Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209760 | XP_013442522.1 | 97.721 | 351 | 7 | 1 | 1 | 351 | 1 | 350 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209760 | sp|Q94F00|IMPL1_ARATH | 81.699 | 306 | 56 | 0 | 46 | 351 | 66 | 371 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209760 | A0A072TGR0 | 97.721 | 351 | 7 | 1 | 1 | 351 | 1 | 350 | 0.0 | 707 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030000 | Msa0209760 | 0.818185 | 2.236115e-52 | -8.615850e-47 |
| Msa0073350 | Msa0209760 | 0.806660 | 7.385611e-50 | -8.615850e-47 |
| Msa0125230 | Msa0209760 | 0.819418 | 1.173412e-52 | -8.615850e-47 |
| Msa0185550 | Msa0209760 | 0.833380 | 5.513130e-56 | -8.615850e-47 |
| Msa0190000 | Msa0209760 | 0.805653 | 1.203088e-49 | -8.615850e-47 |
| Msa0206970 | Msa0209760 | 0.801309 | 9.567485e-49 | -8.615850e-47 |
| Msa0209760 | Msa0209780 | 0.972061 | 3.719854e-134 | -8.615850e-47 |
| Msa0209760 | Msa0215980 | 0.807653 | 4.550506e-50 | -8.615850e-47 |
| Msa0209760 | Msa0227960 | 0.833197 | 6.125509e-56 | -8.615850e-47 |
| Msa0209760 | Msa0236350 | 0.809671 | 1.686340e-50 | -8.615850e-47 |
| Msa0209760 | Msa0274870 | 0.809791 | 1.588858e-50 | -8.615850e-47 |
| Msa0209760 | Msa0280140 | 0.800172 | 1.632541e-48 | -8.615850e-47 |
| Msa0209760 | Msa0282860 | 0.803499 | 3.385383e-49 | -8.615850e-47 |
| Msa0209760 | Msa0285740 | 0.838043 | 3.635434e-57 | -8.615850e-47 |
| Msa0209760 | Msa0295240 | 0.809547 | 1.792729e-50 | -8.615850e-47 |
| Msa0209760 | Msa0376900 | 0.806205 | 9.211152e-50 | -8.615850e-47 |
| Msa0209760 | Msa0380420 | 0.835146 | 1.988627e-56 | -8.615850e-47 |
| Msa0209760 | Msa0434630 | 0.807290 | 5.432023e-50 | -8.615850e-47 |
| Msa0209760 | Msa0471890 | 0.811862 | 5.660832e-51 | -8.615850e-47 |
| Msa0209760 | Msa0476150 | 0.830041 | 3.670614e-55 | -8.615850e-47 |
| Msa0209760 | Msa0528870 | 0.820470 | 6.743849e-53 | -8.615850e-47 |
| Msa0209760 | Msa0606140 | 0.804042 | 2.611376e-49 | -8.615850e-47 |
| Msa0209760 | Msa0619170 | 0.802840 | 4.635371e-49 | -8.615850e-47 |
| Msa0209760 | Msa0657820 | 0.805781 | 1.131099e-49 | -8.615850e-47 |
| Msa0209760 | Msa0695930 | 0.800381 | 1.480175e-48 | -8.615850e-47 |
| Msa0209760 | Msa0749900 | 0.815658 | 8.257230e-52 | -8.615850e-47 |
| Msa0209760 | Msa0814760 | 0.823328 | 1.469231e-53 | -8.615850e-47 |
| Msa0209760 | Msa0830120 | 0.823340 | 1.460300e-53 | -8.615850e-47 |
| Msa0209760 | Msa0830450 | 0.821602 | 3.700880e-53 | -8.615850e-47 |
| Msa0209760 | Msa0869090 | 0.807045 | 6.123119e-50 | -8.615850e-47 |
| Msa0209760 | Msa0870010 | 0.816343 | 5.808166e-52 | -8.615850e-47 |
| Msa0209760 | Msa0884730 | 0.801155 | 1.028743e-48 | -8.615850e-47 |
| Msa0209760 | Msa0946650 | 0.807358 | 5.255632e-50 | -8.615850e-47 |
| Msa0209760 | Msa0975180 | 0.858851 | 6.199933e-63 | -8.615850e-47 |
| Msa0209760 | Msa1028460 | 0.838140 | 3.432664e-57 | -8.615850e-47 |
| Msa0209760 | Msa1029320 | 0.812469 | 4.174757e-51 | -8.615850e-47 |
| Msa0209760 | Msa1058980 | 0.823663 | 1.226765e-53 | -8.615850e-47 |
| Msa0209760 | Msa1070900 | 0.808610 | 2.846354e-50 | -8.615850e-47 |
| Msa0209760 | Msa1121630 | 0.819555 | 1.092261e-52 | -8.615850e-47 |
| Msa0209760 | Msa1137800 | 0.812201 | 4.775961e-51 | -8.615850e-47 |
| Msa0209760 | Msa1151120 | 0.840588 | 7.944872e-58 | -8.615850e-47 |
| Msa0209760 | Msa1178970 | 0.814555 | 1.451714e-51 | -8.615850e-47 |
| Msa0209760 | Msa1183730 | 0.813233 | 2.839786e-51 | -8.615850e-47 |
| Msa0209760 | Msa1243860 | 0.818546 | 1.852251e-52 | -8.615850e-47 |
| Msa0209760 | Msa1263970 | 0.813063 | 3.093879e-51 | -8.615850e-47 |
| Msa0209760 | Msa1264110 | 0.843626 | 1.248154e-58 | -8.615850e-47 |
| Msa0209760 | Msa1356200 | 0.829103 | 6.207186e-55 | -8.615850e-47 |
| Msa0209760 | Msa1375630 | 0.830898 | 2.266032e-55 | -8.615850e-47 |
| Msa0209760 | Msa1376530 | 0.844923 | 5.595682e-59 | -8.615850e-47 |
| Msa0209760 | Msa1376590 | 0.814778 | 1.295504e-51 | -8.615850e-47 |
| Msa0209760 | Msa1393010 | 0.825647 | 4.182690e-54 | -8.615850e-47 |
| Msa0209760 | Msa1397110 | 0.816394 | 5.657259e-52 | -8.615850e-47 |
| Msa0209760 | Msa1403900 | 0.805479 | 1.308467e-49 | -8.615850e-47 |
| Msa0209760 | Msa1437650 | 0.815428 | 9.291548e-52 | -8.615850e-47 |
| Msa0209760 | Msa1442030 | 0.813685 | 2.258854e-51 | -8.615850e-47 |
| Msa0209760 | Msa1462090 | 0.801810 | 7.551925e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209760 | MtrunA17_Chr2g0306101 | 97.721 | 351 | 7 | 1 | 1 | 351 | 1 | 350 | 0.0 | 707 |
| Msa0209760 | MtrunA17_Chr2g0290121 | 33.962 | 265 | 161 | 7 | 67 | 324 | 11 | 268 | 5.36e-38 | 137 |
| Msa0209760 | MtrunA17_Chr3g0145001 | 25.969 | 258 | 165 | 7 | 54 | 302 | 53 | 293 | 7.88e-16 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209760 | AT1G31190.1 | 81.699 | 306 | 56 | 0 | 46 | 351 | 66 | 371 | 0.0 | 541 |
| Msa0209760 | AT3G02870.1 | 35.685 | 241 | 142 | 6 | 79 | 313 | 22 | 255 | 1.73e-38 | 138 |
| Msa0209760 | AT3G02870.3 | 35.685 | 241 | 142 | 6 | 79 | 313 | 19 | 252 | 1.86e-38 | 138 |
| Msa0209760 | AT3G02870.2 | 34.855 | 241 | 142 | 7 | 79 | 313 | 22 | 253 | 2.39e-35 | 130 |
| Msa0209760 | AT4G39120.1 | 28.390 | 236 | 154 | 5 | 70 | 302 | 89 | 312 | 4.60e-20 | 90.1 |
| Msa0209760 | AT4G39120.2 | 28.390 | 236 | 154 | 5 | 70 | 302 | 118 | 341 | 5.49e-20 | 90.5 |
Find 97 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAATTGTAGAAGCTTAT+TGG | 0.200657 | 2_1:-49152694 | Msa0209760:CDS |
| TCTCTTCTAGTGACAGGTTT+TGG | 0.218112 | 2_1:-49152911 | Msa0209760:CDS |
| AGAATTATTCAAAGAATTTA+CGG | 0.259184 | 2_1:-49152855 | Msa0209760:CDS |
| TTTGAAGATCATCTTATTCT+TGG | 0.263391 | 2_1:-49155433 | Msa0209760:CDS |
| AACACAATCTCTATTCCTTT+TGG | 0.288544 | 2_1:-49156756 | Msa0209760:five_prime_UTR |
| GGGGAAGAAGGAGGCATTAT+AGG | 0.301861 | 2_1:-49155412 | Msa0209760:CDS |
| CCAAGGGATATTACGTATAA+AGG | 0.307417 | 2_1:-49155645 | Msa0209760:CDS |
| GGGAATTGTAGAAGCTTATT+GGG | 0.311951 | 2_1:-49152693 | Msa0209760:CDS |
| GGATATGGCTGCTGGTGTTT+TGG | 0.334606 | 2_1:-49152651 | Msa0209760:intron |
| TTGAAGATCATCTTATTCTT+GGG | 0.339310 | 2_1:-49155432 | Msa0209760:CDS |
| ACTATGTCTCTAACAGCAAT+AGG | 0.344462 | 2_1:-49150761 | Msa0209760:three_prime_UTR |
| GGACATGTGTCATGTGGCTT+TGG | 0.346148 | 2_1:-49152714 | Msa0209760:CDS |
| CCCAGCTTTGCTGTTTCTGT+TGG | 0.353190 | 2_1:-49154789 | Msa0209760:CDS |
| TCACAGCTTCTGGAGAGAAT+TGG | 0.358423 | 2_1:-49150914 | Msa0209760:intron |
