Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129360 | XP_013469316.1 | 88.144 | 388 | 16 | 3 | 1 | 361 | 1 | 385 | 0.0 | 672 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129360 | sp|G4LTX4|DSP4_CASSA | 63.918 | 388 | 98 | 6 | 1 | 360 | 1 | 374 | 5.47e-169 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129360 | A0A072VN06 | 88.144 | 388 | 16 | 3 | 1 | 361 | 1 | 385 | 0.0 | 672 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000290 | Msa0129360 | 0.814973 | 1.172806e-51 | -8.615850e-47 |
| Msa0018470 | Msa0129360 | 0.825956 | 3.532753e-54 | -8.615850e-47 |
| Msa0035290 | Msa0129360 | 0.953171 | 4.930028e-111 | -8.615850e-47 |
| Msa0035400 | Msa0129360 | 0.898512 | 4.935988e-77 | -8.615850e-47 |
| Msa0064550 | Msa0129360 | 0.811008 | 8.676320e-51 | -8.615850e-47 |
| Msa0067150 | Msa0129360 | 0.821734 | 3.449712e-53 | -8.615850e-47 |
| Msa0129360 | Msa0155610 | 0.820369 | 7.114858e-53 | -8.615850e-47 |
| Msa0129360 | Msa0158610 | 0.835459 | 1.657352e-56 | -8.615850e-47 |
| Msa0129360 | Msa0176040 | 0.959189 | 3.616938e-117 | -8.615850e-47 |
| Msa0129360 | Msa0198440 | 0.828210 | 1.020324e-54 | -8.615850e-47 |
| Msa0129360 | Msa0225880 | 0.856510 | 3.064130e-62 | -8.615850e-47 |
| Msa0129360 | Msa0260470 | 0.845465 | 3.994239e-59 | -8.615850e-47 |
| Msa0129360 | Msa0265580 | 0.809146 | 2.185977e-50 | -8.615850e-47 |
| Msa0129360 | Msa0278670 | 0.827456 | 1.549263e-54 | -8.615850e-47 |
| Msa0129360 | Msa0303440 | 0.808021 | 3.800307e-50 | -8.615850e-47 |
| Msa0129360 | Msa0304110 | 0.858583 | 7.456569e-63 | -8.615850e-47 |
| Msa0129360 | Msa0318070 | 0.831749 | 1.399126e-55 | -8.615850e-47 |
| Msa0129360 | Msa0341190 | 0.848378 | 6.368887e-60 | -8.615850e-47 |
| Msa0129360 | Msa0358290 | 0.841416 | 4.814463e-58 | -8.615850e-47 |
| Msa0129360 | Msa0377280 | 0.821279 | 4.392803e-53 | -8.615850e-47 |
| Msa0129360 | Msa0404690 | 0.817113 | 3.902286e-52 | -8.615850e-47 |
| Msa0129360 | Msa0412190 | 0.817588 | 3.050987e-52 | -8.615850e-47 |
| Msa0129360 | Msa0418430 | 0.838033 | 3.657208e-57 | -8.615850e-47 |
| Msa0129360 | Msa0462590 | 0.814195 | 1.743527e-51 | -8.615850e-47 |
| Msa0129360 | Msa0465800 | 0.845252 | 4.560864e-59 | -8.615850e-47 |
| Msa0129360 | Msa0472740 | 0.853572 | 2.187310e-61 | -8.615850e-47 |
| Msa0129360 | Msa0593810 | 0.802401 | 5.708673e-49 | -8.615850e-47 |
| Msa0129360 | Msa0628100 | 0.800137 | 1.659897e-48 | -8.615850e-47 |
| Msa0129360 | Msa0656680 | 0.810778 | 9.730560e-51 | -8.615850e-47 |
| Msa0129360 | Msa0746980 | 0.984672 | 3.013316e-161 | -8.615850e-47 |
| Msa0129360 | Msa0759970 | 0.801311 | 9.560898e-49 | -8.615850e-47 |
| Msa0129360 | Msa0790640 | 0.808500 | 3.004410e-50 | -8.615850e-47 |
| Msa0129360 | Msa0801360 | 0.831209 | 1.899919e-55 | -8.615850e-47 |
| Msa0129360 | Msa0818440 | 0.865649 | 5.067870e-65 | -8.615850e-47 |
| Msa0129360 | Msa0818550 | 0.874040 | 9.211429e-68 | -8.615850e-47 |
| Msa0129360 | Msa0828570 | 0.826073 | 3.313906e-54 | -8.615850e-47 |
| Msa0129360 | Msa0839830 | 0.834667 | 2.625122e-56 | -8.615850e-47 |
| Msa0129360 | Msa0858910 | 0.837825 | 4.136194e-57 | -8.615850e-47 |
| Msa0129360 | Msa0899730 | 0.835754 | 1.395643e-56 | -8.615850e-47 |
| Msa0129360 | Msa0964650 | 0.860591 | 1.856332e-63 | -8.615850e-47 |
| Msa0129360 | Msa1071640 | 0.808136 | 3.592666e-50 | -8.615850e-47 |
| Msa0129360 | Msa1153000 | -0.812456 | 4.202295e-51 | -8.615850e-47 |
| Msa0129360 | Msa1161210 | 0.808676 | 2.755230e-50 | -8.615850e-47 |
| Msa0129360 | Msa1180050 | 0.826377 | 2.804788e-54 | -8.615850e-47 |
| Msa0129360 | Msa1198450 | 0.810593 | 1.067245e-50 | -8.615850e-47 |
| Msa0129360 | Msa1212760 | 0.829339 | 5.441980e-55 | -8.615850e-47 |
| Msa0129360 | Msa1232270 | 0.848768 | 4.965338e-60 | -8.615850e-47 |
| Msa0129360 | Msa1241820 | 0.817059 | 4.013191e-52 | -8.615850e-47 |
| Msa0129360 | Msa1270770 | 0.825969 | 3.507290e-54 | -8.615850e-47 |
| Msa0129360 | Msa1388520 | 0.829934 | 3.898644e-55 | -8.615850e-47 |
| Msa0129360 | Msa1421870 | 0.829553 | 4.827418e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129360 | MtrunA17_Chr1g0197631 | 88.144 | 388 | 16 | 3 | 1 | 361 | 1 | 385 | 0.0 | 672 |
| Msa0129360 | MtrunA17_Chr3g0129011 | 42.347 | 196 | 80 | 4 | 71 | 238 | 66 | 256 | 1.81e-35 | 130 |
| Msa0129360 | MtrunA17_Chr7g0228091 | 29.818 | 275 | 148 | 10 | 97 | 333 | 328 | 595 | 2.41e-25 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129360 | AT3G52180.1 | 55.643 | 381 | 133 | 3 | 1 | 354 | 1 | 372 | 1.00e-138 | 399 |
| Msa0129360 | AT3G52180.4 | 61.511 | 278 | 80 | 1 | 105 | 355 | 1 | 278 | 6.66e-123 | 355 |
| Msa0129360 | AT3G52180.3 | 57.093 | 289 | 88 | 3 | 1 | 262 | 1 | 280 | 1.82e-98 | 293 |
| Msa0129360 | AT3G52180.2 | 57.093 | 289 | 88 | 3 | 1 | 262 | 1 | 280 | 2.80e-98 | 293 |
| Msa0129360 | AT3G10940.1 | 38.235 | 204 | 96 | 4 | 63 | 238 | 51 | 252 | 4.20e-34 | 127 |
| Msa0129360 | AT3G01510.3 | 29.963 | 267 | 141 | 8 | 97 | 324 | 140 | 399 | 3.67e-27 | 112 |
| Msa0129360 | AT3G01510.2 | 29.963 | 267 | 141 | 8 | 97 | 324 | 140 | 399 | 3.67e-27 | 112 |
| Msa0129360 | AT3G01510.1 | 29.963 | 267 | 141 | 8 | 97 | 324 | 282 | 541 | 6.80e-27 | 112 |
| Msa0129360 | AT3G52526.3 | 52.326 | 86 | 27 | 2 | 96 | 179 | 21 | 94 | 9.90e-20 | 83.6 |
Find 111 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTTGTCATCGAAATTTA+AGG | 0.130911 | 1_3:-59270437 | None:intergenic |
| TGCTCTACGGTGGAAATTTC+AGG | 0.182783 | 1_3:+59270011 | Msa0129360:CDS |
| TTCAGTTGGCATATATGTTT+TGG | 0.189491 | 1_3:+59268799 | Msa0129360:intron |
| AAACAGAATAATAGAGTTTC+TGG | 0.199837 | 1_3:+59271587 | Msa0129360:CDS |
| TTTATTTGTGCATGGTTTAT+TGG | 0.219530 | 1_3:-59271829 | None:intergenic |
| CTTTGGTACTTAAAGCTTAC+AGG | 0.220091 | 1_3:+59269945 | Msa0129360:intron |
| GTTACAGTTAGTGTAAATTT+AGG | 0.222616 | 1_3:+59271738 | Msa0129360:three_prime_UTR |
| GTTGACATGGCCATCTTTAT+TGG | 0.230768 | 1_3:-59271202 | None:intergenic |
| TTTCTTGTGCAGGCTGCTTC+TGG | 0.237212 | 1_3:+59266421 | Msa0129360:intron |
| TTGACTTATAGGCATGAATT+AGG | 0.265240 | 1_3:+59267028 | Msa0129360:CDS |
| GAAATTTCAGGACTTGATAT+TGG | 0.272062 | 1_3:+59270023 | Msa0129360:CDS |
| CGCAGTTTATCAACGTCTTC+AGG | 0.287983 | 1_3:-59267202 | None:intergenic |
