AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0202040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0202040 MtrunA17_Chr2g0298861 88.364 550 34 1 6 525 72 621 0.0 971
Msa0202040 MtrunA17_Chr7g0223721 74.364 550 105 3 6 525 66 609 0.0 809
Msa0202040 MtrunA17_Chr4g0040931 74.860 537 104 2 19 525 74 609 0.0 796
Msa0202040 MtrunA17_Chr2g0298851 70.950 537 125 2 19 525 74 609 0.0 776
Msa0202040 MtrunA17_Chr7g0223851 69.145 538 135 2 19 526 83 619 0.0 738
Msa0202040 MtrunA17_Chr5g0427901 67.642 547 134 4 19 524 74 618 0.0 730
Msa0202040 MtrunA17_Chr2g0293581 67.225 537 144 3 19 524 75 610 0.0 728
Msa0202040 MtrunA17_Chr4g0012541 68.053 529 138 2 28 526 74 601 0.0 724
Msa0202040 MtrunA17_Chr7g0225671 68.030 538 140 3 19 526 81 616 0.0 724
Msa0202040 MtrunA17_Chr7g0233311 67.472 538 143 3 19 525 74 610 0.0 720
Msa0202040 MtrunA17_Chr7g0223801 65.930 543 149 6 19 529 74 612 0.0 701
Msa0202040 MtrunA17_Chr2g0287631 67.286 538 144 3 19 525 74 610 0.0 698
Msa0202040 MtrunA17_Chr7g0221661 65.736 537 152 3 19 525 74 608 0.0 695
Msa0202040 MtrunA17_Chr7g0223821 66.728 541 144 5 19 525 74 612 0.0 692
Msa0202040 MtrunA17_Chr7g0223821 48.000 100 41 2 434 522 596 695 2.04e-14 76.6
Msa0202040 MtrunA17_Chr7g0228281 68.039 510 143 6 19 526 135 626 0.0 678
Msa0202040 MtrunA17_Chr8g0390821 65.242 538 130 5 28 524 124 645 0.0 665
Msa0202040 MtrunA17_Chr7g0217971 64.717 530 130 5 19 518 74 576 0.0 665
Msa0202040 MtrunA17_Chr7g0223831 62.430 535 142 3 19 523 74 579 0.0 652
Msa0202040 MtrunA17_Chr7g0233301 61.525 551 144 4 6 525 66 579 0.0 652
Msa0202040 MtrunA17_Chr7g0215261 64.054 523 148 6 19 523 74 574 0.0 650
Msa0202040 MtrunA17_Chr7g0223181 60.482 539 179 5 19 525 72 608 0.0 631
Msa0202040 MtrunA17_Chr7g0223711 59.590 537 183 5 19 524 74 607 0.0 630
Msa0202040 MtrunA17_Chr7g0223781 61.942 515 163 3 19 503 74 585 0.0 628
Msa0202040 MtrunA17_Chr4g0031321 60.521 537 178 5 19 523 72 606 0.0 628
Msa0202040 MtrunA17_Chr4g0031301 60.521 537 178 5 19 523 72 606 0.0 628
Msa0202040 MtrunA17_Chr7g0223291 59.740 539 183 5 19 525 72 608 0.0 626
Msa0202040 MtrunA17_Chr7g0262821 59.777 537 182 5 19 523 72 606 0.0 622
Msa0202040 MtrunA17_Chr7g0223731 59.252 535 185 4 19 523 74 605 0.0 622
Msa0202040 MtrunA17_Chr7g0223681 60.501 519 172 4 36 524 2 517 0.0 618
Msa0202040 MtrunA17_Chr7g0223031 58.059 546 196 4 19 534 74 616 0.0 616
Msa0202040 MtrunA17_Chr7g0223541 57.934 542 194 5 15 525 27 565 0.0 615
Msa0202040 MtrunA17_Chr8g0350731 58.955 536 187 4 19 524 102 634 0.0 615
Msa0202040 MtrunA17_Chr4g0073741 58.845 537 187 5 19 523 71 605 0.0 614
Msa0202040 MtrunA17_Chr2g0296391 66.447 456 121 3 19 443 74 528 0.0 613
Msa0202040 MtrunA17_Chr7g0248151 58.101 537 191 5 19 523 74 608 0.0 609
Msa0202040 MtrunA17_Chr7g0223741 60.853 516 169 4 19 503 74 587 0.0 608
Msa0202040 MtrunA17_Chr7g0223751 58.131 535 191 4 19 523 74 605 0.0 608
Msa0202040 MtrunA17_Chr7g0248131 58.256 539 190 6 18 523 74 610 0.0 605
Msa0202040 MtrunA17_Chr7g0223621 57.248 545 198 5 19 531 74 615 0.0 602
Msa0202040 MtrunA17_Chr7g0223701 56.985 544 194 6 19 524 74 615 0.0 592
Msa0202040 MtrunA17_Chr7g0223631 58.396 536 176 6 19 524 74 592 0.0 580
Msa0202040 MtrunA17_Chr1g0166551 58.285 513 96 5 44 525 69 494 0.0 541
Msa0202040 MtrunA17_Chr2g0293601 63.229 446 98 4 19 433 74 484 0.0 538
Msa0202040 MtrunA17_Chr2g0331381 58.526 475 104 6 19 463 71 482 6.47e-180 517
Msa0202040 MtrunA17_Chr6g0462681 50.980 510 216 5 19 496 72 579 1.82e-168 494
Msa0202040 MtrunA17_Chr6g0462601 51.765 510 212 5 19 496 72 579 2.93e-168 493
Msa0202040 MtrunA17_Chr6g0462611 50.295 509 219 5 19 496 22 527 1.08e-166 488
Msa0202040 MtrunA17_Chr2g0284681 52.621 496 196 6 19 476 71 565 8.50e-164 480
Msa0202040 MtrunA17_Chr6g0462711 49.714 525 225 6 19 506 74 596 3.59e-161 476
Msa0202040 MtrunA17_Chr8g0388761 47.801 523 234 8 19 507 101 618 1.24e-159 472
Msa0202040 MtrunA17_Chr8g0388671 47.992 523 233 8 19 507 101 618 8.36e-159 469
Msa0202040 MtrunA17_Chr6g0462641 49.320 515 220 7 19 495 72 583 2.71e-154 458
Msa0202040 MtrunA17_Chr6g0462771 49.027 514 223 6 19 495 72 583 6.21e-152 451
Msa0202040 MtrunA17_Chr2g0293561 69.767 301 61 1 19 289 74 374 1.50e-150 439
Msa0202040 MtrunA17_Chr7g0223761 62.534 371 65 5 186 525 3 330 1.20e-141 414
Msa0202040 MtrunA17_Chr2g0293271 59.384 357 94 5 19 370 96 406 1.39e-133 396
Msa0202040 MtrunA17_Chr2g0299821 48.444 450 178 10 19 453 72 482 3.34e-126 380
Msa0202040 MtrunA17_Chr2g0279901 42.481 532 246 13 3 497 107 615 4.24e-120 370
Msa0202040 MtrunA17_Chr1g0151991 73.478 230 56 1 7 236 67 291 1.30e-119 355
Msa0202040 MtrunA17_Chr2g0299921 59.357 342 106 3 19 329 1092 1431 1.49e-118 386
Msa0202040 MtrunA17_Chr2g0299921 61.006 318 91 3 19 305 1476 1791 1.02e-107 355
Msa0202040 MtrunA17_Chr1g0152001 64.855 276 93 4 266 540 37 309 1.27e-115 347
Msa0202040 MtrunA17_Chr2g0299791 60.443 316 93 2 19 304 1105 1418 1.60e-115 374
Msa0202040 MtrunA17_Chr4g0049501 41.155 537 256 14 20 519 118 631 1.89e-115 358
Msa0202040 MtrunA17_Chr6g0462861 40.531 565 282 12 19 541 63 615 3.28e-114 354
Msa0202040 MtrunA17_Chr7g0245531 59.150 306 93 3 250 525 2 305 1.41e-112 338
Msa0202040 MtrunA17_Chr2g0299851 57.057 333 108 3 3 305 1088 1415 5.04e-112 365
Msa0202040 MtrunA17_Chr2g0299881 57.143 336 105 4 3 304 1088 1418 1.04e-110 362
Msa0202040 MtrunA17_Chr2g0299881 58.904 73 28 1 125 195 1403 1475 2.71e-18 89.4
Msa0202040 MtrunA17_Chr2g0277021 39.177 559 278 15 1 522 120 653 2.77e-108 340
Msa0202040 MtrunA17_Chr7g0245521 78.500 200 43 0 19 218 74 273 2.22e-107 323
Msa0202040 MtrunA17_Chr1g0188601 78.010 191 42 0 37 227 1 191 1.77e-104 313
Msa0202040 MtrunA17_Chr7g0223671 73.399 203 48 2 12 210 3 203 1.14e-103 311
Msa0202040 MtrunA17_Chr7g0223771 85.621 153 22 0 38 190 1 153 2.17e-92 281
Msa0202040 MtrunA17_Chr1g0188611 57.519 266 103 3 266 529 30 287 2.28e-87 273
Msa0202040 MtrunA17_Chr4g0046881 78.014 141 28 1 80 220 14 151 4.18e-73 230
Msa0202040 MtrunA17_Chr7g0245541 61.658 193 73 1 333 525 1 192 4.75e-73 232
Msa0202040 MtrunA17_Chr6g0462631 46.465 297 116 4 45 325 22 291 1.07e-71 232
Msa0202040 MtrunA17_Chr7g0223861 81.679 131 24 0 23 153 4 134 1.09e-70 223
Msa0202040 MtrunA17_Chr6g0462791 60.571 175 68 1 54 228 2 175 9.07e-68 218
Msa0202040 MtrunA17_Chr6g0462751 40.346 347 117 5 19 332 19 308 2.23e-67 221
Msa0202040 MtrunA17_Chr5g0394391 29.792 433 258 10 19 410 94 521 9.68e-51 184
Msa0202040 MtrunA17_Chr6g0462701 52.632 171 57 1 45 215 22 168 1.30e-50 172
Msa0202040 MtrunA17_Chr4g0004331 30.848 389 221 6 18 360 65 451 3.40e-49 183
Msa0202040 MtrunA17_Chr2g0331901 31.765 340 199 4 18 326 65 402 2.71e-47 177
Msa0202040 MtrunA17_Chr3g0098761 29.609 358 217 5 18 344 65 418 1.42e-43 166
Msa0202040 MtrunA17_Chr5g0444001 29.508 366 221 5 18 348 65 428 2.33e-43 162
Msa0202040 MtrunA17_Chr3g0120101 28.346 381 217 9 18 346 92 468 1.48e-42 164
Msa0202040 MtrunA17_Chr4g0064621 31.556 450 249 15 19 419 211 650 3.33e-38 150
Msa0202040 MtrunA17_Chr4g0046871 74.444 90 22 1 264 353 19 107 1.54e-37 134
Msa0202040 MtrunA17_Chr7g0223871 57.500 120 51 0 407 526 7 126 2.64e-36 132
Msa0202040 MtrunA17_Chr6g0481391 68.367 98 26 1 7 104 39 131 2.09e-35 129
Msa0202040 MtrunA17_Chr5g0394231 35.526 228 96 4 18 244 4 181 3.70e-35 130
Msa0202040 MtrunA17_Chr5g0394221 31.962 316 164 9 225 496 40 348 1.09e-34 134
Msa0202040 MtrunA17_Chr4g0060241 29.040 427 227 15 36 412 106 506 5.47e-34 136
Msa0202040 MtrunA17_Chr7g0223791 50.000 132 57 1 357 488 58 180 9.25e-33 124
Msa0202040 MtrunA17_Chr7g0223791 62.121 66 23 2 17 82 28 91 2.10e-17 80.5
Msa0202040 MtrunA17_Chr6g0481381 72.973 74 20 0 121 194 1 74 5.93e-32 122
Msa0202040 MtrunA17_Chr6g0481381 58.511 94 39 0 431 524 75 168 2.61e-28 111
Msa0202040 MtrunA17_Chr5g0442171 27.660 329 188 9 115 403 1 319 7.09e-29 117
Msa0202040 MtrunA17_Chr6g0462691 48.246 114 57 2 266 378 30 142 6.81e-24 98.6
Msa0202040 MtrunA17_Chr7g0221651 46.988 83 44 0 160 242 1 83 7.85e-20 84.3
Msa0202040 MtrunA17_Chr7g0223661 59.459 74 29 1 276 349 4 76 5.13e-17 76.3
Msa0202040 MtrunA17_Chr2g0284661 52.381 84 38 2 283 365 61 143 6.26e-16 75.1
Msa0202040 MtrunA17_Chr2g0298871 83.333 42 7 0 548 589 1052 1093 8.94e-16 81.3
Msa0202040 MtrunA17_Chr4g0064651 41.935 93 52 2 312 403 29 120 1.13e-14 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0202040 AT5G02500.1 59.926 539 182 5 19 525 72 608 0.0 627
Msa0202040 AT3G12580.1 60.111 539 181 5 19 525 72 608 0.0 626
Msa0202040 AT5G02490.1 58.736 538 188 5 19 524 72 607 0.0 613
Msa0202040 AT3G09440.1 58.442 539 190 5 19 525 72 608 0.0 608
Msa0202040 AT3G09440.4 58.442 539 190 5 19 525 72 608 0.0 608
Msa0202040 AT3G09440.2 58.442 539 190 5 19 525 72 608 0.0 608
Msa0202040 AT3G09440.3 58.442 539 190 5 19 525 72 608 0.0 608