| TAATTGTTATAAACTGCATT+TGG | 0.362282 | 2_1:-49150684 | Msa0209760:three_prime_UTR |
| TTGCACTCACTTCGATCCTT+TGG | 0.364627 | 2_1:+49153072 | None:intergenic |
| TCGTCTAAAGCCATGGGATA+TGG | 0.366268 | 2_1:-49152666 | Msa0209760:CDS |
| TAATTTCAGGTTGAGTTTGT+TGG | 0.386912 | 2_1:-49153303 | Msa0209760:intron |
| GACATGTGTCATGTGGCTTT+GGG | 0.387052 | 2_1:-49152713 | Msa0209760:CDS |
| CGAAGTGAGTGCAACTAATC+AGG | 0.390231 | 2_1:-49153063 | Msa0209760:intron |
| CTCTGGTGCATTGATCCCTT+AGG | 0.393019 | 2_1:-49155370 | Msa0209760:intron |
| TCCAACAGAAACAGCAAAGC+TGG | 0.410104 | 2_1:+49154788 | None:intergenic |
| TTCGAGAGGTTTGACTTTGA+AGG | 0.411142 | 2_1:+49156628 | None:intergenic |
| CATCTTATTCTTGGGGAAGA+AGG | 0.419054 | 2_1:-49155424 | Msa0209760:CDS |
| GGTATGAACACGATGAAGCC+TGG | 0.422749 | 2_1:-49152889 | Msa0209760:CDS |
| CTGAAGAACAACTCTATTCA+AGG | 0.428697 | 2_1:-49156557 | Msa0209760:CDS |
| AGGGTTGGTGCACGCTCCAC+TGG | 0.434921 | 2_1:-49156537 | Msa0209760:CDS |
| AAGAATTTACGGATGTCAGC+AGG | 0.448133 | 2_1:-49152844 | Msa0209760:CDS |
| CCTTTATACGTAATATCCCT+TGG | 0.454380 | 2_1:+49155645 | None:intergenic |
| AAAGTCAAACCTCTCGAAGT+TGG | 0.465088 | 2_1:-49156623 | Msa0209760:CDS |
| GAGAATTGGACCTGCAACAG+AGG | 0.468618 | 2_1:-49150900 | Msa0209760:CDS |
| AGGAGGATCGCAGGTTGAAC+GGG | 0.469988 | 2_1:+49156513 | None:intergenic |
| TAATTCTATGTTAGTAGCCC+AGG | 0.475569 | 2_1:+49152871 | None:intergenic |
| ATCAATGCACCAGAGATAAT+CGG | 0.477276 | 2_1:+49155378 | None:intergenic |
| TTTCAGGTTGAGTTTGTTGG+TGG | 0.480206 | 2_1:-49153300 | Msa0209760:intron |
| CAGCAGTTGTGGCAACTTGA+AGG | 0.490897 | 2_1:+49156493 | None:intergenic |
| ATGTAGCTTCCGATTATCTC+TGG | 0.495237 | 2_1:-49155387 | Msa0209760:CDS |
| CTATGTCTCTAACAGCAATA+GGG | 0.496446 | 2_1:-49150760 | Msa0209760:three_prime_UTR |
| ACGTCAGCTCTGTAGTCCTC+AGG | 0.500123 | 2_1:+49150836 | None:intergenic |
| GGCACAGTCTCTCGGATGGA+TGG | 0.502346 | 2_1:-49152066 | Msa0209760:CDS |
| GGGAATATCGTCTAAAGCCA+TGG | 0.516658 | 2_1:-49152673 | Msa0209760:CDS |
| GCCACAACTGCTGCTCAGAC+TGG | 0.519271 | 2_1:-49156483 | Msa0209760:CDS |
| AAGCTGGTGGCACAGTCTCT+CGG | 0.522324 | 2_1:-49152074 | Msa0209760:CDS |
| TTGTTGGTGGTCCTATGTGT+TGG | 0.522702 | 2_1:-49153287 | Msa0209760:CDS |
| ACCAGTCTGAGCAGCAGTTG+TGG | 0.522983 | 2_1:+49156482 | None:intergenic |
| GAGCATTCTGCAACGGCCAA+AGG | 0.523515 | 2_1:-49153088 | Msa0209760:CDS |
| CGCAGGTTGAACGGGTCCAG+TGG | 0.525286 | 2_1:+49156521 | None:intergenic |
| TTATAGATGGTAGAGGAAGC+TGG | 0.525422 | 2_1:-49152090 | Msa0209760:intron |
| TGCTGCTCAGACTGGTGCCA+AGG | 0.529716 | 2_1:-49156475 | Msa0209760:intron |
| GTCAAACCTCTCGAAGTTGG+AGG | 0.534251 | 2_1:-49156620 | Msa0209760:CDS |
| CATTAATTTATAGATGGTAG+AGG | 0.538600 | 2_1:-49152097 | Msa0209760:intron |
| AAGGAGGATCGCAGGTTGAA+CGG | 0.541106 | 2_1:+49156512 | None:intergenic |
| AAATCCTACTGCTGCTACAG+TGG | 0.541368 | 2_1:-49154751 | Msa0209760:intron |
| GAACGATCTCTTCTAGTGAC+AGG | 0.541726 | 2_1:-49152917 | Msa0209760:CDS |
| AAGCCATGGGATATGGCTGC+TGG | 0.542409 | 2_1:-49152659 | Msa0209760:CDS |
| CTTTGAAGGCGGTAAGTGGT+AGG | 0.550640 | 2_1:+49156642 | None:intergenic |
| ACGGCTTGGTGCAGCTGCTG+TGG | 0.552919 | 2_1:-49152735 | Msa0209760:CDS |
| TTGACTTTGAAGGCGGTAAG+TGG | 0.564287 | 2_1:+49156638 | None:intergenic |
| GAACAACTCTATTCAAGGGT+TGG | 0.568420 | 2_1:-49156552 | Msa0209760:CDS |
| TGAAGATCATCTTATTCTTG+GGG | 0.571098 | 2_1:-49155431 | Msa0209760:CDS |
| ATCAGAGACTAACCTTAGCA+TGG | 0.571478 | 2_1:+49151992 | None:intergenic |
| GATCAAAATGAGCTATGAGA+TGG | 0.572118 | 2_1:+49156723 | None:intergenic |
| CGAAGCTGCAATATTAGAAG+TGG | 0.573792 | 2_1:-49155467 | Msa0209760:CDS |
| TGGTTATATACAGGTTGTGA+TGG | 0.576021 | 2_1:-49155682 | Msa0209760:intron |
| GCTTAGGGTGTAAGACGGCT+TGG | 0.577813 | 2_1:-49152749 | Msa0209760:intron |
| TGCTGTGGACATGTGTCATG+TGG | 0.577937 | 2_1:-49152720 | Msa0209760:CDS |
| CTTATTCTTGGGGAAGAAGG+AGG | 0.578094 | 2_1:-49155421 | Msa0209760:CDS |
| TTGATGCTTAGGGTGTAAGA+CGG | 0.578406 | 2_1:-49152754 | Msa0209760:intron |
| GATGGATGGGTGGAACCAAA+AGG | 0.583636 | 2_1:+49156741 | None:intergenic |
| GCAACTTGAAGGAGGATCGC+AGG | 0.586001 | 2_1:+49156504 | None:intergenic |
| GTATAAAGGATTAACTGACT+TGG | 0.588684 | 2_1:-49155631 | Msa0209760:CDS |
| AAACGGCGTGATCCATGCTA+AGG | 0.590514 | 2_1:-49152004 | Msa0209760:intron |
| GTATGAACACGATGAAGCCT+GGG | 0.594244 | 2_1:-49152888 | Msa0209760:CDS |
| AGAATTGGACCTGCAACAGA+GGG | 0.598356 | 2_1:-49150899 | Msa0209760:CDS |
| GGAATATCGTCTAAAGCCAT+GGG | 0.599869 | 2_1:-49152672 | Msa0209760:CDS |
| TTCATTATGGTACAAACCTG+AGG | 0.600198 | 2_1:-49150852 | Msa0209760:CDS |
| CCAACAGAAACAGCAAAGCT+GGG | 0.601113 | 2_1:+49154789 | None:intergenic |
| TGAAGAACAACTCTATTCAA+GGG | 0.603323 | 2_1:-49156556 | Msa0209760:CDS |
| TGGATGCTGTTAATAAGCCA+AGG | 0.604018 | 2_1:-49155662 | Msa0209760:CDS |
| GGTGGTGGAGCATTCTGCAA+CGG | 0.608637 | 2_1:-49153095 | Msa0209760:CDS |
| TCTGTTGGAGTTCTATATCG+AGG | 0.608905 | 2_1:-49154774 | Msa0209760:CDS |
| AAATGAGCTATGAGATGGAT+GGG | 0.619523 | 2_1:+49156728 | None:intergenic |
| AGAATTTACGGATGTCAGCA+GGG | 0.621463 | 2_1:-49152843 | Msa0209760:intron |
| TGGTGGCACAGTCTCTCGGA+TGG | 0.621555 | 2_1:-49152070 | Msa0209760:CDS |
| TGAAGGCGGTAAGTGGTAGG+AGG | 0.632544 | 2_1:+49156645 | None:intergenic |
| TTTCAGCCTCCAACTTCGAG+AGG | 0.634852 | 2_1:+49156614 | None:intergenic |
| AAAATGAGCTATGAGATGGA+TGG | 0.635454 | 2_1:+49156727 | None:intergenic |
| GAGAGGTTTGACTTTGAAGG+CGG | 0.636640 | 2_1:+49156631 | None:intergenic |
| ATCACCACTGTAGCAGCAGT+AGG | 0.645561 | 2_1:+49154747 | None:intergenic |
| ACACCAGCAGCCATATCCCA+TGG | 0.649403 | 2_1:+49152656 | None:intergenic |
| GGATGCTGTTAATAAGCCAA+GGG | 0.650904 | 2_1:-49155661 | Msa0209760:CDS |
| ACAGTCTCTCGGATGGATGG+CGG | 0.651173 | 2_1:-49152063 | Msa0209760:CDS |
| CAGTTGTGGCAACTTGAAGG+AGG | 0.652821 | 2_1:+49156496 | None:intergenic |
| GGGACAACAAACTTTGCACA+TGG | 0.671367 | 2_1:-49154816 | Msa0209760:CDS |
| ATGCGAGTATTCCAACACAT+AGG | 0.693784 | 2_1:+49153276 | None:intergenic |
| TGAGCTATGAGATGGATGGG+TGG | 0.716296 | 2_1:+49156731 | None:intergenic |
| TAGATGGTAGAGGAAGCTGG+TGG | 0.772384 | 2_1:-49152087 | Msa0209760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTTTTTTTTAA+AGG | - | chr2_1:49155828-49155847 | Msa0209760:intron | 0.0% |
| !! | AAAAATTAACATATATGTAA+CGG | - | chr2_1:49151442-49151461 | Msa0209760:intron | 10.0% |
