AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1263970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263970 MtrunA17_Chr4g0074531 97.697 521 12 0 1 521 1 521 0.0 1060
Msa1263970 MtrunA17_Chr3g0141761 68.397 443 140 0 79 521 88 530 0.0 660
Msa1263970 MtrunA17_Chr4g0035171 64.224 464 162 2 61 521 66 528 0.0 655
Msa1263970 MtrunA17_Chr7g0271011 62.815 476 166 2 57 521 61 536 0.0 631
Msa1263970 MtrunA17_Chr0c30g0494071 69.231 481 37 6 74 521 13 415 0.0 615
Msa1263970 MtrunA17_Chr5g0447341 57.882 425 172 4 99 521 96 515 1.84e-180 517
Msa1263970 MtrunA17_Chr3g0120471 53.892 501 207 9 26 521 30 511 1.51e-179 514
Msa1263970 MtrunA17_Chr3g0144741 69.531 256 77 1 82 337 80 334 2.64e-128 378
Msa1263970 MtrunA17_Chr3g0144731 62.500 160 59 1 362 521 3 161 3.93e-68 216
Msa1263970 MtrunA17_Chr0c30g0494061 92.424 66 5 0 10 75 1 66 2.17e-35 127
Msa1263970 MtrunA17_Chr4g0077071 45.946 74 39 1 354 426 2 75 7.66e-15 70.1
Msa1263970 MtrunA17_Chr6g0454161 41.860 86 42 2 400 479 92 175 2.94e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263970 AT5G19220.1 78.817 524 106 3 1 521 1 522 0.0 862
Msa1263970 AT1G27680.1 67.735 468 151 0 54 521 51 518 0.0 686
Msa1263970 AT4G39210.2 61.966 468 173 3 58 521 55 521 0.0 627
Msa1263970 AT4G39210.1 61.966 468 173 3 58 521 55 521 0.0 627
Msa1263970 AT2G21590.2 63.920 449 159 2 75 521 76 523 0.0 613
Msa1263970 AT2G21590.3 63.920 449 159 2 75 521 76 523 0.0 613
Msa1263970 AT2G21590.5 63.920 449 159 2 75 521 76 523 0.0 613
Msa1263970 AT2G21590.4 63.920 449 159 2 75 521 76 523 0.0 613
Msa1263970 AT2G21590.7 63.920 449 159 2 75 521 76 523 0.0 613
Msa1263970 AT2G21590.1 63.920 449 159 2 75 521 76 523 0.0 613
Msa1263970 AT2G21590.6 63.920 449 159 2 75 521 76 523 0.0 613
Msa1263970 AT5G48300.1 54.564 482 211 5 42 521 45 520 0.0 522
Msa1263970 AT1G05610.1 40.878 433 236 9 87 515 54 470 6.06e-110 335
Msa1263970 AT1G05610.2 40.367 436 240 9 87 515 54 476 5.16e-109 333

Find 141 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTCAAATGTTCATTTAA+AGG 0.138712 8_2:+67375909 Msa1263970:CDS
CTGGTGGATACAATTGTATT+TGG 0.249701 8_2:+67371781 Msa1263970:five_prime_UTR
AGATACTTCTTAATCTATTA+AGG 0.264868 8_2:+67374698 Msa1263970:CDS
TCCTCAAATCCGTGGTAAAA+TGG 0.265578 8_2:-67376716 None:intergenic
TTTCGGTTCCTACTTGATTT+TGG 0.266526 8_2:-67376250 None:intergenic
CTTATCTCTTCAACGATTAC+TGG 0.268611 8_2:+67375344 Msa1263970:CDS
GCTTTGAGCTCTGCTCCTTT+AGG 0.279836 8_2:-67374491 None:intergenic
TTTCTACAGGTCACCATTCC+TGG 0.296695 8_2:-67372048 None:intergenic
TCACCGGAGGAGGGACAAAA+TGG 0.309271 8_2:-67371959 None:intergenic
TTCCAATTGGAGGTGCTTAT+AGG 0.311709 8_2:+67373519 Msa1263970:CDS
TATAGCCGCGCCTCAGATTT+CGG 0.318771 8_2:+67374419 Msa1263970:intron
CCTCTACCGTATGGACTATA+TGG 0.343087 8_2:+67374117 Msa1263970:CDS
ATCACTACGCATTTGAAGAT+TGG 0.360996 8_2:-67371814 None:intergenic
ATGCTGTGCGGCAGTTTCAC+TGG 0.369035 8_2:+67373895 Msa1263970:CDS
TTTGCTCGTCGCTTAGTTAG+AGG 0.376799 8_2:-67373121 None:intergenic
GATGTTAAGATAGACAGAAT+TGG 0.383063 8_2:-67376831 None:intergenic
TCCGGTACTGGAGTCACTTT+CGG 0.387235 8_2:+67373653 Msa1263970:CDS
TTCCTAAATTAGGTTCCAAT+TGG 0.393610 8_2:+67373506 Msa1263970:intron
ATGTTAAGATAGACAGAATT+GGG 0.406966 8_2:-67376830 None:intergenic
CGTGGCGTTTGTAACAAAAC+TGG 0.411332 8_2:+67371762 Msa1263970:five_prime_UTR
TTTCCAACTGCAAATGACTT+TGG 0.412063 8_2:+67374875 Msa1263970:CDS
CGTGCTTACAACTCCGGTAC+TGG 0.418287 8_2:+67373641 Msa1263970:CDS
CACAATGGATATAAATAGAT+TGG 0.419416 8_2:+67376788 Msa1263970:three_prime_UTR
ACTCCCATCGAAGCAATATA+TGG 0.423603 8_2:-67374658 None:intergenic
TTCATAGAGCATAGTGTAGT+TGG 0.423776 8_2:+67375871 Msa1263970:CDS
CACAACCTTCAAGTTTCTAC+AGG 0.424969 8_2:-67372061 None:intergenic
GGAAGAGTTCCAATAGGAAT+AGG 0.426216 8_2:+67376219 Msa1263970:CDS
ATCCTCAATATCCTTGCTCC+TGG 0.426326 8_2:-67374071 None:intergenic