Msa0202040 AT1G16030.1 58.287 537 190 5 19 523 71 605 0.0 604
Msa0202040 AT1G56410.1 57.636 550 196 7 19 535 72 617 0.0 596
Msa0202040 AT5G28540.1 47.963 540 241 9 19 524 100 633 2.13e-161 477
Msa0202040 AT5G42020.1 47.866 539 241 9 19 523 100 632 1.23e-160 474
Msa0202040 AT5G42020.3 47.778 540 242 9 19 524 105 638 2.19e-160 474
Msa0202040 AT1G09080.2 48.752 521 229 7 19 506 105 620 1.26e-153 457
Msa0202040 AT1G09080.1 48.752 521 229 7 19 506 115 630 2.81e-153 456
Msa0202040 AT5G02500.2 67.405 316 73 1 19 304 72 387 3.67e-146 432
Msa0202040 AT5G42020.2 46.748 492 204 12 19 464 100 579 4.04e-132 400
Msa0202040 AT5G09590.1 41.942 515 245 13 18 496 122 618 1.45e-112 351
Msa0202040 AT4G37910.1 42.520 508 239 11 3 475 105 594 1.03e-109 344
Msa0202040 AT4G37910.2 42.520 508 239 11 3 475 105 594 1.03e-109 344
Msa0202040 AT4G24280.1 39.640 555 269 14 1 508 129 664 7.05e-109 343
Msa0202040 AT5G49910.1 39.820 555 268 14 1 508 129 664 2.50e-108 341
Msa0202040 AT2G32120.1 31.096 447 249 12 19 423 95 524 6.58e-49 179
Msa0202040 AT2G32120.2 31.096 447 249 12 19 423 95 524 6.58e-49 179
Msa0202040 AT1G79930.2 29.820 389 225 6 18 360 65 451 3.04e-48 180
Msa0202040 AT1G79930.1 29.820 389 225 6 18 360 65 451 3.69e-48 180
Msa0202040 AT1G79920.1 29.820 389 225 6 18 360 65 451 1.03e-47 178
Msa0202040 AT1G79920.3 29.820 389 225 6 18 360 65 451 1.09e-47 178
Msa0202040 AT1G79920.2 29.820 389 225 6 18 360 65 451 1.09e-47 178
Msa0202040 AT1G79920.4 29.820 389 225 6 18 360 65 451 1.09e-47 178
Msa0202040 AT1G11660.2 31.579 342 198 5 18 326 28 366 3.21e-47 177
Msa0202040 AT1G11660.4 31.579 342 198 5 18 326 65 403 3.70e-47 177
Msa0202040 AT1G11660.3 31.579 342 198 5 18 326 65 403 3.70e-47 177
Msa0202040 AT1G11660.1 31.579 342 198 5 18 326 65 403 3.70e-47 177
Msa0202040 AT4G16660.1 25.495 455 270 11 18 410 92 539 2.86e-45 172
Msa0202040 AT4G16660.2 25.495 455 270 11 18 410 116 563 2.99e-45 172

Find 136 sgRNAs with CRISPR-Local

Find 610 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTGGTCTAATTCCATTTA+AGG 0.156102 2_1:+24011243 Msa0202040:CDS
CGCAATAGTTCCTGCACTTT+TGG 0.163788 2_1:-24009577 None:intergenic
GGAGATTGCAGAGGCTTATT+TGG 0.170727 2_1:+24008927 Msa0202040:CDS
ATGGATGCTGGTGCCATTGC+TGG 0.234093 2_1:+24009018 Msa0202040:CDS
CCTGATGAGGCTGTTGCTTA+TGG 0.243454 2_1:+24009640 Msa0202040:CDS
TCAGATACTAAGAGGTTAAT+TGG 0.246077 2_1:+24008742 Msa0202040:CDS
GTGTCTCTCCTCACAATTAA+AGG 0.259274 2_1:+24009168 Msa0202040:CDS
GGAAATGGAATGGCCTTAAA+TGG 0.273636 2_1:-24011256 None:intergenic
TTTGAAGTTAAAGCCACTTC+TGG 0.288192 2_1:+24009198 Msa0202040:CDS
AAGGACACTCTCTTTCAAAT+TGG 0.288998 2_1:+24009362 Msa0202040:CDS
ACTTTGTGCAAGAATTTAAT+AGG 0.318140 2_1:+24009268 Msa0202040:CDS
AAAATTGATTCAAGAATCTA+AGG 0.321580 2_1:+24010092 Msa0202040:CDS
GAGGAATGCTCTAAAGAATA+AGG 0.327995 2_1:+24010191 Msa0202040:CDS
TATCTTTAGAAGTAAGATAT+TGG 0.330640 2_1:-24009825 None:intergenic
ACGAGCACTATGCTGCTTTC+CGG 0.349675 2_1:-24011224 None:intergenic
GGATAACCTTTCTTTGTCAT+TGG 0.352083 2_1:-24010055 None:intergenic
ACATTGTTGACGGGAGTTAC+TGG 0.353902 2_1:-24019206 None:intergenic
AATCTTCACACTCATTAAAA+AGG 0.354012 2_1:-24009473 None:intergenic
TGGCCGTTCAAGGTTATTGC+TGG 0.368855 2_1:+24008808 Msa0202040:CDS
CTGATGAGGCTGTTGCTTAT+GGG 0.384178 2_1:+24009641 Msa0202040:CDS
CTACAATCAAGGCACTATAT+TGG 0.386508 2_1:-24009849 None:intergenic
CTCAACCTCCTCAAGGCTCT+TGG 0.389032 2_1:-24009318 None:intergenic
ACGTCTCGCAGCACCAAGTT+TGG 0.390269 2_1:-24009709 None:intergenic
AGAGGCTTATTTGGAATTGC+CGG 0.390339 2_1:+24008936 Msa0202040:CDS
AGTTGGCCTCTTGCTGTGGT+TGG 0.390645 2_1:+24019167 Msa0202040:intron
CCATAAGCAACAGCCTCATC+AGG 0.390857 2_1:-24009640 None:intergenic
CCCATTGTCACTTGGTATCT+CGG 0.399514 2_1:+24009735 Msa0202040:CDS
CATTAAGAATGTTCCAAACT+TGG 0.400175 2_1:+24009696 Msa0202040:CDS
TGTCGTCGAAACTTAAGCTT+AGG 0.404435 2_1:-24019233 None:intergenic
TGAGATTGATTATTTATATG+AGG 0.407076 2_1:+24009395 Msa0202040:CDS
GCAACCTGAGCCTTCTCAAT+AGG 0.420503 2_1:+24019259 Msa0202040:CDS
GTTGGCCTCTTGCTGTGGTT+GGG 0.426101 2_1:+24019168 Msa0202040:intron
TGATTATCTTCACAACGTTA+AGG 0.432196 2_1:-24009041 None:intergenic
CCGAGATACCAAGTGACAAT+GGG 0.444390 2_1:-24009735 None:intergenic
TATACTGTTGTGGCCGTTCA+AGG 0.449502 2_1:+24008798 Msa0202040:CDS
CTATTGCGTAACTTCTTCAA+TGG 0.452833 2_1:+24009592 Msa0202040:CDS
TAAATAATCAATCTCAATAG+TGG 0.454560 2_1:-24009388 None:intergenic
TTGTCTTTGATCTTGGTGGT+GGG 0.456314 2_1:+24009136 Msa0202040:CDS
TTTGTCTTTGATCTTGGTGG+TGG 0.458128 2_1:+24009135 Msa0202040:CDS
CTTCTTGTGAAAAGCCGAAA+AGG 0.468949 2_1:+24009343 Msa0202040:CDS
ACTGCTGCAGCTATTGCATA+TGG 0.476452 2_1:+24009072 Msa0202040:CDS
CTGAAGATGAGAAATTCTTA+AGG 0.477776 2_1:+24010124 Msa0202040:CDS
TGTTCCTCGTGGCCATCCCT+TGG 0.477913 2_1:+24009945 Msa0202040:CDS
TTTAGAAGTAAGATATTGGC+TGG 0.480975 2_1:-24009821 None:intergenic
TATTGCGTAACTTCTTCAAT+GGG 0.481757 2_1:+24009593 Msa0202040:CDS
TTGACGGGAGTTACTGGTAC+TGG 0.487238 2_1:-24019200 None:intergenic
TTCTTGAGGATCATCTGAAA+GGG 0.487611 2_1:+24010319 Msa0202040:CDS
ATCTAATGCATTCATTACCT+TGG 0.490089 2_1:-24010151 None:intergenic
TGAGAATCGTTAAAATAAGC+AGG 0.500441 2_1:-24008982 None:intergenic
TAGTGTTAAGTACAAGGGTC+AGG 0.501144 2_1:+24008852 Msa0202040:CDS
GGATGGCCACGAGGAACACT+TGG 0.501644 2_1:-24009940 None:intergenic
CGAAAAGCCACCATGGATGC+TGG 0.502548 2_1:+24009006 Msa0202040:CDS
TATTGGCTGGTCTTCTTGAA+AGG 0.508102 2_1:-24009808 None:intergenic
ACGAGGAACACTTGGAAGAC+CGG 0.508128 2_1:-24009932 None:intergenic
TTTCACACCAATGACTGAAA+AGG 0.508419 2_1:-24011194 None:intergenic
GCCTTGATTGTAGTTTGTGA+GGG 0.515295 2_1:+24009859 Msa0202040:CDS
ATACTAAGAGGTTAATTGGT+AGG 0.520603 2_1:+24008746 Msa0202040:CDS
GTGAGTGACAACAACGTGCT+TGG 0.521927 2_1:+24009895 Msa0202040:CDS
TGATGAGGCTGTTGCTTATG+GGG 0.522303 2_1:+24009642 Msa0202040:CDS
CTTAGGGAAAACATTGTTGA+CGG 0.522322 2_1:-24019216 None:intergenic
TGCTTTGCTATCGATGAAAA+CGG 0.522627 2_1:+24009973 Msa0202040:CDS
CGATAACCAATGACAAAGAA+AGG 0.526916 2_1:+24010049 Msa0202040:CDS
GTCTAGGATTCCAAAAGTGC+AGG 0.532443 2_1:+24009567 Msa0202040:intron
GAACATCTACTTCATTCCCC+TGG 0.535646 2_1:-24010299 None:intergenic
TTAAGGCCATTCCATTTCCA+TGG 0.537302 2_1:+24011260 Msa0202040:CDS
AAAGGTACAGAAGTGTTCCT+AGG 0.538214 2_1:-24009790 None:intergenic
TTATGAGTGTGGTGATTCCT+AGG 0.538278 2_1:+24009773 Msa0202040:CDS
GAGGTGAGTGTTTCCAGAAG+TGG 0.538709 2_1:-24009211 None:intergenic
ACCCTCACAAACTACAATCA+AGG 0.539796 2_1:-24009860 None:intergenic
AGCAATGGCACCAGCATCCA+TGG 0.539868 2_1:-24009016 None:intergenic
TGCCTTGATTGTAGTTTGTG+AGG 0.542190 2_1:+24009858 Msa0202040:CDS
GACGTTACCCCATTGTCACT+TGG 0.546373 2_1:+24009727 Msa0202040:CDS
TTTCAGTTGGCCTCTTGCTG+TGG 0.549315 2_1:+24019163 Msa0202040:intron
TTGTAGTTTGTGAGGGTGAG+AGG 0.551491 2_1:+24009866 Msa0202040:CDS
AACTTCCCAACCACAGCAAG+AGG 0.554970 2_1:-24019173 None:intergenic
TCAGCAGAGGAAAGATCCAC+TGG 0.557101 2_1:+24010009 Msa0202040:CDS
GTTCTTGAGGATCATCTGAA+AGG 0.557323 2_1:+24010318 Msa0202040:CDS
TACGATTAGTGTTAAGTACA+AGG 0.559474 2_1:+24008846 Msa0202040:CDS
CAAGCCTATTGAGAAGGCTC+AGG 0.559670 2_1:-24019263 None:intergenic
TTAGGGAAAACATTGTTGAC+GGG 0.559711 2_1:-24019215 None:intergenic
GATCTCATTCTTACTTCCAG+TGG 0.560329 2_1:-24010025 None:intergenic
GTCGTCGAAACTTAAGCTTA+GGG 0.563380 2_1:-24019232 None:intergenic
ATCGTTAAAATAAGCAGGAA+CGG 0.570371 2_1:-24008977 None:intergenic
CAATCTCCTTCATGTTTGTG+AGG 0.570747 2_1:-24008912 None:intergenic
GCGTAACTTCTTCAATGGGA+AGG 0.571597 2_1:+24009597 Msa0202040:CDS
AGCTCACCATGGAAATGGAA+TGG 0.576448 2_1:-24011266 None:intergenic
AGAATTTCTCATCTTCAGCA+TGG 0.578307 2_1:-24010119 None:intergenic
TGTAGTTTGTGAGGGTGAGA+GGG 0.579578 2_1:+24009867 Msa0202040:CDS
ATGACTGCATCTACAAGTTG+AGG 0.584734 2_1:+24010172 Msa0202040:CDS
ACCGAGATACCAAGTGACAA+TGG 0.590955 2_1:-24009736 None:intergenic
TTGTACTTAACACTAATCGT+AGG 0.591476 2_1:-24008844 None:intergenic
ATATGCAATAGCTGCAGCAG+TGG 0.594040 2_1:-24009070 None:intergenic
AGAACAAAGTGGATATCACT+AGG 0.600332 2_1:+24009292 Msa0202040:CDS
TATGCAATAGCTGCAGCAGT+GGG 0.602359 2_1:-24009069 None:intergenic
AGCTTAAGTTTCGACGACAT+AGG 0.603836 2_1:+24019237 Msa0202040:CDS
AGATGAGAAATTCTTAAGGA+AGG 0.604898 2_1:+24010128 Msa0202040:CDS
TTGCTTCATAAGAATAACCA+GGG 0.605023 2_1:+24010282 Msa0202040:CDS
GATAGCAAAGCATACATCCA+AGG 0.607442 2_1:-24009962 None:intergenic
CACAACGTTAAGGCCAGCAA+TGG 0.608818 2_1:-24009031 None:intergenic
ATTTAATAGGAAGAACAAAG+TGG 0.609345 2_1:+24009281 Msa0202040:CDS
TTTGCTTCATAAGAATAACC+AGG 0.610100 2_1:+24010281 Msa0202040:CDS
AGACATCACCTTTAATTGTG+AGG 0.611395 2_1:-24009176 None:intergenic
TGTTGTCCTCACAAACATGA+AGG 0.611884 2_1:+24008906 Msa0202040:CDS
CATCTTAACTGTTTCAGCAG+AGG 0.613572 2_1:+24009996 Msa0202040:CDS
ACACCAGCAATAACCTTGAA+CGG 0.614534 2_1:-24008811 None:intergenic