| AACATTGATTTGCAGATGTC+TGG | 0.304328 | 1_3:-59271935 | None:intergenic |
| TATAAGGCAATTAATTCTAA+TGG | 0.309780 | 1_3:+59267918 | Msa0129360:CDS |
| CTTAAATTTCGATGACAAAC+AGG | 0.311977 | 1_3:+59270438 | Msa0129360:CDS |
| GGTGAACTGAAACTGAAATT+TGG | 0.325877 | 1_3:+59265082 | Msa0129360:five_prime_UTR |
| TGTAATTAGCAAATTATATA+AGG | 0.327149 | 1_3:+59267902 | Msa0129360:CDS |
| ATCCTTCCGGACTTGATTGT+TGG | 0.328796 | 1_3:+59267067 | Msa0129360:CDS |
| TGATCTACGAAAGCGGCTTC+CGG | 0.349920 | 1_3:+59267878 | Msa0129360:CDS |
| TTGACATGGCCATCTTTATT+GGG | 0.352754 | 1_3:-59271201 | None:intergenic |
| CGTTCATCCTTCGTGAGATC+AGG | 0.360339 | 1_3:-59271564 | None:intergenic |
| TTCTTCTTCTTCTCTATCCC+TGG | 0.361202 | 1_3:+59265337 | Msa0129360:CDS |
| TGAGGCTAATACACTACTTC+TGG | 0.368444 | 1_3:+59268842 | Msa0129360:CDS |
| GTTGATAAACTGCGTAAAAT+CGG | 0.380846 | 1_3:+59267211 | Msa0129360:CDS |
| TCAACAAGCAAGTGCATTGA+TGG | 0.383583 | 1_3:-59271637 | None:intergenic |
| TCGATGACAAACAGGGTTCA+TGG | 0.384520 | 1_3:+59270446 | Msa0129360:CDS |
| CAGTGGCCGTGCCTCCCTTC+GGG | 0.392669 | 1_3:+59271521 | Msa0129360:CDS |
| AATAAATAGACTCACAATAT+CGG | 0.395842 | 1_3:-59269507 | None:intergenic |
| ACACTTTAAATGTGGAGAAT+TGG | 0.404960 | 1_3:+59271894 | Msa0129360:three_prime_UTR |
| AAAGTGACAGGCTTCTTACT+AGG | 0.410763 | 1_3:-59269969 | None:intergenic |
| GATGGTTCAGAGATCCTCAT+TGG | 0.427242 | 1_3:-59271619 | None:intergenic |
| ACAGTGGCCGTGCCTCCCTT+CGG | 0.430443 | 1_3:+59271520 | Msa0129360:CDS |
| CATTCCAACCATGCTACTTA+AGG | 0.435096 | 1_3:+59265481 | Msa0129360:CDS |
| TGTTTGTCATCGAAATTTAA+GGG | 0.437209 | 1_3:-59270436 | None:intergenic |
| ACATATATACATTGCACTGC+TGG | 0.440089 | 1_3:+59267948 | Msa0129360:CDS |
| GTAACTGTCTTGTGTTGTGT+GGG | 0.447773 | 1_3:-59265056 | None:intergenic |
| TTTCAGGACTTGATATTGGA+TGG | 0.457996 | 1_3:+59270027 | Msa0129360:CDS |
| GAGTACAAGTACATTGTTGA+TGG | 0.462857 | 1_3:+59271141 | Msa0129360:CDS |
| GAACTACAACTTCATCCTTC+CGG | 0.473825 | 1_3:+59267054 | Msa0129360:CDS |
| AAGGTCATGCTGTCCAAAGC+TGG | 0.475543 | 1_3:+59269463 | Msa0129360:CDS |
| AAGATATTGTGGTGGCGAGC+AGG | 0.477727 | 1_3:-59265302 | None:intergenic |
| TCCCTTCGGGAGAGAGTGAC+TGG | 0.483806 | 1_3:+59271534 | Msa0129360:CDS |
| ATACATTGCACTGCTGGACT+TGG | 0.499456 | 1_3:+59267954 | Msa0129360:CDS |
| AAGAGACATACCGCAACAGC+TGG | 0.503978 | 1_3:-59267984 | None:intergenic |
| AGTACATTGTTGATGGAGAA+TGG | 0.504240 | 1_3:+59271148 | Msa0129360:CDS |
| TTCAGGACTTGATATTGGAT+GGG | 0.505174 | 1_3:+59270028 | Msa0129360:CDS |
| GGGTTCATGGTTTCTCAAGA+AGG | 0.505456 | 1_3:+59270459 | Msa0129360:CDS |
| TTCAGAATCTGAATCTTCCC+AGG | 0.507017 | 1_3:+59265154 | Msa0129360:CDS |
| ATGGCCATCTTTATTGGGAG+AGG | 0.509356 | 1_3:-59271196 | None:intergenic |
| TCAGGACTTGATATTGGATG+GGG | 0.510634 | 1_3:+59270029 | Msa0129360:CDS |
| TCTTGTGTTGTGTGGGGCAG+CGG | 0.510674 | 1_3:-59265049 | None:intergenic |
| ACATTGATTTGCAGATGTCT+GGG | 0.514243 | 1_3:-59271934 | None:intergenic |
| TGTGGAGAATTGGAGAATCA+TGG | 0.514741 | 1_3:+59271904 | Msa0129360:three_prime_UTR |
| TGTGCATATTTATTTGTGCA+TGG | 0.515182 | 1_3:-59271837 | None:intergenic |
| GATTGTTGGATCATGCCTGC+AGG | 0.516289 | 1_3:+59267081 | Msa0129360:CDS |
| CTTCGATAAAATTGTTGACA+TGG | 0.518353 | 1_3:-59271215 | None:intergenic |
| ATGACAGAAGCCATGGGTGC+TGG | 0.521445 | 1_3:+59266517 | Msa0129360:CDS |
| ATGGTTCAGAGATCCTCATT+GGG | 0.525064 | 1_3:-59271618 | None:intergenic |
| CTGTAACAGAGAGCTTAGTA+AGG | 0.526236 | 1_3:-59271722 | None:intergenic |
| GTTACCTTAAGTAGCATGGT+TGG | 0.527020 | 1_3:-59265485 | None:intergenic |
| TTGTGGTGGCGAGCAGGAAG+AGG | 0.530076 | 1_3:-59265296 | None:intergenic |
| TGTAACTGTCTTGTGTTGTG+TGG | 0.532380 | 1_3:-59265057 | None:intergenic |
| TGTCCCCACGACAAAGTGAC+AGG | 0.532631 | 1_3:-59269981 | None:intergenic |
| TATAATTTGCTAATTACAGC+CGG | 0.535250 | 1_3:-59267897 | None:intergenic |
| TGAAGTTACCTTAAGTAGCA+TGG | 0.535870 | 1_3:-59265489 | None:intergenic |
| ATGAAGGAAGAAAGATATTG+TGG | 0.535955 | 1_3:-59265313 | None:intergenic |
| GAGGAGGAGCAGATAGTGTG+TGG | 0.537058 | 1_3:-59265277 | None:intergenic |
| CATGATCCAACAATCAAGTC+CGG | 0.539623 | 1_3:-59267073 | None:intergenic |
| TAGCTCTGATGTCGAGGAGG+AGG | 0.541130 | 1_3:+59266468 | Msa0129360:CDS |
| GTTAGTGTAAATTTAGGATG+CGG | 0.542044 | 1_3:+59271744 | Msa0129360:three_prime_UTR |
| GTAACCTCTCCCAATAAAGA+TGG | 0.550991 | 1_3:+59271192 | Msa0129360:CDS |
| GGGACACCGCAATTGCTCTA+CGG | 0.552218 | 1_3:+59269998 | Msa0129360:CDS |
| CTCTCTCCCGAAGGGAGGCA+CGG | 0.552342 | 1_3:-59271527 | None:intergenic |
| TCTGGAAGCTCTTCCCAATG+AGG | 0.552898 | 1_3:+59271605 | Msa0129360:CDS |
| GACAAGTAGCTCTGATGTCG+AGG | 0.561197 | 1_3:+59266462 | Msa0129360:CDS |
| TAATAACATGACAGAAGCCA+TGG | 0.567902 | 1_3:+59266510 | Msa0129360:CDS |
| TGGAAGAGCTCCAGCTGTTG+CGG | 0.568883 | 1_3:+59267974 | Msa0129360:CDS |
| AAGTGACAGGCTTCTTACTA+GGG | 0.570425 | 1_3:-59269968 | None:intergenic |
| CACCAGTCACTCTCTCCCGA+AGG | 0.571656 | 1_3:-59271536 | None:intergenic |
| TGGTGGCGAGCAGGAAGAGG+AGG | 0.575579 | 1_3:-59265293 | None:intergenic |
| GAGCTACTTGTCTCTGCACT+CGG | 0.576263 | 1_3:-59266451 | None:intergenic |
| TGTGTGGGGCAGCGGTCACA+AGG | 0.580469 | 1_3:-59265041 | None:intergenic |
| GGCCACTGTCCGCATCATCA+AGG | 0.584686 | 1_3:-59271506 | None:intergenic |
| GAAGCCTGTCACTTTGTCGT+GGG | 0.585071 | 1_3:+59269977 | Msa0129360:CDS |
| ATTAAACATACCAGCACCCA+TGG | 0.588156 | 1_3:-59266527 | None:intergenic |
| ACCAGTCACTCTCTCCCGAA+GGG | 0.593295 | 1_3:-59271535 | None:intergenic |
| AGAAGCCTGTCACTTTGTCG+TGG | 0.601786 | 1_3:+59269976 | Msa0129360:CDS |
| TGAACAGGTCCTTGATGATG+CGG | 0.604730 | 1_3:+59271497 | Msa0129360:intron |
| GTCCTTGATGATGCGGACAG+TGG | 0.606712 | 1_3:+59271504 | Msa0129360:CDS |
| TTTCCACCGTAGAGCAATTG+CGG | 0.609902 | 1_3:-59270004 | None:intergenic |
| AAGGCAATTAATTCTAATGG+AGG | 0.612848 | 1_3:+59267921 | Msa0129360:CDS |
| GTGGAGAATTGGAGAATCAT+GGG | 0.613059 | 1_3:+59271905 | Msa0129360:three_prime_UTR |
| AGATTCGCACACTTTAAATG+TGG | 0.619998 | 1_3:+59271886 | Msa0129360:three_prime_UTR |
| ATCCAACAATCAAGTCCGGA+AGG | 0.629842 | 1_3:-59267069 | None:intergenic |
| TGTGTGGAATTGTAAAACAG+AGG | 0.637298 | 1_3:-59265261 | None:intergenic |
