AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0288120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0288120 MtrunA17_Chr2g0305901 98.160 489 9 0 1 489 1 489 0.0 951
Msa0288120 MtrunA17_Chr4g0020881 54.886 481 187 4 24 487 31 498 0.0 524
Msa0288120 MtrunA17_Chr4g0055641 55.236 487 207 4 3 489 2 477 4.60e-175 501
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0288120 AT2G13100.4 72.746 488 128 2 4 489 2 486 0.0 714
Msa0288120 AT2G13100.1 72.746 488 128 2 4 489 2 486 0.0 714
Msa0288120 AT3G47420.2 54.076 503 209 4 1 487 5 501 0.0 519
Msa0288120 AT3G47420.1 54.076 503 209 4 1 487 5 501 0.0 519
Msa0288120 AT3G47420.3 54.076 503 209 4 1 487 5 501 0.0 519
Msa0288120 AT1G30560.1 51.230 488 216 3 16 489 10 489 3.37e-177 507
Msa0288120 AT4G17550.1 51.233 527 215 4 1 486 1 526 2.13e-175 504
Msa0288120 AT4G25220.1 52.826 460 204 2 30 489 36 482 1.70e-171 493
Msa0288120 AT2G13100.2 73.092 249 64 1 241 489 89 334 2.37e-124 366
Msa0288120 AT2G13100.2 70.732 82 24 0 4 85 2 83 3.96e-32 126
Msa0288120 AT2G13100.3 77.982 218 48 0 272 489 83 300 2.47e-117 347
Msa0288120 AT2G13100.3 67.045 88 29 0 4 91 2 89 8.97e-33 127

Find 143 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGTGTGCCTTATGTAAA+AGG 0.150951 2_3:-32185070 None:intergenic
GAGATAAGAGAGAAGCTTTC+AGG 0.214056 2_3:+32185691 Msa0288120:CDS
TAGAGATTCTAATTTAATTT+AGG 0.214934 2_3:+32184073 Msa0288120:five_prime_UTR
TTACTCCATTGGCATGTATT+TGG 0.217319 2_3:+32184420 Msa0288120:CDS
ATCACCTTGATGTTTCTTTC+TGG 0.224719 2_3:+32185412 Msa0288120:CDS
TGTTGGCACCAAATCTTAAA+TGG 0.258521 2_3:-32184000 None:intergenic
TTGAGGTTGTTTCTTGTGTT+TGG 0.258719 2_3:+32184469 Msa0288120:CDS
TTCCATCACCATTTAAGATT+TGG 0.266246 2_3:+32183992 Msa0288120:five_prime_UTR
CCTTGTGTTGTTGCAGTTGT+TGG 0.271567 2_3:+32184613 Msa0288120:CDS
CAGTTGTTGGGAATTGGCTT+GGG 0.271735 2_3:+32184626 Msa0288120:CDS
TAGTATTGTTAAAAGTGTTC+TGG 0.280648 2_3:+32184291 Msa0288120:CDS
TGATAATAAGAACACATATT+TGG 0.281967 2_3:-32184225 None:intergenic
GATATAGGGTTTGCGAGTTC+TGG 0.287830 2_3:+32184832 Msa0288120:CDS
TTCTTTGTTGCAGCGGTTGC+TGG 0.290700 2_3:+32185193 Msa0288120:intron
GGTTATTGCTTCGGGTGTTT+TGG 0.290922 2_3:+32184717 Msa0288120:CDS
ATCAAAGAGGGGATTGATAA+TGG 0.292694 2_3:+32184651 Msa0288120:CDS
GTTCCTCGAGTTCCATTAAA+AGG 0.293143 2_3:-32184358 None:intergenic
TCAAATTCTTCGTCTGCTAT+TGG 0.299829 2_3:+32184952 Msa0288120:CDS
TTGCTTACACTTTCTTGTAT+TGG 0.304564 2_3:+32185043 Msa0288120:CDS
AAAACCTTTGCGTGGAAAAC+CGG 0.307123 2_3:-32183925 None:intergenic
CATTGGTTCGGTTATTGCTT+CGG 0.314100 2_3:+32184708 Msa0288120:CDS
CTTTCAACAATATTTGATAT+TGG 0.314253 2_3:+32185247 Msa0288120:CDS
TGTGGAGTGTTTCAGTCAAT+TGG 0.315612 2_3:+32184586 Msa0288120:CDS
TGAGGTTGTTTCTTGTGTTT+GGG 0.335721 2_3:+32184470 Msa0288120:CDS
TGGTTTGATGTTCATGTGTT+GGG 0.336491 2_3:+32184538 Msa0288120:CDS
GCTTTAGTGGTGGGAATTCT+CGG 0.342732 2_3:+32185500 Msa0288120:CDS
AACCAATTCAACCCTTGATT+CGG 0.343395 2_3:+32184327 Msa0288120:CDS
GGTTCTGTTGGAGCTGCTCT+TGG 0.349690 2_3:+32185559 Msa0288120:CDS
CACATATTTGGTGGAATAGT+AGG 0.350389 2_3:-32184213 None:intergenic
TCTTAAATGGTGATGGAAAT+TGG 0.355213 2_3:-32183987 None:intergenic
GGGGATTGATAATGGGGATA+TGG 0.364452 2_3:+32184659 Msa0288120:CDS
ACCAATTCAACCCTTGATTC+GGG 0.365317 2_3:+32184328 Msa0288120:CDS
GGTTGGTCATTTGTGGTGCC+TGG 0.368976 2_3:+32184751 Msa0288120:CDS
TCAAAGAGGGGATTGATAAT+GGG 0.369497 2_3:+32184652 Msa0288120:CDS
ACCCGAATCAAGGGTTGAAT+TGG 0.376330 2_3:-32184329 None:intergenic
TTGTGAATCCGGTGGATATA+GGG 0.382740 2_3:+32184818 Msa0288120:CDS
CTCGGTACGCAGGGCTTTAG+TGG 0.382958 2_3:+32185487 Msa0288120:CDS
GCAGTTGTTGGGAATTGGCT+TGG 0.384000 2_3:+32184625 Msa0288120:CDS
GTTTCTTGTGTTTGGGATGG+TGG 0.396297 2_3:+32184477 Msa0288120:CDS
GATTCCATTCTTTACTCATC+AGG 0.400763 2_3:-32184121 None:intergenic
TGGATGGGGTTGGTCATTTG+TGG 0.400932 2_3:+32184744 Msa0288120:CDS
TTGTTGCAGTTGTTGGGAAT+TGG 0.403901 2_3:+32184620 Msa0288120:CDS
GTTGTGAATCCGGTGGATAT+AGG 0.410528 2_3:+32184817 Msa0288120:CDS
TCCATTGGCATGTATTTGGC+TGG 0.414022 2_3:+32184424 Msa0288120:CDS
TGGCTGGTCATGTTGGTGAT+AGG 0.414837 2_3:+32184440 Msa0288120:CDS
ATTGGTTCGGTTATTGCTTC+GGG 0.416295 2_3:+32184709 Msa0288120:CDS
AGTATTGTTAAAAGTGTTCT+GGG 0.416808 2_3:+32184292 Msa0288120:CDS
CTTGTGTTGTTGCAGTTGTT+GGG 0.419466 2_3:+32184614 Msa0288120:CDS
GAATTTGAAATCGAACTATC+AGG 0.420709 2_3:-32184937 None:intergenic
ACCTCGGTTGGGAATATCAT+TGG 0.423859 2_3:+32184691 Msa0288120:CDS
TCTGTTTCTTGTTGTGAATC+CGG 0.429267 2_3:+32184807 Msa0288120:CDS
CTGGTTTGATGTTCATGTGT+TGG 0.438300 2_3:+32184537 Msa0288120:CDS
AACACGACTTACAAGATTGT+TGG 0.442880 2_3:-32184017 None:intergenic
TTTCTTACTTCTTACTCCAT+TGG 0.444854 2_3:+32184409 Msa0288120:CDS
ACTGTTACTGCAATCATTGA+TGG 0.445070 2_3:+32185532 Msa0288120:CDS
AATCTATCTCACAAAACTGC+TGG 0.446010 2_3:+32185220 Msa0288120:CDS
GTGGAGTGTTTCAGTCAATT+GGG 0.451035 2_3:+32184587 Msa0288120:CDS
GGTTGGGAATATCATTGGTT+CGG 0.456341 2_3:+32184696 Msa0288120:CDS
AGCAGGTTATGTTTCAACTA+GGG 0.460785 2_3:+32185591 Msa0288120:CDS
TTTGATATTGGAGGAGTCCT+AGG 0.461363 2_3:+32185259 Msa0288120:CDS
GTCGGTGTTCAGATTGTTTG+TGG 0.462172 2_3:+32184568 Msa0288120:CDS
AACCGGGTTGTGTTCAGATC+GGG 0.473949 2_3:-32183908 None:intergenic