GAATAACAAGCCTATTGAGA+AGG 0.616224 2_1:-24019269 None:intergenic
GAATGAAGTAGATGTTCTTG+AGG 0.618161 2_1:+24010305 Msa0202040:CDS
ATAGCAAAGCATACATCCAA+GGG 0.619096 2_1:-24009961 None:intergenic
TTCTCAGCGAAAAGCCACCA+TGG 0.620029 2_1:+24008999 Msa0202040:CDS
CAAGCTGCTGTGTTGAGTGA+AGG 0.627003 2_1:+24009673 Msa0202040:CDS
AAACACTCACCTCGGAGGAG+AGG 0.629616 2_1:+24009221 Msa0202040:CDS
CAAAGCATACATCCAAGGGA+TGG 0.629656 2_1:-24009957 None:intergenic
CAAGTTTGAAGAAATCAACA+TGG 0.636916 2_1:+24009449 Msa0202040:CDS
GGAGAAGCTCCTTTGTGCAG+AGG 0.636950 2_1:+24008873 Msa0202040:CDS
TAATGATTGTATTATGAGTG+TGG 0.637758 2_1:+24009762 Msa0202040:CDS
ATTGGTGTGAAATCTAGCAC+CGG 0.638161 2_1:+24011205 Msa0202040:CDS
CATAAGCAACAGCCTCATCA+GGG 0.640869 2_1:-24009639 None:intergenic
AGAAGTTCTCAACCTCCTCA+AGG 0.646239 2_1:-24009325 None:intergenic
GACAAAAGAAGTAATTGTGA+TGG 0.650690 2_1:+24009099 Msa0202040:CDS
GGAAAGCAGCATAGTGCTCG+TGG 0.651853 2_1:+24011226 Msa0202040:CDS
CTAGGAATCCAAGAGCCTTG+AGG 0.655232 2_1:+24009310 Msa0202040:CDS
CAAGAGCATCAACCCTGATG+AGG 0.657948 2_1:+24009627 Msa0202040:CDS
ATGAGATTTCCTCTGCACAA+AGG 0.658321 2_1:-24008882 None:intergenic
ACTTCTGGAAACACTCACCT+CGG 0.658719 2_1:+24009213 Msa0202040:CDS
GAAATTCTTAAGGAAGGCCA+AGG 0.662766 2_1:+24010134 Msa0202040:CDS
GGAATCCAAGAGCCTTGAGG+AGG 0.663076 2_1:+24009313 Msa0202040:CDS
GATCAATCGTGCAATAACTG+TGG 0.674376 2_1:+24010251 Msa0202040:CDS
ACGATTAGTGTTAAGTACAA+GGG 0.676520 2_1:+24008847 Msa0202040:CDS
AAACATGAAGGAGATTGCAG+AGG 0.695775 2_1:+24008918 Msa0202040:CDS
ACATCCAAGGGATGGCCACG+AGG 0.704531 2_1:-24009949 None:intergenic
TATCAAAGTCCTCTCCTCCG+AGG 0.705594 2_1:-24009230 None:intergenic
CGAGATACCAAGTGACAATG+GGG 0.706870 2_1:-24009734 None:intergenic
GGTCTTCCAAGTGTTCCTCG+TGG 0.707924 2_1:+24009934 Msa0202040:CDS
TCTGGAAACACTCACCTCGG+AGG 0.712848 2_1:+24009216 Msa0202040:CDS
TGCTTCATAAGAATAACCAG+GGG 0.713870 2_1:+24010283 Msa0202040:CDS
AATGGCACCAGCATCCATGG+TGG 0.736459 2_1:-24009013 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTAAATATTATAA+GGG - chr2_1:24012043-24012062 None:intergenic 0.0%
!!! ATTTAAAATAAAAATAAAAA+GGG - chr2_1:24012785-24012804 None:intergenic 0.0%
!!! TATTTAAAATAAAAATAAAA+AGG - chr2_1:24012786-24012805 None:intergenic 0.0%
!!! TTTTTTAAAATAAAAAAATA+CGG + chr2_1:24018703-24018722 Msa0202040:intron 0.0%
!!! TATCAAATAGTATATATTTT+GGG + chr2_1:24011526-24011545 Msa0202040:intron 10.0%
!! AAATATACAAATAATTAATC+AGG - chr2_1:24012350-24012369 None:intergenic 10.0%
!! GTATCAAAAAAATATTAATT+AGG - chr2_1:24012432-24012451 None:intergenic 10.0%
!!! CTATTTTTTTTTTTTTTTGA+GGG + chr2_1:24012865-24012884 Msa0202040:intron 10.0%
!!! ATTTTATCATATATTTTTGT+AGG - chr2_1:24013181-24013200 None:intergenic 10.0%
!! AAATTCTAAACTTATATAAA+AGG + chr2_1:24014318-24014337 Msa0202040:intron 10.0%
!! AATTCTAAACTTATATAAAA+GGG + chr2_1:24014319-24014338 Msa0202040:intron 10.0%
!! TTATTTACAAAATAAAGTTT+AGG - chr2_1:24014511-24014530 None:intergenic 10.0%
!! TACTATTAAATTAAAATGTA+TGG - chr2_1:24015164-24015183 None:intergenic 10.0%
!!! ATTTTTTTAACAAAAAATCA+AGG + chr2_1:24015634-24015653 Msa0202040:intron 10.0%
!! AATTATAAATCAAATACATT+AGG - chr2_1:24015767-24015786 None:intergenic 10.0%
!!! AATGTATTTGATTTATAATT+AGG + chr2_1:24015767-24015786 Msa0202040:intron 10.0%
!!! TTTTATTATATGTTTAATTG+TGG - chr2_1:24017110-24017129 None:intergenic 10.0%
!!! ATAATAAAAGGTATTAAATT+GGG - chr2_1:24017246-24017265 None:intergenic 10.0%
!!! TATAATAAAAGGTATTAAAT+TGG - chr2_1:24017247-24017266 None:intergenic 10.0%
!!! AGTATATTCTTTATATTTTT+TGG + chr2_1:24017330-24017349 Msa0202040:intron 10.0%
!! CATTGATATATTATAAATTT+AGG + chr2_1:24018155-24018174 Msa0202040:intron 10.0%
!!! AGAAAAAAATAGATTTTTTT+TGG + chr2_1:24018484-24018503 Msa0202040:intron 10.0%
!!! TATATCTAATAGTATTTTGA+AGG + chr2_1:24010450-24010469 Msa0202040:intron 15.0%
!!! TAGTTTAGATTTTATTTGAT+TGG + chr2_1:24010604-24010623 Msa0202040:intron 15.0%
!! TAAAATGATACAAAAAGTTT+AGG - chr2_1:24010956-24010975 None:intergenic 15.0%
!!! GTATCAAATAGTATATATTT+TGG + chr2_1:24011525-24011544 Msa0202040:intron 15.0%
!! TTATTAATATATTACAGAGA+AGG + chr2_1:24012306-24012325 Msa0202040:intron 15.0%
!!! TATTAACTAGTTGATATAAT+TGG + chr2_1:24012458-24012477 Msa0202040:intron 15.0%
!! AAAAAAAAAAAAAATAGGTG+AGG - chr2_1:24012862-24012881 None:intergenic 15.0%
!! CCTCAAAAAAAAAAAAAAAT+AGG - chr2_1:24012867-24012886 None:intergenic 15.0%
!!! CCTATTTTTTTTTTTTTTTG+AGG + chr2_1:24012864-24012883 Msa0202040:intron 15.0%
!!! TTTTTTATGAATCAATAGAT+AGG - chr2_1:24012900-24012919 None:intergenic 15.0%
!!! TTGTACTATTATCATTTTTT+TGG + chr2_1:24013005-24013024 Msa0202040:intron 15.0%
!!! TGTACTATTATCATTTTTTT+GGG + chr2_1:24013006-24013025 Msa0202040:intron 15.0%
!! TATGATAAAATTAAAGTGAT+CGG + chr2_1:24013190-24013209 Msa0202040:intron 15.0%
!!! TTTCTTATTTATTATTAGCT+TGG + chr2_1:24013777-24013796 Msa0202040:intron 15.0%
!! TTATAAATCTTGAATTTCTT+TGG - chr2_1:24013825-24013844 None:intergenic 15.0%
!! AAATGATATAATATATGCAT+GGG - chr2_1:24014894-24014913 None:intergenic 15.0%
!! AAGAATTTATAGTCTATATT+TGG + chr2_1:24014986-24015005 Msa0202040:intron 15.0%
!! AGAATTTATAGTCTATATTT+GGG + chr2_1:24014987-24015006 Msa0202040:intron 15.0%
!! ATAAAAAAAACACATTCTAA+GGG + chr2_1:24015208-24015227 Msa0202040:intron 15.0%
!!! TAAGCAAAAAACTATTTTTT+AGG + chr2_1:24015730-24015749 Msa0202040:intron 15.0%
!!! TTTTTACTTATAAATGTTAC+CGG + chr2_1:24015814-24015833 Msa0202040:intron 15.0%
!! ATTCAAAAATAGTAAACATT+GGG - chr2_1:24016130-24016149 None:intergenic 15.0%
!!! AATTTTGAACACATTTTTTA+TGG + chr2_1:24016895-24016914 Msa0202040:intron 15.0%
!! ATATTGTATTCAAAATTGAA+AGG - chr2_1:24017174-24017193 None:intergenic 15.0%
!! AGAATAGTGTATAAATTAAA+AGG - chr2_1:24017290-24017309 None:intergenic 15.0%
!!! AAATATATTGTTGGTTTATT+GGG + chr2_1:24017395-24017414 Msa0202040:intron 15.0%
!!! CTGTTTTTTTTTTTTTTTGA+AGG - chr2_1:24017867-24017886 None:intergenic 15.0%
!!! AATGCTATTTAAAATTTCAT+AGG + chr2_1:24017902-24017921 Msa0202040:intron 15.0%
!!! TAGAAAAAATGGATTTTTAT+GGG - chr2_1:24018289-24018308 None:intergenic 15.0%
!!! TTAGAAAAAATGGATTTTTA+TGG - chr2_1:24018290-24018309 None:intergenic 15.0%
!!! AAACTCATTTTTAGAAAAAA+TGG - chr2_1:24018300-24018319 None:intergenic 15.0%
!!! AATATTTTTGTCTTTGATCT+TGG + chr2_1:24009129-24009148 Msa0202040:CDS 20.0%
!! TAAATAATCAATCTCAATAG+TGG - chr2_1:24009391-24009410 None:intergenic 20.0%
!! TGAGATTGATTATTTATATG+AGG + chr2_1:24009395-24009414 Msa0202040:CDS 20.0%
!!! TATCTTTAGAAGTAAGATAT+TGG - chr2_1:24009828-24009847 None:intergenic 20.0%
!!! AAAATTGATTCAAGAATCTA+AGG + chr2_1:24010092-24010111 Msa0202040:CDS 20.0%
!! AAAATCTAAACTAACTGAAA+TGG - chr2_1:24010597-24010616 None:intergenic 20.0%
!! TGAGTACAAATTTAAAAACT+TGG + chr2_1:24010767-24010786 Msa0202040:intron 20.0%
!! AATTTAAAAACTTGGTTGAA+AGG + chr2_1:24010775-24010794 Msa0202040:intron 20.0%
!! GTTTATAAGCACTAATTAAA+AGG - chr2_1:24010888-24010907 None:intergenic 20.0%
!! TTAAGGGAAATAATTAATAG+AGG - chr2_1:24011351-24011370 None:intergenic 20.0%
!! TCAATTATCATAAATGCAAA+TGG + chr2_1:24012369-24012388 Msa0202040:intron 20.0%
!!! ACTAAAATTGATTTGCTTTA+AGG + chr2_1:24012508-24012527 Msa0202040:intron 20.0%
!!! CTAAAATTGATTTGCTTTAA+GGG + chr2_1:24012509-24012528 Msa0202040:intron 20.0%
!!! AGTGATGGTATTTTTTTATT+TGG + chr2_1:24012589-24012608 Msa0202040:intron 20.0%
!! CAACTTAAATATAAGATGTT+GGG - chr2_1:24012988-24013007 None:intergenic 20.0%
!! ACAACTTAAATATAAGATGT+TGG - chr2_1:24012989-24013008 None:intergenic 20.0%
!! TGTAAAAAAAAAGAGCAAAT+AGG - chr2_1:24013033-24013052 None:intergenic 20.0%
!! ATCTAAATAAGTGATTATCT+AGG - chr2_1:24013386-24013405 None:intergenic 20.0%
!!! AAACTTTTTATCAATTCAAG+TGG + chr2_1:24013881-24013900 Msa0202040:intron 20.0%
!! GCATTTAAATAGAAGATTAT+AGG + chr2_1:24014061-24014080 Msa0202040:intron 20.0%
!! AGGTAAGAATATTAAAGATA+TGG + chr2_1:24014138-24014157 Msa0202040:intron 20.0%
!! GGTAAGAATATTAAAGATAT+GGG + chr2_1:24014139-24014158 Msa0202040:intron 20.0%
!! AACTTATATAAAAGGGTTAA+AGG + chr2_1:24014326-24014345 Msa0202040:intron 20.0%
!!! ATGTTAATGAAAGTTGATTT+AGG + chr2_1:24014358-24014377 Msa0202040:intron 20.0%
!! AAGCTAACTATATCAATATA+TGG + chr2_1:24014721-24014740 Msa0202040:intron 20.0%
!! CAAATGATATAATATATGCA+TGG - chr2_1:24014895-24014914 None:intergenic 20.0%
!! CATAAAAAAAACACATTCTA+AGG + chr2_1:24015207-24015226 Msa0202040:intron 20.0%
!!! TTTTTGCTTATAAATGTAAC+TGG - chr2_1:24015720-24015739 None:intergenic 20.0%
!! TTAAAATACATTACTCATTC+CGG - chr2_1:24015836-24015855 None:intergenic 20.0%
!!! GAATGAGTAATGTATTTTAA+GGG + chr2_1:24015836-24015855 Msa0202040:intron 20.0%
!! TTAGGGAATTCTAATTTAAA+AGG + chr2_1:24015864-24015883 Msa0202040:intron 20.0%
!! TAGGGAATTCTAATTTAAAA+GGG + chr2_1:24015865-24015884 Msa0202040:intron 20.0%
