | - | chr1_3:70003271-70003290 | None:intergenic | 40.0% |
| !! | TATTGGCCAATTAGCCTTGT+AGG | - | chr1_3:70003361-70003380 | None:intergenic | 40.0% |
| TACTTCAGTGCCATAGCAAA+TGG | + | chr1_3:70003848-70003867 | Msa0137540:intron | 40.0% | |
| !! | TGATTGGTTCTATGGCACAA+TGG | - | chr1_3:70003876-70003895 | None:intergenic | 40.0% |
| !! | GCAGAATGTGATTGGTTCTA+TGG | - | chr1_3:70003884-70003903 | None:intergenic | 40.0% |
| GATATGTGGCAGAATGTGAT+TGG | - | chr1_3:70003892-70003911 | None:intergenic | 40.0% | |
| ! | AAGATTCCCTTCACCTTTTG+TGG | + | chr1_3:70003922-70003941 | Msa0137540:intron | 40.0% |
| CACAAACCACAAAAGGTGAA+GGG | - | chr1_3:70003931-70003950 | None:intergenic | 40.0% | |
| ACACAAACCACAAAAGGTGA+AGG | - | chr1_3:70003932-70003951 | None:intergenic | 40.0% | |
| !! | TTCACCTTTTGTGGTTTGTG+TGG | + | chr1_3:70003931-70003950 | Msa0137540:intron | 40.0% |
| TTTAAGTAGGGTTGGGTCAT+AGG | + | chr1_3:70004098-70004117 | Msa0137540:intron | 40.0% | |
| TCGGCATGGCCTATTTAAAT+AGG | + | chr1_3:70004131-70004150 | Msa0137540:intron | 40.0% | |
| TTTAAGTAGGGTTGGGTCAT+AGG | + | chr1_3:70004098-70004117 | Msa0137540:intron | 40.0% | |
| TATAGCTAGGCATGATAGTC+AGG | - | chr1_3:70004705-70004724 | None:intergenic | 40.0% | |
| AAGAGCAAGAACATAAACCC+TGG | + | chr1_3:70005057-70005076 | Msa0137540:intron | 40.0% | |
| GTCGCCTTGAATATCATGTT+AGG | + | chr1_3:70005180-70005199 | Msa0137540:CDS | 40.0% | |
| CTGATCCTTTCTTTCTTGCA+AGG | + | chr1_3:70005312-70005331 | Msa0137540:intron | 40.0% | |
| TGATCCATCTGCTTTCTACA+AGG | + | chr1_3:70005408-70005427 | Msa0137540:CDS | 40.0% | |
| CTGGATCTCTCAGATATTCA+GGG | - | chr1_3:70005563-70005582 | None:intergenic | 40.0% | |
| GAATTAGAATTGGGAGATCC+TGG | - | chr1_3:70005582-70005601 | None:intergenic | 40.0% | |
| ! | AAGCTCCTTTTATACCCCAA+TGG | + | chr1_3:70005834-70005853 | Msa0137540:intron | 40.0% |
| GCACCAAAAACCAAATCAGT+GGG | + | chr1_3:70005955-70005974 | Msa0137540:CDS | 40.0% | |
| ! | CAACATGTTTCCCACTGATT+TGG | - | chr1_3:70005968-70005987 | None:intergenic | 40.0% |
| CAAGAATGGGTCATATACCG+TGG | - | chr1_3:69996124-69996143 | None:intergenic | 45.0% | |
| GAAGAAGAAGATGCCTTCGA+AGG | + | chr1_3:69996279-69996298 | Msa0137540:CDS | 45.0% | |
| AAGCAAGATCAGGTGCGTAT+TGG | - | chr1_3:69996499-69996518 | None:intergenic | 45.0% | |
| CAGGTTGCAACAAAATACCC+TGG | + | chr1_3:69996961-69996980 | Msa0137540:intron | 45.0% | |
| ! | TTTGAAGAAGCGTGTGGAGT+TGG | + | chr1_3:69997311-69997330 | Msa0137540:CDS | 45.0% |
| TTGAACAAACCGCTCTTTCC+TGG | + | chr1_3:69997619-69997638 | Msa0137540:intron | 45.0% | |
| !! | GGCTTTTCAGGAGTAGCAAT+TGG | - | chr1_3:69998339-69998358 | None:intergenic | 45.0% |
| ! | TCTTCTTCTGGTGGCTTTTC+AGG | - | chr1_3:69998351-69998370 | None:intergenic | 45.0% |
| GGATTGAGATCTTCTTCTGG+TGG | - | chr1_3:69998360-69998379 | None:intergenic | 45.0% | |
| TCCAAACTAGACAAGCACAC+CGG | - | chr1_3:69998626-69998645 | None:intergenic | 45.0% | |
| !! | CAGGTGGGAAAGTTTTGACA+CGG | + | chr1_3:69998908-69998927 | Msa0137540:CDS | 45.0% |
| AAATATCCATTAGGCTCGGG+AGG | - | chr1_3:69998937-69998956 | None:intergenic | 45.0% | |
| ATATTGGTCATGCCAAGGTG+TGG | + | chr1_3:69998959-69998978 | Msa0137540:intron | 45.0% | |
| TTGGCAAAAGACAGAGATGG+AGG | + | chr1_3:69999090-69999109 | Msa0137540:CDS | 45.0% | |