TGGAATTCGCATACCTCGGT+TGG 0.474948 2_3:+32184679 Msa0288120:CDS
ATGCTTCCTTTCATGCATCT+AGG 0.475318 2_3:+32184260 Msa0288120:CDS
CACAGATTTGATTATAGTCT+AGG 0.479247 2_3:+32185739 Msa0288120:three_prime_UTR
GGCTGCCGATCTCGGTACGC+AGG 0.479417 2_3:+32185477 Msa0288120:CDS
TGGAGCTAGGCTCAAACTCT+TGG 0.480620 2_3:-32184149 None:intergenic
CTTTAGTGGTGGGAATTCTC+GGG 0.483451 2_3:+32185501 Msa0288120:CDS
ATTGGCTTGGGGAATCAAAG+AGG 0.486300 2_3:+32184638 Msa0288120:CDS
ACTGCTGTGGCTGCCGATCT+CGG 0.489455 2_3:+32185469 Msa0288120:CDS
TAGCAGGTTATGTTTCAACT+AGG 0.490938 2_3:+32185590 Msa0288120:CDS
CACCAAATCTTAAATGGTGA+TGG 0.493676 2_3:-32183994 None:intergenic
TGGTGGGAATTCTCGGGCAC+TGG 0.495438 2_3:+32185507 Msa0288120:CDS
AAGGCGGCCAACCCGAATCA+AGG 0.499130 2_3:-32184339 None:intergenic
TTTCTTGTGTTTGGGATGGT+GGG 0.499647 2_3:+32184478 Msa0288120:CDS
GAAATTGGTGAGAGCAAGAG+AGG 0.501444 2_3:-32183972 None:intergenic
AAACCTTTGCGTGGAAAACC+GGG 0.501724 2_3:-32183924 None:intergenic
ACTCGAGGAACTCGCCGGCT+TGG 0.503481 2_3:+32184370 Msa0288120:CDS
CCTGTGTGCCTTATGTAAAA+GGG 0.507027 2_3:-32185069 None:intergenic
AATCATATCAGAAATGAAAC+CGG 0.508019 2_3:-32185293 None:intergenic
TCAACAATATTTGATATTGG+AGG 0.508821 2_3:+32185250 Msa0288120:CDS
GGTACGCAGGGCTTTAGTGG+TGG 0.512487 2_3:+32185490 Msa0288120:CDS
ACTGCAATCATTGATGGTAC+TGG 0.512877 2_3:+32185538 Msa0288120:CDS
TATTCTTGATTCAAGTTGCA+AGG 0.512896 2_3:+32185665 Msa0288120:CDS
AAAGCCCTGCGTACCGAGAT+CGG 0.516139 2_3:-32185482 None:intergenic
GTTGTTTCTTGTGTTTGGGA+TGG 0.516674 2_3:+32184474 Msa0288120:CDS
GCACGATACAAAAGCAGAGC+TGG 0.518122 2_3:-32185361 None:intergenic
GAATCAAGGGTTGAATTGGT+TGG 0.521050 2_3:-32184325 None:intergenic
GTGTTTGGGATGGTGGGCAG+CGG 0.524244 2_3:+32184484 Msa0288120:CDS
ACATATTTGGTGGAATAGTA+GGG 0.524391 2_3:-32184212 None:intergenic
AGGAACTCGCCGGCTTGGCG+AGG 0.524885 2_3:+32184375 Msa0288120:CDS
GAAACATAACCTGCTAAAAG+TGG 0.525372 2_3:-32185583 None:intergenic
AGGGTTTGCGAGTTCTGGAA+TGG 0.526746 2_3:+32184837 Msa0288120:CDS
GTTGAATTGGTTGGAACTGT+GGG 0.528850 2_3:-32184316 None:intergenic
GGAATTCGCATACCTCGGTT+GGG 0.531280 2_3:+32184680 Msa0288120:CDS
GAATCGATAGAAACAAGAAC+AGG 0.531762 2_3:-32185339 None:intergenic
CAAAGAGGGGATTGATAATG+GGG 0.532878 2_3:+32184653 Msa0288120:CDS
CGAGATCAACCTCGCCAAGC+CGG 0.534196 2_3:-32184384 None:intergenic
GAATCCTGATGAGTAAAGAA+TGG 0.534223 2_3:+32184117 Msa0288120:exon
GTACGCAGGGCTTTAGTGGT+GGG 0.535609 2_3:+32185491 Msa0288120:CDS
TTAGAGGCGTGGAAAATACC+TGG 0.539044 2_3:+32184979 Msa0288120:CDS
ATCTATCTCACAAAACTGCT+GGG 0.540237 2_3:+32185221 Msa0288120:CDS
ATTCAACCCTTGATTCGGGT+TGG 0.543048 2_3:+32184332 Msa0288120:CDS
AGTTGTTGGGAATTGGCTTG+GGG 0.544754 2_3:+32184627 Msa0288120:CDS
ATGGAACTCGAGGAACTCGC+CGG 0.545124 2_3:+32184365 Msa0288120:CDS
AGAGATTCAGAGCTGGAGCT+AGG 0.548429 2_3:-32184162 None:intergenic
TAATAAGAACACATATTTGG+TGG 0.548927 2_3:-32184222 None:intergenic
GCTGCCGATCTCGGTACGCA+GGG 0.553404 2_3:+32185478 Msa0288120:CDS
AAACCGGGTTGTGTTCAGAT+CGG 0.553649 2_3:-32183909 None:intergenic
AAAGCAAACGGAGCGACTCC+AGG 0.556148 2_3:-32184997 None:intergenic
GGTTGAATTGGTTGGAACTG+TGG 0.556170 2_3:-32184317 None:intergenic
GCAGGTTATGTTTCAACTAG+GGG 0.557122 2_3:+32185592 Msa0288120:CDS
GCAGTTGTAATTAGCGAGTA+CGG 0.564151 2_3:-32185451 None:intergenic
ATTGATGGTACTGGTTCTGT+TGG 0.568619 2_3:+32185547 Msa0288120:CDS
AATTGAAATGAGTGTTGAAA+CGG 0.573546 2_3:+32184861 Msa0288120:CDS
AGGCTTCCTAGATGCATGAA+AGG 0.573970 2_3:-32184266 None:intergenic
GTCCTAGGCGGAATCACCGC+CGG 0.574884 2_3:+32185274 Msa0288120:CDS
GGTTTGATGTTCATGTGTTG+GGG 0.575219 2_3:+32184539 Msa0288120:CDS
TTGGCTTGGGGAATCAAAGA+GGG 0.575740 2_3:+32184639 Msa0288120:CDS
ATGTATTTGGCTGGTCATGT+TGG 0.577593 2_3:+32184433 Msa0288120:CDS
TTTGGAAAGAGATTCAGAGC+TGG 0.577955 2_3:-32184169 None:intergenic
CCAACAACTGCAACAACACA+AGG 0.578535 2_3:-32184613 None:intergenic
GTTATGTTTCAACTAGGGGA+TGG 0.578568 2_3:+32185596 Msa0288120:CDS
AAATCCAGAAAGAAACATCA+AGG 0.579928 2_3:-32185416 None:intergenic
ACGAAAATGATCAAAACTCC+AGG 0.581492 2_3:-32184769 None:intergenic
AGCCCGATCTGAACACAACC+CGG 0.596321 2_3:+32183906 Msa0288120:five_prime_UTR
CTCGCAAACCCTATATCCAC+CGG 0.599278 2_3:-32184826 None:intergenic
TGTTGAAACGGACGGTGCAG+AGG 0.599722 2_3:+32184873 Msa0288120:CDS
TCTGCAGAAAGTCGAATCAG+AGG 0.600067 2_3:+32184897 Msa0288120:CDS
AGGCGGCCAACCCGAATCAA+GGG 0.601656 2_3:-32184338 None:intergenic
ACCAGCCAAATACATGCCAA+TGG 0.609265 2_3:-32184425 None:intergenic
CTCGCTAATTACAACTGCTG+TGG 0.611850 2_3:+32185456 Msa0288120:CDS
TTGGTGATAGGATTGATTTG+AGG 0.616292 2_3:+32184452 Msa0288120:CDS
GATATGGAATTCGCATACCT+CGG 0.635544 2_3:+32184675 Msa0288120:CDS
GAGTGTTTCAGTCAATTGGG+TGG 0.653771 2_3:+32184590 Msa0288120:CDS
AACCGGCGGTGATTCCGCCT+AGG 0.658420 2_3:-32185276 None:intergenic
GTTTCTTGTTGTGAATCCGG+TGG 0.666770 2_3:+32184810 Msa0288120:CDS
CCTCGAGTTCCATTAAAAGG+CGG 0.667716 2_3:-32184355 None:intergenic
ACCAATGATATTCCCAACCG+AGG 0.672100 2_3:-32184692 None:intergenic
TGGCTTGGGGAATCAAAGAG+GGG 0.677167 2_3:+32184640 Msa0288120:CDS
CATATCAGAAATGAAACCGG+CGG 0.690344 2_3:-32185290 None:intergenic
GATATTGGAGGAGTCCTAGG+CGG 0.710383 2_3:+32185262 Msa0288120:CDS