| ATTCATTTGATCTACGAAAG+CGG | 0.641783 | 1_3:+59267871 | Msa0129360:CDS |
| TTAAATTTCGATGACAAACA+GGG | 0.643133 | 1_3:+59270439 | Msa0129360:CDS |
| AAGGAAGAAAGATATTGTGG+TGG | 0.657505 | 1_3:-59265310 | None:intergenic |
| AAGTAGCTCTGATGTCGAGG+AGG | 0.659228 | 1_3:+59266465 | Msa0129360:CDS |
| ACACCGCAATTGCTCTACGG+TGG | 0.661178 | 1_3:+59270001 | Msa0129360:CDS |
| AGTCACTCTCTCCCGAAGGG+AGG | 0.664364 | 1_3:-59271532 | None:intergenic |
| GTGGAATTGTAAAACAGAGG+AGG | 0.665928 | 1_3:-59265258 | None:intergenic |
| ACAACACAAGACAGTTACAC+AGG | 0.666722 | 1_3:+59265061 | Msa0129360:five_prime_UTR |
| CAGGACTTGATATTGGATGG+GGG | 0.671888 | 1_3:+59270030 | Msa0129360:CDS |
| AAGCCTGTCACTTTGTCGTG+GGG | 0.672587 | 1_3:+59269978 | Msa0129360:CDS |
| AATAACATGACAGAAGCCAT+GGG | 0.682029 | 1_3:+59266511 | Msa0129360:CDS |
| TAACTGTCTTGTGTTGTGTG+GGG | 0.685933 | 1_3:-59265055 | None:intergenic |
| TCAGGGTTATAAACTCAATG+AGG | 0.689279 | 1_3:+59268824 | Msa0129360:CDS |
| ATGTCTGTATCATAGTGCGG+TGG | 0.699931 | 1_3:+59271861 | Msa0129360:three_prime_UTR |
| TGATGATCCTGATCTCACGA+AGG | 0.730198 | 1_3:+59271557 | Msa0129360:CDS |
| CAAATGTCTGTATCATAGTG+CGG | 0.747227 | 1_3:+59271858 | Msa0129360:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAGAAAAATATCAATTTT+AGG | - | chr1_3:59268539-59268558 | None:intergenic | 10.0% |
| !!! | ATTTATTCAAAACATTTTAT+AGG | + | chr1_3:59270608-59270627 | Msa0129360:intron | 10.0% |
| !!! | AATAGTAATTTTACATTAAA+CGG | - | chr1_3:59270916-59270935 | None:intergenic | 10.0% |
| !! | AAGGAAAAAATAAAAAGTAA+AGG | - | chr1_3:59265516-59265535 | None:intergenic | 15.0% |
| !!! | ATTTATATATAACTTTGAAG+AGG | - | chr1_3:59265600-59265619 | None:intergenic | 15.0% |
| !! | TTTAACATTAAAATAAAGCT+TGG | - | chr1_3:59266580-59266599 | None:intergenic | 15.0% |
| !! | CATAATAAACAAAATTGTTT+AGG | - | chr1_3:59267283-59267302 | None:intergenic | 15.0% |
| !!! | TTAATACTAGTTAGATATTT+TGG | + | chr1_3:59267367-59267386 | Msa0129360:intron | 15.0% |
| !! | TGTAATTAGCAAATTATATA+AGG | + | chr1_3:59267902-59267921 | Msa0129360:CDS | 15.0% |
| !!! | TTTTGTTTATATAGAAAGAT+AGG | + | chr1_3:59268499-59268518 | Msa0129360:intron | 15.0% |
| !! | TTTGTTTATATAGAAAGATA+GGG | + | chr1_3:59268500-59268519 | Msa0129360:intron | 15.0% |
| !! | AAATGTTGTAAAATCAATTT+CGG | - | chr1_3:59269011-59269030 | None:intergenic | 15.0% |
| !! | ATAATATCAAATAAGAATGA+GGG | - | chr1_3:59269209-59269228 | None:intergenic | 15.0% |
| !! | TATAATATCAAATAAGAATG+AGG | - | chr1_3:59269210-59269229 | None:intergenic | 15.0% |
| !! | CATTAACTTTCTAAATTAAA+AGG | - | chr1_3:59270104-59270123 | None:intergenic | 15.0% |
| !! | ATCAACAATACAATAAAATA+AGG | + | chr1_3:59270573-59270592 | Msa0129360:intron | 15.0% |
| !! | TCAACAATACAATAAAATAA+GGG | + | chr1_3:59270574-59270593 | Msa0129360:intron | 15.0% |
| !! | AAGATAAAGTGATTTATGTT+TGG | + | chr1_3:59265704-59265723 | Msa0129360:intron | 20.0% |
| !!! | ATTTTGAGTGAATTGATTTA+AGG | + | chr1_3:59265853-59265872 | Msa0129360:intron | 20.0% |
| !!! | AGAATTGATTTTATCATATC+TGG | - | chr1_3:59265930-59265949 | None:intergenic | 20.0% |
| !!! | AATCAAACATTCTTGTTTTT+GGG | - | chr1_3:59266353-59266372 | None:intergenic | 20.0% |
| !!! | TAATCAAACATTCTTGTTTT+TGG | - | chr1_3:59266354-59266373 | None:intergenic | 20.0% |
| !! | ATGCAAATATTATAAACACA+AGG | - | chr1_3:59266899-59266918 | None:intergenic | 20.0% |
| !! | ATAAAAATAAAAGAAGTCAG+AGG | - | chr1_3:59267166-59267185 | None:intergenic | 20.0% |
| !! | TTAACATTTCTATTTACTCA+TGG | + | chr1_3:59267746-59267765 | Msa0129360:intron | 20.0% |
| !! | TATAAGGCAATTAATTCTAA+TGG | + | chr1_3:59267918-59267937 | Msa0129360:CDS | 20.0% |
| !!! | TATGTTTTTGAGTTAATTCT+TGG | + | chr1_3:59268062-59268081 | Msa0129360:intron | 20.0% |
| !! | TTAATATGTTGTACAAAGAA+AGG | + | chr1_3:59268110-59268129 | Msa0129360:intron | 20.0% |
| !!! | AGAAATTTTCTTGTGTTTTA+AGG | - | chr1_3:59268444-59268463 | None:intergenic | 20.0% |
| !! | TTAAAACACAAGAAAATTTC+TGG | + | chr1_3:59268443-59268462 | Msa0129360:intron | 20.0% |
| !! | GATAAATATCACTTGAAATT+TGG | - | chr1_3:59268739-59268758 | None:intergenic | 20.0% |
| !! | TTTCGGAAAGAAAAAAAAAA+TGG | - | chr1_3:59268994-59269013 | None:intergenic | 20.0% |
| !! | ACTTAGTTATTTGTGAATTA+TGG | + | chr1_3:59269131-59269150 | Msa0129360:intron | 20.0% |
| !!! | ATTTGATGATTAATTCTTCT+TGG | + | chr1_3:59269361-59269380 | Msa0129360:intron | 20.0% |
| !! | AATAAATAGACTCACAATAT+CGG | - | chr1_3:59269510-59269529 | None:intergenic | 20.0% |
| !! | AAAGGAAAACATTTGTTTAA+TGG | - | chr1_3:59269748-59269767 | None:intergenic | 20.0% |
| !!! | TATTCGAGTTGATATAAAAA+GGG | - | chr1_3:59269864-59269883 | None:intergenic | 20.0% |
| !!! | ATATTCGAGTTGATATAAAA+AGG | - | chr1_3:59269865-59269884 | None:intergenic | 20.0% |
| !! | TTTATATCAACTCGAATATT+TGG | + | chr1_3:59269866-59269885 | Msa0129360:intron | 20.0% |
| !! | CATTAACCATTATTTATCTT+TGG | + | chr1_3:59269928-59269947 | Msa0129360:intron | 20.0% |
| !! | TAAGTACCAAAGATAAATAA+TGG | - | chr1_3:59269937-59269956 | None:intergenic | 20.0% |
| !!! | ACATGGAGATATTTTTTAAA+TGG | + | chr1_3:59270131-59270150 | Msa0129360:intron | 20.0% |
| !! | AAACATGATAAATGTTGTAA+TGG | - | chr1_3:59270196-59270215 | None:intergenic | 20.0% |
| !!! | TTACAACATTTATCATGTTT+TGG | + | chr1_3:59270196-59270215 | Msa0129360:intron | 20.0% |
| !! | CTTAGTTTATTTCAATAAAC+CGG | + | chr1_3:59271072-59271091 | Msa0129360:intron | 20.0% |
| ! | CTCTCTTAATACATTAGTAA+TGG | + | chr1_3:59265390-59265409 | Msa0129360:intron | 25.0% |
| ! | AATTGATAGATGAAGTTGAA+AGG | - | chr1_3:59265535-59265554 | None:intergenic | 25.0% |
| ! | CAATTTCAATTTCAATTTCG+AGG | + | chr1_3:59265556-59265575 | Msa0129360:intron | 25.0% |
| ! | TAAAGTGATTTATGTTTGGA+TGG | + | chr1_3:59265708-59265727 | Msa0129360:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr1_3:59265817-59265836 | None:intergenic | 25.0% |
| ! | ATCATATCTGGATGATTTAA+AGG | - | chr1_3:59265918-59265937 | None:intergenic | 25.0% |
| !!! | CATATGTTGGTTTTCAATTT+TGG | - | chr1_3:59265971-59265990 | None:intergenic | 25.0% |
| ! | ATGCTATTGAGAAATCTAAA+AGG | - | chr1_3:59266002-59266021 | None:intergenic | 25.0% |
| !! | ATCATTTAAAACAGGGAATT+CGG | - | chr1_3:59266079-59266098 | None:intergenic | 25.0% |