| TTAGCGAACCAGTGTCTCTT+CGG | + | chr1_3:69999160-69999179 | Msa0137540:intron | 45.0% | |
| ! | ACTTTTAGCCGAAGAGACAC+TGG | - | chr1_3:69999171-69999190 | None:intergenic | 45.0% |
| GCTGACACCCTTGTCATAAT+TGG | + | chr1_3:69999355-69999374 | Msa0137540:intron | 45.0% | |
| GGCTAATGTGCCAGATTACA+AGG | - | chr1_3:69999382-69999401 | None:intergenic | 45.0% | |
| CTGATCTGAAAGTGATCAGC+AGG | - | chr1_3:69999403-69999422 | None:intergenic | 45.0% | |
| AACTAGTTGGGTCGACTACA+AGG | - | chr1_3:69999528-69999547 | None:intergenic | 45.0% | |
| GCACACTAAGTTCCTACAGT+GGG | - | chr1_3:69999656-69999675 | None:intergenic | 45.0% | |
| TGCACACTAAGTTCCTACAG+TGG | - | chr1_3:69999657-69999676 | None:intergenic | 45.0% | |
| TAGGAACTTAGTGTGCAGCA+AGG | + | chr1_3:69999660-69999679 | Msa0137540:intron | 45.0% | |
| CACATAGCCCGTCTATAAAC+AGG | - | chr1_3:69999689-69999708 | None:intergenic | 45.0% | |
| !! | CTGTTTATAGACGGGCTATG+TGG | + | chr1_3:69999687-69999706 | Msa0137540:intron | 45.0% |
| !! | TTTATAGACGGGCTATGTGG+AGG | + | chr1_3:69999690-69999709 | Msa0137540:intron | 45.0% |
| !! | TTATAGACGGGCTATGTGGA+GGG | + | chr1_3:69999691-69999710 | Msa0137540:intron | 45.0% |
| GTTAGTAGCAGAGGGAATGA+AGG | - | chr1_3:69999722-69999741 | None:intergenic | 45.0% | |
| CAGATGACGTTAGTAGCAGA+GGG | - | chr1_3:69999730-69999749 | None:intergenic | 45.0% | |
| ACAGATGACGTTAGTAGCAG+AGG | - | chr1_3:69999731-69999750 | None:intergenic | 45.0% | |
| TCTGCTACTAACGTCATCTG+TGG | + | chr1_3:69999730-69999749 | Msa0137540:intron | 45.0% | |
| ! | GAGGTGCCATAGATGTAAAG+AGG | - | chr1_3:69999782-69999801 | None:intergenic | 45.0% |
| CAATCACAGGGATCTGATGA+AGG | - | chr1_3:70000258-70000277 | None:intergenic | 45.0% | |
| CTTCATCAGATCCCTGTGAT+TGG | + | chr1_3:70000256-70000275 | Msa0137540:intron | 45.0% | |
| TCAGATCCCTGTGATTGGAT+TGG | + | chr1_3:70000261-70000280 | Msa0137540:intron | 45.0% | |
| GGAATGTCCAATCCAATCAC+AGG | - | chr1_3:70000271-70000290 | None:intergenic | 45.0% | |
| AAATTGTCCAGTGGATGGGA+TGG | + | chr1_3:70000392-70000411 | Msa0137540:CDS | 45.0% | |
| GATGGGATGGAAACCATTCA+AGG | + | chr1_3:70000405-70000424 | Msa0137540:CDS | 45.0% | |
| ACCTCTTCTTATGAGCTCCA+CGG | - | chr1_3:70000548-70000567 | None:intergenic | 45.0% | |
| GGCAATTGGCAGTTGAATCT+TGG | + | chr1_3:70000802-70000821 | Msa0137540:intron | 45.0% | |
| ! | GATTTGGTTGTAGACACCTG+AGG | + | chr1_3:70000959-70000978 | Msa0137540:intron | 45.0% |
| GTAGACACCTGAGGAGATAA+AGG | + | chr1_3:70000968-70000987 | Msa0137540:intron | 45.0% | |
| !! | AGACGTGGTCTTGTAGAAGA+AGG | + | chr1_3:70001068-70001087 | Msa0137540:CDS | 45.0% |
| GGAGTAAACTGAAGGCAGAA+AGG | - | chr1_3:70001233-70001252 | None:intergenic | 45.0% | |
| ACCATTTGTCTCCAGCATGA+GGG | - | chr1_3:70001259-70001278 | None:intergenic | 45.0% | |
| TGATTATGCTCACTGCATCG+TGG | + | chr1_3:70001295-70001314 | Msa0137540:CDS | 45.0% | |
| ! | TTTTGCCCTGAACTGCAAAG+TGG | + | chr1_3:70001690-70001709 | Msa0137540:intron | 45.0% |
| TCCATTGAAGCTTAATCGCC+TGG | + | chr1_3:70002167-70002186 | Msa0137540:intron | 45.0% | |
| ACCAGGCGATTAAGCTTCAA+TGG | - | chr1_3:70002171-70002190 | None:intergenic | 45.0% | |
| !! | GTTACCGAAAAGTGGGTTGA+TGG | + | chr1_3:70002189-70002208 | Msa0137540:CDS | 45.0% |
| !!! | GTCACGTTTCTAGCGCTTTT+CGG | - | chr1_3:70002398-70002417 | None:intergenic | 45.0% |