!! GATTCAAAAATAGTAAACAT+TGG - chr2_1:24016131-24016150 None:intergenic 20.0%
!! TATATCCCATAAAAAAAGAA+GGG - chr2_1:24016237-24016256 None:intergenic 20.0%
!! ATATATCCCATAAAAAAAGA+AGG - chr2_1:24016238-24016257 None:intergenic 20.0%
!!! GAATAATTTTGTCATAGAAA+TGG + chr2_1:24017007-24017026 Msa0202040:intron 20.0%
!! GTCAAAAAAAACAAATTGAA+AGG - chr2_1:24017141-24017160 None:intergenic 20.0%
!! ATATACTTAACTATTTCACA+TGG - chr2_1:24017317-24017336 None:intergenic 20.0%
!!! CAAATATATTGTTGGTTTAT+TGG + chr2_1:24017394-24017413 Msa0202040:intron 20.0%
!! AGTAATATAGTAGAAAATGT+TGG - chr2_1:24017525-24017544 None:intergenic 20.0%
!! AGTGAAAATAACAAGATATT+TGG + chr2_1:24017643-24017662 Msa0202040:intron 20.0%
!! CATAATTATGATGTGTTAAT+TGG - chr2_1:24017686-24017705 None:intergenic 20.0%
!!! TTTTTTTTACAACGATTTCT+TGG + chr2_1:24018019-24018038 Msa0202040:intron 20.0%
!! TATATCAATGACTTATATTG+AGG - chr2_1:24018145-24018164 None:intergenic 20.0%
!!! ATCTATTTTTTTCAACAACA+AGG - chr2_1:24018344-24018363 None:intergenic 20.0%
!!! TCATTTTTAAGTGTTTGTTT+TGG - chr2_1:24018446-24018465 None:intergenic 20.0%
!! TAAAAAAATCCAAAACACAT+TGG - chr2_1:24018690-24018709 None:intergenic 20.0%
!! AAAAAAAAACAAAACAGGAA+GGG - chr2_1:24019133-24019152 None:intergenic 20.0%
!! AAAAAAAAAACAAAACAGGA+AGG - chr2_1:24019134-24019153 None:intergenic 20.0%
!! GAAGAAAAAAAAAACAAAAC+AGG - chr2_1:24019138-24019157 None:intergenic 20.0%
!!! TTTTTTCTTCAGATACTAAG+AGG + chr2_1:24008734-24008753 Msa0202040:CDS 25.0%
! TTCAAAAAGATATACTGTTG+TGG + chr2_1:24008788-24008807 Msa0202040:CDS 25.0%
! ACTTTGTGCAAGAATTTAAT+AGG + chr2_1:24009268-24009287 Msa0202040:CDS 25.0%
! ATTTAATAGGAAGAACAAAG+TGG + chr2_1:24009281-24009300 Msa0202040:CDS 25.0%
! AATCTTCACACTCATTAAAA+AGG - chr2_1:24009476-24009495 None:intergenic 25.0%
! TAATGATTGTATTATGAGTG+TGG + chr2_1:24009762-24009781 Msa0202040:CDS 25.0%
!!! TCTAATAGTATTTTGAAGGT+TGG + chr2_1:24010454-24010473 Msa0202040:intron 25.0%
! AATGCTTAAACATACCAAAT+AGG - chr2_1:24010688-24010707 None:intergenic 25.0%
! TAAATTTGTACTCAGTAAAG+CGG - chr2_1:24010761-24010780 None:intergenic 25.0%
! AAATATAAGAGACAATCACA+TGG - chr2_1:24011034-24011053 None:intergenic 25.0%
!! TGATATAGATGCATTTTCTT+GGG - chr2_1:24011068-24011087 None:intergenic 25.0%
!! TTGATATAGATGCATTTTCT+TGG - chr2_1:24011069-24011088 None:intergenic 25.0%
! ATATTCATTTCATCTTGAGA+AGG + chr2_1:24011475-24011494 Msa0202040:intron 25.0%
! TTTGATACAAAAAGAGAATG+AGG - chr2_1:24011513-24011532 None:intergenic 25.0%
! AATTATATCCCTTAATTTCG+TGG + chr2_1:24011584-24011603 Msa0202040:intron 25.0%
! TATATAGACCACGAAATTAA+GGG - chr2_1:24011595-24011614 None:intergenic 25.0%
! ACAAATGAGGAAAATATAAG+GGG - chr2_1:24011647-24011666 None:intergenic 25.0%
! CACAAATGAGGAAAATATAA+GGG - chr2_1:24011648-24011667 None:intergenic 25.0%
! TCACAAATGAGGAAAATATA+AGG - chr2_1:24011649-24011668 None:intergenic 25.0%
! ATTATTTATTGACGTAACAC+CGG + chr2_1:24011712-24011731 Msa0202040:intron 25.0%
! TGGATTGTGTGTTTATAATA+AGG + chr2_1:24011845-24011864 Msa0202040:intron 25.0%
! GGATTGTGTGTTTATAATAA+GGG + chr2_1:24011846-24011865 Msa0202040:intron 25.0%
! ACTGGTTAAGGAAATATAAA+AGG + chr2_1:24011893-24011912 Msa0202040:intron 25.0%
! GAAAGAAAAAACTAAGTCAA+CGG - chr2_1:24011973-24011992 None:intergenic 25.0%
! TGACTACCAACTATTAAATT+GGG - chr2_1:24012086-24012105 None:intergenic 25.0%
! TTGACTACCAACTATTAAAT+TGG - chr2_1:24012087-24012106 None:intergenic 25.0%
! AAGAGTAACAACTTATTATG+AGG + chr2_1:24012392-24012411 Msa0202040:intron 25.0%
! AGAGTAACAACTTATTATGA+GGG + chr2_1:24012393-24012412 Msa0202040:intron 25.0%
! ATTTACCACTTTAACCAATT+TGG + chr2_1:24012545-24012564 Msa0202040:intron 25.0%
! CAAAAAAAGAAACTTTGCAT+TGG - chr2_1:24012722-24012741 None:intergenic 25.0%
!!! TTCATCATTTACGTTTTTAG+CGG - chr2_1:24013107-24013126 None:intergenic 25.0%
! CGATTATTCAATCAAAGATT+TGG - chr2_1:24013250-24013269 None:intergenic 25.0%
! AATCTAGAGAGAAAAATCTA+AGG + chr2_1:24013490-24013509 Msa0202040:intron 25.0%
!! ATTTCTGTCATTTACGATAT+TGG - chr2_1:24013610-24013629 None:intergenic 25.0%
! TGATAAAAAGTTTCGTACTA+TGG - chr2_1:24013874-24013893 None:intergenic 25.0%
! CAAATATGGGATCAATTTAA+AGG - chr2_1:24014026-24014045 None:intergenic 25.0%
! AAATTGATCCCATATTTGAA+AGG + chr2_1:24014028-24014047 Msa0202040:intron 25.0%
! TGATTACACAATATAGTGAT+TGG + chr2_1:24014285-24014304 Msa0202040:intron 25.0%
!! AATGAAAGTTGATTTAGGTA+AGG + chr2_1:24014363-24014382 Msa0202040:intron 25.0%
! TGTTAGATATTGTAAGTCTT+TGG + chr2_1:24014474-24014493 Msa0202040:intron 25.0%
! AAATTCAAATCCACTTAGAA+GGG - chr2_1:24014552-24014571 None:intergenic 25.0%
!! TTGGTTTAAAGCTTCAATAA+TGG + chr2_1:24014570-24014589 Msa0202040:intron 25.0%
!! CACATCCATTTTCTTTTTAT+AGG + chr2_1:24014619-24014638 Msa0202040:intron 25.0%
!!! TATTGATATAGTTAGCTTGT+TGG - chr2_1:24014719-24014738 None:intergenic 25.0%
!! CACTTTTCCATTATTATAGT+AGG - chr2_1:24014758-24014777 None:intergenic 25.0%
! CTATTGACATGAAAAAACAA+AGG - chr2_1:24014803-24014822 None:intergenic 25.0%
! TTAACCATTTAACACAAGTA+TGG + chr2_1:24015376-24015395 Msa0202040:intron 25.0%
!! ATTTAAGTTCATGCAAAGAT+GGG - chr2_1:24015546-24015565 None:intergenic 25.0%
!! GGAATGAGTAATGTATTTTA+AGG + chr2_1:24015835-24015854 Msa0202040:intron 25.0%
!!! TGTATTTTAAGGGTTTGTTT+AGG + chr2_1:24015846-24015865 Msa0202040:intron 25.0%
!!! GTATTTTAAGGGTTTGTTTA+GGG + chr2_1:24015847-24015866 Msa0202040:intron 25.0%
!! AAATGAAATTTGTTTGCAAG+CGG + chr2_1:24015892-24015911 Msa0202040:intron 25.0%
! TATTCCTTGATTTCAACAAA+CGG - chr2_1:24015964-24015983 None:intergenic 25.0%
!!! TGTTTACCCTTCTTTTTTTA+TGG + chr2_1:24016228-24016247 Msa0202040:intron 25.0%
!!! GTTTACCCTTCTTTTTTTAT+GGG + chr2_1:24016229-24016248 Msa0202040:intron 25.0%
!!! TTGTGTTTTTGAAAAAATCG+TGG + chr2_1:24016308-24016327 Msa0202040:intron 25.0%
!!! AAAATCGTGGCAAAATTTTT+TGG + chr2_1:24016321-24016340 Msa0202040:intron 25.0%
!! AAGATTCAAGATGTGAATTT+TGG + chr2_1:24016600-24016619 Msa0202040:intron 25.0%
!!! CTTTTAAGAAGAGATTCATT+CGG + chr2_1:24016662-24016681 Msa0202040:intron 25.0%
!!! AAAGATCGAAGTTTTTGTTT+TGG - chr2_1:24016806-24016825 None:intergenic 25.0%
!! ACTATAATCTAGTGTGATTT+TGG - chr2_1:24017045-24017064 None:intergenic 25.0%
!!! TATTAAATTGGGAGTTTTGA+TGG - chr2_1:24017235-24017254 None:intergenic 25.0%
!! ATTAAGATGGAAAAGTGTAT+TGG - chr2_1:24017360-24017379 None:intergenic 25.0%
! GAAACTGTCAAATATATTGT+TGG + chr2_1:24017386-24017405 Msa0202040:intron 25.0%
! ATATAGTAGAAAATGTTGGA+TGG - chr2_1:24017521-24017540 None:intergenic 25.0%
! AAATCTAACCAAATGAATGA+TGG - chr2_1:24017622-24017641 None:intergenic 25.0%
! TGTTGCAGACATATATTTAA+AGG + chr2_1:24017763-24017782 Msa0202040:intron 25.0%
!! CTTTTGACCAAATTATAGTT+TGG + chr2_1:24018088-24018107 Msa0202040:intron 25.0%
!!! TATTTTTTTCAACAACAAGG+AGG - chr2_1:24018341-24018360 None:intergenic 25.0%
!! TCCTAATAGCTTTTCATTTA+AGG + chr2_1:24018379-24018398 Msa0202040:intron 25.0%
! TCCTTAAATGAAAAGCTATT+AGG - chr2_1:24018383-24018402 None:intergenic 25.0%
! ATGATGAAAAAGTTGTTACA+AGG + chr2_1:24018553-24018572 Msa0202040:intron 25.0%
! GTAAATTGAGACATTCTATT+TGG + chr2_1:24018591-24018610 Msa0202040:intron 25.0%
! ATTTAATCGGTAGTGTATAA+CGG + chr2_1:24018765-24018784 Msa0202040:intron 25.0%
! GGAACAAATTAAACTATCAA+TGG - chr2_1:24019016-24019035 None:intergenic 25.0%
!!! TTTAATTTGTTCCAAGAATG+TGG + chr2_1:24019023-24019042 Msa0202040:intron 25.0%
!!! TTTTCTTCCTATTTTTCAGT+TGG + chr2_1:24019150-24019169 Msa0202040:intron 25.0%
TCAGATACTAAGAGGTTAAT+TGG + chr2_1:24008742-24008761 Msa0202040:CDS 30.0%
ATACTAAGAGGTTAATTGGT+AGG + chr2_1:24008746-24008765 Msa0202040:CDS 30.0%
TTGTACTTAACACTAATCGT+AGG - chr2_1:24008847-24008866 None:intergenic 30.0%
TACGATTAGTGTTAAGTACA+AGG + chr2_1:24008846-24008865 Msa0202040:CDS 30.0%
ACGATTAGTGTTAAGTACAA+GGG + chr2_1:24008847-24008866 Msa0202040:CDS 30.0%
ATCGTTAAAATAAGCAGGAA+CGG - chr2_1:24008980-24008999 None:intergenic 30.0%
TGAGAATCGTTAAAATAAGC+AGG - chr2_1:24008985-24009004 None:intergenic 30.0%
TGATTATCTTCACAACGTTA+AGG - chr2_1:24009044-24009063 None:intergenic 30.0%
! CACAATTACTTCTTTTGTCA+AGG - chr2_1:24009098-24009117 None:intergenic 30.0%
GACAAAAGAAGTAATTGTGA+TGG + chr2_1:24009099-24009118 Msa0202040:CDS 30.0%
! ATTTTTGTCTTTGATCTTGG+TGG + chr2_1:24009132-24009151 Msa0202040:CDS 30.0%
CAAGTTTGAAGAAATCAACA+TGG + chr2_1:24009449-24009468 Msa0202040:CDS 30.0%
GTACATGATATTGTTCTTGT+TGG + chr2_1:24009538-24009557 Msa0202040:intron 30.0%
TATTGCGTAACTTCTTCAAT+GGG + chr2_1:24009593-24009612 Msa0202040:CDS 30.0%
CATTAAGAATGTTCCAAACT+TGG + chr2_1:24009696-24009715 Msa0202040:CDS 30.0%
TTTAGAAGTAAGATATTGGC+TGG - chr2_1:24009824-24009843 None:intergenic 30.0%
!!! CTTGGTTTTTTCAATCTTTC+CGG + chr2_1:24009913-24009932 Msa0202040:CDS 30.0%