| ! | TCAAATTAGAACTACAAAGT+AGG | - | chr1_3:59266713-59266732 | None:intergenic | 25.0% |
| !!! | AAAAAACTCAGAAGCATTTT+GGG | + | chr1_3:59266744-59266763 | Msa0129360:intron | 25.0% |
| !!! | GTTTCTTTTTGTTTCACTTA+TGG | + | chr1_3:59267103-59267122 | Msa0129360:intron | 25.0% |
| ! | ATAATCATTGAAGAGCTTAT+CGG | + | chr1_3:59267517-59267536 | Msa0129360:intron | 25.0% |
| !!! | TATAATTTGCTAATTACAGC+CGG | - | chr1_3:59267900-59267919 | None:intergenic | 25.0% |
| !! | ATTATACATTAGGGCTTTTA+TGG | + | chr1_3:59268399-59268418 | Msa0129360:intron | 25.0% |
| !! | GCTTTTATGGTTGTATTTTA+GGG | + | chr1_3:59268412-59268431 | Msa0129360:intron | 25.0% |
| !!! | ATCTTCATAGTATTTTGGAT+TGG | - | chr1_3:59268623-59268642 | None:intergenic | 25.0% |
| !! | ACTCTATCTTCATAGTATTT+TGG | - | chr1_3:59268628-59268647 | None:intergenic | 25.0% |
| ! | ATTTATCAGTTTATCTCCAT+TGG | + | chr1_3:59268752-59268771 | Msa0129360:intron | 25.0% |
| !!! | ACATTTTAGTATGTCTATTG+AGG | + | chr1_3:59268898-59268917 | Msa0129360:intron | 25.0% |
| ! | TAAAGTTTAATTCAGGCAAT+TGG | - | chr1_3:59268962-59268981 | None:intergenic | 25.0% |
| ! | AAGTCACTAAAGTTTAATTC+AGG | - | chr1_3:59268969-59268988 | None:intergenic | 25.0% |
| ! | TTATTTGTGAATTATGGAAC+AGG | + | chr1_3:59269137-59269156 | Msa0129360:intron | 25.0% |
| !!! | GTTTTTGAGTAAAACAATTG+AGG | - | chr1_3:59269237-59269256 | None:intergenic | 25.0% |
| !!! | ATTGTTTTACTCAAAAACTG+AGG | + | chr1_3:59269239-59269258 | Msa0129360:intron | 25.0% |
| ! | TTCTGATTCTTTATATGCTA+AGG | + | chr1_3:59269268-59269287 | Msa0129360:intron | 25.0% |
| ! | AGCTATATGACATAAAGAAA+GGG | - | chr1_3:59269329-59269348 | None:intergenic | 25.0% |
| ! | TTTATGTAGCAAATTTGTCA+AGG | + | chr1_3:59269645-59269664 | Msa0129360:intron | 25.0% |
| ! | TTATGTAGCAAATTTGTCAA+GGG | + | chr1_3:59269646-59269665 | Msa0129360:intron | 25.0% |
| !! | ACAAATGTTTTCCTTTGAAT+AGG | + | chr1_3:59269752-59269771 | Msa0129360:intron | 25.0% |
| ! | AAAGTTAATGCTACATTACA+TGG | + | chr1_3:59270114-59270133 | Msa0129360:intron | 25.0% |
| ! | AAATTCCAACAGAAAAACAA+AGG | - | chr1_3:59270239-59270258 | None:intergenic | 25.0% |
| ! | TGTTTGTCATCGAAATTTAA+GGG | - | chr1_3:59270439-59270458 | None:intergenic | 25.0% |
| ! | TTAAATTTCGATGACAAACA+GGG | + | chr1_3:59270439-59270458 | Msa0129360:CDS | 25.0% |
| ! | CTATGCAGTTGTTAATTTAA+AGG | + | chr1_3:59270514-59270533 | Msa0129360:intron | 25.0% |
| !! | CATCTAATAAAGTAGCTTTA+TGG | + | chr1_3:59270806-59270825 | Msa0129360:intron | 25.0% |
| ! | TTCTCTCTATCTTATGTATA+TGG | + | chr1_3:59270842-59270861 | Msa0129360:intron | 25.0% |
| ! | TCTCTCTATCTTATGTATAT+GGG | + | chr1_3:59270843-59270862 | Msa0129360:intron | 25.0% |
| ! | GACTGTATTTAATAACCAAA+TGG | + | chr1_3:59270869-59270888 | Msa0129360:intron | 25.0% |
| ! | ATTGAAGCTATTATACCATT+TGG | - | chr1_3:59270887-59270906 | None:intergenic | 25.0% |
| ! | TCTGTTAAGAATTTAGTTGT+CGG | + | chr1_3:59271025-59271044 | Msa0129360:intron | 25.0% |
| !!! | ATTCTTTTTTGAGTCATTAG+AGG | + | chr1_3:59271426-59271445 | Msa0129360:intron | 25.0% |
| ! | AAACAGAATAATAGAGTTTC+TGG | + | chr1_3:59271587-59271606 | Msa0129360:CDS | 25.0% |
| ! | GTTACAGTTAGTGTAAATTT+AGG | + | chr1_3:59271738-59271757 | Msa0129360:three_prime_UTR | 25.0% |
| ! | TTTATTTGTGCATGGTTTAT+TGG | - | chr1_3:59271832-59271851 | None:intergenic | 25.0% |
| ATGAAGGAAGAAAGATATTG+TGG | - | chr1_3:59265316-59265335 | None:intergenic | 30.0% | |
| TCCAATATTTCTTGTAATGC+TGG | + | chr1_3:59265425-59265444 | Msa0129360:intron | 30.0% | |
| TCCAGCATTACAAGAAATAT+TGG | - | chr1_3:59265429-59265448 | None:intergenic | 30.0% | |
| !!! | GTTTGGTTTTAGTGTATGTT+CGG | + | chr1_3:59265625-59265644 | Msa0129360:intron | 30.0% |
| !! | TTCTAGAGTAGAATTCATTC+TGG | - | chr1_3:59265791-59265810 | None:intergenic | 30.0% |
| !!! | TGTTGGTTTTCAATTTTGGA+GGG | - | chr1_3:59265967-59265986 | None:intergenic | 30.0% |
| !!! | ATGTTGGTTTTCAATTTTGG+AGG | - | chr1_3:59265968-59265987 | None:intergenic | 30.0% |
| AGATAACCTATGTGTATTGA+AGG | + | chr1_3:59266051-59266070 | Msa0129360:intron | 30.0% | |
| ! | AGCTGAGATCATTTAAAACA+GGG | - | chr1_3:59266086-59266105 | None:intergenic | 30.0% |
| ! | ATGATCTCAGCTGTTAATTT+TGG | + | chr1_3:59266094-59266113 | Msa0129360:intron | 30.0% |
| ! | TCTCTGCCATTTATTTAGAT+TGG | + | chr1_3:59266162-59266181 | Msa0129360:intron | 30.0% |
| GACTGTCCAATCTAAATAAA+TGG | - | chr1_3:59266171-59266190 | None:intergenic | 30.0% | |
| ATTGAGTGATGTAATTCTGT+AGG | + | chr1_3:59266201-59266220 | Msa0129360:intron | 30.0% | |
| TTAGCAATCAATGATGTTGA+TGG | + | chr1_3:59266226-59266245 | Msa0129360:intron | 30.0% | |
| !!! | TTTTGAAACGTTGCACATTT+TGG | + | chr1_3:59266250-59266269 | Msa0129360:intron | 30.0% |
| CACATGAAGTAGAAGTTATT+AGG | - | chr1_3:59266377-59266396 | None:intergenic | 30.0% | |
| !! | AGAATACTGAAGAAAGTGTT+AGG | - | chr1_3:59266646-59266665 | None:intergenic | 30.0% |
| GAGAAAGAGTCTAATTTAAG+AGG | - | chr1_3:59266673-59266692 | None:intergenic | 30.0% | |
| !!! | GCTTCTGAGTTTTTTGTTTT+TGG | - | chr1_3:59266739-59266758 | None:intergenic | 30.0% |
| !!! | CAAAAAACTCAGAAGCATTT+TGG | + | chr1_3:59266743-59266762 | Msa0129360:intron | 30.0% |
| !!! | AAAAACTCAGAAGCATTTTG+GGG | + | chr1_3:59266745-59266764 | Msa0129360:intron | 30.0% |
| TAATATTAGCGAACATGTGA+AGG | - | chr1_3:59266866-59266885 | None:intergenic | 30.0% | |
| ATTTGCATTCGACTCAAATT+TGG | + | chr1_3:59266911-59266930 | Msa0129360:intron | 30.0% | |
| GTTTAGCACATTGTTAGAAA+GGG | - | chr1_3:59267004-59267023 | None:intergenic | 30.0% | |
| TGTTTAGCACATTGTTAGAA+AGG | - | chr1_3:59267005-59267024 | None:intergenic | 30.0% | |
| !!! | GCTAAACAGTTTTGACTTAT+AGG | + | chr1_3:59267017-59267036 | Msa0129360:intron | 30.0% |
| TTGACTTATAGGCATGAATT+AGG | + | chr1_3:59267028-59267047 | Msa0129360:CDS | 30.0% | |
| ! | GTTGATAAACTGCGTAAAAT+CGG | + | chr1_3:59267211-59267230 | Msa0129360:CDS | 30.0% |
| TAATCATTGAAGAGCTTATC+GGG | + | chr1_3:59267518-59267537 | Msa0129360:intron | 30.0% | |
| ! | CAAAGTAATAGATTTTTGCG+CGG | - | chr1_3:59267574-59267593 | None:intergenic | 30.0% |
| ! | ATTTTACTTCTCACAGCTTA+TGG | + | chr1_3:59267611-59267630 | Msa0129360:intron | 30.0% |
| ! | TTTTACTTCTCACAGCTTAT+GGG | + | chr1_3:59267612-59267631 | Msa0129360:intron | 30.0% |