| !!! | AATTTTTTTTTTTCAAATAG+TGG | + | chr2_1:49153265-49153284 | None:intergenic | 10.0% |
| !!! | ATATTCATTTTAGTATAAAT+AGG | + | chr2_1:49153773-49153792 | None:intergenic | 10.0% |
| !! | AAAGCAAAAAACAATTATTT+AGG | + | chr2_1:49151091-49151110 | None:intergenic | 15.0% |
| !!! | AATTATTTCTTAAAATGTTG+GGG | + | chr2_1:49152066-49152085 | None:intergenic | 15.0% |
| !!! | GAATTATTTCTTAAAATGTT+GGG | + | chr2_1:49152067-49152086 | None:intergenic | 15.0% |
| !!! | AGAATTATTTCTTAAAATGT+TGG | + | chr2_1:49152068-49152087 | None:intergenic | 15.0% |
| !! | ATAAATTATTTCAATACAGA+CGG | + | chr2_1:49152461-49152480 | None:intergenic | 15.0% |
| !! | TGAAATATAAGTAAAAGATA+CGG | + | chr2_1:49152667-49152686 | None:intergenic | 15.0% |
| !! | AAAAATTAATGACTGATATA+AGG | + | chr2_1:49152832-49152851 | None:intergenic | 15.0% |
| !! | CATGTTATATTTGAAAAATT+TGG | - | chr2_1:49153885-49153904 | Msa0209760:intron | 15.0% |
| !!! | ATAATTTTTAGTTTCTCTAA+GGG | + | chr2_1:49154181-49154200 | None:intergenic | 15.0% |
| !!! | AATAATTTTTAGTTTCTCTA+AGG | + | chr2_1:49154182-49154201 | None:intergenic | 15.0% |
| !!! | TTATTAGTTTTATCAATAAC+TGG | - | chr2_1:49154227-49154246 | Msa0209760:intron | 15.0% |
| !!! | TTCAGTGTTTTTTATTTTTT+TGG | - | chr2_1:49154407-49154426 | Msa0209760:intron | 15.0% |
| !!! | TCAGTGTTTTTTATTTTTTT+GGG | - | chr2_1:49154408-49154427 | Msa0209760:intron | 15.0% |
| !! | AGAATTATTCAAAGAATTTA+CGG | - | chr2_1:49154526-49154545 | Msa0209760:intron | 15.0% |
| !!! | AAGAACTTATTTTTGTATAA+TGG | - | chr2_1:49154858-49154877 | Msa0209760:intron | 15.0% |
| !! | GTTCTATTATTAATAGAATT+GGG | + | chr2_1:49154964-49154983 | None:intergenic | 15.0% |
| !! | AGTTCTATTATTAATAGAAT+TGG | + | chr2_1:49154965-49154984 | None:intergenic | 15.0% |
| !!! | TATTTTTATTTCTTCTAGTT+AGG | + | chr2_1:49155036-49155055 | None:intergenic | 15.0% |
| !! | ACTAGAAGAAATAAAAATAA+TGG | - | chr2_1:49155037-49155056 | Msa0209760:intron | 15.0% |
| !!! | TTTTTCCATTAATTTATAGA+TGG | - | chr2_1:49155278-49155297 | Msa0209760:intron | 15.0% |
| !! | TGTCAAAGCATAAATTAAAT+AGG | + | chr2_1:49151664-49151683 | None:intergenic | 20.0% |
| !!! | TCTTGTATAATTTTGTAGAT+GGG | - | chr2_1:49152545-49152564 | Msa0209760:intron | 20.0% |
| !! | AATGAGTTATTATCAATGAA+AGG | + | chr2_1:49152705-49152724 | None:intergenic | 20.0% |
| !!! | TGATGTTAAATTTCAAGTTA+AGG | + | chr2_1:49152734-49152753 | None:intergenic | 20.0% |
| !! | TCAATTACATAATCAAAACT+TGG | - | chr2_1:49153364-49153383 | Msa0209760:intron | 20.0% |
| !!! | ACAATGAAAATGAATAGTTT+TGG | - | chr2_1:49153542-49153561 | Msa0209760:intron | 20.0% |
| !!! | CAATGAAAATGAATAGTTTT+GGG | - | chr2_1:49153543-49153562 | Msa0209760:intron | 20.0% |
| !!! | AATGAAAATGAATAGTTTTG+GGG | - | chr2_1:49153544-49153563 | Msa0209760:intron | 20.0% |
| !!! | TAGTTTTTCAAAACACTTTA+GGG | + | chr2_1:49153614-49153633 | None:intergenic | 20.0% |
| !!! | ATAGTTTTTCAAAACACTTT+AGG | + | chr2_1:49153615-49153634 | None:intergenic | 20.0% |
| !!! | AAAAGCATATTTACACAATT+TGG | - | chr2_1:49153700-49153719 | Msa0209760:intron | 20.0% |
| !!! | TGAATTTTCAAAATGATCAA+AGG | - | chr2_1:49153912-49153931 | Msa0209760:intron | 20.0% |
| !! | TTCTTGACAATAAAAAATGA+GGG | + | chr2_1:49153971-49153990 | None:intergenic | 20.0% |
| !! | TTTCTTGACAATAAAAAATG+AGG | + | chr2_1:49153972-49153991 | None:intergenic | 20.0% |
| !!! | TTCCTTTTCATTGTATATAA+TGG | - | chr2_1:49154006-49154025 | Msa0209760:intron | 20.0% |
| !! | TACCATTATATACAATGAAA+AGG | + | chr2_1:49154011-49154030 | None:intergenic | 20.0% |
| !! | ATAGGATTTGTATTAATTTC+AGG | - | chr2_1:49154065-49154084 | Msa0209760:intron | 20.0% |
| !!! | TAATTTTTAGTTTCTCTAAG+GGG | + | chr2_1:49154180-49154199 | None:intergenic | 20.0% |
| !!! | CAGTGTTTTTTATTTTTTTG+GGG | - | chr2_1:49154409-49154428 | Msa0209760:intron | 20.0% |
| !!! | TTTATTTTTTTGGGGAAAAT+CGG | - | chr2_1:49154417-49154436 | Msa0209760:intron | 20.0% |
| !! | ATTATCAACAATTACTCTTA+AGG | - | chr2_1:49154763-49154782 | Msa0209760:CDS | 20.0% |
| !!! | GGAAAAGTAAATTTTTCTAA+TGG | - | chr2_1:49154825-49154844 | Msa0209760:intron | 20.0% |
| !! | TCTATTAATAATAGAACTAC+TGG | - | chr2_1:49154967-49154986 | Msa0209760:intron | 20.0% |
| !!! | TTGTTGACTAAAATGAATTA+AGG | + | chr2_1:49155538-49155557 | None:intergenic | 20.0% |
| !! | ATTTGTAATTGACATATTGT+AGG | + | chr2_1:49155680-49155699 | None:intergenic | 20.0% |
| !! | ACAATATGTCAATTACAAAT+TGG | - | chr2_1:49155680-49155699 | Msa0209760:intron | 20.0% |
| !!! | TTTTTTTTAAAGGAAAGTCA+TGG | - | chr2_1:49155838-49155857 | Msa0209760:intron | 20.0% |
| !! | ATGTATATTTGAACACAATT+TGG | - | chr2_1:49155899-49155918 | Msa0209760:intron | 20.0% |
| !!! | CAATCTATTTGATCATATTT+TGG | + | chr2_1:49156165-49156184 | None:intergenic | 20.0% |
| !!! | ATTTAGTTTTTTGTGATTGA+GGG | - | chr2_1:49156430-49156449 | Msa0209760:intron | 20.0% |
| !! | TAATTGTTATAAACTGCATT+TGG | - | chr2_1:49156697-49156716 | Msa0209760:exon | 20.0% |
| ! | AAAAAATATGAAACGAACCT+TGG | + | chr2_1:49150926-49150945 | None:intergenic | 25.0% |
| !! | AAAACAATTATTTAGGACAC+CGG | + | chr2_1:49151084-49151103 | None:intergenic | 25.0% |
| ! | TGCTCATATGAGTATTATAT+AGG | + | chr2_1:49151145-49151164 | None:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+TGG | + | chr2_1:49151218-49151237 | None:intergenic | 25.0% |
| ! | TGAGAAATGTTGATCAATTA+AGG | - | chr2_1:49151242-49151261 | Msa0209760:intron | 25.0% |
| ! | GAGAAATGTTGATCAATTAA+GGG | - | chr2_1:49151243-49151262 | Msa0209760:intron | 25.0% |
| !!! | TCCTATGTTTTTTACATTAG+CGG | - | chr2_1:49151473-49151492 | Msa0209760:intron | 25.0% |
| ! | TAATCTTCGTATTCGTATAA+AGG | - | chr2_1:49151820-49151839 | Msa0209760:intron | 25.0% |
| !! | TGACTCTTATTTGATTAAAC+AGG | + | chr2_1:49151864-49151883 | None:intergenic | 25.0% |
| ! | AGAGTCATTTGTAAATTAAC+AGG | - | chr2_1:49151877-49151896 | Msa0209760:intron | 25.0% |
| ! | TCATTTGTAAATTAACAGGA+CGG | - | chr2_1:49151881-49151900 | Msa0209760:intron | 25.0% |
| ! | TTTGAAGATCATCTTATTCT+TGG | - | chr2_1:49151948-49151967 | Msa0209760:intron | 25.0% |
| ! | TTGAAGATCATCTTATTCTT+GGG | - | chr2_1:49151949-49151968 | Msa0209760:intron | 25.0% |
| ! | GAATGAAATTACAAACCTAA+GGG | + | chr2_1:49152029-49152048 | None:intergenic | 25.0% |
| ! | TGAATGAAATTACAAACCTA+AGG | + | chr2_1:49152030-49152049 | None:intergenic | 25.0% |