ATAACTGCCACGACTGTACT+TGG 0.437008 8_2:-67373067 None:intergenic
AGCCTATAAGCACCTCCAAT+TGG 0.440968 8_2:-67373521 None:intergenic
CTATTGATGCAGTTGCTCAT+TGG 0.441068 8_2:-67373554 None:intergenic
CAAGTGGATACAACCGTTCT+CGG 0.442588 8_2:+67374607 Msa1263970:CDS
GTTATACTTGGTGGAGGAGC+TGG 0.446891 8_2:+67373085 Msa1263970:CDS
TCACTACGCATTTGAAGATT+GGG 0.449428 8_2:-67371813 None:intergenic
CACTCTTTCTTGTCTGCCAA+TGG 0.453178 8_2:+67374281 Msa1263970:CDS
CTAAATTAGGTTCCAATTGG+AGG 0.458441 8_2:+67373509 Msa1263970:intron
GACAGAATTGGGATATAAGA+TGG 0.461311 8_2:-67376819 None:intergenic
ATGAGCAACTGCATCAATAG+TGG 0.461743 8_2:+67373557 Msa1263970:CDS
TAAAATTCTTTAGCTGAGGC+AGG 0.478517 8_2:-67374911 None:intergenic
ACCGTTCAGCTACGTGAGCC+AGG 0.478588 8_2:+67372030 Msa1263970:CDS
GGAATTAGAGTTGTTAATGA+AGG 0.480825 8_2:-67371937 None:intergenic
TTTCTCCTTGATGTGTACAT+AGG 0.483924 8_2:-67375651 None:intergenic
AAAATGGTTCAAACAAATGA+TGG 0.486066 8_2:-67376700 None:intergenic
CTGATGAAGATTGACAATAA+AGG 0.486246 8_2:+67374443 Msa1263970:CDS
ATCCTTCGAAAGACCGAGAA+CGG 0.487671 8_2:-67374620 None:intergenic
AGAAATGAGATTTGTAAAGC+TGG 0.488846 8_2:+67376954 Msa1263970:three_prime_UTR
TCATTTAGTGAAAAGCCTAA+AGG 0.496100 8_2:+67374476 Msa1263970:CDS
TTTGTCCCTCCTCCGGTGAT+CGG 0.496381 8_2:+67371963 Msa1263970:five_prime_UTR
CTTGTCTGCCAATGGATGAC+AGG 0.496401 8_2:+67374289 Msa1263970:CDS
GCAGTTTCACTGGCTCTTTG+AGG 0.499205 8_2:+67373905 Msa1263970:CDS
AACCGTTCTCGGTCTTTCGA+AGG 0.506684 8_2:+67374618 Msa1263970:CDS
CTTGCCGCAACTCAAACTCC+AGG 0.514003 8_2:+67373837 Msa1263970:CDS
GCTGAGGGAAGAGTTCCAAT+AGG 0.519229 8_2:+67376213 Msa1263970:CDS
GGTGACCTGTAGAAACTTGA+AGG 0.524038 8_2:+67372056 Msa1263970:CDS
ATACAGGACACAGTGATGCT+TGG 0.524075 8_2:+67376147 Msa1263970:intron
AAAACCATATATTGCTTCGA+TGG 0.524539 8_2:+67374654 Msa1263970:CDS
AAAATTCAACAATTGAAGAC+GGG 0.524972 8_2:+67376656 Msa1263970:CDS
TCCCAGGAGCAAGGATATTG+AGG 0.529538 8_2:+67374069 Msa1263970:CDS
ACAGTCGTGGCAGTTATACT+TGG 0.529938 8_2:+67373073 Msa1263970:CDS
GTCGTGGCAGTTATACTTGG+TGG 0.532140 8_2:+67373076 Msa1263970:CDS
ACTGGAGTCACTTTCGGAGA+TGG 0.533530 8_2:+67373659 Msa1263970:CDS
GATCCAAAGTCATTTGCAGT+TGG 0.534676 8_2:-67374878 None:intergenic
TCCGAAAGTGACTCCAGTAC+CGG 0.535857 8_2:-67373654 None:intergenic
CATGTCTCTCACTGCTGATG+TGG 0.536057 8_2:+67372176 Msa1263970:CDS
TACCATCAGATCATTCTTTG+AGG 0.536197 8_2:+67375378 Msa1263970:CDS
CCATATAGTCCATACGGTAG+AGG 0.536873 8_2:-67374117 None:intergenic
TTATCTCTTCAACGATTACT+GGG 0.537052 8_2:+67375345 Msa1263970:CDS
GAGCTTCATGCTGCTACCAA+TGG 0.540764 8_2:+67372120 Msa1263970:CDS
CACCGGAGGAGGGACAAAAT+GGG 0.542471 8_2:-67371958 None:intergenic
AACACTCTTGGTGCAACCAT+TGG 0.542518 8_2:-67372136 None:intergenic
TGCATCGTAAAAGCTAAACT+TGG 0.547364 8_2:-67375622 None:intergenic
TTGCTATTGTCAATCTTCGA+TGG 0.549202 8_2:-67375681 None:intergenic
CTATGAAACTGAGGCAGAAG+TGG 0.552867 8_2:+67376179 Msa1263970:CDS
TTGCTCGTCGCTTAGTTAGA+GGG 0.553232 8_2:-67373120 None:intergenic
TCCTCAATATCCTTGCTCCT+GGG 0.553261 8_2:-67374070 None:intergenic
CAAAGTCCATATAGTCCATA+CGG 0.554961 8_2:-67374123 None:intergenic
AAACCATATATTGCTTCGAT+GGG 0.560652 8_2:+67374655 Msa1263970:CDS
AAATGGTTCAAACAAATGAT+GGG 0.563185 8_2:-67376699 None:intergenic
TGGGGATCACCTCTACCGTA+TGG 0.564627 8_2:+67374108 Msa1263970:CDS
GTTGCACCAAGAGTGTTACT+AGG 0.567304 8_2:+67372142 Msa1263970:CDS
CATGTAAAATTCTTTAGCTG+AGG 0.568397 8_2:-67374915 None:intergenic
GCAACCTACCTGTCATCCAT+TGG 0.568958 8_2:-67374297 None:intergenic
AATCAATGTCCTACACATGA+AGG 0.570702 8_2:-67371888 None:intergenic
TCGTAAAAGCTAAACTTGGA+TGG 0.571340 8_2:-67375618 None:intergenic
TTCCCCTGGAGTTTGAGTTG+CGG 0.572220 8_2:-67373841 None:intergenic
AACTACACTATGCTCTATGA+AGG 0.573836 8_2:-67375869 None:intergenic
AAAATGGCAGTCTCTGCCAT+TGG 0.577683 8_2:+67371988 Msa1263970:exon