GAAATGAGTGTTGAAACGGA+CGG 0.783866 2_3:+32184865 Msa0288120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGAGATTCTAATTTAATTT+AGG + chr2_3:32184073-32184092 Msa0288120:five_prime_UTR 15.0%
!!! TAGAGATTCTAATTTAATTT+AGG + chr2_3:32184073-32184092 Msa0288120:five_prime_UTR 15.0%
!! TGATAATAAGAACACATATT+TGG - chr2_3:32184228-32184247 None:intergenic 20.0%
!!! GTTTTTTTACGATACTTTTT+GGG + chr2_3:32184506-32184525 Msa0288120:CDS 20.0%
!! AACGTAAACTAAATAAGATA+TGG - chr2_3:32185153-32185172 None:intergenic 20.0%
!! CTTTCAACAATATTTGATAT+TGG + chr2_3:32185247-32185266 Msa0288120:CDS 20.0%
!!! GTTATTGATGAAGAAATTTT+TGG + chr2_3:32185807-32185826 Msa0288120:three_prime_UTR 20.0%
!! ACCTTTAATAAAAATGTCTA+CGG + chr2_3:32185884-32185903 Msa0288120:three_prime_UTR 20.0%
!! TGATAATAAGAACACATATT+TGG - chr2_3:32184228-32184247 None:intergenic 20.0%
!!! GTTTTTTTACGATACTTTTT+GGG + chr2_3:32184506-32184525 Msa0288120:CDS 20.0%
!! AACGTAAACTAAATAAGATA+TGG - chr2_3:32185153-32185172 None:intergenic 20.0%
!! CTTTCAACAATATTTGATAT+TGG + chr2_3:32185247-32185266 Msa0288120:CDS 20.0%
!!! GTTATTGATGAAGAAATTTT+TGG + chr2_3:32185807-32185826 Msa0288120:three_prime_UTR 20.0%
!! ACCTTTAATAAAAATGTCTA+CGG + chr2_3:32185884-32185903 Msa0288120:three_prime_UTR 20.0%
! AAAAAAAAAAAACCTTTGCG+TGG - chr2_3:32183936-32183955 None:intergenic 25.0%
! TAATAAGAACACATATTTGG+TGG - chr2_3:32184225-32184244 None:intergenic 25.0%
!! AGAACACTTTTAACAATACT+AGG - chr2_3:32184292-32184311 None:intergenic 25.0%
!!! TAGTATTGTTAAAAGTGTTC+TGG + chr2_3:32184291-32184310 Msa0288120:CDS 25.0%
!!! AGTATTGTTAAAAGTGTTCT+GGG + chr2_3:32184292-32184311 Msa0288120:CDS 25.0%
!!! GGTTTTTTTACGATACTTTT+TGG + chr2_3:32184505-32184524 Msa0288120:CDS 25.0%
!!! AATTGAAATGAGTGTTGAAA+CGG + chr2_3:32184861-32184880 Msa0288120:CDS 25.0%
! AAAAAGAGACAAAAAGCAAA+CGG - chr2_3:32185012-32185031 None:intergenic 25.0%
! TCAACAATATTTGATATTGG+AGG + chr2_3:32185250-32185269 Msa0288120:CDS 25.0%
! AATCATATCAGAAATGAAAC+CGG - chr2_3:32185296-32185315 None:intergenic 25.0%
!! ACCGTAGACATTTTTATTAA+AGG - chr2_3:32185888-32185907 None:intergenic 25.0%
! AAAAAAAAAAAACCTTTGCG+TGG - chr2_3:32183936-32183955 None:intergenic 25.0%
! TAATAAGAACACATATTTGG+TGG - chr2_3:32184225-32184244 None:intergenic 25.0%
!! AGAACACTTTTAACAATACT+AGG - chr2_3:32184292-32184311 None:intergenic 25.0%
!!! TAGTATTGTTAAAAGTGTTC+TGG + chr2_3:32184291-32184310 Msa0288120:CDS 25.0%
!!! AGTATTGTTAAAAGTGTTCT+GGG + chr2_3:32184292-32184311 Msa0288120:CDS 25.0%
!!! GGTTTTTTTACGATACTTTT+TGG + chr2_3:32184505-32184524 Msa0288120:CDS 25.0%
!!! AATTGAAATGAGTGTTGAAA+CGG + chr2_3:32184861-32184880 Msa0288120:CDS 25.0%
! AAAAAGAGACAAAAAGCAAA+CGG - chr2_3:32185012-32185031 None:intergenic 25.0%
! TCAACAATATTTGATATTGG+AGG + chr2_3:32185250-32185269 Msa0288120:CDS 25.0%
! AATCATATCAGAAATGAAAC+CGG - chr2_3:32185296-32185315 None:intergenic 25.0%
!! ACCGTAGACATTTTTATTAA+AGG - chr2_3:32185888-32185907 None:intergenic 25.0%
!! TCTTAAATGGTGATGGAAAT+TGG - chr2_3:32183990-32184009 None:intergenic 30.0%
! TTCCATCACCATTTAAGATT+TGG + chr2_3:32183992-32184011 Msa0288120:five_prime_UTR 30.0%
! CGTGTTTTCATCTTCAATTT+TGG + chr2_3:32184034-32184053 Msa0288120:five_prime_UTR 30.0%
! ACATATTTGGTGGAATAGTA+GGG - chr2_3:32184215-32184234 None:intergenic 30.0%
! ACACTTTTAACAATACTAGG+AGG - chr2_3:32184289-32184308 None:intergenic 30.0%
TTTCTTACTTCTTACTCCAT+TGG + chr2_3:32184409-32184428 Msa0288120:CDS 30.0%
!!! TTTACGATACTTTTTGGGTT+AGG + chr2_3:32184511-32184530 Msa0288120:CDS 30.0%
!! GAGTTTTGATCATTTTCGTT+GGG + chr2_3:32184773-32184792 Msa0288120:CDS 30.0%
!! AGTTTTGATCATTTTCGTTG+GGG + chr2_3:32184774-32184793 Msa0288120:CDS 30.0%
! GAATTTGAAATCGAACTATC+AGG - chr2_3:32184940-32184959 None:intergenic 30.0%
TTGCTTACACTTTCTTGTAT+TGG + chr2_3:32185043-32185062 Msa0288120:CDS 30.0%
! ATTGGTTACCCTTTTACATA+AGG + chr2_3:32185061-32185080 Msa0288120:CDS 30.0%
AAATCCAGAAAGAAACATCA+AGG - chr2_3:32185419-32185438 None:intergenic 30.0%
! GATGTTTCTTTCTGGATTTT+TGG + chr2_3:32185420-32185439 Msa0288120:CDS 30.0%
! GTTTCTTCTATTTTCTTTGC+TGG + chr2_3:32185640-32185659 Msa0288120:CDS 30.0%
!! TATTCTTGATTCAAGTTGCA+AGG + chr2_3:32185665-32185684 Msa0288120:CDS 30.0%
CACAGATTTGATTATAGTCT+AGG + chr2_3:32185739-32185758 Msa0288120:three_prime_UTR 30.0%
!! TCTTAAATGGTGATGGAAAT+TGG - chr2_3:32183990-32184009 None:intergenic 30.0%
! TTCCATCACCATTTAAGATT+TGG + chr2_3:32183992-32184011 Msa0288120:five_prime_UTR 30.0%
! CGTGTTTTCATCTTCAATTT+TGG + chr2_3:32184034-32184053 Msa0288120:five_prime_UTR 30.0%
! ACATATTTGGTGGAATAGTA+GGG - chr2_3:32184215-32184234 None:intergenic 30.0%
! ACACTTTTAACAATACTAGG+AGG - chr2_3:32184289-32184308 None:intergenic 30.0%
TTTCTTACTTCTTACTCCAT+TGG + chr2_3:32184409-32184428 Msa0288120:CDS 30.0%
!!! TTTACGATACTTTTTGGGTT+AGG + chr2_3:32184511-32184530 Msa0288120:CDS 30.0%
!! GAGTTTTGATCATTTTCGTT+GGG + chr2_3:32184773-32184792 Msa0288120:CDS 30.0%
!! AGTTTTGATCATTTTCGTTG+GGG + chr2_3:32184774-32184793 Msa0288120:CDS 30.0%
! GAATTTGAAATCGAACTATC+AGG - chr2_3:32184940-32184959 None:intergenic 30.0%
TTGCTTACACTTTCTTGTAT+TGG + chr2_3:32185043-32185062 Msa0288120:CDS 30.0%
! ATTGGTTACCCTTTTACATA+AGG + chr2_3:32185061-32185080 Msa0288120:CDS 30.0%
AAATCCAGAAAGAAACATCA+AGG - chr2_3:32185419-32185438 None:intergenic 30.0%