| CACAAGACATAAGTGAGAGG+AGG | - | chr1_3:70002574-70002593 | None:intergenic | 45.0% | |
| TCGTCTCATCTATTGGGCTA+AGG | - | chr1_3:70002616-70002635 | None:intergenic | 45.0% | |
| GCCCAATAGATGAGACGAAT+AGG | + | chr1_3:70002618-70002637 | Msa0137540:intron | 45.0% | |
| TCCATGAGCGCCATGTTATT+CGG | + | chr1_3:70002942-70002961 | Msa0137540:intron | 45.0% | |
| CACTTAATAGGGGTGGGAAT+AGG | + | chr1_3:70003140-70003159 | Msa0137540:intron | 45.0% | |
| GGACCGAGCTTTACTTACAT+AGG | + | chr1_3:70003170-70003189 | Msa0137540:intron | 45.0% | |
| GAGCTTTACTTACATAGGCC+AGG | + | chr1_3:70003175-70003194 | Msa0137540:intron | 45.0% | |
| TCTTTGACAGCTAATAGGCC+AGG | - | chr1_3:70003226-70003245 | None:intergenic | 45.0% | |
| ! | CGCAAACTAGGCTTTTAGAC+TGG | - | chr1_3:70003279-70003298 | None:intergenic | 45.0% |
| CATATATGGGCCAGCTTGAT+AGG | + | chr1_3:70003802-70003821 | Msa0137540:intron | 45.0% | |
| ! | TAGGCCTAGTAGGCTTTTCT+CGG | + | chr1_3:70003821-70003840 | Msa0137540:intron | 45.0% |
| TTTCCCGAGAAAAGCCTACT+AGG | - | chr1_3:70003828-70003847 | None:intergenic | 45.0% | |
| ! | CACAATGGCACCATTTGCTA+TGG | - | chr1_3:70003861-70003880 | None:intergenic | 45.0% |
| CTGTCCACACAAACCACAAA+AGG | - | chr1_3:70003938-70003957 | None:intergenic | 45.0% | |
| ACTTCCATGCCATAATGGCA+CGG | - | chr1_3:70003973-70003992 | None:intergenic | 45.0% | |
| GCTAAGGCTTAGAGAAAAGC+GGG | - | chr1_3:70004000-70004019 | None:intergenic | 45.0% | |
| GGCTAAGGCTTAGAGAAAAG+CGG | - | chr1_3:70004001-70004020 | None:intergenic | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | chr1_3:70004583-70004602 | None:intergenic | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | chr1_3:70004587-70004606 | None:intergenic | 45.0% | |
| ! | GTTTGGAAAGTGCATGTGTG+AGG | + | chr1_3:70005003-70005022 | Msa0137540:intron | 45.0% |
| ! | CTTGCTCTTGTTGTGGATGA+GGG | - | chr1_3:70005046-70005065 | None:intergenic | 45.0% |
| ! | TCTTGCTCTTGTTGTGGATG+AGG | - | chr1_3:70005047-70005066 | None:intergenic | 45.0% |
| ! | TTTTCCTTCTGCTGCAGTGA+TGG | + | chr1_3:70005140-70005159 | Msa0137540:intron | 45.0% |
| CAAAACAGCTCCTCGAACAA+TGG | + | chr1_3:70005214-70005233 | Msa0137540:CDS | 45.0% | |
| TGCAAGACAACCATTGTTCG+AGG | - | chr1_3:70005227-70005246 | None:intergenic | 45.0% | |
| AGCAGATGGATCATCAGCTT+GGG | - | chr1_3:70005401-70005420 | None:intergenic | 45.0% | |
| AAGCAGATGGATCATCAGCT+TGG | - | chr1_3:70005402-70005421 | None:intergenic | 45.0% | |
| !! | CTACTGGTGCTGATTCTGAT+AGG | + | chr1_3:70005497-70005516 | Msa0137540:intron | 45.0% |
| !! | GTGCTGATTCTGATAGGAAC+TGG | + | chr1_3:70005503-70005522 | Msa0137540:intron | 45.0% |
| CCTGGATCTCTCAGATATTC+AGG | - | chr1_3:70005564-70005583 | None:intergenic | 45.0% | |
| CCTGAATATCTGAGAGATCC+AGG | + | chr1_3:70005561-70005580 | Msa0137540:intron | 45.0% | |
| CGACTCCATTGGGGTATAAA+AGG | - | chr1_3:70005842-70005861 | None:intergenic | 45.0% | |
| TTTCCCTCAACGACTCCATT+GGG | - | chr1_3:70005852-70005871 | None:intergenic | 45.0% | |
| AATGGAGTCGTTGAGGGAAA+GGG | + | chr1_3:70005852-70005871 | Msa0137540:CDS | 45.0% | |
| CGCACCAAAAACCAAATCAG+TGG | + | chr1_3:70005954-70005973 | Msa0137540:CDS | 45.0% | |
| !!! | CTATTATATTAATAAATTTT+TGG | - | chr1_3:70003764-70003783 | None:intergenic | 5.0% |