| ! | TCATTTGAAGAATAGAGTAA+AGG | + | chr2_1:49152346-49152365 | None:intergenic | 25.0% |
| !! | GTCTTGTATAATTTTGTAGA+TGG | - | chr2_1:49152544-49152563 | Msa0209760:intron | 25.0% |
| !!! | TAAATTTCAAGTTAAGGCAT+AGG | + | chr2_1:49152728-49152747 | None:intergenic | 25.0% |
| ! | ATTAATGACTGATATAAGGT+TGG | + | chr2_1:49152828-49152847 | None:intergenic | 25.0% |
| !!! | GGATTGATTTAGATGAATTT+TGG | + | chr2_1:49153291-49153310 | None:intergenic | 25.0% |
| ! | TGTTCTCATATTTATAGAGA+AGG | + | chr2_1:49153525-49153544 | None:intergenic | 25.0% |
| !!! | AGTTTTTCAAAACACTTTAG+GGG | + | chr2_1:49153613-49153632 | None:intergenic | 25.0% |
| ! | TACAATGAAACATAAAGTCT+AGG | - | chr2_1:49153849-49153868 | Msa0209760:intron | 25.0% |
| ! | ACAATGAAACATAAAGTCTA+GGG | - | chr2_1:49153850-49153869 | Msa0209760:intron | 25.0% |
| ! | TAATGGTAGATAATGATAGT+TGG | - | chr2_1:49154023-49154042 | Msa0209760:intron | 25.0% |
| ! | AATGGTAGATAATGATAGTT+GGG | - | chr2_1:49154024-49154043 | Msa0209760:intron | 25.0% |
| ! | AAGGTATGAGAATTATATCA+GGG | + | chr2_1:49154263-49154282 | None:intergenic | 25.0% |
| ! | ATATAATTCTCATACCTTGT+AGG | - | chr2_1:49154265-49154284 | Msa0209760:intron | 25.0% |
| !!! | CAATTCACTTTTGTATTCTA+AGG | + | chr2_1:49154363-49154382 | None:intergenic | 25.0% |
| ! | ATCAAAGTCAAGAAAATGAT+TGG | + | chr2_1:49154612-49154631 | None:intergenic | 25.0% |
| ! | TTAACAACAAGAGGTTTATT+AGG | - | chr2_1:49154929-49154948 | Msa0209760:intron | 25.0% |
| ! | AAGAGGTTTATTAGGAAATT+AGG | - | chr2_1:49154937-49154956 | Msa0209760:intron | 25.0% |
| ! | ACAAGTTTACTATGTTCTTA+CGG | + | chr2_1:49155168-49155187 | None:intergenic | 25.0% |
| ! | CTCTACCATCTATAAATTAA+TGG | + | chr2_1:49155286-49155305 | None:intergenic | 25.0% |
| ! | CATTAATTTATAGATGGTAG+AGG | - | chr2_1:49155284-49155303 | Msa0209760:intron | 25.0% |
| !!! | TGTTTTTGATAGATCTGTTT+TGG | - | chr2_1:49155350-49155369 | Msa0209760:intron | 25.0% |
| ! | CAAATTGATCGTTAAAGAAA+AGG | + | chr2_1:49155443-49155462 | None:intergenic | 25.0% |
| ! | TTTCTTTAACGATCAATTTG+TGG | - | chr2_1:49155443-49155462 | Msa0209760:CDS | 25.0% |
| !!! | TTAATAAAACTTGTTAGAGC+AGG | + | chr2_1:49155478-49155497 | None:intergenic | 25.0% |
| ! | GACTAAAATGAATTAAGGAA+TGG | + | chr2_1:49155533-49155552 | None:intergenic | 25.0% |
| !! | TTCTATAAAGAAGCTTGTTT+AGG | + | chr2_1:49155583-49155602 | None:intergenic | 25.0% |
| ! | TAATTGACATATTGTAGGTT+GGG | + | chr2_1:49155675-49155694 | None:intergenic | 25.0% |
| ! | TTAACATAGCTCAAAATATG+TGG | + | chr2_1:49156052-49156071 | None:intergenic | 25.0% |
| !!! | CATTTAGTTTTTTGTGATTG+AGG | - | chr2_1:49156429-49156448 | Msa0209760:intron | 25.0% |
| !!! | TTTAGTTTTTTGTGATTGAG+GGG | - | chr2_1:49156431-49156450 | Msa0209760:intron | 25.0% |
| !!! | AGGGAATTGATTTTTCATTA+TGG | - | chr2_1:49156516-49156535 | Msa0209760:CDS | 25.0% |
| ! | GAAACAAGAAAAACATTTGT+TGG | + | chr2_1:49156594-49156613 | None:intergenic | 25.0% |
| ! | AACACAATCTCTATTCCTTT+TGG | - | chr2_1:49150625-49150644 | Msa0209760:three_prime_UTR | 30.0% |
| TGAAGAACAACTCTATTCAA+GGG | - | chr2_1:49150825-49150844 | Msa0209760:exon | 30.0% | |
| AATACTCATATGAGCAGTTT+CGG | - | chr2_1:49151149-49151168 | Msa0209760:intron | 30.0% | |
| GGTCAAATACAATGATATCT+TGG | - | chr2_1:49151337-49151356 | Msa0209760:intron | 30.0% | |
| ATGACATAAATTGCTCAAGT+TGG | - | chr2_1:49151376-49151395 | Msa0209760:intron | 30.0% | |
| ACCGCTAATGTAAAAAACAT+AGG | + | chr2_1:49151477-49151496 | None:intergenic | 30.0% | |
| ATATAACCAACGAAGGTAAT+TGG | + | chr2_1:49151688-49151707 | None:intergenic | 30.0% | |
| GTATAAAGGATTAACTGACT+TGG | - | chr2_1:49151750-49151769 | Msa0209760:intron | 30.0% | |
| TGAAGATCATCTTATTCTTG+GGG | - | chr2_1:49151950-49151969 | Msa0209760:intron | 30.0% | |
| TCTTAAAATGTTGGGGAAAA+AGG | + | chr2_1:49152059-49152078 | None:intergenic | 30.0% | |
| AGAAACTCCAAATTCAAACA+GGG | + | chr2_1:49152147-49152166 | None:intergenic | 30.0% | |
| AAGAAACTCCAAATTCAAAC+AGG | + | chr2_1:49152148-49152167 | None:intergenic | 30.0% | |
| TGAAAGGAAGAACATAATGA+AGG | + | chr2_1:49152196-49152215 | None:intergenic | 30.0% | |
| CTTGTGTTAGTTCATAGAAT+AGG | + | chr2_1:49152233-49152252 | None:intergenic | 30.0% | |
| TCTATGAACTAACACAAGTA+TGG | - | chr2_1:49152235-49152254 | Msa0209760:intron | 30.0% | |
| AAGAATAGAGTAAAGGAACT+GGG | + | chr2_1:49152339-49152358 | None:intergenic | 30.0% | |
| TACAAAGAACACAAGCAAAA+AGG | + | chr2_1:49152373-49152392 | None:intergenic | 30.0% | |
| ATCGAGAAGCAAAAAACAAA+TGG | + | chr2_1:49152776-49152795 | None:intergenic | 30.0% | |
| ! | GATGAGATATCCTCTAAAAA+GGG | - | chr2_1:49152793-49152812 | Msa0209760:intron | 30.0% |
| !! | ACTGATATAAGGTTGGTTTA+TGG | + | chr2_1:49152821-49152840 | None:intergenic | 30.0% |
| ATGGAATTTAGTGGTGTTTA+TGG | + | chr2_1:49152924-49152943 | None:intergenic | 30.0% | |
| ! | CTTTTCTAGATGGAATTTAG+TGG | + | chr2_1:49152933-49152952 | None:intergenic | 30.0% |
| !!! | AAAATAGCTGCTTTTCTAGA+TGG | + | chr2_1:49152943-49152962 | None:intergenic | 30.0% |
| !! | GAAAAGCAGCTATTTTCTAT+TGG | - | chr2_1:49152947-49152966 | Msa0209760:intron | 30.0% |
| ! | TTTTCTATTGGAGTTGTATG+AGG | - | chr2_1:49152959-49152978 | Msa0209760:intron | 30.0% |
| TACCTTAATCTTTATCCTGT+AGG | - | chr2_1:49153032-49153051 | Msa0209760:intron | 30.0% | |
| ACCTTAATCTTTATCCTGTA+GGG | - | chr2_1:49153033-49153052 | Msa0209760:intron | 30.0% | |
| ! | AATTTTCTGATGTGTGTGTA+TGG | - | chr2_1:49153145-49153164 | Msa0209760:intron | 30.0% |
| ! | ATTTTCTGATGTGTGTGTAT+GGG | - | chr2_1:49153146-49153165 | Msa0209760:intron | 30.0% |
| ! | TAATCTGTCTAGAATCTGTT+AGG | + | chr2_1:49153312-49153331 | None:intergenic | 30.0% |
| AACAGATTCTAGACAGATTA+TGG | - | chr2_1:49153312-49153331 | Msa0209760:intron | 30.0% | |
| AATGAGACATGCATTAGTTA+TGG | - | chr2_1:49153461-49153480 | Msa0209760:intron | 30.0% | |
| CATGGAATCTTATGATTATG+TGG | + | chr2_1:49153587-49153606 | None:intergenic | 30.0% | |
| CACATAATCATAAGATTCCA+TGG | - | chr2_1:49153585-49153604 | Msa0209760:intron | 30.0% | |
| ! | TTAATTCTATTTGATAGCCC+TGG | + | chr2_1:49153682-49153701 | None:intergenic | 30.0% |
| AAATAGGTTCGTATGAACAA+GGG | + | chr2_1:49153757-49153776 | None:intergenic | 30.0% | |
| TAAATAGGTTCGTATGAACA+AGG | + | chr2_1:49153758-49153777 | None:intergenic | 30.0% | |
| ACACAGTTCAAAAGAAAGTT+TGG | + | chr2_1:49153938-49153957 | None:intergenic | 30.0% | |