! GATGTTTCTTTCTGGATTTT+TGG + chr2_3:32185420-32185439 Msa0288120:CDS 30.0%
! GTTTCTTCTATTTTCTTTGC+TGG + chr2_3:32185640-32185659 Msa0288120:CDS 30.0%
!! TATTCTTGATTCAAGTTGCA+AGG + chr2_3:32185665-32185684 Msa0288120:CDS 30.0%
CACAGATTTGATTATAGTCT+AGG + chr2_3:32185739-32185758 Msa0288120:three_prime_UTR 30.0%
CACCAAATCTTAAATGGTGA+TGG - chr2_3:32183997-32184016 None:intergenic 35.0%
TGTTGGCACCAAATCTTAAA+TGG - chr2_3:32184003-32184022 None:intergenic 35.0%
AACACGACTTACAAGATTGT+TGG - chr2_3:32184020-32184039 None:intergenic 35.0%
GAATCCTGATGAGTAAAGAA+TGG + chr2_3:32184117-32184136 Msa0288120:exon 35.0%
GATTCCATTCTTTACTCATC+AGG - chr2_3:32184124-32184143 None:intergenic 35.0%
! CACATATTTGGTGGAATAGT+AGG - chr2_3:32184216-32184235 None:intergenic 35.0%
AACCAATTCAACCCTTGATT+CGG + chr2_3:32184327-32184346 Msa0288120:CDS 35.0%
TTACTCCATTGGCATGTATT+TGG + chr2_3:32184420-32184439 Msa0288120:CDS 35.0%
!! TTGGTGATAGGATTGATTTG+AGG + chr2_3:32184452-32184471 Msa0288120:CDS 35.0%
!! TTGAGGTTGTTTCTTGTGTT+TGG + chr2_3:32184469-32184488 Msa0288120:CDS 35.0%
!! TGAGGTTGTTTCTTGTGTTT+GGG + chr2_3:32184470-32184489 Msa0288120:CDS 35.0%
!!! TACTTTTTGGGTTAGGATAC+TGG + chr2_3:32184518-32184537 Msa0288120:CDS 35.0%
TGGTTTGATGTTCATGTGTT+GGG + chr2_3:32184538-32184557 Msa0288120:CDS 35.0%
ATCAAAGAGGGGATTGATAA+TGG + chr2_3:32184651-32184670 Msa0288120:CDS 35.0%
! TCAAAGAGGGGATTGATAAT+GGG + chr2_3:32184652-32184671 Msa0288120:CDS 35.0%
ACGAAAATGATCAAAACTCC+AGG - chr2_3:32184772-32184791 None:intergenic 35.0%
!! GGAGTTTTGATCATTTTCGT+TGG + chr2_3:32184772-32184791 Msa0288120:CDS 35.0%
! TCTGTTTCTTGTTGTGAATC+CGG + chr2_3:32184807-32184826 Msa0288120:CDS 35.0%
TCAAATTCTTCGTCTGCTAT+TGG + chr2_3:32184952-32184971 Msa0288120:CDS 35.0%
!! GTCTGCTATTGGATTTTTAG+AGG + chr2_3:32184963-32184982 Msa0288120:CDS 35.0%
TATGATGTTCTTTGTTGCAG+CGG + chr2_3:32185186-32185205 Msa0288120:intron 35.0%
AATCTATCTCACAAAACTGC+TGG + chr2_3:32185220-32185239 Msa0288120:CDS 35.0%
ATCTATCTCACAAAACTGCT+GGG + chr2_3:32185221-32185240 Msa0288120:CDS 35.0%
GAATCGATAGAAACAAGAAC+AGG - chr2_3:32185342-32185361 None:intergenic 35.0%
ATCACCTTGATGTTTCTTTC+TGG + chr2_3:32185412-32185431 Msa0288120:CDS 35.0%
!!! CTTTCTGGATTTTTGGTGAA+TGG + chr2_3:32185427-32185446 Msa0288120:CDS 35.0%
ACTGTTACTGCAATCATTGA+TGG + chr2_3:32185532-32185551 Msa0288120:CDS 35.0%
GAAACATAACCTGCTAAAAG+TGG - chr2_3:32185586-32185605 None:intergenic 35.0%
TAGCAGGTTATGTTTCAACT+AGG + chr2_3:32185590-32185609 Msa0288120:CDS 35.0%
AGCAGGTTATGTTTCAACTA+GGG + chr2_3:32185591-32185610 Msa0288120:CDS 35.0%
CACCAAATCTTAAATGGTGA+TGG - chr2_3:32183997-32184016 None:intergenic 35.0%
TGTTGGCACCAAATCTTAAA+TGG - chr2_3:32184003-32184022 None:intergenic 35.0%
AACACGACTTACAAGATTGT+TGG - chr2_3:32184020-32184039 None:intergenic 35.0%
GAATCCTGATGAGTAAAGAA+TGG + chr2_3:32184117-32184136 Msa0288120:exon 35.0%
GATTCCATTCTTTACTCATC+AGG - chr2_3:32184124-32184143 None:intergenic 35.0%
! CACATATTTGGTGGAATAGT+AGG - chr2_3:32184216-32184235 None:intergenic 35.0%
AACCAATTCAACCCTTGATT+CGG + chr2_3:32184327-32184346 Msa0288120:CDS 35.0%
TTACTCCATTGGCATGTATT+TGG + chr2_3:32184420-32184439 Msa0288120:CDS 35.0%
!! TTGGTGATAGGATTGATTTG+AGG + chr2_3:32184452-32184471 Msa0288120:CDS 35.0%
!! TTGAGGTTGTTTCTTGTGTT+TGG + chr2_3:32184469-32184488 Msa0288120:CDS 35.0%
!! TGAGGTTGTTTCTTGTGTTT+GGG + chr2_3:32184470-32184489 Msa0288120:CDS 35.0%
!!! TACTTTTTGGGTTAGGATAC+TGG + chr2_3:32184518-32184537 Msa0288120:CDS 35.0%
TGGTTTGATGTTCATGTGTT+GGG + chr2_3:32184538-32184557 Msa0288120:CDS 35.0%
ATCAAAGAGGGGATTGATAA+TGG + chr2_3:32184651-32184670 Msa0288120:CDS 35.0%
! TCAAAGAGGGGATTGATAAT+GGG + chr2_3:32184652-32184671 Msa0288120:CDS 35.0%
ACGAAAATGATCAAAACTCC+AGG - chr2_3:32184772-32184791 None:intergenic 35.0%
!! GGAGTTTTGATCATTTTCGT+TGG + chr2_3:32184772-32184791 Msa0288120:CDS 35.0%
! TCTGTTTCTTGTTGTGAATC+CGG + chr2_3:32184807-32184826 Msa0288120:CDS 35.0%
TCAAATTCTTCGTCTGCTAT+TGG + chr2_3:32184952-32184971 Msa0288120:CDS 35.0%
!! GTCTGCTATTGGATTTTTAG+AGG + chr2_3:32184963-32184982 Msa0288120:CDS 35.0%
TATGATGTTCTTTGTTGCAG+CGG + chr2_3:32185186-32185205 Msa0288120:intron 35.0%
AATCTATCTCACAAAACTGC+TGG + chr2_3:32185220-32185239 Msa0288120:CDS 35.0%
ATCTATCTCACAAAACTGCT+GGG + chr2_3:32185221-32185240 Msa0288120:CDS 35.0%
GAATCGATAGAAACAAGAAC+AGG - chr2_3:32185342-32185361 None:intergenic 35.0%
ATCACCTTGATGTTTCTTTC+TGG + chr2_3:32185412-32185431 Msa0288120:CDS 35.0%
!!! CTTTCTGGATTTTTGGTGAA+TGG + chr2_3:32185427-32185446 Msa0288120:CDS 35.0%
ACTGTTACTGCAATCATTGA+TGG + chr2_3:32185532-32185551 Msa0288120:CDS 35.0%
GAAACATAACCTGCTAAAAG+TGG - chr2_3:32185586-32185605 None:intergenic 35.0%
TAGCAGGTTATGTTTCAACT+AGG + chr2_3:32185590-32185609 Msa0288120:CDS 35.0%
AGCAGGTTATGTTTCAACTA+GGG + chr2_3:32185591-32185610 Msa0288120:CDS 35.0%
AAAACCTTTGCGTGGAAAAC+CGG - chr2_3:32183928-32183947 None:intergenic 40.0%
TTTGGAAAGAGATTCAGAGC+TGG - chr2_3:32184172-32184191 None:intergenic 40.0%
!! AATAGTAGGGTTTTGTGAGG+GGG - chr2_3:32184202-32184221 None:intergenic 40.0%
!! GAATAGTAGGGTTTTGTGAG+GGG - chr2_3:32184203-32184222 None:intergenic 40.0%
!! GGAATAGTAGGGTTTTGTGA+GGG - chr2_3:32184204-32184223 None:intergenic 40.0%