| ! | GATGCGGTAAGGCATTTCCA+GGG | - | chr1_3:69996981-69997000 | None:intergenic | 50.0% |
| CAATGTTGGTCGATGCGGTA+AGG | - | chr1_3:69996992-69997011 | None:intergenic | 50.0% | |
| TCCAGCAATGTTGGTCGATG+CGG | - | chr1_3:69996997-69997016 | None:intergenic | 50.0% | |
| ! | CAGGTTTTCCGAACCCGTAT+TGG | - | chr1_3:69997279-69997298 | None:intergenic | 50.0% |
| CAATACGGGTTCGGAAAACC+TGG | + | chr1_3:69997277-69997296 | Msa0137540:CDS | 50.0% | |
| ! | GTTGTCTTTTGTGGATCGCC+AGG | - | chr1_3:69997640-69997659 | None:intergenic | 50.0% |
| ! | ACAGCTTTTGCATCAGCCCA+TGG | - | chr1_3:69998009-69998028 | None:intergenic | 50.0% |
| GGCTGATGCAAAAGCTGTCA+AGG | + | chr1_3:69998011-69998030 | Msa0137540:CDS | 50.0% | |
| CAGAGCTGACGGCAAATGTT+AGG | - | chr1_3:69998483-69998502 | None:intergenic | 50.0% | |
| TGTTAGACACTGACGCGTGT+CGG | - | chr1_3:69998511-69998530 | None:intergenic | 50.0% | |
| AAACTAGACAAGCACACCGG+TGG | - | chr1_3:69998623-69998642 | None:intergenic | 50.0% | |
| ACCGGTGTGCTTGTCTAGTT+TGG | + | chr1_3:69998622-69998641 | Msa0137540:intron | 50.0% | |
| GGCCATATCTCTGACCAGAA+AGG | - | chr1_3:69998708-69998727 | None:intergenic | 50.0% | |
| GTCAGAGATATGGCCTTCCA+TGG | + | chr1_3:69998713-69998732 | Msa0137540:intron | 50.0% | |
| ! | GGGTTGGCAAAAGACAGAGA+TGG | + | chr1_3:69999087-69999106 | Msa0137540:CDS | 50.0% |
| TGTTAAAAGGCCTGATGGCC+AGG | + | chr1_3:69999571-69999590 | Msa0137540:intron | 50.0% | |
| TTAATCGACACCTGGCCATC+AGG | - | chr1_3:69999584-69999603 | None:intergenic | 50.0% | |
| CACTAAGTTCCTACAGTGGG+AGG | - | chr1_3:69999653-69999672 | None:intergenic | 50.0% | |
| ! | GGACTTGGGTTTTTCCCAAG+AGG | - | chr1_3:69999801-69999820 | None:intergenic | 50.0% |
| ACACTCCTCTCCTTTCAAGC+CGG | + | chr1_3:69999865-69999884 | Msa0137540:intron | 50.0% | |
| !! | CAAAACCGGCTTGAAAGGAG+AGG | - | chr1_3:69999873-69999892 | None:intergenic | 50.0% |
| ATGGTTTCCATCCCATCCAC+TGG | - | chr1_3:70000402-70000421 | None:intergenic | 50.0% | |
| CTGGGTAGGAACAACGAAAG+AGG | - | chr1_3:70000446-70000465 | None:intergenic | 50.0% | |
| ! | GAAATTGGTCTGTCCCTCCA+TGG | - | chr1_3:70001020-70001039 | None:intergenic | 50.0% |
| GTCTTGCTTCATTCGCAGTG+TGG | - | chr1_3:70001099-70001118 | None:intergenic | 50.0% | |
| ACCCTCATGCTGGAGACAAA+TGG | + | chr1_3:70001255-70001274 | Msa0137540:CDS | 50.0% | |
| CACCATTTGTCTCCAGCATG+AGG | - | chr1_3:70001260-70001279 | None:intergenic | 50.0% | |
| ! | GGCAACATTCCAGAGCACTT+TGG | + | chr1_3:70001659-70001678 | Msa0137540:intron | 50.0% |
| ! | ATTCCAGAGCACTTTGGCTC+TGG | + | chr1_3:70001665-70001684 | Msa0137540:intron | 50.0% |
| ! | AAACCAGAGCCAAAGTGCTC+TGG | - | chr1_3:70001671-70001690 | None:intergenic | 50.0% |
| CACTGTTATGTCGAAGCGCA+AGG | + | chr1_3:70002058-70002077 | Msa0137540:CDS | 50.0% | |
| ATCGCCTGGTTACCGAAAAG+TGG | + | chr1_3:70002181-70002200 | Msa0137540:CDS | 50.0% | |
| TCGCCTGGTTACCGAAAAGT+GGG | + | chr1_3:70002182-70002201 | Msa0137540:CDS | 50.0% | |
| !! | CAACCCACTTTTCGGTAACC+AGG | - | chr1_3:70002188-70002207 | None:intergenic | 50.0% |
| !! | CCACCCATCAACCCACTTTT+CGG | - | chr1_3:70002196-70002215 | None:intergenic | 50.0% |
| !! | CGAAAAGTGGGTTGATGGGT+GGG | + | chr1_3:70002194-70002213 | Msa0137540:CDS | 50.0% |
| ! | TTAGCTGGTTTACGGCGTAG+AGG | + | chr1_3:70002237-70002256 | Msa0137540:CDS | 50.0% |