| ATGGTAGATAATGATAGTTG+GGG | - | chr2_1:49154025-49154044 | Msa0209760:intron | 30.0% | |
| !! | TAATTTCAGGTTGAGTTTGT+TGG | - | chr2_1:49154078-49154097 | Msa0209760:intron | 30.0% |
| CAAGGTATGAGAATTATATC+AGG | + | chr2_1:49154264-49154283 | None:intergenic | 30.0% | |
| CTGAAATGATGATATGATCA+AGG | + | chr2_1:49154392-49154411 | None:intergenic | 30.0% | |
| ! | TTTTCTTGACTTTGATGCTT+AGG | - | chr2_1:49154616-49154635 | Msa0209760:intron | 30.0% |
| TTTCTTGACTTTGATGCTTA+GGG | - | chr2_1:49154617-49154636 | Msa0209760:intron | 30.0% | |
| CTTGCTTGAATCTCAAAATT+AGG | + | chr2_1:49154789-49154808 | None:intergenic | 30.0% | |
| TAGAAGACTTGCAAATTCAA+AGG | - | chr2_1:49154899-49154918 | Msa0209760:intron | 30.0% | |
| ACAATCAATACTCTCCTTTA+AGG | - | chr2_1:49155088-49155107 | Msa0209760:intron | 30.0% | |
| TCAAATATGTAAGCTATCCT+AGG | - | chr2_1:49155139-49155158 | Msa0209760:intron | 30.0% | |
| CAAGTTTACTATGTTCTTAC+GGG | + | chr2_1:49155167-49155186 | None:intergenic | 30.0% | |
| !!! | AGATCTGTTTTGGTATCAAA+CGG | - | chr2_1:49155360-49155379 | Msa0209760:intron | 30.0% |
| TAAGGAATGGATAAAGTAGT+CGG | + | chr2_1:49155520-49155539 | None:intergenic | 30.0% | |
| ATAGAAACAGAGTCATATGT+TGG | - | chr2_1:49155597-49155616 | Msa0209760:intron | 30.0% | |
| GTAATTGACATATTGTAGGT+TGG | + | chr2_1:49155676-49155695 | None:intergenic | 30.0% | |
| CAATTTGGATAAGTAATGCA+CGG | - | chr2_1:49155914-49155933 | Msa0209760:intron | 30.0% | |
| TCAAAATATGTGGATGATGA+AGG | + | chr2_1:49156042-49156061 | None:intergenic | 30.0% | |
| !!! | TTTGACGACAATAGTTTTGA+GGG | + | chr2_1:49156075-49156094 | None:intergenic | 30.0% |
| !! | ATTTGACGACAATAGTTTTG+AGG | + | chr2_1:49156076-49156095 | None:intergenic | 30.0% |
| ! | TACTCGCTAATTTTCCATTT+GGG | - | chr2_1:49156134-49156153 | Msa0209760:intron | 30.0% |
| ! | AAATAGATTGTAGCTGACTT+GGG | - | chr2_1:49156175-49156194 | Msa0209760:intron | 30.0% |
| ATGATATCGATAGATCTTAG+AGG | + | chr2_1:49156275-49156294 | None:intergenic | 30.0% | |
| AGTAAGTCACTTAATTGACT+AGG | - | chr2_1:49156374-49156393 | Msa0209760:intron | 30.0% | |
| AAATGAGCTATGAGATGGAT+GGG | + | chr2_1:49150656-49150675 | None:intergenic | 35.0% | |
| AAAATGAGCTATGAGATGGA+TGG | + | chr2_1:49150657-49150676 | None:intergenic | 35.0% | |
| GATCAAAATGAGCTATGAGA+TGG | + | chr2_1:49150661-49150680 | None:intergenic | 35.0% | |
| !!! | AAATAGTTTTGTAGCTGCTG+CGG | + | chr2_1:49150716-49150735 | None:intergenic | 35.0% |
| CTGAAGAACAACTCTATTCA+AGG | - | chr2_1:49150824-49150843 | Msa0209760:exon | 35.0% | |
| TTTAAGAGCAGTGGCATTAA+TGG | - | chr2_1:49150961-49150980 | Msa0209760:intron | 35.0% | |
| TTAAGAGCAGTGGCATTAAT+GGG | - | chr2_1:49150962-49150981 | Msa0209760:intron | 35.0% | |
| ATTATATAGGTGTCAGACAC+CGG | + | chr2_1:49151132-49151151 | None:intergenic | 35.0% | |
| GCGATATTAGACTATGATAC+AGG | + | chr2_1:49151571-49151590 | None:intergenic | 35.0% | |
| ! | TACCTTCGTTGGTTATATAC+AGG | - | chr2_1:49151690-49151709 | Msa0209760:intron | 35.0% |
| AACCTGTATATAACCAACGA+AGG | + | chr2_1:49151695-49151714 | None:intergenic | 35.0% | |
| TGGTTATATACAGGTTGTGA+TGG | - | chr2_1:49151699-49151718 | Msa0209760:intron | 35.0% | |
| CCTTTATACGTAATATCCCT+TGG | + | chr2_1:49151739-49151758 | None:intergenic | 35.0% | |
| CCAAGGGATATTACGTATAA+AGG | - | chr2_1:49151736-49151755 | Msa0209760:intron | 35.0% | |
| ATCAATGCACCAGAGATAAT+CGG | + | chr2_1:49152006-49152025 | None:intergenic | 35.0% | |
| TTAAGCATACAACTAGATGC+TGG | - | chr2_1:49152092-49152111 | Msa0209760:intron | 35.0% | |
| TTGAATGTAACCACATGTGT+CGG | - | chr2_1:49152300-49152319 | Msa0209760:intron | 35.0% | |
| ATACATATAACCGACACATG+TGG | + | chr2_1:49152313-49152332 | None:intergenic | 35.0% | |
| GAAGAATAGAGTAAAGGAAC+TGG | + | chr2_1:49152340-49152359 | None:intergenic | 35.0% | |
| !! | TTGTTGTTTCATGGATCACT+TGG | - | chr2_1:49152506-49152525 | Msa0209760:intron | 35.0% |
| ! | CGATGAGATATCCTCTAAAA+AGG | - | chr2_1:49152792-49152811 | Msa0209760:intron | 35.0% |
| ! | GTTTATGGTACCCTTTTTAG+AGG | + | chr2_1:49152806-49152825 | None:intergenic | 35.0% |
| GCAGACTATAGAATCGTATA+AGG | + | chr2_1:49152858-49152877 | None:intergenic | 35.0% | |
| GTGTTTATGGAGATTCTACT+GGG | + | chr2_1:49152911-49152930 | None:intergenic | 35.0% | |
| ! | TTTTCTGATGTGTGTGTATG+GGG | - | chr2_1:49153147-49153166 | Msa0209760:intron | 35.0% |
| !! | CTTTATCCTTGTTTCAGGTT+CGG | + | chr2_1:49153221-49153240 | None:intergenic | 35.0% |
| GAACCTGAAACAAGGATAAA+GGG | - | chr2_1:49153220-49153239 | Msa0209760:intron | 35.0% | |
| TAGAGAAGGAAATGAATGTG+TGG | + | chr2_1:49153511-49153530 | None:intergenic | 35.0% | |
| AATAGGTTCGTATGAACAAG+GGG | + | chr2_1:49153756-49153775 | None:intergenic | 35.0% | |
| TGTTGTTAAGAATGCACTTG+AGG | + | chr2_1:49153813-49153832 | None:intergenic | 35.0% | |
| GCAAAACAGGATATGCTAAT+AGG | - | chr2_1:49154047-49154066 | Msa0209760:intron | 35.0% | |
| TAATTCTCATACCTTGTAGG+TGG | - | chr2_1:49154268-49154287 | Msa0209760:intron | 35.0% | |
| TGCAACTAATCAGGTGATTA+TGG | - | chr2_1:49154327-49154346 | Msa0209760:intron | 35.0% | |
| GTGTAACCTTCATTTCTTTC+AGG | - | chr2_1:49154439-49154458 | Msa0209760:intron | 35.0% | |
| TAACCTTCATTTCTTTCAGG+TGG | - | chr2_1:49154442-49154461 | Msa0209760:intron | 35.0% | |
| TAATTCTATGTTAGTAGCCC+AGG | + | chr2_1:49154513-49154532 | None:intergenic | 35.0% | |
| TGGGAATTGTAGAAGCTTAT+TGG | - | chr2_1:49154687-49154706 | Msa0209760:intron | 35.0% | |
| GGGAATTGTAGAAGCTTATT+GGG | - | chr2_1:49154688-49154707 | Msa0209760:intron | 35.0% | |
| TTGAGATTCAAGCAAGTGTT+TGG | - | chr2_1:49154793-49154812 | Msa0209760:CDS | 35.0% | |
| TGAGATTCAAGCAAGTGTTT+GGG | - | chr2_1:49154794-49154813 | Msa0209760:CDS | 35.0% | |
| CTTGCAAATTCAAAGGCTTT+AGG | - | chr2_1:49154906-49154925 | Msa0209760:intron | 35.0% | |
| CTCACATATATGCTCCTTAA+AGG | + | chr2_1:49155105-49155124 | None:intergenic | 35.0% | |
| !! | TTAGTCTCTGATTTTGCTGT+TGG | - | chr2_1:49155400-49155419 | Msa0209760:CDS | 35.0% |
| !!! | TAGTCTCTGATTTTGCTGTT+GGG | - | chr2_1:49155401-49155420 | Msa0209760:CDS | 35.0% |
| GTATCAATTTGCAACTTGCA+AGG | + | chr2_1:49155561-49155580 | None:intergenic | 35.0% | |
| CAAAAGGCTGTATATAAGCA+GGG | + | chr2_1:49155795-49155814 | None:intergenic | 35.0% | |
| ! | CTGCTTATATACAGCCTTTT+GGG | - | chr2_1:49155794-49155813 | Msa0209760:intron | 35.0% |
| ! | TGCTTATATACAGCCTTTTG+GGG | - | chr2_1:49155795-49155814 | Msa0209760:intron | 35.0% |