!! TGGAATAGTAGGGTTTTGTG+AGG - chr2_3:32184205-32184224 None:intergenic 40.0%
ATGCTTCCTTTCATGCATCT+AGG + chr2_3:32184260-32184279 Msa0288120:CDS 40.0%
GTTGAATTGGTTGGAACTGT+GGG - chr2_3:32184319-32184338 None:intergenic 40.0%
GAATCAAGGGTTGAATTGGT+TGG - chr2_3:32184328-32184347 None:intergenic 40.0%
ACCAATTCAACCCTTGATTC+GGG + chr2_3:32184328-32184347 Msa0288120:CDS 40.0%
GTTCCTCGAGTTCCATTAAA+AGG - chr2_3:32184361-32184380 None:intergenic 40.0%
! ATGTATTTGGCTGGTCATGT+TGG + chr2_3:32184433-32184452 Msa0288120:CDS 40.0%
!! GTTGTTTCTTGTGTTTGGGA+TGG + chr2_3:32184474-32184493 Msa0288120:CDS 40.0%
! TTTCTTGTGTTTGGGATGGT+GGG + chr2_3:32184478-32184497 Msa0288120:CDS 40.0%
! CTGGTTTGATGTTCATGTGT+TGG + chr2_3:32184537-32184556 Msa0288120:CDS 40.0%
GGTTTGATGTTCATGTGTTG+GGG + chr2_3:32184539-32184558 Msa0288120:CDS 40.0%
!!! CATGTGTTGGGGTTTTTTGT+CGG + chr2_3:32184550-32184569 Msa0288120:CDS 40.0%
! TGTGGAGTGTTTCAGTCAAT+TGG + chr2_3:32184586-32184605 Msa0288120:CDS 40.0%
! GTGGAGTGTTTCAGTCAATT+GGG + chr2_3:32184587-32184606 Msa0288120:CDS 40.0%
! CTTGTGTTGTTGCAGTTGTT+GGG + chr2_3:32184614-32184633 Msa0288120:CDS 40.0%
TTGTTGCAGTTGTTGGGAAT+TGG + chr2_3:32184620-32184639 Msa0288120:CDS 40.0%
!! CAAAGAGGGGATTGATAATG+GGG + chr2_3:32184653-32184672 Msa0288120:CDS 40.0%
GATATGGAATTCGCATACCT+CGG + chr2_3:32184675-32184694 Msa0288120:CDS 40.0%
! GGTTGGGAATATCATTGGTT+CGG + chr2_3:32184696-32184715 Msa0288120:CDS 40.0%
!! CATTGGTTCGGTTATTGCTT+CGG + chr2_3:32184708-32184727 Msa0288120:CDS 40.0%
!! ATTGGTTCGGTTATTGCTTC+GGG + chr2_3:32184709-32184728 Msa0288120:CDS 40.0%
!!! GGGTGTTTTGGAATTTGGAT+GGG + chr2_3:32184729-32184748 Msa0288120:CDS 40.0%
!!! GGTGTTTTGGAATTTGGATG+GGG + chr2_3:32184730-32184749 Msa0288120:CDS 40.0%
!!! TTTTGGAATTTGGATGGGGT+TGG + chr2_3:32184734-32184753 Msa0288120:CDS 40.0%
! GATCATTTTCGTTGGGGTTT+TGG + chr2_3:32184780-32184799 Msa0288120:CDS 40.0%
TTGTGAATCCGGTGGATATA+GGG + chr2_3:32184818-32184837 Msa0288120:CDS 40.0%
!! GAAATGAGTGTTGAAACGGA+CGG + chr2_3:32184865-32184884 Msa0288120:CDS 40.0%
!! CTATTGGATTTTTAGAGGCG+TGG + chr2_3:32184968-32184987 Msa0288120:CDS 40.0%
CCTGTGTGCCTTATGTAAAA+GGG - chr2_3:32185072-32185091 None:intergenic 40.0%
ACCTGTGTGCCTTATGTAAA+AGG - chr2_3:32185073-32185092 None:intergenic 40.0%
TTTGATATTGGAGGAGTCCT+AGG + chr2_3:32185259-32185278 Msa0288120:CDS 40.0%
CATATCAGAAATGAAACCGG+CGG - chr2_3:32185293-32185312 None:intergenic 40.0%
!! CTGCTTTTGTATCGTGCTTT+CGG + chr2_3:32185367-32185386 Msa0288120:CDS 40.0%
! TGCTTTTGTATCGTGCTTTC+GGG + chr2_3:32185368-32185387 Msa0288120:CDS 40.0%
GCAGTTGTAATTAGCGAGTA+CGG - chr2_3:32185454-32185473 None:intergenic 40.0%
! ACTGCAATCATTGATGGTAC+TGG + chr2_3:32185538-32185557 Msa0288120:CDS 40.0%
!! ATTGATGGTACTGGTTCTGT+TGG + chr2_3:32185547-32185566 Msa0288120:CDS 40.0%
GCAGGTTATGTTTCAACTAG+GGG + chr2_3:32185592-32185611 Msa0288120:CDS 40.0%
GTTATGTTTCAACTAGGGGA+TGG + chr2_3:32185596-32185615 Msa0288120:CDS 40.0%
GAGATAAGAGAGAAGCTTTC+AGG + chr2_3:32185691-32185710 Msa0288120:CDS 40.0%
AAAACCTTTGCGTGGAAAAC+CGG - chr2_3:32183928-32183947 None:intergenic 40.0%
TTTGGAAAGAGATTCAGAGC+TGG - chr2_3:32184172-32184191 None:intergenic 40.0%
!! AATAGTAGGGTTTTGTGAGG+GGG - chr2_3:32184202-32184221 None:intergenic 40.0%
!! GAATAGTAGGGTTTTGTGAG+GGG - chr2_3:32184203-32184222 None:intergenic 40.0%
!! GGAATAGTAGGGTTTTGTGA+GGG - chr2_3:32184204-32184223 None:intergenic 40.0%
!! TGGAATAGTAGGGTTTTGTG+AGG - chr2_3:32184205-32184224 None:intergenic 40.0%
ATGCTTCCTTTCATGCATCT+AGG + chr2_3:32184260-32184279 Msa0288120:CDS 40.0%
GTTGAATTGGTTGGAACTGT+GGG - chr2_3:32184319-32184338 None:intergenic 40.0%
GAATCAAGGGTTGAATTGGT+TGG - chr2_3:32184328-32184347 None:intergenic 40.0%
ACCAATTCAACCCTTGATTC+GGG + chr2_3:32184328-32184347 Msa0288120:CDS 40.0%
GTTCCTCGAGTTCCATTAAA+AGG - chr2_3:32184361-32184380 None:intergenic 40.0%
! ATGTATTTGGCTGGTCATGT+TGG + chr2_3:32184433-32184452 Msa0288120:CDS 40.0%
!! GTTGTTTCTTGTGTTTGGGA+TGG + chr2_3:32184474-32184493 Msa0288120:CDS 40.0%
! TTTCTTGTGTTTGGGATGGT+GGG + chr2_3:32184478-32184497 Msa0288120:CDS 40.0%
! CTGGTTTGATGTTCATGTGT+TGG + chr2_3:32184537-32184556 Msa0288120:CDS 40.0%
GGTTTGATGTTCATGTGTTG+GGG + chr2_3:32184539-32184558 Msa0288120:CDS 40.0%
!!! CATGTGTTGGGGTTTTTTGT+CGG + chr2_3:32184550-32184569 Msa0288120:CDS 40.0%
! TGTGGAGTGTTTCAGTCAAT+TGG + chr2_3:32184586-32184605 Msa0288120:CDS 40.0%
! GTGGAGTGTTTCAGTCAATT+GGG + chr2_3:32184587-32184606 Msa0288120:CDS 40.0%
! CTTGTGTTGTTGCAGTTGTT+GGG + chr2_3:32184614-32184633 Msa0288120:CDS 40.0%
TTGTTGCAGTTGTTGGGAAT+TGG + chr2_3:32184620-32184639 Msa0288120:CDS 40.0%
!! CAAAGAGGGGATTGATAATG+GGG + chr2_3:32184653-32184672 Msa0288120:CDS 40.0%
GATATGGAATTCGCATACCT+CGG + chr2_3:32184675-32184694 Msa0288120:CDS 40.0%
! GGTTGGGAATATCATTGGTT+CGG + chr2_3:32184696-32184715 Msa0288120:CDS 40.0%
!! CATTGGTTCGGTTATTGCTT+CGG + chr2_3:32184708-32184727 Msa0288120:CDS 40.0%
!! ATTGGTTCGGTTATTGCTTC+GGG + chr2_3:32184709-32184728 Msa0288120:CDS 40.0%
!!! GGGTGTTTTGGAATTTGGAT+GGG + chr2_3:32184729-32184748 Msa0288120:CDS 40.0%
!!! GGTGTTTTGGAATTTGGATG+GGG + chr2_3:32184730-32184749 Msa0288120:CDS 40.0%