CTTAGTTAGAGGGAAGAGAC+GGG 0.579833 8_2:-67373110 None:intergenic
AACGATTACTGGGAGGACAT+AGG 0.581490 8_2:+67375355 Msa1263970:CDS
TGCAAATGACTTTGGATCAG+AGG 0.582266 8_2:+67374883 Msa1263970:CDS
TGCCTCAAAGAATGATCTGA+TGG 0.583837 8_2:-67375380 None:intergenic
CAAAACCTATGTACACATCA+AGG 0.586204 8_2:+67375646 Msa1263970:CDS
TTACAAACGCCACGAAGTAG+AGG 0.586616 8_2:-67371753 None:intergenic
ATTGCACGTGCTTACAACTC+CGG 0.586744 8_2:+67373635 Msa1263970:CDS
ATACAACAGTGACGCCGGAA+CGG 0.588438 8_2:-67376630 None:intergenic
TGATGTGGCTAGCGAATCCA+AGG 0.589531 8_2:+67372191 Msa1263970:CDS
AGTGGCAGCACAGTTAGCTG+AGG 0.590518 8_2:+67376197 Msa1263970:CDS
ACAAACGCCACGAAGTAGAG+GGG 0.592655 8_2:-67371751 None:intergenic
GGCGTTTGTAACAAAACTGG+TGG 0.597919 8_2:+67371765 Msa1263970:five_prime_UTR
ACTCAAACTCCAGGGGAACA+AGG 0.598679 8_2:+67373846 Msa1263970:CDS
TCCTGGCTCACGTAGCTGAA+CGG 0.602124 8_2:-67372031 None:intergenic
TGATAGCATTATCTGACCAA+TGG 0.603744 8_2:-67372004 None:intergenic
TTTCAATACAACAGTGACGC+CGG 0.605108 8_2:-67376635 None:intergenic
GTGGCAGTTATACTTGGTGG+AGG 0.608267 8_2:+67373079 Msa1263970:CDS
TCAGCTACGTGAGCCAGGAA+TGG 0.608992 8_2:+67372035 Msa1263970:CDS
GTTGATTCAATTATATCACA+TGG 0.609797 8_2:+67375829 Msa1263970:CDS
GCTTAGTTAGAGGGAAGAGA+CGG 0.611428 8_2:-67373111 None:intergenic
TTGCCGCAACTCAAACTCCA+GGG 0.611763 8_2:+67373838 Msa1263970:CDS
GGGAGTGTACGTCTTCAAGA+AGG 0.612483 8_2:+67374675 Msa1263970:CDS
GAGGCTGATAGATCATCAGA+AGG 0.613138 8_2:+67376598 Msa1263970:CDS
ACTACACAACCTTCATGTGT+AGG 0.614291 8_2:+67371879 Msa1263970:five_prime_UTR
GAAGTAGGATCCCAGGAGCA+AGG 0.614406 8_2:+67374060 Msa1263970:intron
TGAAGATTGACAATAAAGGA+AGG 0.616266 8_2:+67374447 Msa1263970:CDS
TTAACTGCAGGGAGTACAAG+AGG 0.616616 8_2:+67376579 Msa1263970:intron
TACAAACGCCACGAAGTAGA+GGG 0.619232 8_2:-67371752 None:intergenic
TGAGCAACTGCATCAATAGT+GGG 0.619602 8_2:+67373558 Msa1263970:CDS
AGGAGCAGAGCTCAAAGCAA+TGG 0.621977 8_2:+67374496 Msa1263970:CDS
TGAATTGCAATCTCTCTGCA+CGG 0.623735 8_2:+67376919 Msa1263970:three_prime_UTR
GTGGCAGCACAGTTAGCTGA+GGG 0.623997 8_2:+67376198 Msa1263970:CDS
TGCAATATGTCTGTTGAGTG+AGG 0.624023 8_2:-67373618 None:intergenic
GATACTCACATGCTCAGTGA+GGG 0.627354 8_2:-67375410 None:intergenic
CTATTGTCAATCTTCGATGG+TGG 0.633694 8_2:-67375678 None:intergenic
ATCCAGGATCATCGAGAGAG+CGG 0.634167 8_2:+67374249 Msa1263970:intron
CTTCATCAGACCGAAATCTG+AGG 0.635986 8_2:-67374429 None:intergenic
ATCGAAGATTGACAATAGCA+AGG 0.647211 8_2:+67375683 Msa1263970:CDS
AAGGGATCCAAGTACAGTCG+TGG 0.648334 8_2:+67373060 Msa1263970:CDS
TAGGACATTGATTTCAAACA+CGG 0.648351 8_2:+67371898 Msa1263970:five_prime_UTR
AAAGCTCGTCCTCAAATCCG+TGG 0.659004 8_2:-67376724 None:intergenic
CACATCAGCAGTGAGAGACA+TGG 0.659597 8_2:-67372175 None:intergenic
TGCCGCAACTCAAACTCCAG+GGG 0.664124 8_2:+67373839 Msa1263970:CDS
ACAATTGTATTTGGATAACG+TGG 0.668904 8_2:+67371790 Msa1263970:five_prime_UTR
AGCTGATTACTATGAAACTG+AGG 0.673409 8_2:+67376170 Msa1263970:CDS
AGGCTGATAGATCATCAGAA+GGG 0.673829 8_2:+67376599 Msa1263970:CDS
TTTCGGAGATGGCTATGTCG+AGG 0.674748 8_2:+67373670 Msa1263970:CDS
TCAGACCGAAATCTGAGGCG+CGG 0.680822 8_2:-67374424 None:intergenic
TGATACTCACATGCTCAGTG+AGG 0.683087 8_2:-67375411 None:intergenic
CAAACGCCACGAAGTAGAGG+GGG 0.704127 8_2:-67371750 None:intergenic
TCTCTTCAACGATTACTGGG+AGG 0.713335 8_2:+67375348 Msa1263970:CDS
AAACACGGACAAGAAGACAA+AGG 0.716788 8_2:+67371913 Msa1263970:five_prime_UTR
TGTTGTCATAGCAAACTCAG+AGG 0.724048 8_2:+67376380 Msa1263970:CDS
AAGGTACTGCTGATGCTGTG+CGG 0.750182 8_2:+67373883 Msa1263970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATAAAAACACAA+TGG + chr8_2:67376773-67376792 Msa1263970:three_prime_UTR 10.0%
!! GAATTTAAATAACAATTCAT+TGG - chr8_2:67372465-67372484 None:intergenic 15.0%
!!! ACCAATTAATTTAATTTAGA+TGG + chr8_2:67374849-67374868 Msa1263970:intron 15.0%