| TCGTAGTTAATTGTGATACG+TGG | - | chr2_1:49155977-49155996 | Msa0209760:intron | 35.0% | |
| ! | GTACTCGCTAATTTTCCATT+TGG | - | chr2_1:49156133-49156152 | Msa0209760:intron | 35.0% |
| ! | ACTCGCTAATTTTCCATTTG+GGG | - | chr2_1:49156135-49156154 | Msa0209760:intron | 35.0% |
| !!! | ATATTTTGGTTCACCCCAAA+TGG | + | chr2_1:49156151-49156170 | None:intergenic | 35.0% |
| CAAATAGATTGTAGCTGACT+TGG | - | chr2_1:49156174-49156193 | Msa0209760:intron | 35.0% | |
| TATGTGTATTTCACAGCTTC+TGG | - | chr2_1:49156457-49156476 | Msa0209760:intron | 35.0% | |
| AACAGAGGGCTTAAAAAGTA+AGG | - | chr2_1:49156496-49156515 | Msa0209760:CDS | 35.0% | |
| ACAGAGGGCTTAAAAAGTAA+GGG | - | chr2_1:49156497-49156516 | Msa0209760:CDS | 35.0% | |
| TTCATTATGGTACAAACCTG+AGG | - | chr2_1:49156529-49156548 | Msa0209760:CDS | 35.0% | |
| ACTATGTCTCTAACAGCAAT+AGG | - | chr2_1:49156620-49156639 | Msa0209760:CDS | 35.0% | |
| CTATGTCTCTAACAGCAATA+GGG | - | chr2_1:49156621-49156640 | Msa0209760:CDS | 35.0% | |
| ! | TTCGAGAGGTTTGACTTTGA+AGG | + | chr2_1:49150756-49150775 | None:intergenic | 40.0% |
| AAAGTCAAACCTCTCGAAGT+TGG | - | chr2_1:49150758-49150777 | Msa0209760:three_prime_UTR | 40.0% | |
| GAACAACTCTATTCAAGGGT+TGG | - | chr2_1:49150829-49150848 | Msa0209760:exon | 40.0% | |
| ACTACGCTATTTAAGAGCAG+TGG | - | chr2_1:49150952-49150971 | Msa0209760:intron | 40.0% | |
| TAAGAGCAGTGGCATTAATG+GGG | - | chr2_1:49150963-49150982 | Msa0209760:intron | 40.0% | |
| TTGAGATGTCCAATGAAGCA+CGG | - | chr2_1:49150991-49151010 | Msa0209760:intron | 40.0% | |
| ACTCTTGTATCTATGGTGTG+CGG | + | chr2_1:49151211-49151230 | None:intergenic | 40.0% | |
| TGACATCCAATTACCTTCGT+TGG | - | chr2_1:49151679-49151698 | Msa0209760:intron | 40.0% | |
| TGGATGCTGTTAATAAGCCA+AGG | - | chr2_1:49151719-49151738 | Msa0209760:intron | 40.0% | |
| GGATGCTGTTAATAAGCCAA+GGG | - | chr2_1:49151720-49151739 | Msa0209760:intron | 40.0% | |
| CGAAGCTGCAATATTAGAAG+TGG | - | chr2_1:49151914-49151933 | Msa0209760:intron | 40.0% | |
| CATCTTATTCTTGGGGAAGA+AGG | - | chr2_1:49151957-49151976 | Msa0209760:intron | 40.0% | |
| ATGTAGCTTCCGATTATCTC+TGG | - | chr2_1:49151994-49152013 | Msa0209760:intron | 40.0% | |
| CCAAATTCAAACAGGGCAAA+AGG | + | chr2_1:49152140-49152159 | None:intergenic | 40.0% | |
| ! | CCTTTTGCCCTGTTTGAATT+TGG | - | chr2_1:49152137-49152156 | Msa0209760:intron | 40.0% |
| GGACACATACTACGAATGAA+AGG | + | chr2_1:49152212-49152231 | None:intergenic | 40.0% | |
| GCTTGTGTTCTTTGTATGTG+AGG | - | chr2_1:49152377-49152396 | Msa0209760:intron | 40.0% | |
| CATGAAACAACAAATGCACG+AGG | + | chr2_1:49152499-49152518 | None:intergenic | 40.0% | |
| !! | CTCGTGCATTTGTTGTTTCA+TGG | - | chr2_1:49152497-49152516 | Msa0209760:intron | 40.0% |
| TCTGTTGGAGTTCTATATCG+AGG | - | chr2_1:49152607-49152626 | Msa0209760:intron | 40.0% | |
| ATGCCTCATCTCTTCCATTT+AGG | - | chr2_1:49152878-49152897 | Msa0209760:CDS | 40.0% | |
| TGCCTCATCTCTTCCATTTA+GGG | - | chr2_1:49152879-49152898 | Msa0209760:CDS | 40.0% | |
| ATGGAGATTCTACTGGGATA+TGG | + | chr2_1:49152905-49152924 | None:intergenic | 40.0% | |
| GGTGTTTATGGAGATTCTAC+TGG | + | chr2_1:49152912-49152931 | None:intergenic | 40.0% | |
| CTATTGGAGTTGTATGAGGA+AGG | - | chr2_1:49152963-49152982 | Msa0209760:intron | 40.0% | |
| GCCCTACAGGATAAAGATTA+AGG | + | chr2_1:49153037-49153056 | None:intergenic | 40.0% | |
| AACTGAGTCAAGATGGATAG+TGG | + | chr2_1:49153068-49153087 | None:intergenic | 40.0% | |
| ACTTCACAACTGAGTCAAGA+TGG | + | chr2_1:49153075-49153094 | None:intergenic | 40.0% | |
| CGAACCTGAAACAAGGATAA+AGG | - | chr2_1:49153219-49153238 | Msa0209760:intron | 40.0% | |
| ! | TGTCCCTTTATCCTTGTTTC+AGG | + | chr2_1:49153226-49153245 | None:intergenic | 40.0% |
| AATGTGTGGATCAGCATAGT+TGG | + | chr2_1:49153497-49153516 | None:intergenic | 40.0% | |
| ! | AAAACACTTTAGGGGTTCCA+TGG | + | chr2_1:49153605-49153624 | None:intergenic | 40.0% |
| AATGATAGTTGGGGCAAAAC+AGG | - | chr2_1:49154034-49154053 | Msa0209760:intron | 40.0% | |
| !! | TTTCAGGTTGAGTTTGTTGG+TGG | - | chr2_1:49154081-49154100 | Msa0209760:intron | 40.0% |
| ATGCGAGTATTCCAACACAT+AGG | + | chr2_1:49154108-49154127 | None:intergenic | 40.0% | |
| !! | TCTAAGGGGTTGATAGAAGT+TGG | + | chr2_1:49154166-49154185 | None:intergenic | 40.0% |
| GTTCCACCTGAAAGAAATGA+AGG | + | chr2_1:49154448-49154467 | None:intergenic | 40.0% | |
| ! | TCTCTTCTAGTGACAGGTTT+TGG | - | chr2_1:49154470-49154489 | Msa0209760:intron | 40.0% |
| ! | CTCTTCTAGTGACAGGTTTT+GGG | - | chr2_1:49154471-49154490 | Msa0209760:intron | 40.0% |
| AAGAATTTACGGATGTCAGC+AGG | - | chr2_1:49154537-49154556 | Msa0209760:intron | 40.0% | |
| AGAATTTACGGATGTCAGCA+GGG | - | chr2_1:49154538-49154557 | Msa0209760:intron | 40.0% | |
| TTGATGCTTAGGGTGTAAGA+CGG | - | chr2_1:49154627-49154646 | Msa0209760:intron | 40.0% | |
| ! | GGAATATCGTCTAAAGCCAT+GGG | - | chr2_1:49154709-49154728 | Msa0209760:intron | 40.0% |
| !! | GGCTTTAGGTTAACAACAAG+AGG | - | chr2_1:49154920-49154939 | Msa0209760:intron | 40.0% |
| TGGTAACTAAGAATGATCGC+AGG | - | chr2_1:49154987-49155006 | Msa0209760:intron | 40.0% | |
| TTATAGATGGTAGAGGAAGC+TGG | - | chr2_1:49155291-49155310 | Msa0209760:intron | 40.0% | |
| ATCAGAGACTAACCTTAGCA+TGG | + | chr2_1:49155392-49155411 | None:intergenic | 40.0% | |
| ! | AGAGTCATATGTTGGCTAAG+CGG | - | chr2_1:49155605-49155624 | Msa0209760:intron | 40.0% |
| ! | TTGGGCTGAATTGACTTATG+AGG | + | chr2_1:49155657-49155676 | None:intergenic | 40.0% |
| CCAAAAGGCTGTATATAAGC+AGG | + | chr2_1:49155796-49155815 | None:intergenic | 40.0% | |
| ! | CCTGCTTATATACAGCCTTT+TGG | - | chr2_1:49155793-49155812 | Msa0209760:intron | 40.0% |
| ! | GCTTATATACAGCCTTTTGG+GGG | - | chr2_1:49155796-49155815 | Msa0209760:intron | 40.0% |
| ! | CTTATATACAGCCTTTTGGG+GGG | - | chr2_1:49155797-49155816 | Msa0209760:intron | 40.0% |
| !! | ATTAATTTGCACCCCCCAAA+AGG | + | chr2_1:49155811-49155830 | None:intergenic | 40.0% |
| TGGATAAGTAATGCACGGAT+AGG | - | chr2_1:49155919-49155938 | Msa0209760:intron | 40.0% | |
| TAATTGTGATACGTGGAACG+TGG | - | chr2_1:49155984-49156003 | Msa0209760:intron | 40.0% | |
| GTCACTTAATTGACTAGGAG+TGG | - | chr2_1:49156379-49156398 | Msa0209760:intron | 40.0% | |
| ! | TTGACTTTGAAGGCGGTAAG+TGG | + | chr2_1:49150746-49150765 | None:intergenic | 45.0% |
| ! | GAGAGGTTTGACTTTGAAGG+CGG | + | chr2_1:49150753-49150772 | None:intergenic | 45.0% |
| AAGAGCAGTGGCATTAATGG+GGG | - | chr2_1:49150964-49150983 | Msa0209760:intron | 45.0% | |