!!! TTTTGGAATTTGGATGGGGT+TGG + chr2_3:32184734-32184753 Msa0288120:CDS 40.0%
! GATCATTTTCGTTGGGGTTT+TGG + chr2_3:32184780-32184799 Msa0288120:CDS 40.0%
TTGTGAATCCGGTGGATATA+GGG + chr2_3:32184818-32184837 Msa0288120:CDS 40.0%
!! GAAATGAGTGTTGAAACGGA+CGG + chr2_3:32184865-32184884 Msa0288120:CDS 40.0%
!! CTATTGGATTTTTAGAGGCG+TGG + chr2_3:32184968-32184987 Msa0288120:CDS 40.0%
CCTGTGTGCCTTATGTAAAA+GGG - chr2_3:32185072-32185091 None:intergenic 40.0%
ACCTGTGTGCCTTATGTAAA+AGG - chr2_3:32185073-32185092 None:intergenic 40.0%
TTTGATATTGGAGGAGTCCT+AGG + chr2_3:32185259-32185278 Msa0288120:CDS 40.0%
CATATCAGAAATGAAACCGG+CGG - chr2_3:32185293-32185312 None:intergenic 40.0%
!! CTGCTTTTGTATCGTGCTTT+CGG + chr2_3:32185367-32185386 Msa0288120:CDS 40.0%
! TGCTTTTGTATCGTGCTTTC+GGG + chr2_3:32185368-32185387 Msa0288120:CDS 40.0%
GCAGTTGTAATTAGCGAGTA+CGG - chr2_3:32185454-32185473 None:intergenic 40.0%
! ACTGCAATCATTGATGGTAC+TGG + chr2_3:32185538-32185557 Msa0288120:CDS 40.0%
!! ATTGATGGTACTGGTTCTGT+TGG + chr2_3:32185547-32185566 Msa0288120:CDS 40.0%
GCAGGTTATGTTTCAACTAG+GGG + chr2_3:32185592-32185611 Msa0288120:CDS 40.0%
GTTATGTTTCAACTAGGGGA+TGG + chr2_3:32185596-32185615 Msa0288120:CDS 40.0%
GAGATAAGAGAGAAGCTTTC+AGG + chr2_3:32185691-32185710 Msa0288120:CDS 40.0%
AAACCGGGTTGTGTTCAGAT+CGG - chr2_3:32183912-32183931 None:intergenic 45.0%
AAACCTTTGCGTGGAAAACC+GGG - chr2_3:32183927-32183946 None:intergenic 45.0%
GAAATTGGTGAGAGCAAGAG+AGG - chr2_3:32183975-32183994 None:intergenic 45.0%
AGGCTTCCTAGATGCATGAA+AGG - chr2_3:32184269-32184288 None:intergenic 45.0%
GGTTGAATTGGTTGGAACTG+TGG - chr2_3:32184320-32184339 None:intergenic 45.0%
ACCCGAATCAAGGGTTGAAT+TGG - chr2_3:32184332-32184351 None:intergenic 45.0%
!! ATTCAACCCTTGATTCGGGT+TGG + chr2_3:32184332-32184351 Msa0288120:CDS 45.0%
CCTCGAGTTCCATTAAAAGG+CGG - chr2_3:32184358-32184377 None:intergenic 45.0%
TCCATTGGCATGTATTTGGC+TGG + chr2_3:32184424-32184443 Msa0288120:CDS 45.0%
ACCAGCCAAATACATGCCAA+TGG - chr2_3:32184428-32184447 None:intergenic 45.0%
! GTTTCTTGTGTTTGGGATGG+TGG + chr2_3:32184477-32184496 Msa0288120:CDS 45.0%
! GTCGGTGTTCAGATTGTTTG+TGG + chr2_3:32184568-32184587 Msa0288120:CDS 45.0%
GAGTGTTTCAGTCAATTGGG+TGG + chr2_3:32184590-32184609 Msa0288120:CDS 45.0%
CCAACAACTGCAACAACACA+AGG - chr2_3:32184616-32184635 None:intergenic 45.0%
! CCTTGTGTTGTTGCAGTTGT+TGG + chr2_3:32184613-32184632 Msa0288120:CDS 45.0%
! CAGTTGTTGGGAATTGGCTT+GGG + chr2_3:32184626-32184645 Msa0288120:CDS 45.0%
!! AGTTGTTGGGAATTGGCTTG+GGG + chr2_3:32184627-32184646 Msa0288120:CDS 45.0%
!! ATTGGCTTGGGGAATCAAAG+AGG + chr2_3:32184638-32184657 Msa0288120:CDS 45.0%
!! TTGGCTTGGGGAATCAAAGA+GGG + chr2_3:32184639-32184658 Msa0288120:CDS 45.0%
!! GGGGATTGATAATGGGGATA+TGG + chr2_3:32184659-32184678 Msa0288120:CDS 45.0%
ACCTCGGTTGGGAATATCAT+TGG + chr2_3:32184691-32184710 Msa0288120:CDS 45.0%
ACCAATGATATTCCCAACCG+AGG - chr2_3:32184695-32184714 None:intergenic 45.0%
! GGTTATTGCTTCGGGTGTTT+TGG + chr2_3:32184717-32184736 Msa0288120:CDS 45.0%
!!! GCTTCGGGTGTTTTGGAATT+TGG + chr2_3:32184724-32184743 Msa0288120:CDS 45.0%
!!! CGGGTGTTTTGGAATTTGGA+TGG + chr2_3:32184728-32184747 Msa0288120:CDS 45.0%
! GTTTCTTGTTGTGAATCCGG+TGG + chr2_3:32184810-32184829 Msa0288120:CDS 45.0%
GTTGTGAATCCGGTGGATAT+AGG + chr2_3:32184817-32184836 Msa0288120:CDS 45.0%
GATATAGGGTTTGCGAGTTC+TGG + chr2_3:32184832-32184851 Msa0288120:CDS 45.0%
TCTGCAGAAAGTCGAATCAG+AGG + chr2_3:32184897-32184916 Msa0288120:CDS 45.0%
! TTAGAGGCGTGGAAAATACC+TGG + chr2_3:32184979-32184998 Msa0288120:CDS 45.0%
! CCCTTTTACATAAGGCACAC+AGG + chr2_3:32185069-32185088 Msa0288120:CDS 45.0%
CTCGCTAATTACAACTGCTG+TGG + chr2_3:32185456-32185475 Msa0288120:CDS 45.0%
! GCTTTAGTGGTGGGAATTCT+CGG + chr2_3:32185500-32185519 Msa0288120:CDS 45.0%
! CTTTAGTGGTGGGAATTCTC+GGG + chr2_3:32185501-32185520 Msa0288120:CDS 45.0%
AAACCGGGTTGTGTTCAGAT+CGG - chr2_3:32183912-32183931 None:intergenic 45.0%
AAACCTTTGCGTGGAAAACC+GGG - chr2_3:32183927-32183946 None:intergenic 45.0%
GAAATTGGTGAGAGCAAGAG+AGG - chr2_3:32183975-32183994 None:intergenic 45.0%
AGGCTTCCTAGATGCATGAA+AGG - chr2_3:32184269-32184288 None:intergenic 45.0%
GGTTGAATTGGTTGGAACTG+TGG - chr2_3:32184320-32184339 None:intergenic 45.0%
ACCCGAATCAAGGGTTGAAT+TGG - chr2_3:32184332-32184351 None:intergenic 45.0%
!! ATTCAACCCTTGATTCGGGT+TGG + chr2_3:32184332-32184351 Msa0288120:CDS 45.0%
CCTCGAGTTCCATTAAAAGG+CGG - chr2_3:32184358-32184377 None:intergenic 45.0%
TCCATTGGCATGTATTTGGC+TGG + chr2_3:32184424-32184443 Msa0288120:CDS 45.0%
ACCAGCCAAATACATGCCAA+TGG - chr2_3:32184428-32184447 None:intergenic 45.0%
! GTTTCTTGTGTTTGGGATGG+TGG + chr2_3:32184477-32184496 Msa0288120:CDS 45.0%
! GTCGGTGTTCAGATTGTTTG+TGG + chr2_3:32184568-32184587 Msa0288120:CDS 45.0%
GAGTGTTTCAGTCAATTGGG+TGG + chr2_3:32184590-32184609 Msa0288120:CDS 45.0%
CCAACAACTGCAACAACACA+AGG - chr2_3:32184616-32184635 None:intergenic 45.0%
! CCTTGTGTTGTTGCAGTTGT+TGG + chr2_3:32184613-32184632 Msa0288120:CDS 45.0%
! CAGTTGTTGGGAATTGGCTT+GGG + chr2_3:32184626-32184645 Msa0288120:CDS 45.0%
!! AGTTGTTGGGAATTGGCTTG+GGG + chr2_3:32184627-32184646 Msa0288120:CDS 45.0%
!! ATTGGCTTGGGGAATCAAAG+AGG + chr2_3:32184638-32184657 Msa0288120:CDS 45.0%
!! TTGGCTTGGGGAATCAAAGA+GGG + chr2_3:32184639-32184658 Msa0288120:CDS 45.0%