!! TAAATTCCTAAAATGATTTA+AGG + chr8_2:67375160-67375179 Msa1263970:intron 15.0%
!! ATATTTAAATCTCAAAATCA+TGG - chr8_2:67375562-67375581 None:intergenic 15.0%
!!! ATCATTTTTTTTGTTGGAAT+TGG - chr8_2:67371704-67371723 None:intergenic 20.0%
!! TTCCAACAAAAAAAATGATA+AGG + chr8_2:67371705-67371724 Msa1263970:intron 20.0%
!!! AGAAATCTTATGTTTTTCTT+TGG - chr8_2:67372440-67372459 None:intergenic 20.0%
!!! TTTGATTCTCTACTTTTATT+TGG + chr8_2:67372493-67372512 Msa1263970:intron 20.0%
!! ATGGATTTACAATTATATAG+TGG + chr8_2:67372530-67372549 Msa1263970:intron 20.0%
!! TAAACAAAACTCTTAATCAA+TGG - chr8_2:67372780-67372799 None:intergenic 20.0%
!! TATATTACTGCATTGAATTT+AGG - chr8_2:67372927-67372946 None:intergenic 20.0%
!! TAAATTCAATGCAGTAATAT+AGG + chr8_2:67372926-67372945 Msa1263970:intron 20.0%
!! AAATTCAATGCAGTAATATA+GGG + chr8_2:67372927-67372946 Msa1263970:intron 20.0%
!! AGATACTTCTTAATCTATTA+AGG + chr8_2:67374698-67374717 Msa1263970:CDS 20.0%
!! TAATGTTGTATCAAAATGTT+AGG + chr8_2:67374727-67374746 Msa1263970:intron 20.0%
!! GCCATCTAAATTAAATTAAT+TGG - chr8_2:67374853-67374872 None:intergenic 20.0%
!!! TTTTCACCTTAAATCATTTT+AGG - chr8_2:67375169-67375188 None:intergenic 20.0%
!! TGAAGTTTAATTCATTTCTT+AGG - chr8_2:67375461-67375480 None:intergenic 20.0%
!! AAACTCAAATGTTCATTTAA+AGG + chr8_2:67375909-67375928 Msa1263970:CDS 20.0%
!!! ATCTTTTGAAAATAGTAGAT+TGG - chr8_2:67375945-67375964 None:intergenic 20.0%
!! AATAAACATACCAAAATACA+TGG - chr8_2:67376104-67376123 None:intergenic 20.0%
!! AAAAATTCAACAATTGAAGA+CGG + chr8_2:67376655-67376674 Msa1263970:CDS 20.0%
! TTAACTTATCGAATATCCTA+TGG - chr8_2:67371672-67371691 None:intergenic 25.0%
!!! GTCCTTATCATTTTTTTTGT+TGG - chr8_2:67371710-67371729 None:intergenic 25.0%
!!! TTTTGTAATGGAGAAATGAT+GGG + chr8_2:67372087-67372106 Msa1263970:CDS 25.0%
! CAAGAAAAAGTTAATTGCAT+TGG - chr8_2:67372254-67372273 None:intergenic 25.0%
!!! GCAATTAACTTTTTCTTGTT+TGG + chr8_2:67372256-67372275 Msa1263970:intron 25.0%
! TACCATGACTATATATGTAT+AGG + chr8_2:67372556-67372575 Msa1263970:intron 25.0%
! TACCTATACATATATAGTCA+TGG - chr8_2:67372561-67372580 None:intergenic 25.0%
!! ACTTTTTGTTAGATTAAAGC+TGG + chr8_2:67372607-67372626 Msa1263970:intron 25.0%
!! TTACTACACGTAAATTTTGA+AGG + chr8_2:67372814-67372833 Msa1263970:intron 25.0%
! AAATGTTTCCATATGATGAA+TGG + chr8_2:67372996-67373015 Msa1263970:intron 25.0%
! AATGTTTCCATATGATGAAT+GGG + chr8_2:67372997-67373016 Msa1263970:intron 25.0%
! TTATGATGAATGGAACAATT+AGG - chr8_2:67373188-67373207 None:intergenic 25.0%
! AAGGAAATGAAAAACGTAAA+TGG + chr8_2:67373398-67373417 Msa1263970:intron 25.0%
!!! ATTAAGTTGGTTATCTTCTT+TGG + chr8_2:67373480-67373499 Msa1263970:intron 25.0%
!!! TTAAGTTGGTTATCTTCTTT+GGG + chr8_2:67373481-67373500 Msa1263970:intron 25.0%
! ATAATTTACAAATCAACGTG+CGG - chr8_2:67373783-67373802 None:intergenic 25.0%
!! AAGCTACAACATATATTTTG+TGG - chr8_2:67373960-67373979 None:intergenic 25.0%
!! AAATATGCTTTTCATGAAGT+AGG + chr8_2:67374045-67374064 Msa1263970:intron 25.0%
!! AAAATGTTAGGTTTTTCTTG+TGG + chr8_2:67374739-67374758 Msa1263970:intron 25.0%
!! AGCTAAAGAATTTTACATGA+AGG + chr8_2:67374919-67374938 Msa1263970:CDS 25.0%
!! TTAAGACTTTTGTCTAAGTT+AGG - chr8_2:67375106-67375125 None:intergenic 25.0%
! TAAAAACTTATAGCTGCTTA+TGG + chr8_2:67375123-67375142 Msa1263970:intron 25.0%
! ATGTTCACTTTCACTTATTA+TGG + chr8_2:67375292-67375311 Msa1263970:intron 25.0%
! TCAATTTCAGTTGTAATTGA+TGG + chr8_2:67375431-67375450 Msa1263970:intron 25.0%
! AAAGGTCACATAATATATTG+AGG - chr8_2:67375797-67375816 None:intergenic 25.0%
!! GTTGATTCAATTATATCACA+TGG + chr8_2:67375829-67375848 Msa1263970:CDS 25.0%
! CAAATGTTCATTTAAAGGTT+TGG + chr8_2:67375914-67375933 Msa1263970:intron 25.0%
! GTAAATCAGGTAAGTATATA+TGG - chr8_2:67375994-67376013 None:intergenic 25.0%