| ATCTCCTATGAAGCATGCAC+TGG | + | chr2_1:49151546-49151565 | None:intergenic | 45.0% | |
| !! | ACTGACTTGGTGACTGAGTA+AGG | - | chr2_1:49151763-49151782 | Msa0209760:intron | 45.0% |
| CTTATTCTTGGGGAAGAAGG+AGG | - | chr2_1:49151960-49151979 | Msa0209760:intron | 45.0% | |
| GGGACAACAAACTTTGCACA+TGG | - | chr2_1:49152565-49152584 | Msa0209760:intron | 45.0% | |
| CCAACAGAAACAGCAAAGCT+GGG | + | chr2_1:49152595-49152614 | None:intergenic | 45.0% | |
| TCCAACAGAAACAGCAAAGC+TGG | + | chr2_1:49152596-49152615 | None:intergenic | 45.0% | |
| AAATCCTACTGCTGCTACAG+TGG | - | chr2_1:49152630-49152649 | Msa0209760:intron | 45.0% | |
| TACTGGGATATGGCCCTAAA+TGG | + | chr2_1:49152895-49152914 | None:intergenic | 45.0% | |
| TCAGTTGTGAAGTGACGTCT+CGG | - | chr2_1:49153082-49153101 | Msa0209760:CDS | 45.0% | |
| !! | CTTGATTTCTGGCCTACCAA+CGG | - | chr2_1:49153109-49153128 | Msa0209760:intron | 45.0% |
| ! | ATTCCTTCTCCGTTTTCCGT+TGG | + | chr2_1:49153128-49153147 | None:intergenic | 45.0% |
| TCAGCACTGCTATGCTATCT+GGG | + | chr2_1:49153194-49153213 | None:intergenic | 45.0% | |
| TCATACCCCTTGTTCATACC+AGG | - | chr2_1:49153661-49153680 | Msa0209760:intron | 45.0% | |
| CATACCCCTTGTTCATACCA+GGG | - | chr2_1:49153662-49153681 | Msa0209760:intron | 45.0% | |
| ATAGCCCTGGTATGAACAAG+GGG | + | chr2_1:49153669-49153688 | None:intergenic | 45.0% | |
| GATAGCCCTGGTATGAACAA+GGG | + | chr2_1:49153670-49153689 | None:intergenic | 45.0% | |
| TGATAGCCCTGGTATGAACA+AGG | + | chr2_1:49153671-49153690 | None:intergenic | 45.0% | |
| !! | TTGTTGGTGGTCCTATGTGT+TGG | - | chr2_1:49154094-49154113 | Msa0209760:intron | 45.0% |
| TTCTCATACCTTGTAGGTGG+TGG | - | chr2_1:49154271-49154290 | Msa0209760:intron | 45.0% | |
| TTGCACTCACTTCGATCCTT+TGG | + | chr2_1:49154312-49154331 | None:intergenic | 45.0% | |
| CGAAGTGAGTGCAACTAATC+AGG | - | chr2_1:49154318-49154337 | Msa0209760:intron | 45.0% | |
| GAACGATCTCTTCTAGTGAC+AGG | - | chr2_1:49154464-49154483 | Msa0209760:intron | 45.0% | |
| GTATGAACACGATGAAGCCT+GGG | - | chr2_1:49154493-49154512 | Msa0209760:intron | 45.0% | |
| GACATGTGTCATGTGGCTTT+GGG | - | chr2_1:49154668-49154687 | Msa0209760:intron | 45.0% | |
| ! | GGGAATATCGTCTAAAGCCA+TGG | - | chr2_1:49154708-49154727 | Msa0209760:intron | 45.0% |
| ! | TCGTCTAAAGCCATGGGATA+TGG | - | chr2_1:49154715-49154734 | Msa0209760:intron | 45.0% |
| !! | GCAAGTGTTTGGGTTTTGTG+TGG | - | chr2_1:49154804-49154823 | Msa0209760:CDS | 45.0% |
| CTATGTTCTTACGGGTTCCT+AGG | + | chr2_1:49155159-49155178 | None:intergenic | 45.0% | |
| ! | ACTTGTTAGAGCAGGTGAAG+TGG | + | chr2_1:49155470-49155489 | None:intergenic | 45.0% |
| ! | TCACAGCTTCTGGAGAGAAT+TGG | - | chr2_1:49156467-49156486 | Msa0209760:intron | 45.0% |
| AGAATTGGACCTGCAACAGA+GGG | - | chr2_1:49156482-49156501 | Msa0209760:CDS | 45.0% | |
| !! | CTTTTTAAGCCCTCTGTTGC+AGG | + | chr2_1:49156494-49156513 | None:intergenic | 45.0% |
| !! | ATGAATAAATAATAAAATAA+AGG | - | chr2_1:49151316-49151335 | Msa0209760:intron | 5.0% |
| GATGGATGGGTGGAACCAAA+AGG | + | chr2_1:49150643-49150662 | None:intergenic | 50.0% | |
| TGAGCTATGAGATGGATGGG+TGG | + | chr2_1:49150653-49150672 | None:intergenic | 50.0% | |
| !!! | TAGTTTTGTAGCTGCTGCGG+AGG | + | chr2_1:49150713-49150732 | None:intergenic | 50.0% |
| ! | CTTTGAAGGCGGTAAGTGGT+AGG | + | chr2_1:49150742-49150761 | None:intergenic | 50.0% |
| GTCAAACCTCTCGAAGTTGG+AGG | - | chr2_1:49150761-49150780 | Msa0209760:three_prime_UTR | 50.0% | |
| TTTCAGCCTCCAACTTCGAG+AGG | + | chr2_1:49150770-49150789 | None:intergenic | 50.0% | |
| ! | AAGGAGGATCGCAGGTTGAA+CGG | + | chr2_1:49150872-49150891 | None:intergenic | 50.0% |
| CAGTTGTGGCAACTTGAAGG+AGG | + | chr2_1:49150888-49150907 | None:intergenic | 50.0% | |
| CAGCAGTTGTGGCAACTTGA+AGG | + | chr2_1:49150891-49150910 | None:intergenic | 50.0% | |
| !! | TAGAGGTGTCCGTGCTTCAT+TGG | + | chr2_1:49151003-49151022 | None:intergenic | 50.0% |
| AATGAAGCACGGACACCTCT+AGG | - | chr2_1:49151002-49151021 | Msa0209760:intron | 50.0% | |
| ! | TACGGGTGTCATAGGAGTGT+CGG | + | chr2_1:49151047-49151066 | None:intergenic | 50.0% |
| TACTTCGACACTCCTACGAC+CGG | - | chr2_1:49151110-49151129 | Msa0209760:intron | 50.0% | |
| TCTATGGTGTGCGGAAGCAA+GGG | + | chr2_1:49151202-49151221 | None:intergenic | 50.0% | |
| ATCTATGGTGTGCGGAAGCA+AGG | + | chr2_1:49151203-49151222 | None:intergenic | 50.0% | |
| GAGTCCAGTGCATGCTTCAT+AGG | - | chr2_1:49151539-49151558 | Msa0209760:intron | 50.0% | |
| !! | GGGGAAGAAGGAGGCATTAT+AGG | - | chr2_1:49151969-49151988 | Msa0209760:intron | 50.0% |
| ! | CTCTGGTGCATTGATCCCTT+AGG | - | chr2_1:49152011-49152030 | Msa0209760:CDS | 50.0% |
| !! | CCCAGCTTTGCTGTTTCTGT+TGG | - | chr2_1:49152592-49152611 | Msa0209760:intron | 50.0% |
| ATCACCACTGTAGCAGCAGT+AGG | + | chr2_1:49152637-49152656 | None:intergenic | 50.0% | |
| GGCCCTAAATGGAAGAGATG+AGG | + | chr2_1:49152884-49152903 | None:intergenic | 50.0% | |
| ! | GTCTCGGTGGACTTGATTTC+TGG | - | chr2_1:49153098-49153117 | Msa0209760:intron | 50.0% |
| TCTGGCCTACCAACGGAAAA+CGG | - | chr2_1:49153116-49153135 | Msa0209760:intron | 50.0% | |
| ! | CTTCTCCGTTTTCCGTTGGT+AGG | + | chr2_1:49153124-49153143 | None:intergenic | 50.0% |
| CTACCAACGGAAAACGGAGA+AGG | - | chr2_1:49153122-49153141 | Msa0209760:intron | 50.0% | |
| CTCAGCACTGCTATGCTATC+TGG | + | chr2_1:49153195-49153214 | None:intergenic | 50.0% | |
| GAGTAGCCGAACCTGAAACA+AGG | - | chr2_1:49153212-49153231 | Msa0209760:intron | 50.0% | |
| AAGGATAAAGGGACAGCGTG+TGG | - | chr2_1:49153231-49153250 | Msa0209760:intron | 50.0% | |
| GACTGCAGTGCTGTGACATA+TGG | + | chr2_1:49153643-49153662 | None:intergenic | 50.0% | |
| ! | CGCATTTTCACTGCAACTGC+TGG | - | chr2_1:49154123-49154142 | Msa0209760:intron | 50.0% |
| AGAATGCTCCACCACCTACA+AGG | + | chr2_1:49154282-49154301 | None:intergenic | 50.0% | |
| GGTATGAACACGATGAAGCC+TGG | - | chr2_1:49154492-49154511 | Msa0209760:intron | 50.0% | |
| TGCTGTGGACATGTGTCATG+TGG | - | chr2_1:49154661-49154680 | Msa0209760:intron | 50.0% | |
| GGACATGTGTCATGTGGCTT+TGG | - | chr2_1:49154667-49154686 | Msa0209760:intron | 50.0% | |
| ! | GGATATGGCTGCTGGTGTTT+TGG | - | chr2_1:49154730-49154749 | Msa0209760:intron | 50.0% |
| GAATGATCGCAGGCTATCTG+TGG | - | chr2_1:49154997-49155016 | Msa0209760:intron | 50.0% | |
| TAGATGGTAGAGGAAGCTGG+TGG | - | chr2_1:49155294-49155313 | Msa0209760:intron | 50.0% | |