!! CAATTTTTCAATTTCGACTC+TGG - chr2_1:24010079-24010098 None:intergenic 30.0%
CTGAAGATGAGAAATTCTTA+AGG + chr2_1:24010124-24010143 Msa0202040:CDS 30.0%
AGATGAGAAATTCTTAAGGA+AGG + chr2_1:24010128-24010147 Msa0202040:CDS 30.0%
ATCTAATGCATTCATTACCT+TGG - chr2_1:24010154-24010173 None:intergenic 30.0%
TTTGCTTCATAAGAATAACC+AGG + chr2_1:24010281-24010300 Msa0202040:CDS 30.0%
TTGCTTCATAAGAATAACCA+GGG + chr2_1:24010282-24010301 Msa0202040:CDS 30.0%
AAAAGACTGTAACCATGATT+TGG + chr2_1:24010559-24010578 Msa0202040:intron 30.0%
AAAGACTGTAACCATGATTT+GGG + chr2_1:24010560-24010579 Msa0202040:intron 30.0%
! TTTCATAACTTGCATGTCAT+TGG + chr2_1:24010853-24010872 Msa0202040:intron 30.0%
GCAAGCTAGCATTATTTAAT+AGG - chr2_1:24010924-24010943 None:intergenic 30.0%
! TAAATAGCCTTTTCAGTCAT+TGG + chr2_1:24011187-24011206 Msa0202040:intron 30.0%
!! TTCAATGAAAAGCACTACAA+GGG - chr2_1:24011377-24011396 None:intergenic 30.0%
GCAGCATTATTGAAAAACAA+GGG - chr2_1:24011402-24011421 None:intergenic 30.0%
TGCAGCATTATTGAAAAACA+AGG - chr2_1:24011403-24011422 None:intergenic 30.0%
GCTTATGTCAAAAATAGACT+AGG + chr2_1:24011439-24011458 Msa0202040:intron 30.0%
GTATATAGACCACGAAATTA+AGG - chr2_1:24011596-24011615 None:intergenic 30.0%
AGACTATCAAATCACAAATG+AGG - chr2_1:24011660-24011679 None:intergenic 30.0%
TCATAATAGATATGAGAGTC+CGG - chr2_1:24011734-24011753 None:intergenic 30.0%
AAAAGTTTGACACTCGAATT+AGG + chr2_1:24011803-24011822 Msa0202040:intron 30.0%
ACTAATTAAGCAGCTAAAAG+TGG - chr2_1:24011995-24012014 None:intergenic 30.0%
ACTACTCCCAATTTAATAGT+TGG + chr2_1:24012077-24012096 Msa0202040:intron 30.0%
CATAAACTTGGAGGAAAATT+GGG + chr2_1:24012173-24012192 Msa0202040:intron 30.0%
ACTAGGATCGCTAAAAAATA+TGG + chr2_1:24012221-24012240 Msa0202040:intron 30.0%
TCTAACATTCGCGATATTTA+AGG + chr2_1:24012254-24012273 Msa0202040:intron 30.0%
CTAACATTCGCGATATTTAA+GGG + chr2_1:24012255-24012274 Msa0202040:intron 30.0%
!! TGACACTTTTTGAAAAGTGA+TGG + chr2_1:24012574-24012593 Msa0202040:intron 30.0%
!! AAATGTTAATTTGTGCCCTA+AGG + chr2_1:24012613-24012632 Msa0202040:intron 30.0%
!! AATGTTAATTTGTGCCCTAA+GGG + chr2_1:24012614-24012633 Msa0202040:intron 30.0%
! AAAAAATAGGTGAGGCATTA+AGG - chr2_1:24012854-24012873 None:intergenic 30.0%
GTCGTTATATGCTATTAACT+TGG - chr2_1:24013152-24013171 None:intergenic 30.0%
TAGAGAGAAAATGATGAAGA+TGG + chr2_1:24013407-24013426 Msa0202040:intron 30.0%
AGAGAGAAAATGATGAAGAT+GGG + chr2_1:24013408-24013427 Msa0202040:intron 30.0%
TCTTTCAGTTTCTTCATTGA+GGG - chr2_1:24013467-24013486 None:intergenic 30.0%
! TTTACGATATTGGTTAGAAG+TGG - chr2_1:24013600-24013619 None:intergenic 30.0%
TTAAACTCTGTGTATGAAAG+AGG - chr2_1:24013649-24013668 None:intergenic 30.0%
GTATTGAGTAGAGACTAAAA+TGG - chr2_1:24013918-24013937 None:intergenic 30.0%
CGTTAATATGATGAGTTTCT+AGG + chr2_1:24014180-24014199 Msa0202040:intron 30.0%
CAAATTCAAATCCACTTAGA+AGG - chr2_1:24014553-24014572 None:intergenic 30.0%
! CTTCTAAGTGGATTTGAATT+TGG + chr2_1:24014551-24014570 Msa0202040:intron 30.0%
TAAAGCTTCAATAATGGCAT+TGG + chr2_1:24014576-24014595 Msa0202040:intron 30.0%
CCACACCTATAAAAAGAAAA+TGG - chr2_1:24014627-24014646 None:intergenic 30.0%
! CCATTTTCTTTTTATAGGTG+TGG + chr2_1:24014624-24014643 Msa0202040:intron 30.0%
! TTTTCATACATAGTACGTCA+TGG - chr2_1:24014650-24014669 None:intergenic 30.0%
TACCAGTCCTACTATAATAA+TGG + chr2_1:24014748-24014767 Msa0202040:intron 30.0%
TTCCATTATTATAGTAGGAC+TGG - chr2_1:24014753-24014772 None:intergenic 30.0%
AGTTTATAAACTTTGTTCGC+TGG - chr2_1:24014869-24014888 None:intergenic 30.0%
AGCGAACAAAGTTTATAAAC+TGG + chr2_1:24014868-24014887 Msa0202040:intron 30.0%
TATTTGGGCAAAAAGAAGTA+TGG + chr2_1:24015002-24015021 Msa0202040:intron 30.0%
ATTAGAACCTCAAATGAAAG+AGG - chr2_1:24015136-24015155 None:intergenic 30.0%
! AAAAAAACACATTCTAAGGG+AGG + chr2_1:24015211-24015230 Msa0202040:intron 30.0%
! AAAAAACACATTCTAAGGGA+GGG + chr2_1:24015212-24015231 Msa0202040:intron 30.0%
GTGTTAAATGGTTAATGCAT+AGG - chr2_1:24015371-24015390 None:intergenic 30.0%
! GATTTAAGTTCATGCAAAGA+TGG - chr2_1:24015547-24015566 None:intergenic 30.0%
AACGCAAAACTACAATGTTT+CGG + chr2_1:24015603-24015622 Msa0202040:intron 30.0%
TGCTTATAAATGTAACTGGA+GGG - chr2_1:24015716-24015735 None:intergenic 30.0%
TTGCTTATAAATGTAACTGG+AGG - chr2_1:24015717-24015736 None:intergenic 30.0%
AAATATGAATTGACTGAGCT+CGG - chr2_1:24016000-24016019 None:intergenic 30.0%
AATTTCTCTCACTAGATCTA+AGG + chr2_1:24016166-24016185 Msa0202040:intron 30.0%
!!! TTTTTGGTTCACCAATTTAG+AGG + chr2_1:24016337-24016356 Msa0202040:intron 30.0%
!!! GTTTGGTTTTGGAAAAATTG+TGG + chr2_1:24016359-24016378 Msa0202040:intron 30.0%
! GAAAAATTGTGGCACAATTT+TGG + chr2_1:24016370-24016389 Msa0202040:intron 30.0%
CGAATGAATCTCTTCTTAAA+AGG - chr2_1:24016664-24016683 None:intergenic 30.0%
AAAAATACTAATCTCTCAGC+AGG + chr2_1:24016961-24016980 Msa0202040:intron 30.0%
CAGTTTCACATTCATTAAGA+TGG - chr2_1:24017373-24017392 None:intergenic 30.0%
! ATGTGGTAAGTTTCTTTTGA+GGG - chr2_1:24017443-24017462 None:intergenic 30.0%
! TATGTGGTAAGTTTCTTTTG+AGG - chr2_1:24017444-24017463 None:intergenic 30.0%
TGCAATAACCATCATTCATT+TGG + chr2_1:24017611-24017630 Msa0202040:intron 30.0%
!! TGTGTTAATTGGTGCTAAAT+AGG - chr2_1:24017675-24017694 None:intergenic 30.0%
ATAATATGCATCTCAATTCC+TGG + chr2_1:24017740-24017759 Msa0202040:intron 30.0%
TACAACAGCATAGTAAAAGA+TGG - chr2_1:24017819-24017838 None:intergenic 30.0%
!!! CATTTTAATTGTCCAATGTG+CGG + chr2_1:24017948-24017967 Msa0202040:intron 30.0%
ATCAATGACTTATATTGAGG+TGG - chr2_1:24018142-24018161 None:intergenic 30.0%
AATTGAGACATTCTATTTGG+TGG + chr2_1:24018594-24018613 Msa0202040:intron 30.0%
! TAAATGACACCTTTCTTTTG+AGG + chr2_1:24018624-24018643 Msa0202040:intron 30.0%
!! TGTATAACGGATAAACAGTA+TGG + chr2_1:24018778-24018797 Msa0202040:intron 30.0%
! GTGACAACTGCATTTTTAAC+CGG - chr2_1:24008958-24008977 None:intergenic 35.0%
AGACATCACCTTTAATTGTG+AGG - chr2_1:24009179-24009198 None:intergenic 35.0%
! TTTGAAGTTAAAGCCACTTC+TGG + chr2_1:24009198-24009217 Msa0202040:CDS 35.0%
AGAACAAAGTGGATATCACT+AGG + chr2_1:24009292-24009311 Msa0202040:CDS 35.0%
!!! TTGAAAGAGAGTGTCCTTTT+CGG - chr2_1:24009360-24009379 None:intergenic 35.0%
AAGGACACTCTCTTTCAAAT+TGG + chr2_1:24009362-24009381 Msa0202040:CDS 35.0%
GATTGTTGAAAGTTGTCTTG+TGG + chr2_1:24009492-24009511 Msa0202040:intron 35.0%
CATGATATTGTTCTTGTTGG+TGG + chr2_1:24009541-24009560 Msa0202040:intron 35.0%
CTATTGCGTAACTTCTTCAA+TGG + chr2_1:24009592-24009611 Msa0202040:CDS 35.0%
! CTACAATCAAGGCACTATAT+TGG - chr2_1:24009852-24009871 None:intergenic 35.0%
ATAGCAAAGCATACATCCAA+GGG - chr2_1:24009964-24009983 None:intergenic 35.0%
! TGCTTTGCTATCGATGAAAA+CGG + chr2_1:24009973-24009992 Msa0202040:CDS 35.0%
CGATAACCAATGACAAAGAA+AGG + chr2_1:24010049-24010068 Msa0202040:CDS 35.0%
GGATAACCTTTCTTTGTCAT+TGG - chr2_1:24010058-24010077 None:intergenic 35.0%
AGAATTTCTCATCTTCAGCA+TGG - chr2_1:24010122-24010141 None:intergenic 35.0%
!! GAGGAATGCTCTAAAGAATA+AGG + chr2_1:24010191-24010210 Msa0202040:CDS 35.0%
TGCTTCATAAGAATAACCAG+GGG + chr2_1:24010283-24010302 Msa0202040:CDS 35.0%
GAATGAAGTAGATGTTCTTG+AGG + chr2_1:24010305-24010324 Msa0202040:CDS 35.0%
TTCTTGAGGATCATCTGAAA+GGG + chr2_1:24010319-24010338 Msa0202040:CDS 35.0%
! ACAGTCTTTTAGCACAAGAT+TGG - chr2_1:24010549-24010568 None:intergenic 35.0%
TAACAAGATTGCCCAAATCA+TGG - chr2_1:24010574-24010593 None:intergenic 35.0%
TCTGCTCTAGTTAACCTATT+TGG + chr2_1:24010671-24010690 Msa0202040:intron 35.0%
GAATTGAAATGCCCAACATA+AGG + chr2_1:24010733-24010752 Msa0202040:intron 35.0%
TAAGGTGTGGAGAGATATAT+AGG + chr2_1:24010818-24010837 Msa0202040:intron 35.0%
ACTTGCATGTCATTGGAATA+AGG + chr2_1:24010860-24010879 Msa0202040:intron 35.0%
! TATGTCTTGTGTGTTTCTGT+TGG + chr2_1:24010988-24011007 Msa0202040:intron 35.0%
! ATGTCTTGTGTGTTTCTGTT+GGG + chr2_1:24010989-24011008 Msa0202040:intron 35.0%
TTTCACACCAATGACTGAAA+AGG - chr2_1:24011197-24011216 None:intergenic 35.0%
TCGTGGTCTAATTCCATTTA+AGG + chr2_1:24011243-24011262 Msa0202040:CDS 35.0%
! TTTTAAGCTCACCATGGAAA+TGG - chr2_1:24011274-24011293 None:intergenic 35.0%
! CTACAATTTTAAGCTCACCA+TGG - chr2_1:24011280-24011299 None:intergenic 35.0%
!! GTTCAATGAAAAGCACTACA+AGG - chr2_1:24011378-24011397 None:intergenic 35.0%
TACAAAAAGAGAATGAGGAC+AGG - chr2_1:24011508-24011527 None:intergenic 35.0%
ATATAAGGGGTCAAAATTGC+TGG - chr2_1:24011634-24011653 None:intergenic 35.0%
GTTTCCTCTGCATAAATAGT+TGG + chr2_1:24012120-24012139 Msa0202040:intron 35.0%
ACTACCAACTATTTATGCAG+AGG - chr2_1:24012127-24012146 None:intergenic 35.0%
ATGTTTCCTCAGCATAAACT+TGG + chr2_1:24012161-24012180 Msa0202040:intron 35.0%
GCATAAACTTGGAGGAAAAT+TGG + chr2_1:24012172-24012191 Msa0202040:intron 35.0%
TCAGACAACCAAATCACAAA+AGG + chr2_1:24012198-24012217 Msa0202040:intron 35.0%