| ! | AAAAAGTGCATGACATACAA+TGG | - | chr1_3:59267819-59267838 | None:intergenic | 30.0% |
| !!! | CACTTTTTCACATTATATCG+TGG | + | chr1_3:59267831-59267850 | Msa0129360:intron | 30.0% |
| ATTCATTTGATCTACGAAAG+CGG | + | chr1_3:59267871-59267890 | Msa0129360:CDS | 30.0% | |
| AAGGCAATTAATTCTAATGG+AGG | + | chr1_3:59267921-59267940 | Msa0129360:CDS | 30.0% | |
| GTTAATTCTTGGTATACTGA+AGG | + | chr1_3:59268073-59268092 | Msa0129360:intron | 30.0% | |
| ! | TATAATTAACGACGGCTTTT+TGG | - | chr1_3:59268385-59268404 | None:intergenic | 30.0% |
| CCCTAATGTATAATTAACGA+CGG | - | chr1_3:59268393-59268412 | None:intergenic | 30.0% | |
| CCGTCGTTAATTATACATTA+GGG | + | chr1_3:59268390-59268409 | Msa0129360:intron | 30.0% | |
| ! | GGCTTTTATGGTTGTATTTT+AGG | + | chr1_3:59268411-59268430 | Msa0129360:intron | 30.0% |
| !!! | ACAGTTTGTTTTGTTTCAGT+TGG | + | chr1_3:59268785-59268804 | Msa0129360:intron | 30.0% |
| ! | TTCAGTTGGCATATATGTTT+TGG | + | chr1_3:59268799-59268818 | Msa0129360:intron | 30.0% |
| ! | TCAGTTGGCATATATGTTTT+GGG | + | chr1_3:59268800-59268819 | Msa0129360:intron | 30.0% |
| TAGTTGCATCACTATCAAAT+TGG | + | chr1_3:59269083-59269102 | Msa0129360:intron | 30.0% | |
| TCACTATCAAATTGGAAATC+TGG | + | chr1_3:59269091-59269110 | Msa0129360:intron | 30.0% | |
| GAGAAAATCAATCTATCAGT+TGG | - | chr1_3:59269171-59269190 | None:intergenic | 30.0% | |
| GAGCTATATGACATAAAGAA+AGG | - | chr1_3:59269330-59269349 | None:intergenic | 30.0% | |
| TTTGCTCTGCAAGAATAAAA+AGG | - | chr1_3:59269444-59269463 | None:intergenic | 30.0% | |
| ! | TTTTATTCTTGCAGAGCAAA+AGG | + | chr1_3:59269444-59269463 | Msa0129360:intron | 30.0% |
| ! | AACATCTGGACATCTTTTTA+TGG | - | chr1_3:59269582-59269601 | None:intergenic | 30.0% |
| TTTCCTTTGAATAGGAATCA+TGG | + | chr1_3:59269760-59269779 | Msa0129360:intron | 30.0% | |
| GAAATTTCAGGACTTGATAT+TGG | + | chr1_3:59270023-59270042 | Msa0129360:CDS | 30.0% | |
| AAGCAGTTTACTAGTTAATG+GGG | - | chr1_3:59270166-59270185 | None:intergenic | 30.0% | |
| GAAGCAGTTTACTAGTTAAT+GGG | - | chr1_3:59270167-59270186 | None:intergenic | 30.0% | |
| TGAAGCAGTTTACTAGTTAA+TGG | - | chr1_3:59270168-59270187 | None:intergenic | 30.0% | |
| GTATCAGAATATTACGATGA+AGG | - | chr1_3:59270280-59270299 | None:intergenic | 30.0% | |
| CTGTTTGTCATCGAAATTTA+AGG | - | chr1_3:59270440-59270459 | None:intergenic | 30.0% | |
| CTTAAATTTCGATGACAAAC+AGG | + | chr1_3:59270438-59270457 | Msa0129360:CDS | 30.0% | |
| GAGATAGAAAAACAAATCCA+GGG | - | chr1_3:59270717-59270736 | None:intergenic | 30.0% | |
| AGAGATAGAAAAACAAATCC+AGG | - | chr1_3:59270718-59270737 | None:intergenic | 30.0% | |
| !! | TCTGAAATGCAAATTTTGTC+TGG | - | chr1_3:59270951-59270970 | None:intergenic | 30.0% |
| ATTTGCATTTCAGACTGTTA+TGG | + | chr1_3:59270957-59270976 | Msa0129360:intron | 30.0% | |
| GACTGTTATGGAATAATTAC+AGG | + | chr1_3:59270969-59270988 | Msa0129360:intron | 30.0% | |
| GTTATGGAATAATTACAGGA+TGG | + | chr1_3:59270973-59270992 | Msa0129360:intron | 30.0% | |
| ! | TGAAGAAACTTATTTCTCAC+CGG | - | chr1_3:59271094-59271113 | None:intergenic | 30.0% |
| TTCTTCATATTCAATGTACC+AGG | + | chr1_3:59271107-59271126 | Msa0129360:intron | 30.0% | |
| CTTCGATAAAATTGTTGACA+TGG | - | chr1_3:59271218-59271237 | None:intergenic | 30.0% | |
| AAGTTTCAACTACGTAGTTT+AGG | + | chr1_3:59271246-59271265 | Msa0129360:intron | 30.0% | |
| !!! | CACATGTTTTTTTTACCATC+TGG | + | chr1_3:59271389-59271408 | Msa0129360:intron | 30.0% |
| ! | GTTAGTGTAAATTTAGGATG+CGG | + | chr1_3:59271744-59271763 | Msa0129360:three_prime_UTR | 30.0% |
| TGTGCATATTTATTTGTGCA+TGG | - | chr1_3:59271840-59271859 | None:intergenic | 30.0% | |
| ACACTTTAAATGTGGAGAAT+TGG | + | chr1_3:59271894-59271913 | Msa0129360:three_prime_UTR | 30.0% | |
| GGTGAACTGAAACTGAAATT+TGG | + | chr1_3:59265082-59265101 | Msa0129360:five_prime_UTR | 35.0% | |
| TGATAGAGAATAACGAACCT+GGG | - | chr1_3:59265174-59265193 | None:intergenic | 35.0% | |
| ATGATAGAGAATAACGAACC+TGG | - | chr1_3:59265175-59265194 | None:intergenic | 35.0% | |
| TGTGTGGAATTGTAAAACAG+AGG | - | chr1_3:59265264-59265283 | None:intergenic | 35.0% | |
| AAGGAAGAAAGATATTGTGG+TGG | - | chr1_3:59265313-59265332 | None:intergenic | 35.0% | |
| AGAGAAGAAGAAGAAGATGA+AGG | - | chr1_3:59265332-59265351 | None:intergenic | 35.0% | |
| CAAAGATAGATAGCATACCA+GGG | - | chr1_3:59265357-59265376 | None:intergenic | 35.0% | |
| ACAAAGATAGATAGCATACC+AGG | - | chr1_3:59265358-59265377 | None:intergenic | 35.0% | |
| TGAAGTTACCTTAAGTAGCA+TGG | - | chr1_3:59265492-59265511 | None:intergenic | 35.0% | |
| AAAGGCTACTAAGCATATGT+TGG | - | chr1_3:59265984-59266003 | None:intergenic | 35.0% | |
| ! | CAGCTGAGATCATTTAAAAC+AGG | - | chr1_3:59266087-59266106 | None:intergenic | 35.0% |
| AAAGAAAGCTAGCTAGAAGT+AGG | + | chr1_3:59266301-59266320 | Msa0129360:intron | 35.0% | |
| ! | GGGTTCTAATTTCTCTTATG+AGG | - | chr1_3:59266333-59266352 | None:intergenic | 35.0% |
| TTCTACTTCATGTGTTCTCT+GGG | + | chr1_3:59266383-59266402 | Msa0129360:intron | 35.0% | |
| ! | TGATTGACATTTTCTTGTGC+AGG | + | chr1_3:59266411-59266430 | Msa0129360:intron | 35.0% |
| TAATAACATGACAGAAGCCA+TGG | + | chr1_3:59266510-59266529 | Msa0129360:CDS | 35.0% | |
| AATAACATGACAGAAGCCAT+GGG | + | chr1_3:59266511-59266530 | Msa0129360:CDS | 35.0% | |
| CTCAAATTTGGACTAACTGA+TGG | + | chr1_3:59266923-59266942 | Msa0129360:intron | 35.0% | |
| TGAAACAAAAAGAAACCTGC+AGG | - | chr1_3:59267099-59267118 | None:intergenic | 35.0% | |
| TTGAATGTCATTGCATGTGT+TGG | - | chr1_3:59267422-59267441 | None:intergenic | 35.0% | |
| TTATCGGGTTTAGATTGACT+AGG | + | chr1_3:59267533-59267552 | Msa0129360:intron | 35.0% | |
| AATCAGAAACTGTCTATGCA+AGG | - | chr1_3:59267667-59267686 | None:intergenic | 35.0% | |
| AGTTTCTGATTTCGTAGTAC+CGG | + | chr1_3:59267676-59267695 | Msa0129360:intron | 35.0% | |
| ATTATATCGTGGATGTTGCA+GGG | + | chr1_3:59267842-59267861 | Msa0129360:intron | 35.0% | |
| ACATATATACATTGCACTGC+TGG | + | chr1_3:59267948-59267967 | Msa0129360:CDS | 35.0% | |
| ATTATAGCACACAATAGCAG+TGG | + | chr1_3:59268291-59268310 | Msa0129360:intron | 35.0% | |
| GCCGTCGTTAATTATACATT+AGG | + | chr1_3:59268389-59268408 | Msa0129360:intron | 35.0% | |
| AACTCAAAGTTTGAGCTTTG+TGG | + | chr1_3:59268579-59268598 | Msa0129360:intron | 35.0% | |