| ! | TAGCTGGTTTACGGCGTAGA+GGG | + | chr1_3:70002238-70002257 | Msa0137540:CDS | 50.0% |
| ACCGAATAACATGGCGCTCA+TGG | - | chr1_3:70002946-70002965 | None:intergenic | 50.0% | |
| TTCGGTCATAAGAGAGGGGA+TGG | + | chr1_3:70002960-70002979 | Msa0137540:intron | 50.0% | |
| TCTGGTTAGGAGCAGAGTGT+AGG | + | chr1_3:70003034-70003053 | Msa0137540:intron | 50.0% | |
| CTCGGAGACTCTACAATGGA+GGG | - | chr1_3:70003099-70003118 | None:intergenic | 50.0% | |
| TGAGCTCGGAGACTCTACAA+TGG | - | chr1_3:70003103-70003122 | None:intergenic | 50.0% | |
| TAATAGGGGTGGGAATAGGC+CGG | + | chr1_3:70003144-70003163 | Msa0137540:intron | 50.0% | |
| ACAGCTAATAGGCCAGGCTT+AGG | - | chr1_3:70003220-70003239 | None:intergenic | 50.0% | |
| ! | AGGCCTAGTAGGCTTTTCTC+GGG | + | chr1_3:70003822-70003841 | Msa0137540:intron | 50.0% |
| ! | TCAATGGCACCGTGCCATTA+TGG | + | chr1_3:70003961-70003980 | Msa0137540:intron | 50.0% |
| GCAGCACTTCCATGCCATAA+TGG | - | chr1_3:70003978-70003997 | None:intergenic | 50.0% | |
| !! | GATGGGCCAGGCTTTAAGTA+GGG | + | chr1_3:70004086-70004105 | Msa0137540:intron | 50.0% |
| !! | GCCAGGCTTTAAGTAGGGTT+GGG | + | chr1_3:70004091-70004110 | Msa0137540:intron | 50.0% |
| ACCCAACCCTACTTAAAGCC+TGG | - | chr1_3:70004095-70004114 | None:intergenic | 50.0% | |
| !! | GATGGGCCAGGCTTTAAGTA+GGG | + | chr1_3:70004086-70004105 | Msa0137540:intron | 50.0% |
| !! | GCCAGGCTTTAAGTAGGGTT+GGG | + | chr1_3:70004091-70004110 | Msa0137540:intron | 50.0% |
| ACCCAACCCTACTTAAAGCC+TGG | - | chr1_3:70004095-70004114 | None:intergenic | 50.0% | |
| GGTTAAAGAGGGGAAGTGAG+AGG | + | chr1_3:70004384-70004403 | Msa0137540:intron | 50.0% | |
| TAAAGAGGGGAAGTGAGAGG+AGG | + | chr1_3:70004387-70004406 | Msa0137540:intron | 50.0% | |
| AAAGAGGGGAAGTGAGAGGA+GGG | + | chr1_3:70004388-70004407 | Msa0137540:intron | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | chr1_3:70004582-70004601 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | chr1_3:70004584-70004603 | None:intergenic | 50.0% | |
| ! | ATACCGAGGGTGTGTTTGGA+TGG | - | chr1_3:70004597-70004616 | None:intergenic | 50.0% |
| ! | CAGAATACCGAGGGTGTGTT+TGG | - | chr1_3:70004601-70004620 | None:intergenic | 50.0% |
| ATACCCCAATGGAGTCGTTG+AGG | + | chr1_3:70005845-70005864 | Msa0137540:CDS | 50.0% | |
| TACCCCAATGGAGTCGTTGA+GGG | + | chr1_3:70005846-70005865 | Msa0137540:CDS | 50.0% | |
| TTCCCTCAACGACTCCATTG+GGG | - | chr1_3:70005851-70005870 | None:intergenic | 50.0% | |
| CTTTCCCTCAACGACTCCAT+TGG | - | chr1_3:70005853-70005872 | None:intergenic | 50.0% | |
| CAATGGAGTCGTTGAGGGAA+AGG | + | chr1_3:70005851-70005870 | Msa0137540:CDS | 50.0% | |
| TGTGACGTTGCGGCGTGAAA+GGG | - | chr1_3:69996048-69996067 | None:intergenic | 55.0% | |
| ! | GATAACGGCGGTGAGATTGG+TGG | - | chr1_3:69996401-69996420 | None:intergenic | 55.0% |
| ! | GTGGATAACGGCGGTGAGAT+TGG | - | chr1_3:69996404-69996423 | None:intergenic | 55.0% |
| AACGGCAGCCTCGTGGATAA+CGG | - | chr1_3:69996416-69996435 | None:intergenic | 55.0% | |
| AACAGTTCGGGTGCAGCCAT+CGG | - | chr1_3:69996440-69996459 | None:intergenic | 55.0% | |
| ! | CGATGCGGTAAGGCATTTCC+AGG | - | chr1_3:69996982-69997001 | None:intergenic | 55.0% |
| ! | ACCGCATCGACCAACATTGC+TGG | + | chr1_3:69996993-69997012 | Msa0137540:CDS | 55.0% |