!! AATATTCCTAAAGTTTTTGC+TGG + chr8_2:67376046-67376065 Msa1263970:intron 25.0%
! ATTGTATTACACTTCTATAC+AGG + chr8_2:67376131-67376150 Msa1263970:intron 25.0%
! ATTGACAAAAATGCTAGAAT+TGG + chr8_2:67376351-67376370 Msa1263970:CDS 25.0%
! AAAATTCAACAATTGAAGAC+GGG + chr8_2:67376656-67376675 Msa1263970:CDS 25.0%
! AAATGGTTCAAACAAATGAT+GGG - chr8_2:67376702-67376721 None:intergenic 25.0%
! AAAATGGTTCAAACAAATGA+TGG - chr8_2:67376703-67376722 None:intergenic 25.0%
! CACAATGGATATAAATAGAT+TGG + chr8_2:67376788-67376807 Msa1263970:three_prime_UTR 25.0%
! ATGTTAAGATAGACAGAATT+GGG - chr8_2:67376833-67376852 None:intergenic 25.0%
ATATCCTATGGATTTAGACT+TGG - chr8_2:67371660-67371679 None:intergenic 30.0%
ACAATTGTATTTGGATAACG+TGG + chr8_2:67371790-67371809 Msa1263970:five_prime_UTR 30.0%
!! TAGGACATTGATTTCAAACA+CGG + chr8_2:67371898-67371917 Msa1263970:five_prime_UTR 30.0%
GGAATTAGAGTTGTTAATGA+AGG - chr8_2:67371940-67371959 None:intergenic 30.0%
!! AAGGTTGTGAAGTTTTGTAA+TGG + chr8_2:67372075-67372094 Msa1263970:CDS 30.0%
!! GTTTTGTAATGGAGAAATGA+TGG + chr8_2:67372086-67372105 Msa1263970:CDS 30.0%
! ATTTTTCCTAGTAACACTCT+TGG - chr8_2:67372151-67372170 None:intergenic 30.0%
TAGAAACGTTGTGAAATTCT+TGG + chr8_2:67372366-67372385 Msa1263970:intron 30.0%
!!! TTTGGCTTGTATTTTGACTA+TGG + chr8_2:67372511-67372530 Msa1263970:intron 30.0%
TTGTGACCTATATACTTCAA+TGG + chr8_2:67372638-67372657 Msa1263970:intron 30.0%
CAAAGAAAATCTTAATGGAG+GGG - chr8_2:67372692-67372711 None:intergenic 30.0%
GCAAAGAAAATCTTAATGGA+GGG - chr8_2:67372693-67372712 None:intergenic 30.0%
AGCAAAGAAAATCTTAATGG+AGG - chr8_2:67372694-67372713 None:intergenic 30.0%
TGCACAAAGTATAAAGTTGT+TGG - chr8_2:67372755-67372774 None:intergenic 30.0%
ATTACTGCATTGAATTTAGG+TGG - chr8_2:67372924-67372943 None:intergenic 30.0%
CATATGATGAATGGGAATAT+GGG + chr8_2:67373005-67373024 Msa1263970:intron 30.0%
AAAATGCAGATGTGGAAAAA+AGG + chr8_2:67373041-67373060 Msa1263970:CDS 30.0%
AAATGCAGATGTGGAAAAAA+GGG + chr8_2:67373042-67373061 Msa1263970:CDS 30.0%
AGAAAAGAAAAACTTACAGC+AGG - chr8_2:67373148-67373167 None:intergenic 30.0%
GAATGGAACAATTAGGAAAA+TGG - chr8_2:67373181-67373200 None:intergenic 30.0%
GTTTGTGTTAGTGTTTCATA+GGG - chr8_2:67373235-67373254 None:intergenic 30.0%
TGTTTGTGTTAGTGTTTCAT+AGG - chr8_2:67373236-67373255 None:intergenic 30.0%
TTGAATGTAACAATAAGTGC+CGG + chr8_2:67373305-67373324 Msa1263970:intron 30.0%
ATATGTAGCTGCTTACATTA+TGG - chr8_2:67373462-67373481 None:intergenic 30.0%
TAAGCAGCTACATATTAAGT+TGG + chr8_2:67373467-67373486 Msa1263970:intron 30.0%
!! TAAGTTGGTTATCTTCTTTG+GGG + chr8_2:67373482-67373501 Msa1263970:intron 30.0%
TTCCTAAATTAGGTTCCAAT+TGG + chr8_2:67373506-67373525 Msa1263970:intron 30.0%
! GTGGTTTTCTTAATTGCTTT+AGG - chr8_2:67373941-67373960 None:intergenic 30.0%
!! TGTAGCTTTTTCTTTAATGC+AGG + chr8_2:67373972-67373991 Msa1263970:intron 30.0%
! GGTTATGCTGTTTAATACTA+TGG + chr8_2:67373993-67374012 Msa1263970:intron 30.0%
CATCACACTTAATTGCTTAT+TGG - chr8_2:67374020-67374039 None:intergenic 30.0%
!!! AGGATGTTTTGATTCTTTCT+GGG + chr8_2:67374089-67374108 Msa1263970:CDS 30.0%
ATATGGACTTTGTTAGAGTA+AGG + chr8_2:67374134-67374153 Msa1263970:intron 30.0%
TTGACTTAAACTTCTTATCC+AGG + chr8_2:67374233-67374252 Msa1263970:intron 30.0%
TGACATGAATCTTACTACTT+GGG - chr8_2:67374327-67374346 None:intergenic 30.0%
ATGACATGAATCTTACTACT+TGG - chr8_2:67374328-67374347 None:intergenic 30.0%
CTGATGAAGATTGACAATAA+AGG + chr8_2:67374443-67374462 Msa1263970:CDS 30.0%
TGAAGATTGACAATAAAGGA+AGG + chr8_2:67374447-67374466 Msa1263970:CDS 30.0%
! TAGGCTTTTCACTAAATGAA+AGG - chr8_2:67374475-67374494 None:intergenic 30.0%
TCATTTAGTGAAAAGCCTAA+AGG + chr8_2:67374476-67374495 Msa1263970:CDS 30.0%
AAAACCATATATTGCTTCGA+TGG + chr8_2:67374654-67374673 Msa1263970:CDS 30.0%
AAACCATATATTGCTTCGAT+GGG + chr8_2:67374655-67374674 Msa1263970:CDS 30.0%