| !!! | GGTTACAAAGTTTTCTAGCT+AGG | + | chr1_3:59268713-59268732 | Msa0129360:intron | 35.0% |
| CAAAACAAACTGTTAGACAG+TGG | - | chr1_3:59268778-59268797 | None:intergenic | 35.0% | |
| !!! | GCATATATGTTTTGGGTTCA+GGG | + | chr1_3:59268807-59268826 | Msa0129360:CDS | 35.0% |
| TCAGGGTTATAAACTCAATG+AGG | + | chr1_3:59268824-59268843 | Msa0129360:CDS | 35.0% | |
| TGCAACTATCAATGCTACAA+CGG | + | chr1_3:59269057-59269076 | Msa0129360:intron | 35.0% | |
| !!! | CAGTTTCTTTTGCTATTGGA+GGG | + | chr1_3:59269385-59269404 | Msa0129360:intron | 35.0% |
| TATACTGTGACTTCTAATGC+TGG | + | chr1_3:59269553-59269572 | Msa0129360:intron | 35.0% | |
| TAAATGCCATGCAATATCTC+AGG | - | chr1_3:59269786-59269805 | None:intergenic | 35.0% | |
| CTTTGGTACTTAAAGCTTAC+AGG | + | chr1_3:59269945-59269964 | Msa0129360:intron | 35.0% | |
| TTTCAGGACTTGATATTGGA+TGG | + | chr1_3:59270027-59270046 | Msa0129360:CDS | 35.0% | |
| TTCAGGACTTGATATTGGAT+GGG | + | chr1_3:59270028-59270047 | Msa0129360:CDS | 35.0% | |
| TTACTAGTTAATGGGGATGA+TGG | - | chr1_3:59270159-59270178 | None:intergenic | 35.0% | |
| !! | TTTTGGAAATGTCCACATGT+AGG | + | chr1_3:59270213-59270232 | Msa0129360:intron | 35.0% |
| TAGAAAAACAAATCCAGGGA+GGG | - | chr1_3:59270713-59270732 | None:intergenic | 35.0% | |
| ATAGAAAAACAAATCCAGGG+AGG | - | chr1_3:59270714-59270733 | None:intergenic | 35.0% | |
| TCATATTCAATGTACCAGGA+AGG | + | chr1_3:59271111-59271130 | Msa0129360:intron | 35.0% | |
| CATATTCAATGTACCAGGAA+GGG | + | chr1_3:59271112-59271131 | Msa0129360:intron | 35.0% | |
| GAGTACAAGTACATTGTTGA+TGG | + | chr1_3:59271141-59271160 | Msa0129360:CDS | 35.0% | |
| ! | AGTACATTGTTGATGGAGAA+TGG | + | chr1_3:59271148-59271167 | Msa0129360:CDS | 35.0% |
| TTGACATGGCCATCTTTATT+GGG | - | chr1_3:59271204-59271223 | None:intergenic | 35.0% | |
| ATATGCTGTGGTACATTGTA+TGG | - | chr1_3:59271302-59271321 | None:intergenic | 35.0% | |
| AATGTGAGCAATATATGCTG+TGG | - | chr1_3:59271314-59271333 | None:intergenic | 35.0% | |
| GTAATAAAAATCCCTCCCTA+TGG | - | chr1_3:59271368-59271387 | None:intergenic | 35.0% | |
| ! | TTCAAAGAGCATGAGATATG+TGG | - | chr1_3:59271481-59271500 | None:intergenic | 35.0% |
| ATATCTCATGCTCTTTGAAC+AGG | + | chr1_3:59271482-59271501 | Msa0129360:intron | 35.0% | |
| CAAATGTCTGTATCATAGTG+CGG | + | chr1_3:59271858-59271877 | Msa0129360:three_prime_UTR | 35.0% | |
| AGATTCGCACACTTTAAATG+TGG | + | chr1_3:59271886-59271905 | Msa0129360:three_prime_UTR | 35.0% | |
| !! | ACATTGATTTGCAGATGTCT+GGG | - | chr1_3:59271937-59271956 | None:intergenic | 35.0% |
| !! | AACATTGATTTGCAGATGTC+TGG | - | chr1_3:59271938-59271957 | None:intergenic | 35.0% |
| TAACTGTCTTGTGTTGTGTG+GGG | - | chr1_3:59265058-59265077 | None:intergenic | 40.0% | |
| GTAACTGTCTTGTGTTGTGT+GGG | - | chr1_3:59265059-59265078 | None:intergenic | 40.0% | |
| TGTAACTGTCTTGTGTTGTG+TGG | - | chr1_3:59265060-59265079 | None:intergenic | 40.0% | |
| ACAACACAAGACAGTTACAC+AGG | + | chr1_3:59265061-59265080 | Msa0129360:five_prime_UTR | 40.0% | |
| TTCAGAATCTGAATCTTCCC+AGG | + | chr1_3:59265154-59265173 | Msa0129360:CDS | 40.0% | |
| GTGGAATTGTAAAACAGAGG+AGG | - | chr1_3:59265261-59265280 | None:intergenic | 40.0% | |
| TTCTTCTTCTTCTCTATCCC+TGG | + | chr1_3:59265337-59265356 | Msa0129360:CDS | 40.0% | |
| TTGTAATGCTGGACATACAC+AGG | + | chr1_3:59265436-59265455 | Msa0129360:intron | 40.0% | |
| TGTAATGCTGGACATACACA+GGG | + | chr1_3:59265437-59265456 | Msa0129360:intron | 40.0% | |
| ! | CATTCCAACCATGCTACTTA+AGG | + | chr1_3:59265481-59265500 | Msa0129360:CDS | 40.0% |
| GTTACCTTAAGTAGCATGGT+TGG | - | chr1_3:59265488-59265507 | None:intergenic | 40.0% | |
| AAGAGGTTACTTGAACGAAC+AGG | - | chr1_3:59265583-59265602 | None:intergenic | 40.0% | |
| TCGGATCCTTCAATACACAT+AGG | - | chr1_3:59266060-59266079 | None:intergenic | 40.0% | |
| !! | CATTTTGGTGTATGCTAGAG+AGG | + | chr1_3:59266265-59266284 | Msa0129360:intron | 40.0% |
| CTTCTACTTCATGTGTTCTC+TGG | + | chr1_3:59266382-59266401 | Msa0129360:intron | 40.0% | |
| TCTACTTCATGTGTTCTCTG+GGG | + | chr1_3:59266384-59266403 | Msa0129360:intron | 40.0% | |
| ATTAAACATACCAGCACCCA+TGG | - | chr1_3:59266530-59266549 | None:intergenic | 40.0% | |
| GAACTACAACTTCATCCTTC+CGG | + | chr1_3:59267054-59267073 | Msa0129360:CDS | 40.0% | |
| CATGATCCAACAATCAAGTC+CGG | - | chr1_3:59267076-59267095 | None:intergenic | 40.0% | |
| TGTGACAGAACTGAATCATC+AGG | - | chr1_3:59267132-59267151 | None:intergenic | 40.0% | |
| CAGTTCTGTCACATATAGTC+TGG | + | chr1_3:59267139-59267158 | Msa0129360:intron | 40.0% | |
| ! | TGTGTTGGCATATTCTCGTA+TGG | - | chr1_3:59267407-59267426 | None:intergenic | 40.0% |
| TGCTGAGATAAGGTTCGTAA+TGG | + | chr1_3:59267450-59267469 | Msa0129360:intron | 40.0% | |
| ! | TCTCACAGCTTATGGGTTTT+TGG | + | chr1_3:59267619-59267638 | Msa0129360:intron | 40.0% |
| ! | CTCACAGCTTATGGGTTTTT+GGG | + | chr1_3:59267620-59267639 | Msa0129360:intron | 40.0% |
| ! | TGACTGAAGTTTTACCCATC+CGG | - | chr1_3:59267698-59267717 | None:intergenic | 40.0% |
| TGCATGACATACAATGGCAT+CGG | - | chr1_3:59267813-59267832 | None:intergenic | 40.0% | |
| CATTATATCGTGGATGTTGC+AGG | + | chr1_3:59267841-59267860 | Msa0129360:intron | 40.0% | |
| ! | GGACTGATGCTGAATGTTTT+CGG | + | chr1_3:59268131-59268150 | Msa0129360:intron | 40.0% |
| ! | ATGTTTTCGGTGATCTCTCA+TGG | + | chr1_3:59268144-59268163 | Msa0129360:intron | 40.0% |
| AGCAGCAGAGGATACTTTAA+CGG | - | chr1_3:59268338-59268357 | None:intergenic | 40.0% | |
| ! | GGAGATTTAGAGCTTGTTTC+TGG | + | chr1_3:59268464-59268483 | Msa0129360:intron | 40.0% |
| !! | CTTGTTTCTGGATCTTGTGT+TGG | + | chr1_3:59268476-59268495 | Msa0129360:intron | 40.0% |
| ATAGAGTTCCACGAGTTAGT+TGG | + | chr1_3:59268641-59268660 | Msa0129360:intron | 40.0% | |
| TAGAGTTCCACGAGTTAGTT+GGG | + | chr1_3:59268642-59268661 | Msa0129360:intron | 40.0% | |
| !!! | GGCATATATGTTTTGGGTTC+AGG | + | chr1_3:59268806-59268825 | Msa0129360:CDS | 40.0% |
| TGAGGCTAATACACTACTTC+TGG | + | chr1_3:59268842-59268861 | Msa0129360:CDS | 40.0% | |
| AGTATGTCTATTGAGGTTCG+TGG | + | chr1_3:59268905-59268924 | Msa0129360:intron | 40.0% | |
| !! | TGGCCAGTTTCTTTTGCTAT+TGG | + | chr1_3:59269381-59269400 | Msa0129360:intron | 40.0% |
| CCTCCAATAGCAAAAGAAAC+TGG | - | chr1_3:59269387-59269406 | None:intergenic | 40.0% | |