| TGTGGATCGCCAGGAAAGAG+CGG | - | chr1_3:69997631-69997650 | None:intergenic | 55.0% | |
| TACTTGGGCACGTGCGAAAG+AGG | + | chr1_3:69997980-69997999 | Msa0137540:CDS | 55.0% | |
| ACGTGCGAAAGAGGCTTCCA+TGG | + | chr1_3:69997989-69998008 | Msa0137540:CDS | 55.0% | |
| CGTGCGAAAGAGGCTTCCAT+GGG | + | chr1_3:69997990-69998009 | Msa0137540:CDS | 55.0% | |
| !! | TGTCGGTGCTACAGAGCTGA+CGG | - | chr1_3:69998494-69998513 | None:intergenic | 55.0% |
| ! | TGTCCGTGTCGGTGTTTCAC+AGG | + | chr1_3:69998597-69998616 | Msa0137540:intron | 55.0% |
| TGGCCTGTGAAACACCGACA+CGG | - | chr1_3:69998603-69998622 | None:intergenic | 55.0% | |
| ATGTCGCATGCACCACACCT+TGG | - | chr1_3:69998974-69998993 | None:intergenic | 55.0% | |
| GAGATGGAGGTTGCTACCTG+AGG | + | chr1_3:69999103-69999122 | Msa0137540:CDS | 55.0% | |
| !! | ATGACAAGGGTGTCAGCCCA+CGG | - | chr1_3:69999352-69999371 | None:intergenic | 55.0% |
| GCCGTGGAGCTCATAAGAAG+AGG | + | chr1_3:70000544-70000563 | Msa0137540:CDS | 55.0% | |
| ! | GAGGGTGCGGAGTAAACTGA+AGG | - | chr1_3:70001241-70001260 | None:intergenic | 55.0% |
| TTTACTCCGCACCCTCATGC+TGG | + | chr1_3:70001245-70001264 | Msa0137540:CDS | 55.0% | |
| TTGTCTCCAGCATGAGGGTG+CGG | - | chr1_3:70001254-70001273 | None:intergenic | 55.0% | |
| CGCGCCGTGCTTCATACTAT+TGG | + | chr1_3:70001970-70001989 | Msa0137540:CDS | 55.0% | |
| !! | CCGAAAAGTGGGTTGATGGG+TGG | + | chr1_3:70002193-70002212 | Msa0137540:CDS | 55.0% |
| CCAGCTAATGTCATCAGGCG+AGG | - | chr1_3:70002225-70002244 | None:intergenic | 55.0% | |
| CCTCGCCTGATGACATTAGC+TGG | + | chr1_3:70002222-70002241 | Msa0137540:CDS | 55.0% | |
| GCTCGGAGACTCTACAATGG+AGG | - | chr1_3:70003100-70003119 | None:intergenic | 55.0% | |
| AATAGGGGTGGGAATAGGCC+GGG | + | chr1_3:70003145-70003164 | Msa0137540:intron | 55.0% | |
| ACTGGCTAATAGGTCAGGCC+AGG | - | chr1_3:70003261-70003280 | None:intergenic | 55.0% | |
| GCCAGCTTGATAGGCCTAGT+AGG | + | chr1_3:70003811-70003830 | Msa0137540:intron | 55.0% | |
| GCCTACTAGGCCTATCAAGC+TGG | - | chr1_3:70003815-70003834 | None:intergenic | 55.0% | |
| TAAACGAGCTAGGATGGGCC+AGG | + | chr1_3:70004074-70004093 | Msa0137540:intron | 55.0% | |
| !! | GGATGGGCCAGGCTTTAAGT+AGG | + | chr1_3:70004085-70004104 | Msa0137540:intron | 55.0% |
| !! | GGCCAGGCTTTAAGTAGGGT+TGG | + | chr1_3:70004090-70004109 | Msa0137540:intron | 55.0% |
| TAAACGAGCTAGGATGGGCC+AGG | + | chr1_3:70004074-70004093 | Msa0137540:intron | 55.0% | |
| !! | GGATGGGCCAGGCTTTAAGT+AGG | + | chr1_3:70004085-70004104 | Msa0137540:intron | 55.0% |
| !! | GGCCAGGCTTTAAGTAGGGT+TGG | + | chr1_3:70004090-70004109 | Msa0137540:intron | 55.0% |
| ATGGAGGGTTTAGGAGGGGA+AGG | - | chr1_3:70004578-70004597 | None:intergenic | 55.0% | |
| ! | CGAGGGTGTGTTTGGATGGA+GGG | - | chr1_3:70004593-70004612 | None:intergenic | 55.0% |
| CCTCCATCCAAACACACCCT+CGG | + | chr1_3:70004591-70004610 | Msa0137540:intron | 55.0% | |
| AGTGCCATCACTGCAGCAGA+AGG | - | chr1_3:70005147-70005166 | None:intergenic | 55.0% | |
| GGTTGTCTTGCACCCACTCA+AGG | + | chr1_3:70005235-70005254 | Msa0137540:CDS | 55.0% | |
| GGATCATCAGCTTGGGCATC+AGG | - | chr1_3:70005394-70005413 | None:intergenic | 55.0% | |
| GGCGTGAAAGGGGAAGTGGA+TGG | - | chr1_3:69996037-69996056 | None:intergenic | 60.0% | |
| TTGCGGCGTGAAAGGGGAAG+TGG | - | chr1_3:69996041-69996060 | None:intergenic | 60.0% | |