AACCAAATCACAAAAGGACT+AGG + chr2_1:24012204-24012223 Msa0202040:intron 35.0%
! ATCCTAGTCCTTTTGTGATT+TGG - chr2_1:24012209-24012228 None:intergenic 35.0%
AGGATCGCTAAAAAATATGG+AGG + chr2_1:24012224-24012243 Msa0202040:intron 35.0%
TACCACTTTAACCAATTTGG+TGG + chr2_1:24012548-24012567 Msa0202040:intron 35.0%
ATTCCTTAACATGTACCCTA+AGG + chr2_1:24012743-24012762 Msa0202040:intron 35.0%
TTCCTTAACATGTACCCTAA+GGG + chr2_1:24012744-24012763 Msa0202040:intron 35.0%
AAGACTAAGACATCTCAACT+AGG - chr2_1:24012830-24012849 None:intergenic 35.0%
! TTTGATTCTCTGTCTTGTTG+CGG - chr2_1:24013298-24013317 None:intergenic 35.0%
GAGAGAAAATGATGAAGATG+GGG + chr2_1:24013409-24013428 Msa0202040:intron 35.0%
CTTTCAGTTTCTTCATTGAG+GGG - chr2_1:24013466-24013485 None:intergenic 35.0%
CTCTTTCAGTTTCTTCATTG+AGG - chr2_1:24013468-24013487 None:intergenic 35.0%
! TAGAGAGAAAAATCTAAGGC+CGG + chr2_1:24013494-24013513 Msa0202040:intron 35.0%
! AAAATCTAAGGCCGGTTTAA+TGG + chr2_1:24013502-24013521 Msa0202040:intron 35.0%
GTATGAAAGAGGTGGAAAAA+AGG - chr2_1:24013638-24013657 None:intergenic 35.0%
TAAAGGACGAATTGACATTG+AGG - chr2_1:24014009-24014028 None:intergenic 35.0%
TGTCGTGTCCTTTCAAATAT+GGG - chr2_1:24014039-24014058 None:intergenic 35.0%
TTGTCGTGTCCTTTCAAATA+TGG - chr2_1:24014040-24014059 None:intergenic 35.0%
TTACCTGATTGATGAATGAG+TGG - chr2_1:24014124-24014143 None:intergenic 35.0%
CACACGTACATAACTTATAC+TGG - chr2_1:24014233-24014252 None:intergenic 35.0%
! GAAAGTTGATTTAGGTAAGG+TGG + chr2_1:24014366-24014385 Msa0202040:intron 35.0%
TAATAGCAAACCCTTCTAAG+TGG + chr2_1:24014539-24014558 Msa0202040:intron 35.0%
GTACGGATATGTAATCTTCT+TGG - chr2_1:24014691-24014710 None:intergenic 35.0%
!! TATAGTTAGCTTGTTGGCTA+CGG - chr2_1:24014713-24014732 None:intergenic 35.0%
! AAAAGTGCACTTACAGTTAC+AGG + chr2_1:24014771-24014790 Msa0202040:intron 35.0%
AAAGTGCACTTACAGTTACA+GGG + chr2_1:24014772-24014791 Msa0202040:intron 35.0%
! GCAAAAAGAAGTATGGATGA+AGG + chr2_1:24015009-24015028 Msa0202040:intron 35.0%
!! AACCTCTTCTTTTCTAGGAA+CGG - chr2_1:24015044-24015063 None:intergenic 35.0%
! TCTACAACCTCTTCTTTTCT+AGG - chr2_1:24015049-24015068 None:intergenic 35.0%
TAGAAAAGAAGAGGTTGTAG+AGG + chr2_1:24015048-24015067 Msa0202040:intron 35.0%
AGAAAAGAAGAGGTTGTAGA+GGG + chr2_1:24015049-24015068 Msa0202040:intron 35.0%
TAGAGGGATGGTTAACTTTA+GGG + chr2_1:24015065-24015084 Msa0202040:intron 35.0%
GCTGAAAGAAAGAGATGAAT+AGG + chr2_1:24015103-24015122 Msa0202040:intron 35.0%
GTTGCCATACTTGTGTTAAA+TGG - chr2_1:24015383-24015402 None:intergenic 35.0%
TATGGCAACATGATAGAGTA+TGG + chr2_1:24015394-24015413 Msa0202040:intron 35.0%
TACTCAGACTCTATCAGATA+CGG - chr2_1:24015516-24015535 None:intergenic 35.0%
! ATCACCGTTTGTTGAAATCA+AGG + chr2_1:24015957-24015976 Msa0202040:intron 35.0%
AATATGAATTGACTGAGCTC+GGG - chr2_1:24015999-24016018 None:intergenic 35.0%
!! TGGTGTGAGTATTGGTTATT+TGG + chr2_1:24016037-24016056 Msa0202040:intron 35.0%
CCAAAACCAAACCTCTAAAT+TGG - chr2_1:24016351-24016370 None:intergenic 35.0%
!! CCAATTTAGAGGTTTGGTTT+TGG + chr2_1:24016348-24016367 Msa0202040:intron 35.0%
ATCATTTGACCCAATTGTTG+AGG + chr2_1:24016492-24016511 Msa0202040:intron 35.0%
TCATTTGACCCAATTGTTGA+GGG + chr2_1:24016493-24016512 Msa0202040:intron 35.0%
ACCAAATGAAGCAACTTCTA+AGG + chr2_1:24016536-24016555 Msa0202040:intron 35.0%
TCCTTAGAAGTTGCTTCATT+TGG - chr2_1:24016540-24016559 None:intergenic 35.0%
!! GAATTTTGGAGAACCAAAAG+AGG + chr2_1:24016614-24016633 Msa0202040:intron 35.0%
TAAGAAGAGATTCATTCGGT+TGG + chr2_1:24016666-24016685 Msa0202040:intron 35.0%
!! GTGTTGATCTTTTGACTATG+TGG - chr2_1:24017460-24017479 None:intergenic 35.0%
GGTTATTGCATGTGATTTGA+AGG - chr2_1:24017601-24017620 None:intergenic 35.0%
AAATATATGTCTGCAACACC+AGG - chr2_1:24017761-24017780 None:intergenic 35.0%
!!! AGGTTCAGCTTTTTTCAATG+TGG + chr2_1:24017922-24017941 Msa0202040:intron 35.0%
! TTGGTGTGAATAATTTGTGC+TGG + chr2_1:24017977-24017996 Msa0202040:intron 35.0%
! TACAACGATTTCTTGGTTCT+AGG + chr2_1:24018026-24018045 Msa0202040:intron 35.0%
TGGTGGTCCAAACTATAATT+TGG - chr2_1:24018098-24018117 None:intergenic 35.0%
! GTAAGTTGGAGCAATGTATT+TGG - chr2_1:24018118-24018137 None:intergenic 35.0%
TATATTGAGGTGGTGTAAGT+TGG - chr2_1:24018132-24018151 None:intergenic 35.0%
AGTCCAGACCATTAGAATAA+GGG - chr2_1:24018531-24018550 None:intergenic 35.0%
AAGTCCAGACCATTAGAATA+AGG - chr2_1:24018532-24018551 None:intergenic 35.0%
ACTTTCTCACCTCAAAAGAA+AGG - chr2_1:24018636-24018655 None:intergenic 35.0%
! ACACATTGGAACACGTATTT+TGG - chr2_1:24018676-24018695 None:intergenic 35.0%
! ATACGTGTTCCAATGTGTTT+TGG + chr2_1:24018678-24018697 Msa0202040:intron 35.0%
TTAGGGAAAACATTGTTGAC+GGG - chr2_1:24019218-24019237 None:intergenic 35.0%
CTTAGGGAAAACATTGTTGA+CGG - chr2_1:24019219-24019238 None:intergenic 35.0%
ACACCAGCAATAACCTTGAA+CGG - chr2_1:24008814-24008833 None:intergenic 40.0%
TAGTGTTAAGTACAAGGGTC+AGG + chr2_1:24008852-24008871 Msa0202040:CDS 40.0%
ATGAGATTTCCTCTGCACAA+AGG - chr2_1:24008885-24008904 None:intergenic 40.0%
TGTTGTCCTCACAAACATGA+AGG + chr2_1:24008906-24008925 Msa0202040:CDS 40.0%
CAATCTCCTTCATGTTTGTG+AGG - chr2_1:24008915-24008934 None:intergenic 40.0%
AAACATGAAGGAGATTGCAG+AGG + chr2_1:24008918-24008937 Msa0202040:CDS 40.0%
! AGAGGCTTATTTGGAATTGC+CGG + chr2_1:24008936-24008955 Msa0202040:CDS 40.0%
TTTGTCTTTGATCTTGGTGG+TGG + chr2_1:24009135-24009154 Msa0202040:CDS 40.0%
! TTGTCTTTGATCTTGGTGGT+GGG + chr2_1:24009136-24009155 Msa0202040:CDS 40.0%
GTGTCTCTCCTCACAATTAA+AGG + chr2_1:24009168-24009187 Msa0202040:CDS 40.0%
CTTCTTGTGAAAAGCCGAAA+AGG + chr2_1:24009343-24009362 Msa0202040:CDS 40.0%
TTATGAGTGTGGTGATTCCT+AGG + chr2_1:24009773-24009792 Msa0202040:CDS 40.0%
!! AAAGGTACAGAAGTGTTCCT+AGG - chr2_1:24009793-24009812 None:intergenic 40.0%
!! TATTGGCTGGTCTTCTTGAA+AGG - chr2_1:24009811-24009830 None:intergenic 40.0%
! TGCCTTGATTGTAGTTTGTG+AGG + chr2_1:24009858-24009877 Msa0202040:CDS 40.0%
! GCCTTGATTGTAGTTTGTGA+GGG + chr2_1:24009859-24009878 Msa0202040:CDS 40.0%
ACCCTCACAAACTACAATCA+AGG - chr2_1:24009863-24009882 None:intergenic 40.0%
GATAGCAAAGCATACATCCA+AGG - chr2_1:24009965-24009984 None:intergenic 40.0%
CATCTTAACTGTTTCAGCAG+AGG + chr2_1:24009996-24010015 Msa0202040:CDS 40.0%
GATCTCATTCTTACTTCCAG+TGG - chr2_1:24010028-24010047 None:intergenic 40.0%
GAAATTCTTAAGGAAGGCCA+AGG + chr2_1:24010134-24010153 Msa0202040:CDS 40.0%
ATGACTGCATCTACAAGTTG+AGG + chr2_1:24010172-24010191 Msa0202040:CDS 40.0%
GATCAATCGTGCAATAACTG+TGG + chr2_1:24010251-24010270 Msa0202040:CDS 40.0%
GTTCTTGAGGATCATCTGAA+AGG + chr2_1:24010318-24010337 Msa0202040:CDS 40.0%
GAACACCTTGTAATCAAGAC+TGG + chr2_1:24010357-24010376 Msa0202040:intron 40.0%
ACTAGCCAGTCTTGATTACA+AGG - chr2_1:24010365-24010384 None:intergenic 40.0%
!!! GACTGGCTAGTTTTCTTCAT+CGG + chr2_1:24010374-24010393 Msa0202040:intron 40.0%
AGGTTGGACAAAATTTGCAG+TGG + chr2_1:24010470-24010489 Msa0202040:intron 40.0%
! CTTTTAGCACAAGATTGGCA+TGG - chr2_1:24010544-24010563 None:intergenic 40.0%
TTTACAAAGCCAACCTCTTG+TGG + chr2_1:24010648-24010667 Msa0202040:intron 40.0%
GTAAAGCGGATCCTTATGTT+GGG - chr2_1:24010747-24010766 None:intergenic 40.0%
AGTAAAGCGGATCCTTATGT+TGG - chr2_1:24010748-24010767 None:intergenic 40.0%
CAGTGCAGTGTAGATGATTA+AGG + chr2_1:24010800-24010819 Msa0202040:intron 40.0%
CAGTGTAGATGATTAAGGTG+TGG + chr2_1:24010805-24010824 Msa0202040:intron 40.0%
TGTTGGGTCTGGCTATATAT+AGG + chr2_1:24011005-24011024 Msa0202040:intron 40.0%
ATTGGTGTGAAATCTAGCAC+CGG + chr2_1:24011205-24011224 Msa0202040:CDS 40.0%
! GGAAATGGAATGGCCTTAAA+TGG - chr2_1:24011259-24011278 None:intergenic 40.0%
TTAAGGCCATTCCATTTCCA+TGG + chr2_1:24011260-24011279 Msa0202040:CDS 40.0%
AGCACTACAAGGGAGTTTAA+GGG - chr2_1:24011367-24011386 None:intergenic 40.0%
AAGCACTACAAGGGAGTTTA+AGG - chr2_1:24011368-24011387 None:intergenic 40.0%
CATAAGCTTCTGACTTCTAG+AGG - chr2_1:24011426-24011445 None:intergenic 40.0%
GAATTTCATTCGCTCTCACA+TGG + chr2_1:24011825-24011844 Msa0202040:intron 40.0%
TTTCCTCAGCATAAACTTGG+AGG + chr2_1:24012164-24012183 Msa0202040:intron 40.0%
TTTCCTCCAAGTTTATGCTG+AGG - chr2_1:24012170-24012189 None:intergenic 40.0%
CACCACCAAATTGGTTAAAG+TGG - chr2_1:24012553-24012572 None:intergenic 40.0%
AAGTGTCAACACCACCAAAT+TGG - chr2_1:24012562-24012581 None:intergenic 40.0%
TTCCTTAACATGTGCCCTTA+GGG - chr2_1:24012631-24012650 None:intergenic 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr2_1:24012761-24012780 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr2_1:24012762-24012781 None:intergenic 40.0%
ATTTCGTTATCTGAGTGTGG+TGG - chr2_1:24013350-24013369 None:intergenic 40.0%
GTGATTTCGTTATCTGAGTG+TGG - chr2_1:24013353-24013372 None:intergenic 40.0%
! CTTCATTGAGGGGTAGTTTT+GGG - chr2_1:24013456-24013475 None:intergenic 40.0%
! TCTTCATTGAGGGGTAGTTT+TGG - chr2_1:24013457-24013476 None:intergenic 40.0%