| !!! | CCAGTTTCTTTTGCTATTGG+AGG | + | chr1_3:59269384-59269403 | Msa0129360:intron | 40.0% |
| ! | CTTTTTATGGCATCCAGCTT+TGG | - | chr1_3:59269479-59269498 | None:intergenic | 40.0% |
| !! | ATCGGCTGTTGCACTTTTTA+TGG | - | chr1_3:59269492-59269511 | None:intergenic | 40.0% |
| AAGAGATTGTCTGCAACATC+TGG | - | chr1_3:59269596-59269615 | None:intergenic | 40.0% | |
| CCTACGCAATAGATGATTCT+AGG | - | chr1_3:59269673-59269692 | None:intergenic | 40.0% | |
| CCTAGAATCATCTATTGCGT+AGG | + | chr1_3:59269670-59269689 | Msa0129360:intron | 40.0% | |
| AGGCCATGATTCCTATTCAA+AGG | - | chr1_3:59269766-59269785 | None:intergenic | 40.0% | |
| AAGTGACAGGCTTCTTACTA+GGG | - | chr1_3:59269971-59269990 | None:intergenic | 40.0% | |
| AAAGTGACAGGCTTCTTACT+AGG | - | chr1_3:59269972-59269991 | None:intergenic | 40.0% | |
| TCAGGACTTGATATTGGATG+GGG | + | chr1_3:59270029-59270048 | Msa0129360:CDS | 40.0% | |
| GAAAAACAAAGGCCTACATG+TGG | - | chr1_3:59270228-59270247 | None:intergenic | 40.0% | |
| !!! | GTAGGCCTTTGTTTTTCTGT+TGG | + | chr1_3:59270231-59270250 | Msa0129360:intron | 40.0% |
| !! | TTAAGGGCACTCTCTGAAAA+GGG | - | chr1_3:59270423-59270442 | None:intergenic | 40.0% |
| !! | TTTAAGGGCACTCTCTGAAA+AGG | - | chr1_3:59270424-59270443 | None:intergenic | 40.0% |
| GTAACCTCTCCCAATAAAGA+TGG | + | chr1_3:59271192-59271211 | Msa0129360:CDS | 40.0% | |
| GTTGACATGGCCATCTTTAT+TGG | - | chr1_3:59271205-59271224 | None:intergenic | 40.0% | |
| ATCTACTAAAGCCTCACCAT+AGG | + | chr1_3:59271349-59271368 | Msa0129360:intron | 40.0% | |
| TCTACTAAAGCCTCACCATA+GGG | + | chr1_3:59271350-59271369 | Msa0129360:intron | 40.0% | |
| TAACAGACACAAACTCCAGA+TGG | - | chr1_3:59271407-59271426 | None:intergenic | 40.0% | |
| ATGGTTCAGAGATCCTCATT+GGG | - | chr1_3:59271621-59271640 | None:intergenic | 40.0% | |
| TCAACAAGCAAGTGCATTGA+TGG | - | chr1_3:59271640-59271659 | None:intergenic | 40.0% | |
| CTGTAACAGAGAGCTTAGTA+AGG | - | chr1_3:59271725-59271744 | None:intergenic | 40.0% | |
| TGTGGAGAATTGGAGAATCA+TGG | + | chr1_3:59271904-59271923 | Msa0129360:three_prime_UTR | 40.0% | |
| GTGGAGAATTGGAGAATCAT+GGG | + | chr1_3:59271905-59271924 | Msa0129360:three_prime_UTR | 40.0% | |
| GAATCAGCACTAAGCAGCAA+TGG | - | chr1_3:59265216-59265235 | None:intergenic | 45.0% | |
| ATCCTTCCGGACTTGATTGT+TGG | + | chr1_3:59267067-59267086 | Msa0129360:CDS | 45.0% | |
| ATCCAACAATCAAGTCCGGA+AGG | - | chr1_3:59267072-59267091 | None:intergenic | 45.0% | |
| TATCAACGTCTTCAGGAGTC+TGG | - | chr1_3:59267198-59267217 | None:intergenic | 45.0% | |
| CGCAGTTTATCAACGTCTTC+AGG | - | chr1_3:59267205-59267224 | None:intergenic | 45.0% | |
| AACACTTGCGTGCTGAGATA+AGG | + | chr1_3:59267440-59267459 | Msa0129360:intron | 45.0% | |
| ! | TCTGATTTCGTAGTACCGGA+TGG | + | chr1_3:59267680-59267699 | Msa0129360:intron | 45.0% |
| ! | CTGATTTCGTAGTACCGGAT+GGG | + | chr1_3:59267681-59267700 | Msa0129360:intron | 45.0% |
| ATACATTGCACTGCTGGACT+TGG | + | chr1_3:59267954-59267973 | Msa0129360:CDS | 45.0% | |
| ATTCCCGCTACACTGAAACA+CGG | - | chr1_3:59268361-59268380 | None:intergenic | 45.0% | |
| AACTGTTAGACAGTGGCCAA+TGG | - | chr1_3:59268771-59268790 | None:intergenic | 45.0% | |
| TCATGGCCTGAGATATTGCA+TGG | + | chr1_3:59269777-59269796 | Msa0129360:intron | 45.0% | |
| TTTCCACCGTAGAGCAATTG+CGG | - | chr1_3:59270007-59270026 | None:intergenic | 45.0% | |
| TGCTCTACGGTGGAAATTTC+AGG | + | chr1_3:59270011-59270030 | Msa0129360:CDS | 45.0% | |
| CAGGACTTGATATTGGATGG+GGG | + | chr1_3:59270030-59270049 | Msa0129360:CDS | 45.0% | |
| TCGATGACAAACAGGGTTCA+TGG | + | chr1_3:59270446-59270465 | Msa0129360:CDS | 45.0% | |
| GGGTTCATGGTTTCTCAAGA+AGG | + | chr1_3:59270459-59270478 | Msa0129360:CDS | 45.0% | |
| AACAAATCCAGGGAGGGAAA+AGG | - | chr1_3:59270707-59270726 | None:intergenic | 45.0% | |
| ATGGCCATCTTTATTGGGAG+AGG | - | chr1_3:59271199-59271218 | None:intergenic | 45.0% | |
| AAAAATCCCTCCCTATGGTG+AGG | - | chr1_3:59271363-59271382 | None:intergenic | 45.0% | |
| !! | TGAACAGGTCCTTGATGATG+CGG | + | chr1_3:59271497-59271516 | Msa0129360:intron | 45.0% |
| TGATGATCCTGATCTCACGA+AGG | + | chr1_3:59271557-59271576 | Msa0129360:CDS | 45.0% | |
| GATGGTTCAGAGATCCTCAT+TGG | - | chr1_3:59271622-59271641 | None:intergenic | 45.0% | |
| ATGTCTGTATCATAGTGCGG+TGG | + | chr1_3:59271861-59271880 | Msa0129360:three_prime_UTR | 45.0% | |
| !! | TTATATATAAATAATATGTT+TGG | + | chr1_3:59265608-59265627 | Msa0129360:intron | 5.0% |
| ! | AAGATATTGTGGTGGCGAGC+AGG | - | chr1_3:59265305-59265324 | None:intergenic | 50.0% |
| TTTCTTGTGCAGGCTGCTTC+TGG | + | chr1_3:59266421-59266440 | Msa0129360:intron | 50.0% | |
| GAGCTACTTGTCTCTGCACT+CGG | - | chr1_3:59266454-59266473 | None:intergenic | 50.0% | |
| !! | GACAAGTAGCTCTGATGTCG+AGG | + | chr1_3:59266462-59266481 | Msa0129360:CDS | 50.0% |
| !! | AAGTAGCTCTGATGTCGAGG+AGG | + | chr1_3:59266465-59266484 | Msa0129360:CDS | 50.0% |
| GATTGTTGGATCATGCCTGC+AGG | + | chr1_3:59267081-59267100 | Msa0129360:CDS | 50.0% | |
| TGATCTACGAAAGCGGCTTC+CGG | + | chr1_3:59267878-59267897 | Msa0129360:CDS | 50.0% | |
| AAGAGACATACCGCAACAGC+TGG | - | chr1_3:59267987-59268006 | None:intergenic | 50.0% | |
| AGCTGTTGCGGTATGTCTCT+TGG | + | chr1_3:59267986-59268005 | Msa0129360:intron | 50.0% | |
| CGGTGATCTCTCATGGTGAA+TGG | + | chr1_3:59268151-59268170 | Msa0129360:intron | 50.0% | |
| AGCACACAATAGCAGTGGAG+AGG | + | chr1_3:59268296-59268315 | Msa0129360:intron | 50.0% | |
| ACACAATAGCAGTGGAGAGG+AGG | + | chr1_3:59268299-59268318 | Msa0129360:intron | 50.0% | |
| CACAATAGCAGTGGAGAGGA+GGG | + | chr1_3:59268300-59268319 | Msa0129360:intron | 50.0% | |
| TGCTCCGTGTTTCAGTGTAG+CGG | + | chr1_3:59268354-59268373 | Msa0129360:intron | 50.0% | |
| GTTCCACGAGTTAGTTGGGT+CGG | + | chr1_3:59268646-59268665 | Msa0129360:intron | 50.0% | |
| AATCCGACCCAACTAACTCG+TGG | - | chr1_3:59268652-59268671 | None:intergenic | 50.0% | |
| AACTTTGTAACCACGACGCG+TGG | - | chr1_3:59268705-59268724 | None:intergenic | 50.0% | |
| AAGGTCATGCTGTCCAAAGC+TGG | + | chr1_3:59269463-59269482 | Msa0129360:CDS | 50.0% | |
| !! | AGAAGCCTGTCACTTTGTCG+TGG | + | chr1_3:59269976-59269995 | Msa0129360:CDS | 50.0% |
| !! | GAAGCCTGTCACTTTGTCGT+GGG | + | chr1_3:59269977-59269996 | Msa0129360:CDS | 50.0% |