| GTGACGTTGCGGCGTGAAAG+GGG | - | chr1_3:69996047-69996066 | None:intergenic | 60.0% | |
| CTGTGACGTTGCGGCGTGAA+AGG | - | chr1_3:69996049-69996068 | None:intergenic | 60.0% | |
| TCTCACCGCCGTTATCCACG+AGG | + | chr1_3:69996405-69996424 | Msa0137540:CDS | 60.0% | |
| TCGGGTGCAGCCATCGGTAA+CGG | - | chr1_3:69996434-69996453 | None:intergenic | 60.0% | |
| GATGGCTGCACCCGAACTGT+TGG | + | chr1_3:69996439-69996458 | Msa0137540:CDS | 60.0% | |
| GTCGTGTCTGGTGTCCGTGT+CGG | + | chr1_3:69998586-69998605 | Msa0137540:intron | 60.0% | |
| ! | GTCGGTGTTTCACAGGCCAC+CGG | + | chr1_3:69998604-69998623 | Msa0137540:intron | 60.0% |
| CGGTTTCCTCCCGAGCCTAA+TGG | + | chr1_3:69998928-69998947 | Msa0137540:CDS | 60.0% | |
| GTGGCACTTCCTCCCACTGT+AGG | + | chr1_3:69999641-69999660 | Msa0137540:intron | 60.0% | |
| !! | TAGACGGGCTATGTGGAGGG+TGG | + | chr1_3:69999694-69999713 | Msa0137540:intron | 60.0% |
| !! | AGACGGGCTATGTGGAGGGT+GGG | + | chr1_3:69999695-69999714 | Msa0137540:intron | 60.0% |
| AAGTAAAGCTCGGTCCGGCC+CGG | - | chr1_3:70003166-70003185 | None:intergenic | 60.0% | |
| ! | GGCACCGTGCCATTATGGCA+TGG | + | chr1_3:70003966-70003985 | Msa0137540:intron | 60.0% |
| GTTGGGTCATAGGCCGCTGA+CGG | + | chr1_3:70004108-70004127 | Msa0137540:intron | 60.0% | |
| GTTGGGTCATAGGCCGCTGA+CGG | + | chr1_3:70004108-70004127 | Msa0137540:intron | 60.0% | |
| ! | CCGAGGGTGTGTTTGGATGG+AGG | - | chr1_3:70004594-70004613 | None:intergenic | 60.0% |
| ! | GGCAGCCTCGTGGATAACGG+CGG | - | chr1_3:69996413-69996432 | None:intergenic | 65.0% |
| ! | CATCGGTAACGGCAGCCTCG+TGG | - | chr1_3:69996423-69996442 | None:intergenic | 65.0% |
| CACGAGGCTGCCGTTACCGA+TGG | + | chr1_3:69996421-69996440 | Msa0137540:CDS | 65.0% | |
| GGTCATAGGCCGCTGACGGT+CGG | + | chr1_3:70004112-70004131 | Msa0137540:intron | 65.0% | |
| TAGGCCATGCCGACCGTCAG+CGG | - | chr1_3:70004124-70004143 | None:intergenic | 65.0% | |
| GGTCATAGGCCGCTGACGGT+CGG | + | chr1_3:70004112-70004131 | Msa0137540:intron | 65.0% | |
| TAGGCCATGCCGACCGTCAG+CGG | - | chr1_3:70004124-70004143 | None:intergenic | 65.0% | |
| TAGGCCGCTGACGGTCGGCA+TGG | + | chr1_3:70004117-70004136 | Msa0137540:intron | 70.0% | |
| TAGGCCGCTGACGGTCGGCA+TGG | + | chr1_3:70004117-70004136 | Msa0137540:intron | 70.0% | |
| GGGGTGGGAATAGGCCGGGC+CGG | + | chr1_3:70003149-70003168 | Msa0137540:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 69995988 | 70005995 | 69995988 | ID=Msa0137540;Name=Msa0137540 |
| chr1_3 | mRNA | 69995988 | 70005995 | 69995988 | ID=Msa0137540-mRNA-1;Parent=Msa0137540;Name=Msa0137540-mRNA-1;_AED=0.17;_eAED=0.18;_QI=0|0.88|0.84|1|0.88|0.84|19|0|714 |
| chr1_3 | exon | 69995988 | 69996080 | 69995988 | ID=Msa0137540-mRNA-1:exon:24249;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 69996262 | 69996477 | 69996262 | ID=Msa0137540-mRNA-1:exon:24250;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 69996964 | 69997035 | 69996964 | ID=Msa0137540-mRNA-1:exon:24251;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 69997233 | 69997332 | 69997233 | ID=Msa0137540-mRNA-1:exon:24252;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 69997753 | 69997848 | 69997753 | ID=Msa0137540-mRNA-1:exon:24253;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 69997971 | 69998032 | 69997971 | ID=Msa0137540-mRNA-1:exon:24254;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 69998133 | 69998234 | 69998133 | ID=Msa0137540-mRNA-1:exon:24255;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 69998324 | 69998416 | 69998324 | ID=Msa0137540-mRNA-1:exon:24256;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 69998823 | 69998975 | 69998823 | ID=Msa0137540-mRNA-1:exon:24257;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 69999069 | 69999124 | 69999069 | ID=Msa0137540-mRNA-1:exon:24258;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 70000336 | 70000426 | 70000336 | ID=Msa0137540-mRNA-1:exon:24259;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 70000502 | 70000588 | 70000502 | ID=Msa0137540-mRNA-1:exon:24260;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 70000972 | 70001169 | 70000972 | ID=Msa0137540-mRNA-1:exon:24261;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 70001245 | 70001343 | 70001245 | ID=Msa0137540-mRNA-1:exon:24262;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 70001948 | 70002079 | 70001948 | ID=Msa0137540-mRNA-1:exon:24263;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 70002177 | 70002313 | 70002177 | ID=Msa0137540-mRNA-1:exon:24264;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 70005157 | 70005256 | 70005157 | ID=Msa0137540-mRNA-1:exon:24265;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 70005334 | 70005429 | 70005334 | ID=Msa0137540-mRNA-1:exon:24266;Parent=Msa0137540-mRNA-1 |
| chr1_3 | exon | 70005837 | 70005995 | 70005837 | ID=Msa0137540-mRNA-1:exon:24267;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69995988 | 69996080 | 69995988 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69996262 | 69996477 | 69996262 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69996964 | 69997035 | 69996964 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69997233 | 69997332 | 69997233 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69997753 | 69997848 | 69997753 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69997971 | 69998032 | 69997971 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69998133 | 69998234 | 69998133 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69998324 | 69998416 | 69998324 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69998823 | 69998975 | 69998823 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 69999069 | 69999124 | 69999069 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 70000336 | 70000426 | 70000336 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 70000502 | 70000588 | 70000502 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 70000972 | 70001169 | 70000972 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 70001245 | 70001343 | 70001245 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 70001948 | 70002079 | 70001948 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 70002177 | 70002313 | 70002177 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 70005157 | 70005256 | 70005157 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 70005334 | 70005429 | 70005334 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| chr1_3 | CDS | 70005837 | 70005995 | 70005837 | ID=Msa0137540-mRNA-1:cds;Parent=Msa0137540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