!! GGGGATTGATAATGGGGATA+TGG + chr2_3:32184659-32184678 Msa0288120:CDS 45.0%
ACCTCGGTTGGGAATATCAT+TGG + chr2_3:32184691-32184710 Msa0288120:CDS 45.0%
ACCAATGATATTCCCAACCG+AGG - chr2_3:32184695-32184714 None:intergenic 45.0%
! GGTTATTGCTTCGGGTGTTT+TGG + chr2_3:32184717-32184736 Msa0288120:CDS 45.0%
!!! GCTTCGGGTGTTTTGGAATT+TGG + chr2_3:32184724-32184743 Msa0288120:CDS 45.0%
!!! CGGGTGTTTTGGAATTTGGA+TGG + chr2_3:32184728-32184747 Msa0288120:CDS 45.0%
! GTTTCTTGTTGTGAATCCGG+TGG + chr2_3:32184810-32184829 Msa0288120:CDS 45.0%
GTTGTGAATCCGGTGGATAT+AGG + chr2_3:32184817-32184836 Msa0288120:CDS 45.0%
GATATAGGGTTTGCGAGTTC+TGG + chr2_3:32184832-32184851 Msa0288120:CDS 45.0%
TCTGCAGAAAGTCGAATCAG+AGG + chr2_3:32184897-32184916 Msa0288120:CDS 45.0%
! TTAGAGGCGTGGAAAATACC+TGG + chr2_3:32184979-32184998 Msa0288120:CDS 45.0%
! CCCTTTTACATAAGGCACAC+AGG + chr2_3:32185069-32185088 Msa0288120:CDS 45.0%
CTCGCTAATTACAACTGCTG+TGG + chr2_3:32185456-32185475 Msa0288120:CDS 45.0%
! GCTTTAGTGGTGGGAATTCT+CGG + chr2_3:32185500-32185519 Msa0288120:CDS 45.0%
! CTTTAGTGGTGGGAATTCTC+GGG + chr2_3:32185501-32185520 Msa0288120:CDS 45.0%
AACCGGGTTGTGTTCAGATC+GGG - chr2_3:32183911-32183930 None:intergenic 50.0%
TGGAGCTAGGCTCAAACTCT+TGG - chr2_3:32184152-32184171 None:intergenic 50.0%
AGAGATTCAGAGCTGGAGCT+AGG - chr2_3:32184165-32184184 None:intergenic 50.0%
!! TTGTGAGGGGGTTTCAGGTT+TGG - chr2_3:32184190-32184209 None:intergenic 50.0%
! CCGCCTTTTAATGGAACTCG+AGG + chr2_3:32184355-32184374 Msa0288120:CDS 50.0%
!! TGGCTGGTCATGTTGGTGAT+AGG + chr2_3:32184440-32184459 Msa0288120:CDS 50.0%
GCAGTTGTTGGGAATTGGCT+TGG + chr2_3:32184625-32184644 Msa0288120:CDS 50.0%
! TGGCTTGGGGAATCAAAGAG+GGG + chr2_3:32184640-32184659 Msa0288120:CDS 50.0%
TGGAATTCGCATACCTCGGT+TGG + chr2_3:32184679-32184698 Msa0288120:CDS 50.0%
GGAATTCGCATACCTCGGTT+GGG + chr2_3:32184680-32184699 Msa0288120:CDS 50.0%
!! TGGATGGGGTTGGTCATTTG+TGG + chr2_3:32184744-32184763 Msa0288120:CDS 50.0%
CTCGCAAACCCTATATCCAC+CGG - chr2_3:32184829-32184848 None:intergenic 50.0%
!! AGGGTTTGCGAGTTCTGGAA+TGG + chr2_3:32184837-32184856 Msa0288120:CDS 50.0%
TTCTTTGTTGCAGCGGTTGC+TGG + chr2_3:32185193-32185212 Msa0288120:intron 50.0%
GATATTGGAGGAGTCCTAGG+CGG + chr2_3:32185262-32185281 Msa0288120:CDS 50.0%
GCACGATACAAAAGCAGAGC+TGG - chr2_3:32185364-32185383 None:intergenic 50.0%
!! GCTCTTGGACCACTTTTAGC+AGG + chr2_3:32185574-32185593 Msa0288120:CDS 50.0%
AACCGGGTTGTGTTCAGATC+GGG - chr2_3:32183911-32183930 None:intergenic 50.0%
TGGAGCTAGGCTCAAACTCT+TGG - chr2_3:32184152-32184171 None:intergenic 50.0%
AGAGATTCAGAGCTGGAGCT+AGG - chr2_3:32184165-32184184 None:intergenic 50.0%
!! TTGTGAGGGGGTTTCAGGTT+TGG - chr2_3:32184190-32184209 None:intergenic 50.0%
! CCGCCTTTTAATGGAACTCG+AGG + chr2_3:32184355-32184374 Msa0288120:CDS 50.0%
!! TGGCTGGTCATGTTGGTGAT+AGG + chr2_3:32184440-32184459 Msa0288120:CDS 50.0%
GCAGTTGTTGGGAATTGGCT+TGG + chr2_3:32184625-32184644 Msa0288120:CDS 50.0%
! TGGCTTGGGGAATCAAAGAG+GGG + chr2_3:32184640-32184659 Msa0288120:CDS 50.0%
TGGAATTCGCATACCTCGGT+TGG + chr2_3:32184679-32184698 Msa0288120:CDS 50.0%
GGAATTCGCATACCTCGGTT+GGG + chr2_3:32184680-32184699 Msa0288120:CDS 50.0%
!! TGGATGGGGTTGGTCATTTG+TGG + chr2_3:32184744-32184763 Msa0288120:CDS 50.0%
CTCGCAAACCCTATATCCAC+CGG - chr2_3:32184829-32184848 None:intergenic 50.0%
!! AGGGTTTGCGAGTTCTGGAA+TGG + chr2_3:32184837-32184856 Msa0288120:CDS 50.0%
TTCTTTGTTGCAGCGGTTGC+TGG + chr2_3:32185193-32185212 Msa0288120:intron 50.0%
GATATTGGAGGAGTCCTAGG+CGG + chr2_3:32185262-32185281 Msa0288120:CDS 50.0%
GCACGATACAAAAGCAGAGC+TGG - chr2_3:32185364-32185383 None:intergenic 50.0%
!! GCTCTTGGACCACTTTTAGC+AGG + chr2_3:32185574-32185593 Msa0288120:CDS 50.0%
AGCCCGATCTGAACACAACC+CGG + chr2_3:32183906-32183925 Msa0288120:five_prime_UTR 55.0%
! CAACCCGGTTTTCCACGCAA+AGG + chr2_3:32183921-32183940 Msa0288120:five_prime_UTR 55.0%
!! GGGTTTTGTGAGGGGGTTTC+AGG - chr2_3:32184195-32184214 None:intergenic 55.0%
!!! TCGGGTTGGCCGCCTTTTAA+TGG + chr2_3:32184346-32184365 Msa0288120:CDS 55.0%
ATGGAACTCGAGGAACTCGC+CGG + chr2_3:32184365-32184384 Msa0288120:CDS 55.0%
! GGTTGGTCATTTGTGGTGCC+TGG + chr2_3:32184751-32184770 Msa0288120:CDS 55.0%
TGTTGAAACGGACGGTGCAG+AGG + chr2_3:32184873-32184892 Msa0288120:CDS 55.0%
AAAGCAAACGGAGCGACTCC+AGG - chr2_3:32185000-32185019 None:intergenic 55.0%
AAAGCCCTGCGTACCGAGAT+CGG - chr2_3:32185485-32185504 None:intergenic 55.0%
! GTACGCAGGGCTTTAGTGGT+GGG + chr2_3:32185491-32185510 Msa0288120:CDS 55.0%
GGTTCTGTTGGAGCTGCTCT+TGG + chr2_3:32185559-32185578 Msa0288120:CDS 55.0%
AGCCCGATCTGAACACAACC+CGG + chr2_3:32183906-32183925 Msa0288120:five_prime_UTR 55.0%
! CAACCCGGTTTTCCACGCAA+AGG + chr2_3:32183921-32183940 Msa0288120:five_prime_UTR 55.0%
!! GGGTTTTGTGAGGGGGTTTC+AGG - chr2_3:32184195-32184214 None:intergenic 55.0%
!!! TCGGGTTGGCCGCCTTTTAA+TGG + chr2_3:32184346-32184365 Msa0288120:CDS 55.0%
ATGGAACTCGAGGAACTCGC+CGG + chr2_3:32184365-32184384 Msa0288120:CDS 55.0%
! GGTTGGTCATTTGTGGTGCC+TGG + chr2_3:32184751-32184770 Msa0288120:CDS 55.0%
TGTTGAAACGGACGGTGCAG+AGG + chr2_3:32184873-32184892 Msa0288120:CDS 55.0%
AAAGCAAACGGAGCGACTCC+AGG - chr2_3:32185000-32185019 None:intergenic 55.0%