CATGTAAAATTCTTTAGCTG+AGG - chr8_2:67374918-67374937 None:intergenic 30.0%
ATCATTCTTTGTCATTGCAA+TGG + chr8_2:67375012-67375031 Msa1263970:intron 30.0%
CTGAACTTGTAATTGCTTAT+TGG + chr8_2:67375237-67375256 Msa1263970:intron 30.0%
TATAGCAAAAGTTTGAATGC+AGG + chr8_2:67375321-67375340 Msa1263970:intron 30.0%
TTATCTCTTCAACGATTACT+GGG + chr8_2:67375345-67375364 Msa1263970:CDS 30.0%
AAAGTTGTAATCACATGGTA+TGG - chr8_2:67375756-67375775 None:intergenic 30.0%
TATTGAGGTTGAACATTTGA+TGG - chr8_2:67375782-67375801 None:intergenic 30.0%
TACCTGATTTACTAGTTATG+TGG + chr8_2:67376002-67376021 Msa1263970:intron 30.0%
! TAGTAGTAGACCATGTATTT+TGG + chr8_2:67376091-67376110 Msa1263970:intron 30.0%
AGAAAACACCAAAATCAAGT+AGG + chr8_2:67376242-67376261 Msa1263970:intron 30.0%
! TACCATGATAGTGAAAGTTT+CGG - chr8_2:67376270-67376289 None:intergenic 30.0%
AGTAAGCTAAAGCAACTTAA+GGG - chr8_2:67376449-67376468 None:intergenic 30.0%
TGCTAATTGAATTAACTGCA+GGG + chr8_2:67376568-67376587 Msa1263970:intron 30.0%
! TTGTTTGAACCATTTTACCA+CGG + chr8_2:67376707-67376726 Msa1263970:three_prime_UTR 30.0%
GATGTTAAGATAGACAGAAT+TGG - chr8_2:67376834-67376853 None:intergenic 30.0%
! CTGGTGGATACAATTGTATT+TGG + chr8_2:67371781-67371800 Msa1263970:five_prime_UTR 35.0%
TCACTACGCATTTGAAGATT+GGG - chr8_2:67371816-67371835 None:intergenic 35.0%
ATCACTACGCATTTGAAGAT+TGG - chr8_2:67371817-67371836 None:intergenic 35.0%
AATCAATGTCCTACACATGA+AGG - chr8_2:67371891-67371910 None:intergenic 35.0%
TGATAGCATTATCTGACCAA+TGG - chr8_2:67372007-67372026 None:intergenic 35.0%
AAGTTCACTCAGATAAACCT+TGG - chr8_2:67372211-67372230 None:intergenic 35.0%
TGACCTATATACTTCAATGG+TGG + chr8_2:67372641-67372660 Msa1263970:intron 35.0%
GACCTATATACTTCAATGGT+GGG + chr8_2:67372642-67372661 Msa1263970:intron 35.0%
AACCCACCATTGAAGTATAT+AGG - chr8_2:67372647-67372666 None:intergenic 35.0%
GGGAGCAAAGAAAATCTTAA+TGG - chr8_2:67372697-67372716 None:intergenic 35.0%
CCATATTCCCATTCATCATA+TGG - chr8_2:67373007-67373026 None:intergenic 35.0%
CCATATGATGAATGGGAATA+TGG + chr8_2:67373004-67373023 Msa1263970:intron 35.0%
TCCATTCATCATAAGCATAG+TGG + chr8_2:67373194-67373213 Msa1263970:intron 35.0%
ACCACTATGCTTATGATGAA+TGG - chr8_2:67373198-67373217 None:intergenic 35.0%
CATAGTGGTTGCTTATAGTT+TGG + chr8_2:67373209-67373228 Msa1263970:intron 35.0%
TAGTGTTTGGTTAGTAACAC+CGG - chr8_2:67373327-67373346 None:intergenic 35.0%
GTATCAGTGCTACATAAGTT+TGG + chr8_2:67373365-67373384 Msa1263970:intron 35.0%
! CGTTTTTCATTTCCTTGACA+GGG - chr8_2:67373394-67373413 None:intergenic 35.0%
! ACGTTTTTCATTTCCTTGAC+AGG - chr8_2:67373395-67373414 None:intergenic 35.0%
!! TCTTTGGGGTTTCCTAAATT+AGG + chr8_2:67373496-67373515 Msa1263970:intron 35.0%
CTCCAATTGGAACCTAATTT+AGG - chr8_2:67373511-67373530 None:intergenic 35.0%
CTAAATTAGGTTCCAATTGG+AGG + chr8_2:67373509-67373528 Msa1263970:intron 35.0%
CAAGGTAAAAAGTGGTTTCA+AGG + chr8_2:67373864-67373883 Msa1263970:CDS 35.0%
!!! GAGGATGTTTTGATTCTTTC+TGG + chr8_2:67374088-67374107 Msa1263970:CDS 35.0%
!!! GGATGTTTTGATTCTTTCTG+GGG + chr8_2:67374090-67374109 Msa1263970:CDS 35.0%
CAAAGTCCATATAGTCCATA+CGG - chr8_2:67374126-67374145 None:intergenic 35.0%
ACATGAATCTTACTACTTGG+GGG - chr8_2:67374325-67374344 None:intergenic 35.0%
GACATGAATCTTACTACTTG+GGG - chr8_2:67374326-67374345 None:intergenic 35.0%
TTTCCAACTGCAAATGACTT+TGG + chr8_2:67374875-67374894 Msa1263970:CDS 35.0%
TAAAATTCTTTAGCTGAGGC+AGG - chr8_2:67374914-67374933 None:intergenic 35.0%
! GAAGGTATGACTGATAAAGA+AGG + chr8_2:67374937-67374956 Msa1263970:intron 35.0%
CTGATAAAGAAGGTTTACTG+TGG + chr8_2:67374947-67374966 Msa1263970:intron 35.0%
CTTATCTCTTCAACGATTAC+TGG + chr8_2:67375344-67375363 Msa1263970:CDS 35.0%
TACCATCAGATCATTCTTTG+AGG + chr8_2:67375378-67375397 Msa1263970:CDS 35.0%
TCGTAAAAGCTAAACTTGGA+TGG - chr8_2:67375621-67375640 None:intergenic 35.0%