AACTCTGTGTATGAAAGAGG+TGG - chr2_1:24013646-24013665 None:intergenic 40.0%
ACTCCACTCATTCATCAATC+AGG + chr2_1:24014118-24014137 Msa0202040:intron 40.0%
!! TTCAATAATGGCATTGGTCG+TGG + chr2_1:24014582-24014601 Msa0202040:intron 40.0%
!! ACCTCTTCTTTTCTAGGAAC+GGG - chr2_1:24015043-24015062 None:intergenic 40.0%
GTAGAGGGATGGTTAACTTT+AGG + chr2_1:24015064-24015083 Msa0202040:intron 40.0%
TGAGAACTGAGGACAAGTAA+GGG - chr2_1:24015467-24015486 None:intergenic 40.0%
ACTCTATCAGATACGGGAAA+GGG - chr2_1:24015509-24015528 None:intergenic 40.0%
ACTCAGACTCTATCAGATAC+GGG - chr2_1:24015515-24015534 None:intergenic 40.0%
GATTTCAACAAACGGTGATG+AGG - chr2_1:24015956-24015975 None:intergenic 40.0%
! TTGGCATGCTTTAAACACAG+TGG + chr2_1:24016056-24016075 Msa0202040:intron 40.0%
GGTTCACCAATTTAGAGGTT+TGG + chr2_1:24016342-24016361 Msa0202040:intron 40.0%
! TTGTGGCACAATTTTGGATC+AGG + chr2_1:24016376-24016395 Msa0202040:intron 40.0%
! AATCGTGACACGGTTTTACA+TGG + chr2_1:24016450-24016469 Msa0202040:intron 40.0%
TTCAAGCTCCCTCAACAATT+GGG - chr2_1:24016504-24016523 None:intergenic 40.0%
TTTCAAGCTCCCTCAACAAT+TGG - chr2_1:24016505-24016524 None:intergenic 40.0%
! GCAACTTCTAAGGAACTTAG+AGG + chr2_1:24016546-24016565 Msa0202040:intron 40.0%
GCTAAGAGTTGAGTGTCTTT+GGG + chr2_1:24016568-24016587 Msa0202040:intron 40.0%
!! TTTTGGAGAACCAAAAGAGG+TGG + chr2_1:24016617-24016636 Msa0202040:intron 40.0%
!! TCTTTTGAGGGATGACTATG+TGG - chr2_1:24017431-24017450 None:intergenic 40.0%
AGTTGGAGCAATGTATTTGG+TGG - chr2_1:24018115-24018134 None:intergenic 40.0%
!! GAATAAGGGTGCGTTTGTTT+TGG - chr2_1:24018517-24018536 None:intergenic 40.0%
CAAACGCACCCTTATTCTAA+TGG + chr2_1:24018520-24018539 Msa0202040:intron 40.0%
TTTCAAGCACACCACATTCT+TGG - chr2_1:24019037-24019056 None:intergenic 40.0%
CAAGAGGCCAACTGAAAAAT+AGG - chr2_1:24019160-24019179 None:intergenic 40.0%
GTCGTCGAAACTTAAGCTTA+GGG - chr2_1:24019235-24019254 None:intergenic 40.0%
TGTCGTCGAAACTTAAGCTT+AGG - chr2_1:24019236-24019255 None:intergenic 40.0%
AGCTTAAGTTTCGACGACAT+AGG + chr2_1:24019237-24019256 Msa0202040:CDS 40.0%
TATACTGTTGTGGCCGTTCA+AGG + chr2_1:24008798-24008817 Msa0202040:CDS 45.0%
GGAGATTGCAGAGGCTTATT+TGG + chr2_1:24008927-24008946 Msa0202040:CDS 45.0%
TATGCAATAGCTGCAGCAGT+GGG - chr2_1:24009072-24009091 None:intergenic 45.0%
ATATGCAATAGCTGCAGCAG+TGG - chr2_1:24009073-24009092 None:intergenic 45.0%
ACTGCTGCAGCTATTGCATA+TGG + chr2_1:24009072-24009091 Msa0202040:CDS 45.0%
! ACTTCTGGAAACACTCACCT+CGG + chr2_1:24009213-24009232 Msa0202040:CDS 45.0%
AGAAGTTCTCAACCTCCTCA+AGG - chr2_1:24009328-24009347 None:intergenic 45.0%
! GTCTAGGATTCCAAAAGTGC+AGG + chr2_1:24009567-24009586 Msa0202040:intron 45.0%
! CGCAATAGTTCCTGCACTTT+TGG - chr2_1:24009580-24009599 None:intergenic 45.0%
GCGTAACTTCTTCAATGGGA+AGG + chr2_1:24009597-24009616 Msa0202040:CDS 45.0%
CATAAGCAACAGCCTCATCA+GGG - chr2_1:24009642-24009661 None:intergenic 45.0%
! CTGATGAGGCTGTTGCTTAT+GGG + chr2_1:24009641-24009660 Msa0202040:CDS 45.0%
! TGATGAGGCTGTTGCTTATG+GGG + chr2_1:24009642-24009661 Msa0202040:CDS 45.0%
CGAGATACCAAGTGACAATG+GGG - chr2_1:24009737-24009756 None:intergenic 45.0%
CCGAGATACCAAGTGACAAT+GGG - chr2_1:24009738-24009757 None:intergenic 45.0%
! CCCATTGTCACTTGGTATCT+CGG + chr2_1:24009735-24009754 Msa0202040:CDS 45.0%
ACCGAGATACCAAGTGACAA+TGG - chr2_1:24009739-24009758 None:intergenic 45.0%
! TTGTAGTTTGTGAGGGTGAG+AGG + chr2_1:24009866-24009885 Msa0202040:CDS 45.0%
! TGTAGTTTGTGAGGGTGAGA+GGG + chr2_1:24009867-24009886 Msa0202040:CDS 45.0%
CAAAGCATACATCCAAGGGA+TGG - chr2_1:24009960-24009979 None:intergenic 45.0%
GAACATCTACTTCATTCCCC+TGG - chr2_1:24010302-24010321 None:intergenic 45.0%
! GAAAGGGCTTGAGAGTATGT+TGG + chr2_1:24010335-24010354 Msa0202040:intron 45.0%
TAACTAGAGCAGACCACAAG+AGG - chr2_1:24010664-24010683 None:intergenic 45.0%
! TTGTGTGTTTCTGTTGGGTC+TGG + chr2_1:24010994-24011013 Msa0202040:intron 45.0%
AGCTCACCATGGAAATGGAA+TGG - chr2_1:24011269-24011288 None:intergenic 45.0%
TATTTCCTTAACCAGTGCCC+CGG - chr2_1:24011889-24011908 None:intergenic 45.0%
TAGCTGCTTAATTAGTGCCC+CGG + chr2_1:24011999-24012018 Msa0202040:intron 45.0%
GTTCCTTAACATGTGCCCTT+AGG - chr2_1:24012632-24012651 None:intergenic 45.0%
TGCCCTTAGGGTACATGTTA+AGG - chr2_1:24012749-24012768 None:intergenic 45.0%
!! GTGTCGTTTGTCATCTTGTG+CGG - chr2_1:24013326-24013345 None:intergenic 45.0%
! TAAGGCCGGTTTAATGGAGA+GGG + chr2_1:24013508-24013527 Msa0202040:intron 45.0%
CATCTCCCTCTCCATTAAAC+CGG - chr2_1:24013516-24013535 None:intergenic 45.0%
GAGTCAACAACCTTGTGGAT+CGG - chr2_1:24014395-24014414 None:intergenic 45.0%
AAGTCGAGTCAACAACCTTG+TGG - chr2_1:24014400-24014419 None:intergenic 45.0%
CATTGGTCGTGGTTGTTCAA+TGG + chr2_1:24014593-24014612 Msa0202040:intron 45.0%
!! TTAGCTTGTTGGCTACGGTA+CGG - chr2_1:24014708-24014727 None:intergenic 45.0%
! GAAGTATGGATGAAGGCGTA+TGG + chr2_1:24015016-24015035 Msa0202040:intron 45.0%
TCCCGTTCCTAGAAAAGAAG+AGG + chr2_1:24015039-24015058 Msa0202040:intron 45.0%
AAGAAGAGGTTGTAGAGGGA+TGG + chr2_1:24015053-24015072 Msa0202040:intron 45.0%
! AAACACATTCTAAGGGAGGG+AGG + chr2_1:24015215-24015234 Msa0202040:intron 45.0%
! AACACATTCTAAGGGAGGGA+GGG + chr2_1:24015216-24015235 Msa0202040:intron 45.0%
GAGAACTGAGGACAAGTAAG+GGG - chr2_1:24015466-24015485 None:intergenic 45.0%
GTGAGAACTGAGGACAAGTA+AGG - chr2_1:24015468-24015487 None:intergenic 45.0%
TTTCATCCTCGTGAGAACTG+AGG - chr2_1:24015478-24015497 None:intergenic 45.0%
CTCTATCAGATACGGGAAAG+GGG - chr2_1:24015508-24015527 None:intergenic 45.0%
GACTCTATCAGATACGGGAA+AGG - chr2_1:24015510-24015529 None:intergenic 45.0%
! AATTTGTTTGCAAGCGGAGC+AGG + chr2_1:24015898-24015917 Msa0202040:intron 45.0%
GGTGATGAGGTGGGTAATTT+GGG - chr2_1:24015943-24015962 None:intergenic 45.0%
TCAACAAACGGTGATGAGGT+GGG - chr2_1:24015952-24015971 None:intergenic 45.0%
TTCAACAAACGGTGATGAGG+TGG - chr2_1:24015953-24015972 None:intergenic 45.0%
! TCATATTTTCCCCGTCGAAG+TGG + chr2_1:24016012-24016031 Msa0202040:intron 45.0%
AAGTGGAGTGGTGTGAGTAT+TGG + chr2_1:24016029-24016048 Msa0202040:intron 45.0%
GTTCCAAGCAAATCGTGACA+CGG + chr2_1:24016440-24016459 Msa0202040:intron 45.0%
! AAACCGTGTCACGATTTGCT+TGG - chr2_1:24016446-24016465 None:intergenic 45.0%
GAGGGAGCTTGAAAATCTCA+AGG + chr2_1:24016511-24016530 Msa0202040:intron 45.0%
GGCTAAGAGTTGAGTGTCTT+TGG + chr2_1:24016567-24016586 Msa0202040:intron 45.0%
CTGCTGCTCATGTCAAAACA+TGG + chr2_1:24017074-24017093 Msa0202040:intron 45.0%
AGGGATGACTATGTGGTAAG+TGG - chr2_1:24017424-24017443 None:intergenic 45.0%
GTGCACACGTGTTTCATGAT+TGG + chr2_1:24017705-24017724 Msa0202040:intron 45.0%
GCACCCTTATTCTAATGGTC+TGG + chr2_1:24018525-24018544 Msa0202040:intron 45.0%
ACATTGTTGACGGGAGTTAC+TGG - chr2_1:24019209-24019228 None:intergenic 45.0%
!!! CTTTAAAATTAAATATTATA+AGG - chr2_1:24012044-24012063 None:intergenic 5.0%
!! ATTTATAATGTATTATTAAT+AGG + chr2_1:24013837-24013856 Msa0202040:intron 5.0%
!! AAATACTAATATATAATAAA+AGG - chr2_1:24017258-24017277 None:intergenic 5.0%
!! ATTGATATATTATAAATTTA+GGG + chr2_1:24018156-24018175 Msa0202040:intron 5.0%
!! CAAATAAATTATAATTTAAT+CGG + chr2_1:24018752-24018771 Msa0202040:intron 5.0%
TGGCCGTTCAAGGTTATTGC+TGG + chr2_1:24008808-24008827 Msa0202040:CDS 50.0%
TTCTCAGCGAAAAGCCACCA+TGG + chr2_1:24008999-24009018 Msa0202040:CDS 50.0%
CACAACGTTAAGGCCAGCAA+TGG - chr2_1:24009034-24009053 None:intergenic 50.0%
GAGGTGAGTGTTTCCAGAAG+TGG - chr2_1:24009214-24009233 None:intergenic 50.0%
TATCAAAGTCCTCTCCTCCG+AGG - chr2_1:24009233-24009252 None:intergenic 50.0%
CTAGGAATCCAAGAGCCTTG+AGG + chr2_1:24009310-24009329 Msa0202040:CDS 50.0%
!! TTCTTGTTGGTGGCTCGTCT+AGG + chr2_1:24009551-24009570 Msa0202040:intron 50.0%
!! CAAGAGCATCAACCCTGATG+AGG + chr2_1:24009627-24009646 Msa0202040:CDS 50.0%
CCATAAGCAACAGCCTCATC+AGG - chr2_1:24009643-24009662 None:intergenic 50.0%
! CCTGATGAGGCTGTTGCTTA+TGG + chr2_1:24009640-24009659 Msa0202040:CDS 50.0%
CAAGCTGCTGTGTTGAGTGA+AGG + chr2_1:24009673-24009692 Msa0202040:CDS 50.0%
GACGTTACCCCATTGTCACT+TGG + chr2_1:24009727-24009746 Msa0202040:CDS 50.0%
GTGAGTGACAACAACGTGCT+TGG + chr2_1:24009895-24009914 Msa0202040:CDS 50.0%
ACGAGGAACACTTGGAAGAC+CGG - chr2_1:24009935-24009954 None:intergenic 50.0%
TCAGCAGAGGAAAGATCCAC+TGG + chr2_1:24010009-24010028 Msa0202040:CDS 50.0%
TAGAGCAGACCACAAGAGGT+TGG - chr2_1:24010660-24010679 None:intergenic 50.0%
!! ACGAGCACTATGCTGCTTTC+CGG - chr2_1:24011227-24011246 None:intergenic 50.0%
GGAAATGTTAACCAGTGCCC+CGG + chr2_1:24011867-24011886 Msa0202040:intron 50.0%
GAAATGTTAACCAGTGCCCC+GGG + chr2_1:24011868-24011887 Msa0202040:intron 50.0%
AAATGTTAACCAGTGCCCCG+GGG + chr2_1:24011869-24011888 Msa0202040:intron 50.0%
ATTTCCTTAACCAGTGCCCC+GGG - chr2_1:24011888-24011907 None:intergenic 50.0%
TCTTGTTAACCGATGCCTCC+GGG - chr2_1:24012020-24012039 None:intergenic 50.0%