AAAGCCCTGCGTACCGAGAT+CGG - chr2_3:32185485-32185504 None:intergenic 55.0%
! GTACGCAGGGCTTTAGTGGT+GGG + chr2_3:32185491-32185510 Msa0288120:CDS 55.0%
GGTTCTGTTGGAGCTGCTCT+TGG + chr2_3:32185559-32185578 Msa0288120:CDS 55.0%
AGGCGGCCAACCCGAATCAA+GGG - chr2_3:32184341-32184360 None:intergenic 60.0%
AAGGCGGCCAACCCGAATCA+AGG - chr2_3:32184342-32184361 None:intergenic 60.0%
CGAGATCAACCTCGCCAAGC+CGG - chr2_3:32184387-32184406 None:intergenic 60.0%
!! GTGTTTGGGATGGTGGGCAG+CGG + chr2_3:32184484-32184503 Msa0288120:CDS 60.0%
ACTGCTGTGGCTGCCGATCT+CGG + chr2_3:32185469-32185488 Msa0288120:CDS 60.0%
! CTCGGTACGCAGGGCTTTAG+TGG + chr2_3:32185487-32185506 Msa0288120:CDS 60.0%
! GGTACGCAGGGCTTTAGTGG+TGG + chr2_3:32185490-32185509 Msa0288120:CDS 60.0%
TGGTGGGAATTCTCGGGCAC+TGG + chr2_3:32185507-32185526 Msa0288120:CDS 60.0%
AGGCGGCCAACCCGAATCAA+GGG - chr2_3:32184341-32184360 None:intergenic 60.0%
AAGGCGGCCAACCCGAATCA+AGG - chr2_3:32184342-32184361 None:intergenic 60.0%
CGAGATCAACCTCGCCAAGC+CGG - chr2_3:32184387-32184406 None:intergenic 60.0%
!! GTGTTTGGGATGGTGGGCAG+CGG + chr2_3:32184484-32184503 Msa0288120:CDS 60.0%
ACTGCTGTGGCTGCCGATCT+CGG + chr2_3:32185469-32185488 Msa0288120:CDS 60.0%
! CTCGGTACGCAGGGCTTTAG+TGG + chr2_3:32185487-32185506 Msa0288120:CDS 60.0%
! GGTACGCAGGGCTTTAGTGG+TGG + chr2_3:32185490-32185509 Msa0288120:CDS 60.0%
TGGTGGGAATTCTCGGGCAC+TGG + chr2_3:32185507-32185526 Msa0288120:CDS 60.0%
! ACTCGAGGAACTCGCCGGCT+TGG + chr2_3:32184370-32184389 Msa0288120:CDS 65.0%
GTCCTAGGCGGAATCACCGC+CGG + chr2_3:32185274-32185293 Msa0288120:CDS 65.0%
AACCGGCGGTGATTCCGCCT+AGG - chr2_3:32185279-32185298 None:intergenic 65.0%
GCTGCCGATCTCGGTACGCA+GGG + chr2_3:32185478-32185497 Msa0288120:CDS 65.0%
! ACTCGAGGAACTCGCCGGCT+TGG + chr2_3:32184370-32184389 Msa0288120:CDS 65.0%
GTCCTAGGCGGAATCACCGC+CGG + chr2_3:32185274-32185293 Msa0288120:CDS 65.0%
AACCGGCGGTGATTCCGCCT+AGG - chr2_3:32185279-32185298 None:intergenic 65.0%
GCTGCCGATCTCGGTACGCA+GGG + chr2_3:32185478-32185497 Msa0288120:CDS 65.0%
!! AGGAACTCGCCGGCTTGGCG+AGG + chr2_3:32184375-32184394 Msa0288120:CDS 70.0%
GGCTGCCGATCTCGGTACGC+AGG + chr2_3:32185477-32185496 Msa0288120:CDS 70.0%
!! AGGAACTCGCCGGCTTGGCG+AGG + chr2_3:32184375-32184394 Msa0288120:CDS 70.0%
GGCTGCCGATCTCGGTACGC+AGG + chr2_3:32185477-32185496 Msa0288120:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 32183877 32185965 32183877 ID=Msa0288120;Name=Msa0288120
chr2_3 mRNA 32183877 32185965 32183877 ID=Msa0288120-mRNA-1;Parent=Msa0288120;Name=Msa0288120-mRNA-1;_AED=0.00;_eAED=0.00;_QI=259|1|1|1|1|1|2|245|489
chr2_3 exon 32183877 32185090 32183877 ID=Msa0288120-mRNA-1:exon:10799;Parent=Msa0288120-mRNA-1
chr2_3 exon 32185206 32185965 32185206 ID=Msa0288120-mRNA-1:exon:10800;Parent=Msa0288120-mRNA-1
chr2_3 five_prime_UTR 32183877 32184135 32183877 ID=Msa0288120-mRNA-1:five_prime_utr;Parent=Msa0288120-mRNA-1
chr2_3 CDS 32184136 32185090 32184136 ID=Msa0288120-mRNA-1:cds;Parent=Msa0288120-mRNA-1
chr2_3 CDS 32185206 32185720 32185206 ID=Msa0288120-mRNA-1:cds;Parent=Msa0288120-mRNA-1
chr2_3 three_prime_UTR 32185721 32185965 32185721 ID=Msa0288120-mRNA-1:three_prime_utr;Parent=Msa0288120-mRNA-1
Gene Sequence

>Msa0288120

ATGGAATCAAATTCCAAGAGTTTGAGCCTAGCTCCAGCTCTGAATCTCTTTCCAAACCTGAAACCCCCTCACAAAACCCTACTATTCCACCAAATATGTGTTCTTATTATCACATTTCTTGCATATGCTTCCTTTCATGCATCTAGGAAGCCTCCTAGTATTGTTAAAAGTGTTCTGGGACCCACAGTTCCAACCAATTCAACCCTTGATTCGGGTTGGCCGCCTTTTAATGGAACTCGAGGAACTCGCCGGCTTGGCGAGGTTGATCTCGCATTTCTTACTTCTTACTCCATTGGCATGTATTTGGCTGGTCATGTTGGTGATAGGATTGATTTGAGGTTGTTTCTTGTGTTTGGGATGGTGGGCAGCGGTTTTTTTACGATACTTTTTGGGTTAGGATACTGGTTTGATGTTCATGTGTTGGGGTTTTTTGTCGGTGTTCAGATTGTTTGTGGAGTGTTTCAGTCAATTGGGTGGCCTTGTGTTGTTGCAGTTGTTGGGAATTGGCTTGGGGAATCAAAGAGGGGATTGATAATGGGGATATGGAATTCGCATACCTCGGTTGGGAATATCATTGGTTCGGTTATTGCTTCGGGTGTTTTGGAATTTGGATGGGGTTGGTCATTTGTGGTGCCTGGAGTTTTGATCATTTTCGTTGGGGTTTTGGTGTTTCTGTTTCTTGTTGTGAATCCGGTGGATATAGGGTTTGCGAGTTCTGGAATGGAAATTGAAATGAGTGTTGAAACGGACGGTGCAGAGGATCTGCAGAAAGTCGAATCAGAGGAAGCAAAGCTAATTGATCCTGATAGTTCGATTTCAAATTCTTCGTCTGCTATTGGATTTTTAGAGGCGTGGAAAATACCTGGAGTCGCTCCGTTTGCTTTTTGTCTCTTTTTCTCAAAATTTGTTGCTTACACTTTCTTGTATTGGTTACCCTTTTACATAAGGCACACAGCGGTTGCTGGTGTGAATCTATCTCACAAAACTGCTGGGTTACTTTCAACAATATTTGATATTGGAGGAGTCCTAGGCGGAATCACCGCCGGTTTCATTTCTGATATGATTGAAGCTCGTGCTGTGACTTCAATCCTGTTCTTGTTTCTATCGATTCCAGCTCTGCTTTTGTATCGTGCTTTCGGGAGCATCTCTATGTTTACTAACATCACCTTGATGTTTCTTTCTGGATTTTTGGTGAATGGTCCGTACTCGCTAATTACAACTGCTGTGGCTGCCGATCTCGGTACGCAGGGCTTTAGTGGTGGGAATTCTCGGGCACTGGCTACTGTTACTGCAATCATTGATGGTACTGGTTCTGTTGGAGCTGCTCTTGGACCACTTTTAGCAGGTTATGTTTCAACTAGGGGATGGAACAGTGTATTTTTTATGCTCGTTTCTTCTATTTTCTTTGCTGGTTTATTCTTGATTCAAGTTGCAAGGACTGAGATAAGAGAGAAGCTTTCAGGAAAGTGA

Protein sequence

>Msa0288120

MESNSKSLSLAPALNLFPNLKPPHKTLLFHQICVLIITFLAYASFHASRKPPSIVKSVLGPTVPTNSTLDSGWPPFNGTRGTRRLGEVDLAFLTSYSIGMYLAGHVGDRIDLRLFLVFGMVGSGFFTILFGLGYWFDVHVLGFFVGVQIVCGVFQSIGWPCVVAVVGNWLGESKRGLIMGIWNSHTSVGNIIGSVIASGVLEFGWGWSFVVPGVLIIFVGVLVFLFLVVNPVDIGFASSGMEIEMSVETDGAEDLQKVESEEAKLIDPDSSISNSSSAIGFLEAWKIPGVAPFAFCLFFSKFVAYTFLYWLPFYIRHTAVAGVNLSHKTAGLLSTIFDIGGVLGGITAGFISDMIEARAVTSILFLFLSIPALLLYRAFGSISMFTNITLMFLSGFLVNGPYSLITTAVAADLGTQGFSGGNSRALATVTAIIDGTGSVGAALGPLLAGYVSTRGWNSVFFMLVSSIFFAGLFLIQVARTEIREKLSGK*