TGCATCGTAAAAGCTAAACT+TGG - chr8_2:67375625-67375644 None:intergenic 35.0%
CAAAACCTATGTACACATCA+AGG + chr8_2:67375646-67375665 Msa1263970:CDS 35.0%
TTTCTCCTTGATGTGTACAT+AGG - chr8_2:67375654-67375673 None:intergenic 35.0%
! TTGCTATTGTCAATCTTCGA+TGG - chr8_2:67375684-67375703 None:intergenic 35.0%
ATCGAAGATTGACAATAGCA+AGG + chr8_2:67375683-67375702 Msa1263970:CDS 35.0%
AACTACACTATGCTCTATGA+AGG - chr8_2:67375872-67375891 None:intergenic 35.0%
TTCATAGAGCATAGTGTAGT+TGG + chr8_2:67375871-67375890 Msa1263970:CDS 35.0%
TGCCACATAACTAGTAAATC+AGG - chr8_2:67376007-67376026 None:intergenic 35.0%
TGTGGCAAGTCTCAATTTAT+AGG + chr8_2:67376020-67376039 Msa1263970:intron 35.0%
! ATTCCTAAAGTTTTTGCTGG+TGG + chr8_2:67376049-67376068 Msa1263970:intron 35.0%
TTTCCACCAGCAAAAACTTT+AGG - chr8_2:67376055-67376074 None:intergenic 35.0%
AGCTGATTACTATGAAACTG+AGG + chr8_2:67376170-67376189 Msa1263970:CDS 35.0%
! GTGTTTTCTCCTATTCCTAT+TGG - chr8_2:67376231-67376250 None:intergenic 35.0%
! TTTCGGTTCCTACTTGATTT+TGG - chr8_2:67376253-67376272 None:intergenic 35.0%
AACCGAAACTTTCACTATCA+TGG + chr8_2:67376265-67376284 Msa1263970:intron 35.0%
GAGTAAGCTAAAGCAACTTA+AGG - chr8_2:67376450-67376469 None:intergenic 35.0%
GTGCTAATTGAATTAACTGC+AGG + chr8_2:67376567-67376586 Msa1263970:intron 35.0%
GACAGAATTGGGATATAAGA+TGG - chr8_2:67376822-67376841 None:intergenic 35.0%
AGAGCCAAGTCTAAATCCAT+AGG + chr8_2:67371653-67371672 Msa1263970:intron 40.0%
ACTACACAACCTTCATGTGT+AGG + chr8_2:67371879-67371898 Msa1263970:five_prime_UTR 40.0%
AAACACGGACAAGAAGACAA+AGG + chr8_2:67371913-67371932 Msa1263970:five_prime_UTR 40.0%
! CACAACCTTCAAGTTTCTAC+AGG - chr8_2:67372064-67372083 None:intergenic 40.0%
!! TACTTCAATGGTGGGTTACT+TGG + chr8_2:67372650-67372669 Msa1263970:intron 40.0%
!! ACTTCAATGGTGGGTTACTT+GGG + chr8_2:67372651-67372670 Msa1263970:intron 40.0%
ATTCCCATGCACACTGAAAT+GGG - chr8_2:67372717-67372736 None:intergenic 40.0%
TGCATTGAATTTAGGTGGCT+TGG - chr8_2:67372919-67372938 None:intergenic 40.0%
GCAGTTGAAAAATGCAGATG+TGG + chr8_2:67373033-67373052 Msa1263970:intron 40.0%
TGACGCTAACACGTAGATAT+TGG + chr8_2:67373262-67373281 Msa1263970:intron 40.0%
! ATTGAAAGCGTGCTAGTGTT+TGG - chr8_2:67373340-67373359 None:intergenic 40.0%
!! TTCCAATTGGAGGTGCTTAT+AGG + chr8_2:67373519-67373538 Msa1263970:CDS 40.0%
CTATTGATGCAGTTGCTCAT+TGG - chr8_2:67373557-67373576 None:intergenic 40.0%
ATGAGCAACTGCATCAATAG+TGG + chr8_2:67373557-67373576 Msa1263970:CDS 40.0%
TGAGCAACTGCATCAATAGT+GGG + chr8_2:67373558-67373577 Msa1263970:CDS 40.0%
TGCAATATGTCTGTTGAGTG+AGG - chr8_2:67373621-67373640 None:intergenic 40.0%
! ACACACACATAAGCTGACTT+AGG - chr8_2:67373741-67373760 None:intergenic 40.0%
AAGTGTGCTTGTTCTGTTTC+AGG + chr8_2:67373812-67373831 Msa1263970:intron 40.0%
! TTTTCATGAAGTAGGATCCC+AGG + chr8_2:67374053-67374072 Msa1263970:intron 40.0%
CTGCTTCATGATTTAGCAAG+TGG + chr8_2:67374591-67374610 Msa1263970:intron 40.0%
ACTCCCATCGAAGCAATATA+TGG - chr8_2:67374661-67374680 None:intergenic 40.0%
GATCCAAAGTCATTTGCAGT+TGG - chr8_2:67374881-67374900 None:intergenic 40.0%
TGCAAATGACTTTGGATCAG+AGG + chr8_2:67374883-67374902 Msa1263970:CDS 40.0%
GATGCATACTGTCACAACAT+AGG - chr8_2:67374995-67375014 None:intergenic 40.0%
AGTGAAAGTGAACATTCTGC+TGG - chr8_2:67375287-67375306 None:intergenic 40.0%
TGCCTCAAAGAATGATCTGA+TGG - chr8_2:67375383-67375402 None:intergenic 40.0%
CTATTGTCAATCTTCGATGG+TGG - chr8_2:67375681-67375700 None:intergenic 40.0%
ATGGAGAGTAGGGATACAAA+GGG - chr8_2:67375737-67375756 None:intergenic 40.0%
TATGGAGAGTAGGGATACAA+AGG - chr8_2:67375738-67375757 None:intergenic 40.0%
ATCACATGGTATGGAGAGTA+GGG - chr8_2:67375747-67375766 None:intergenic 40.0%
AATCACATGGTATGGAGAGT+AGG - chr8_2:67375748-67375767 None:intergenic 40.0%
GGCAGAAAGTTGTAATCACA+TGG - chr8_2:67375761-67375780 None:intergenic 40.0%