| !! | AAGCCTGTCACTTTGTCGTG+GGG | + | chr1_3:59269978-59269997 | Msa0129360:CDS | 50.0% |
| ACTTGATATTGGATGGGGGC+AGG | + | chr1_3:59270034-59270053 | Msa0129360:CDS | 50.0% | |
| ACTAAAGCCTCACCATAGGG+AGG | + | chr1_3:59271353-59271372 | Msa0129360:intron | 50.0% | |
| CTAAAGCCTCACCATAGGGA+GGG | + | chr1_3:59271354-59271373 | Msa0129360:intron | 50.0% | |
| CGTTCATCCTTCGTGAGATC+AGG | - | chr1_3:59271567-59271586 | None:intergenic | 50.0% | |
| TCTGGAAGCTCTTCCCAATG+AGG | + | chr1_3:59271605-59271624 | Msa0129360:CDS | 50.0% | |
| TCTTGTGTTGTGTGGGGCAG+CGG | - | chr1_3:59265052-59265071 | None:intergenic | 55.0% | |
| GAGGAGGAGCAGATAGTGTG+TGG | - | chr1_3:59265280-59265299 | None:intergenic | 55.0% | |
| !! | TAGCTCTGATGTCGAGGAGG+AGG | + | chr1_3:59266468-59266487 | Msa0129360:CDS | 55.0% |
| ATGACAGAAGCCATGGGTGC+TGG | + | chr1_3:59266517-59266536 | Msa0129360:CDS | 55.0% | |
| CAACGTCTTCAGGAGTCTGG+TGG | - | chr1_3:59267195-59267214 | None:intergenic | 55.0% | |
| TGGAAGAGCTCCAGCTGTTG+CGG | + | chr1_3:59267974-59267993 | Msa0129360:CDS | 55.0% | |
| ACTGAAACACGGAGCAGCAG+AGG | - | chr1_3:59268350-59268369 | None:intergenic | 55.0% | |
| GCTCCGTGTTTCAGTGTAGC+GGG | + | chr1_3:59268355-59268374 | Msa0129360:intron | 55.0% | |
| TGTCCCCACGACAAAGTGAC+AGG | - | chr1_3:59269984-59270003 | None:intergenic | 55.0% | |
| GGGACACCGCAATTGCTCTA+CGG | + | chr1_3:59269998-59270017 | Msa0129360:CDS | 55.0% | |
| ACACCGCAATTGCTCTACGG+TGG | + | chr1_3:59270001-59270020 | Msa0129360:CDS | 55.0% | |
| ! | TTCGCTTCCTTTTCCCTCCC+TGG | + | chr1_3:59270697-59270716 | Msa0129360:intron | 55.0% |
| !! | GTCCTTGATGATGCGGACAG+TGG | + | chr1_3:59271504-59271523 | Msa0129360:CDS | 55.0% |
| ACCAGTCACTCTCTCCCGAA+GGG | - | chr1_3:59271538-59271557 | None:intergenic | 55.0% | |
| ! | TTGTGGTGGCGAGCAGGAAG+AGG | - | chr1_3:59265299-59265318 | None:intergenic | 60.0% |
| TGTACTCGTAGCGCCCTTCC+TGG | - | chr1_3:59271128-59271147 | None:intergenic | 60.0% | |
| GGCCACTGTCCGCATCATCA+AGG | - | chr1_3:59271509-59271528 | None:intergenic | 60.0% | |
| AGTCACTCTCTCCCGAAGGG+AGG | - | chr1_3:59271535-59271554 | None:intergenic | 60.0% | |
| TCCCTTCGGGAGAGAGTGAC+TGG | + | chr1_3:59271534-59271553 | Msa0129360:CDS | 60.0% | |
| CACCAGTCACTCTCTCCCGA+AGG | - | chr1_3:59271539-59271558 | None:intergenic | 60.0% | |
| TGTGTGGGGCAGCGGTCACA+AGG | - | chr1_3:59265044-59265063 | None:intergenic | 65.0% | |
| ! | TGGTGGCGAGCAGGAAGAGG+AGG | - | chr1_3:59265296-59265315 | None:intergenic | 65.0% |
| CAGTGGAGAGGAGGGAGCTG+AGG | + | chr1_3:59268308-59268327 | Msa0129360:intron | 65.0% | |
| GGAGAGGAGGGAGCTGAGGA+TGG | + | chr1_3:59268312-59268331 | Msa0129360:intron | 65.0% | |
| ACAGTGGCCGTGCCTCCCTT+CGG | + | chr1_3:59271520-59271539 | Msa0129360:CDS | 65.0% | |
| CTCTCTCCCGAAGGGAGGCA+CGG | - | chr1_3:59271530-59271549 | None:intergenic | 65.0% | |
| CGCACGCATACCACGCGTCG+TGG | + | chr1_3:59268692-59268711 | Msa0129360:intron | 70.0% | |
| CAGTGGCCGTGCCTCCCTTC+GGG | + | chr1_3:59271521-59271540 | Msa0129360:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 59265038 | 59271959 | 59265038 | ID=Msa0129360;Name=Msa0129360 |
| chr1_3 | mRNA | 59265038 | 59271959 | 59265038 | ID=Msa0129360-mRNA-1;Parent=Msa0129360;Name=Msa0129360-mRNA-1;_AED=0.13;_eAED=0.13;_QI=106|0.91|1|1|1|1|13|324|361 |
| chr1_3 | exon | 59265038 | 59265175 | 59265038 | ID=Msa0129360-mRNA-1:exon:19232;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59265256 | 59265358 | 59265256 | ID=Msa0129360-mRNA-1:exon:19233;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59265458 | 59265502 | 59265458 | ID=Msa0129360-mRNA-1:exon:19234;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59266433 | 59266538 | 59266433 | ID=Msa0129360-mRNA-1:exon:19235;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59267026 | 59267102 | 59267026 | ID=Msa0129360-mRNA-1:exon:19236;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59267199 | 59267275 | 59267199 | ID=Msa0129360-mRNA-1:exon:19237;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59267863 | 59267995 | 59267863 | ID=Msa0129360-mRNA-1:exon:19238;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59268804 | 59268863 | 59268804 | ID=Msa0129360-mRNA-1:exon:19239;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59269458 | 59269514 | 59269458 | ID=Msa0129360-mRNA-1:exon:19240;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59269960 | 59270055 | 59269960 | ID=Msa0129360-mRNA-1:exon:19241;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59270430 | 59270489 | 59270430 | ID=Msa0129360-mRNA-1:exon:19242;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59271129 | 59271236 | 59271129 | ID=Msa0129360-mRNA-1:exon:19243;Parent=Msa0129360-mRNA-1 |
| chr1_3 | exon | 59271504 | 59271959 | 59271504 | ID=Msa0129360-mRNA-1:exon:19244;Parent=Msa0129360-mRNA-1 |
| chr1_3 | five_prime_UTR | 59265038 | 59265143 | 59265038 | ID=Msa0129360-mRNA-1:five_prime_utr;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59265144 | 59265175 | 59265144 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59265256 | 59265358 | 59265256 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59265458 | 59265502 | 59265458 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59266433 | 59266538 | 59266433 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59267026 | 59267102 | 59267026 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59267199 | 59267275 | 59267199 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59267863 | 59267995 | 59267863 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59268804 | 59268863 | 59268804 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59269458 | 59269514 | 59269458 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59269960 | 59270055 | 59269960 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59270430 | 59270489 | 59270430 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59271129 | 59271236 | 59271129 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | CDS | 59271504 | 59271635 | 59271504 | ID=Msa0129360-mRNA-1:cds;Parent=Msa0129360-mRNA-1 |
| chr1_3 | three_prime_UTR | 59271636 | 59271959 | 59271636 | ID=Msa0129360-mRNA-1:three_prime_utr;Parent=Msa0129360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