! GTCTTGTTAACCGATGCCTC+CGG - chr2_1:24012021-24012040 None:intergenic 50.0%
! TGCCCTAAGGGCACATGTTA+AGG + chr2_1:24012626-24012645 Msa0202040:intron 50.0%
GATCGGAATACACATGCCTC+AGG + chr2_1:24013207-24013226 Msa0202040:intron 50.0%
CGTGAAAGTTGCAGATCCTG+AGG - chr2_1:24013226-24013245 None:intergenic 50.0%
! CTAAGGCCGGTTTAATGGAG+AGG + chr2_1:24013507-24013526 Msa0202040:intron 50.0%
AAGGTGGTAACCGATCCACA+AGG + chr2_1:24014382-24014401 Msa0202040:intron 50.0%
CTGTGCTAGAGGATCAAGCA+AGG - chr2_1:24014841-24014860 None:intergenic 50.0%
TGCTTGATCCTCTAGCACAG+TGG + chr2_1:24014841-24014860 Msa0202040:intron 50.0%
! ACACATTCTAAGGGAGGGAG+GGG + chr2_1:24015217-24015236 Msa0202040:intron 50.0%
TTCTATGTCGACGAACCCGA+TGG + chr2_1:24015429-24015448 Msa0202040:intron 50.0%
TCTATGTCGACGAACCCGAT+GGG + chr2_1:24015430-24015449 Msa0202040:intron 50.0%
AGGGGATACTCAAACCCCAT+CGG - chr2_1:24015448-24015467 None:intergenic 50.0%
ACTTGTCCTCAGTTCTCACG+AGG + chr2_1:24015469-24015488 Msa0202040:intron 50.0%
CGGTGATGAGGTGGGTAATT+TGG - chr2_1:24015944-24015963 None:intergenic 50.0%
CTGAGCTCGGGTTCGATTAA+TGG - chr2_1:24015987-24016006 None:intergenic 50.0%
TGTGTACGAGCTCCAAATCG+TGG + chr2_1:24016414-24016433 Msa0202040:intron 50.0%
! TTCGAAGAGGCCACCTCTTT+TGG - chr2_1:24016630-24016649 None:intergenic 50.0%
AAGAGGTGGCCTCTTCGAAA+AGG + chr2_1:24016631-24016650 Msa0202040:intron 50.0%
AGAGGTGGCCTCTTCGAAAA+GGG + chr2_1:24016632-24016651 Msa0202040:intron 50.0%
GTCCAATGTGCGGTGAAGTT+TGG + chr2_1:24017958-24017977 Msa0202040:intron 50.0%
CACCAAACTTCACCGCACAT+TGG - chr2_1:24017963-24017982 None:intergenic 50.0%
! TTTCAGTTGGCCTCTTGCTG+TGG + chr2_1:24019163-24019182 Msa0202040:intron 50.0%
AACTTCCCAACCACAGCAAG+AGG - chr2_1:24019176-24019195 None:intergenic 50.0%
TTGACGGGAGTTACTGGTAC+TGG - chr2_1:24019203-24019222 None:intergenic 50.0%
GGAGAAGCTCCTTTGTGCAG+AGG + chr2_1:24008873-24008892 Msa0202040:CDS 55.0%
CGAAAAGCCACCATGGATGC+TGG + chr2_1:24009006-24009025 Msa0202040:CDS 55.0%
AATGGCACCAGCATCCATGG+TGG - chr2_1:24009016-24009035 None:intergenic 55.0%
AGCAATGGCACCAGCATCCA+TGG - chr2_1:24009019-24009038 None:intergenic 55.0%
!! ATGGATGCTGGTGCCATTGC+TGG + chr2_1:24009018-24009037 Msa0202040:CDS 55.0%
TCTGGAAACACTCACCTCGG+AGG + chr2_1:24009216-24009235 Msa0202040:CDS 55.0%
AAACACTCACCTCGGAGGAG+AGG + chr2_1:24009221-24009240 Msa0202040:CDS 55.0%
GGAATCCAAGAGCCTTGAGG+AGG + chr2_1:24009313-24009332 Msa0202040:CDS 55.0%
CTCAACCTCCTCAAGGCTCT+TGG - chr2_1:24009321-24009340 None:intergenic 55.0%
ACGTCTCGCAGCACCAAGTT+TGG - chr2_1:24009712-24009731 None:intergenic 55.0%
GGTCTTCCAAGTGTTCCTCG+TGG + chr2_1:24009934-24009953 Msa0202040:CDS 55.0%
GGAAAGCAGCATAGTGCTCG+TGG + chr2_1:24011226-24011245 Msa0202040:CDS 55.0%
TTTCCTTAACCAGTGCCCCG+GGG - chr2_1:24011887-24011906 None:intergenic 55.0%
CTGCTTAATTAGTGCCCCGG+AGG + chr2_1:24012002-24012021 Msa0202040:intron 55.0%
! AATTAGTGCCCCGGAGGCAT+CGG + chr2_1:24012008-24012027 Msa0202040:intron 55.0%
CTTGTTAACCGATGCCTCCG+GGG - chr2_1:24012019-24012038 None:intergenic 55.0%
CGCGCGACCTCTTTCATTTG+AGG + chr2_1:24015126-24015145 Msa0202040:intron 55.0%
! CACATTCTAAGGGAGGGAGG+GGG + chr2_1:24015218-24015237 Msa0202040:intron 55.0%
CTATGTCGACGAACCCGATG+GGG + chr2_1:24015431-24015450 Msa0202040:intron 55.0%
GGGGATACTCAAACCCCATC+GGG - chr2_1:24015447-24015466 None:intergenic 55.0%
TTTGCAAGCGGAGCAGGTTC+AGG + chr2_1:24015904-24015923 Msa0202040:intron 55.0%
TTGCAAGCGGAGCAGGTTCA+GGG + chr2_1:24015905-24015924 Msa0202040:intron 55.0%
! TTTTCCCCGTCGAAGTGGAG+TGG + chr2_1:24016017-24016036 Msa0202040:intron 55.0%
TCACACCACTCCACTTCGAC+GGG - chr2_1:24016025-24016044 None:intergenic 55.0%
CTCACACCACTCCACTTCGA+CGG - chr2_1:24016026-24016045 None:intergenic 55.0%
GTGGCCTCTTCGAAAAGGGT+TGG + chr2_1:24016636-24016655 Msa0202040:intron 55.0%
! GGCACCAACCCTTTTCGAAG+AGG - chr2_1:24016643-24016662 None:intergenic 55.0%
! AGTTGGCCTCTTGCTGTGGT+TGG + chr2_1:24019167-24019186 Msa0202040:intron 55.0%
! GTTGGCCTCTTGCTGTGGTT+GGG + chr2_1:24019168-24019187 Msa0202040:intron 55.0%
GGATGGCCACGAGGAACACT+TGG - chr2_1:24009943-24009962 None:intergenic 60.0%
TGTTCCTCGTGGCCATCCCT+TGG + chr2_1:24009945-24009964 Msa0202040:CDS 60.0%
ACATCCAAGGGATGGCCACG+AGG - chr2_1:24009952-24009971 None:intergenic 60.0%
! ATTCTAAGGGAGGGAGGGGG+AGG + chr2_1:24015221-24015240 Msa0202040:intron 60.0%
! TTCTAAGGGAGGGAGGGGGA+GGG + chr2_1:24015222-24015241 Msa0202040:intron 60.0%
AAGCGGAGCAGGTTCAGGGT+GGG + chr2_1:24015909-24015928 Msa0202040:intron 60.0%
CACACCACTCCACTTCGACG+GGG - chr2_1:24016024-24016043 None:intergenic 60.0%
GCTTGGAACGCGCCACGATT+TGG - chr2_1:24016429-24016448 None:intergenic 60.0%
!! CGCTGGCTCCACTGTGCTAG+AGG - chr2_1:24014852-24014871 None:intergenic 65.0%
TCTAAGGGAGGGAGGGGGAG+GGG + chr2_1:24015223-24015242 Msa0202040:intron 65.0%
CAAGCGGAGCAGGTTCAGGG+TGG + chr2_1:24015908-24015927 Msa0202040:intron 65.0%
TAACCAGTGCCCCGGGGCAC+TGG + chr2_1:24011875-24011894 Msa0202040:intron 70.0%
TAACCAGTGCCCCGGGGCAC+TGG - chr2_1:24011875-24011894 None:intergenic 70.0%
!! GTGCCCCGGGGCACTGGTTA+AGG + chr2_1:24011881-24011900 Msa0202040:intron 70.0%
CTAAGGGAGGGAGGGGGAGG+GGG + chr2_1:24015224-24015243 Msa0202040:intron 70.0%
TAAGGGAGGGAGGGGGAGGG+GGG + chr2_1:24015225-24015244 Msa0202040:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 24008691 24019280 24008691 ID=Msa0202040;Name=Msa0202040
chr2_1 mRNA 24008691 24019280 24008691 ID=Msa0202040-mRNA-1;Parent=Msa0202040;Name=Msa0202040-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.5|1|1|4|0|589
chr2_1 exon 24008691 24009484 24008691 ID=Msa0202040-mRNA-1:exon:9288;Parent=Msa0202040-mRNA-1
chr2_1 exon 24009573 24010348 24009573 ID=Msa0202040-mRNA-1:exon:9289;Parent=Msa0202040-mRNA-1
chr2_1 exon 24011194 24011281 24011194 ID=Msa0202040-mRNA-1:exon:9290;Parent=Msa0202040-mRNA-1
chr2_1 exon 24019169 24019280 24019169 ID=Msa0202040-mRNA-1:exon:9291;Parent=Msa0202040-mRNA-1
chr2_1 CDS 24008691 24009484 24008691 ID=Msa0202040-mRNA-1:cds;Parent=Msa0202040-mRNA-1
chr2_1 CDS 24009573 24010348 24009573 ID=Msa0202040-mRNA-1:cds;Parent=Msa0202040-mRNA-1
chr2_1 CDS 24011194 24011281 24011194 ID=Msa0202040-mRNA-1:cds;Parent=Msa0202040-mRNA-1
chr2_1 CDS 24019169 24019280 24019169 ID=Msa0202040-mRNA-1:cds;Parent=Msa0202040-mRNA-1
Gene Sequence

>Msa0202040

ATGTTAAAAAGACAGGTGAATGATGAGAATTTATTATTAATATTTTTTTCTTCAGATACTAAGAGGTTAATTGGTAGGAAATTTAGTGATTACGTTGTTCAAAAAGATATACTGTTGTGGCCGTTCAAGGTTATTGCTGGTGTTAATGACAAACCTACGATTAGTGTTAAGTACAAGGGTCAGGAGAAGCTCCTTTGTGCAGAGGAAATCTCATCTGTTGTCCTCACAAACATGAAGGAGATTGCAGAGGCTTATTTGGAATTGCCGGTTAAAAATGCAGTTGTCACCGTTCCTGCTTATTTTAACGATTCTCAGCGAAAAGCCACCATGGATGCTGGTGCCATTGCTGGCCTTAACGTTGTGAAGATAATCAATGAACCCACTGCTGCAGCTATTGCATATGGCCTTGACAAAAGAAGTAATTGTGATGGTGAAAGAAATATTTTTGTCTTTGATCTTGGTGGTGGGACTTTTGATGTGTCTCTCCTCACAATTAAAGGTGATGTCTTTGAAGTTAAAGCCACTTCTGGAAACACTCACCTCGGAGGAGAGGACTTTGATAACAGAATGTTGAACTACTTTGTGCAAGAATTTAATAGGAAGAACAAAGTGGATATCACTAGGAATCCAAGAGCCTTGAGGAGGTTGAGAACTTCTTGTGAAAAGCCGAAAAGGACACTCTCTTTCAAATTGGTCACCACTATTGAGATTGATTATTTATATGAGGACATTGACTTCTCTACATCAATCACTCGTGTCAAGTTTGAAGAAATCAACATGGACCTTTTTAATGAGATTCCAAAAGTGCAGGAACTATTGCGTAACTTCTTCAATGGGAAGGAGTTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGGGCAGCTGTGCAAGCTGCTGTGTTGAGTGAAGGCATTAAGAATGTTCCAAACTTGGTGCTGCGAGACGTTACCCCATTGTCACTTGGTATCTCGGTACATAATGATTGTATTATGAGTGTGGTGATTCCTAGGAACACTTCTGTACCTTTCAAGAAGACCAGCCAATATCTTACTTCTAAAGATAACCAATATAGTGCCTTGATTGTAGTTTGTGAGGGTGAGAGGGCAAGAGTGAGTGACAACAACGTGCTTGGTTTTTTCAATCTTTCCGGTCTTCCAAGTGTTCCTCGTGGCCATCCCTTGGATGTATGCTTTGCTATCGATGAAAACGGCATCTTAACTGTTTCAGCAGAGGAAAGATCCACTGGAAGTAAGAATGAGATCACGATAACCAATGACAAAGAAAGGTTATCCAGAGTCGAAATTGAAAAATTGATTCAAGAATCTAAGGAGTACCATGCTGAAGATGAGAAATTCTTAAGGAAGGCCAAGGTAATGAATGCATTAGATGACTGCATCTACAAGTTGAGGAATGCTCTAAAGAATAAGGATGTCAAATTAAAGCTCTCTTCTCAAAAGAATAAAAAGATCAATCGTGCAATAACTGTGGCTAAAGATTTGCTTCATAAGAATAACCAGGGGAATGAAGTAGATGTTCTTGAGGATCATCTGAAAGGGCTTGAGACCTTTTCAGTCATTGGTGTGAAATCTAGCACCGGAAAGCAGCATAGTGCTCGTGGTCTAATTCCATTTAAGGCCATTCCATTTCCATGTTGGCCTCTTGCTGTGGTTGGGAAGTTGATACCAGTACCAGTAACTCCCGTCAACAATGTTTTCCCTAAGCTTAAGTTTCGACGACATAGGCAACCTGAGCCTTCTCAATAG
Protein sequence

>Msa0202040

MLKRQVNDENLLLIFFSSDTKRLIGRKFSDYVVQKDILLWPFKVIAGVNDKPTISVKYKGQEKLLCAEEISSVVLTNMKEIAEAYLELPVKNAVVTVPAYFNDSQRKATMDAGAIAGLNVVKIINEPTAAAIAYGLDKRSNCDGERNIFVFDLGGGTFDVSLLTIKGDVFEVKATSGNTHLGGEDFDNRMLNYFVQEFNRKNKVDITRNPRALRRLRTSCEKPKRTLSFKLVTTIEIDYLYEDIDFSTSITRVKFEEINMDLFNEIPKVQELLRNFFNGKELCKSINPDEAVAYGAAVQAAVLSEGIKNVPNLVLRDVTPLSLGISVHNDCIMSVVIPRNTSVPFKKTSQYLTSKDNQYSALIVVCEGERARVSDNNVLGFFNLSGLPSVPRGHPLDVCFAIDENGILTVSAEERSTGSKNEITITNDKERLSRVEIEKLIQESKEYHAEDEKFLRKAKVMNALDDCIYKLRNALKNKDVKLKLSSQKNKKINRAITVAKDLLHKNNQGNEVDVLEDHLKGLETFSVIGVKSSTGKQHSARGLIPFKAIPFPCWPLAVVGKLIPVPVTPVNNVFPKLKFRRHRQPEPSQ*