| AAACGGCGTGATCCATGCTA+AGG | - | chr2_1:49155377-49155396 | Msa0209760:CDS | 50.0% | |
| AAGCGGTACAATGCCTCATG+CGG | - | chr2_1:49155622-49155641 | Msa0209760:intron | 50.0% | |
| ! | GAGGAAGCTTTATCCGCATG+AGG | + | chr2_1:49155638-49155657 | None:intergenic | 50.0% |
| GAGAATTGGACCTGCAACAG+AGG | - | chr2_1:49156481-49156500 | Msa0209760:CDS | 50.0% | |
| ! | TTTTGTAGCTGCTGCGGAGG+TGG | + | chr2_1:49150710-49150729 | None:intergenic | 55.0% |
| TGAAGGCGGTAAGTGGTAGG+AGG | + | chr2_1:49150739-49150758 | None:intergenic | 55.0% | |
| ! | AGGAGGATCGCAGGTTGAAC+GGG | + | chr2_1:49150871-49150890 | None:intergenic | 55.0% |
| GCAACTTGAAGGAGGATCGC+AGG | + | chr2_1:49150880-49150899 | None:intergenic | 55.0% | |
| ACCAGTCTGAGCAGCAGTTG+TGG | + | chr2_1:49150902-49150921 | None:intergenic | 55.0% | |
| ! | ACGTGTCGTACGGGTGTCAT+AGG | + | chr2_1:49151055-49151074 | None:intergenic | 55.0% |
| GTCCTTGTCAGTGTCGTGTC+AGG | - | chr2_1:49151505-49151524 | Msa0209760:intron | 55.0% | |
| CACCTGACACGACACTGACA+AGG | + | chr2_1:49151510-49151529 | None:intergenic | 55.0% | |
| GTCGTGTCAGGTGTTCGTGT+CGG | - | chr2_1:49151517-49151536 | Msa0209760:intron | 55.0% | |
| CGACACTTACACGTCGACAC+TGG | - | chr2_1:49152261-49152280 | Msa0209760:intron | 55.0% | |
| AGTGGCTATCAGAGCCCTAC+AGG | + | chr2_1:49153050-49153069 | None:intergenic | 55.0% | |
| GTTGTGAAGTGACGTCTCGG+TGG | - | chr2_1:49153085-49153104 | Msa0209760:CDS | 55.0% | |
| GATAAAGGGACAGCGTGTGG+CGG | - | chr2_1:49153234-49153253 | Msa0209760:intron | 55.0% | |
| ATAAAGGGACAGCGTGTGGC+GGG | - | chr2_1:49153235-49153254 | Msa0209760:intron | 55.0% | |
| !! | GGTGGTGGAGCATTCTGCAA+CGG | - | chr2_1:49154286-49154305 | Msa0209760:intron | 55.0% |
| GAGCATTCTGCAACGGCCAA+AGG | - | chr2_1:49154293-49154312 | Msa0209760:intron | 55.0% | |
| GCTTAGGGTGTAAGACGGCT+TGG | - | chr2_1:49154632-49154651 | Msa0209760:intron | 55.0% | |
| AAGCCATGGGATATGGCTGC+TGG | - | chr2_1:49154722-49154741 | Msa0209760:intron | 55.0% | |
| ACACCAGCAGCCATATCCCA+TGG | + | chr2_1:49154728-49154747 | None:intergenic | 55.0% | |
| AAGCTGGTGGCACAGTCTCT+CGG | - | chr2_1:49155307-49155326 | Msa0209760:intron | 55.0% | |
| ACAGTCTCTCGGATGGATGG+CGG | - | chr2_1:49155318-49155337 | Msa0209760:intron | 55.0% | |
| ACGTCAGCTCTGTAGTCCTC+AGG | + | chr2_1:49156548-49156567 | None:intergenic | 55.0% | |
| GCCACAACTGCTGCTCAGAC+TGG | - | chr2_1:49150898-49150917 | Msa0209760:CDS | 60.0% | |
| ! | TGCTGCTCAGACTGGTGCCA+AGG | - | chr2_1:49150906-49150925 | Msa0209760:CDS | 60.0% |
| !! | GCACGGACACCTCTAGGACT+AGG | - | chr2_1:49151008-49151027 | Msa0209760:intron | 60.0% |
| !! | CTCTAGGACTAGGCGTGTCG+CGG | - | chr2_1:49151018-49151037 | Msa0209760:intron | 60.0% |
| GACACCCGTACGACACGTGT+CGG | - | chr2_1:49151057-49151076 | Msa0209760:intron | 60.0% | |
| AGGTGTCAGACACCGGTCGT+AGG | + | chr2_1:49151125-49151144 | None:intergenic | 60.0% | |
| ATGGTGTGCGGAAGCAAGGG+AGG | + | chr2_1:49151199-49151218 | None:intergenic | 60.0% | |
| GGGTATGACTGCAGTGCTCG+AGG | + | chr2_1:49153736-49153755 | None:intergenic | 60.0% | |
| TGGTGGCACAGTCTCTCGGA+TGG | - | chr2_1:49155311-49155330 | Msa0209760:intron | 60.0% | |
| GGCACAGTCTCTCGGATGGA+TGG | - | chr2_1:49155315-49155334 | Msa0209760:intron | 60.0% | |
| !! | AGGGTTGGTGCACGCTCCAC+TGG | - | chr2_1:49150844-49150863 | Msa0209760:CDS | 65.0% |
| ! | CGCAGGTTGAACGGGTCCAG+TGG | + | chr2_1:49150863-49150882 | None:intergenic | 65.0% |
| CGCGACACGCCTAGTCCTAG+AGG | + | chr2_1:49151020-49151039 | None:intergenic | 65.0% | |
| CGGTCCGACACGTGTCGTAC+GGG | + | chr2_1:49151064-49151083 | None:intergenic | 65.0% | |
| CCGGTCCGACACGTGTCGTA+CGG | + | chr2_1:49151065-49151084 | None:intergenic | 65.0% | |
| CCGTACGACACGTGTCGGAC+CGG | - | chr2_1:49151062-49151081 | Msa0209760:intron | 65.0% | |
| !! | ACGGCTTGGTGCAGCTGCTG+TGG | - | chr2_1:49154646-49154665 | Msa0209760:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 49150609 | 49156794 | 49150609 | ID=Msa0209760;Name=Msa0209760 |
| chr2_1 | mRNA | 49150609 | 49156794 | 49150609 | ID=Msa0209760-mRNA-1;Parent=Msa0209760;Name=Msa0209760-mRNA-1;_AED=0.08;_eAED=0.08;_QI=79|1|1|1|1|1|10|223|351 |
| chr2_1 | exon | 49150609 | 49150930 | 49150609 | ID=Msa0209760-mRNA-1:exon:13625;Parent=Msa0209760-mRNA-1 |
| chr2_1 | exon | 49152005 | 49152106 | 49152005 | ID=Msa0209760-mRNA-1:exon:13624;Parent=Msa0209760-mRNA-1 |
| chr2_1 | exon | 49152652 | 49152765 | 49152652 | ID=Msa0209760-mRNA-1:exon:13623;Parent=Msa0209760-mRNA-1 |
| chr2_1 | exon | 49152844 | 49152942 | 49152844 | ID=Msa0209760-mRNA-1:exon:13622;Parent=Msa0209760-mRNA-1 |
| chr2_1 | exon | 49153064 | 49153116 | 49153064 | ID=Msa0209760-mRNA-1:exon:13621;Parent=Msa0209760-mRNA-1 |
| chr2_1 | exon | 49153259 | 49153316 | 49153259 | ID=Msa0209760-mRNA-1:exon:13620;Parent=Msa0209760-mRNA-1 |
| chr2_1 | exon | 49154752 | 49154840 | 49154752 | ID=Msa0209760-mRNA-1:exon:13619;Parent=Msa0209760-mRNA-1 |
| chr2_1 | exon | 49155371 | 49155504 | 49155371 | ID=Msa0209760-mRNA-1:exon:13618;Parent=Msa0209760-mRNA-1 |
| chr2_1 | exon | 49155624 | 49155691 | 49155624 | ID=Msa0209760-mRNA-1:exon:13617;Parent=Msa0209760-mRNA-1 |
| chr2_1 | exon | 49156476 | 49156794 | 49156476 | ID=Msa0209760-mRNA-1:exon:13616;Parent=Msa0209760-mRNA-1 |
| chr2_1 | five_prime_UTR | 49156716 | 49156794 | 49156716 | ID=Msa0209760-mRNA-1:five_prime_utr;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49156476 | 49156715 | 49156476 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49155624 | 49155691 | 49155624 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49155371 | 49155504 | 49155371 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49154752 | 49154840 | 49154752 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49153259 | 49153316 | 49153259 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49153064 | 49153116 | 49153064 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49152844 | 49152942 | 49152844 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49152652 | 49152765 | 49152652 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49152005 | 49152106 | 49152005 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | CDS | 49150832 | 49150930 | 49150832 | ID=Msa0209760-mRNA-1:cds;Parent=Msa0209760-mRNA-1 |
| chr2_1 | three_prime_UTR | 49150609 | 49150831 | 49150609 | ID=Msa0209760-mRNA-1:three_prime_utr;Parent=Msa0209760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