ATCAACGAGCTGCATAAGAA+AGG - chr8_2:67375815-67375834 None:intergenic 40.0%
GGAAGAGTTCCAATAGGAAT+AGG + chr8_2:67376219-67376238 Msa1263970:CDS 40.0%
TGTTGTCATAGCAAACTCAG+AGG + chr8_2:67376380-67376399 Msa1263970:CDS 40.0%
AAGCTAAAGCAACTTAAGGG+TGG - chr8_2:67376446-67376465 None:intergenic 40.0%
AGGCTGATAGATCATCAGAA+GGG + chr8_2:67376599-67376618 Msa1263970:CDS 40.0%
TTTCAATACAACAGTGACGC+CGG - chr8_2:67376638-67376657 None:intergenic 40.0%
! ACCATTTTACCACGGATTTG+AGG + chr8_2:67376715-67376734 Msa1263970:three_prime_UTR 40.0%
TCCTCAAATCCGTGGTAAAA+TGG - chr8_2:67376719-67376738 None:intergenic 40.0%
TGAATTGCAATCTCTCTGCA+CGG + chr8_2:67376919-67376938 Msa1263970:three_prime_UTR 40.0%
TACAAACGCCACGAAGTAGA+GGG - chr8_2:67371755-67371774 None:intergenic 45.0%
TTACAAACGCCACGAAGTAG+AGG - chr8_2:67371756-67371775 None:intergenic 45.0%
CGTGGCGTTTGTAACAAAAC+TGG + chr8_2:67371762-67371781 Msa1263970:five_prime_UTR 45.0%
GGCGTTTGTAACAAAACTGG+TGG + chr8_2:67371765-67371784 Msa1263970:five_prime_UTR 45.0%
!!! CTGCCATTTTTTCCGATCAC+CGG - chr8_2:67371978-67371997 None:intergenic 45.0%
AAAATGGCAGTCTCTGCCAT+TGG + chr8_2:67371988-67372007 Msa1263970:exon 45.0%
TTTCTACAGGTCACCATTCC+TGG - chr8_2:67372051-67372070 None:intergenic 45.0%
GGTGACCTGTAGAAACTTGA+AGG + chr8_2:67372056-67372075 Msa1263970:CDS 45.0%
! AACACTCTTGGTGCAACCAT+TGG - chr8_2:67372139-67372158 None:intergenic 45.0%
!! GTTGCACCAAGAGTGTTACT+AGG + chr8_2:67372142-67372161 Msa1263970:CDS 45.0%
TACTTGGGTCCACTGTATCA+AGG + chr8_2:67372666-67372685 Msa1263970:intron 45.0%
CATTCCCATGCACACTGAAA+TGG - chr8_2:67372718-67372737 None:intergenic 45.0%
CATTTCAGTGTGCATGGGAA+TGG + chr8_2:67372716-67372735 Msa1263970:intron 45.0%
ATAACTGCCACGACTGTACT+TGG - chr8_2:67373070-67373089 None:intergenic 45.0%
ACAGTCGTGGCAGTTATACT+TGG + chr8_2:67373073-67373092 Msa1263970:CDS 45.0%
CTTAGTTAGAGGGAAGAGAC+GGG - chr8_2:67373113-67373132 None:intergenic 45.0%
GCTTAGTTAGAGGGAAGAGA+CGG - chr8_2:67373114-67373133 None:intergenic 45.0%
TTGCTCGTCGCTTAGTTAGA+GGG - chr8_2:67373123-67373142 None:intergenic 45.0%
TTTGCTCGTCGCTTAGTTAG+AGG - chr8_2:67373124-67373143 None:intergenic 45.0%
TAAGTTTGGTCACCCTGTCA+AGG + chr8_2:67373379-67373398 Msa1263970:intron 45.0%
AGCCTATAAGCACCTCCAAT+TGG - chr8_2:67373524-67373543 None:intergenic 45.0%
ATTGCACGTGCTTACAACTC+CGG + chr8_2:67373635-67373654 Msa1263970:CDS 45.0%
!! CACTTTTTACCTTGTTCCCC+TGG - chr8_2:67373858-67373877 None:intergenic 45.0%
CAGGGGAACAAGGTAAAAAG+TGG + chr8_2:67373856-67373875 Msa1263970:CDS 45.0%
TCCTCAATATCCTTGCTCCT+GGG - chr8_2:67374073-67374092 None:intergenic 45.0%
ATCCTCAATATCCTTGCTCC+TGG - chr8_2:67374074-67374093 None:intergenic 45.0%
CCATATAGTCCATACGGTAG+AGG - chr8_2:67374120-67374139 None:intergenic 45.0%
! CCTCTACCGTATGGACTATA+TGG + chr8_2:67374117-67374136 Msa1263970:CDS 45.0%
CACTCTTTCTTGTCTGCCAA+TGG + chr8_2:67374281-67374300 Msa1263970:CDS 45.0%
CTTCATCAGACCGAAATCTG+AGG - chr8_2:67374432-67374451 None:intergenic 45.0%
CAAGTGGATACAACCGTTCT+CGG + chr8_2:67374607-67374626 Msa1263970:CDS 45.0%
ATCCTTCGAAAGACCGAGAA+CGG - chr8_2:67374623-67374642 None:intergenic 45.0%
GAGCAAACAAGCTTGGCAAT+AGG - chr8_2:67374823-67374842 None:intergenic 45.0%
! TAGCACTGAGCAAACAAGCT+TGG - chr8_2:67374830-67374849 None:intergenic 45.0%
GAACATTCTGCTGGATGCAA+AGG - chr8_2:67375278-67375297 None:intergenic 45.0%
TCTCTTCAACGATTACTGGG+AGG + chr8_2:67375348-67375367 Msa1263970:CDS 45.0%
AACGATTACTGGGAGGACAT+AGG + chr8_2:67375355-67375374 Msa1263970:CDS 45.0%
GATACTCACATGCTCAGTGA+GGG - chr8_2:67375413-67375432 None:intergenic 45.0%
TGATACTCACATGCTCAGTG+AGG - chr8_2:67375414-67375433 None:intergenic 45.0%
ATACAGGACACAGTGATGCT+TGG + chr8_2:67376147-67376166 Msa1263970:intron 45.0%
CTATGAAACTGAGGCAGAAG+TGG + chr8_2:67376179-67376198 Msa1263970:CDS 45.0%
! TTAACTGCAGGGAGTACAAG+AGG + chr8_2:67376579-67376598 Msa1263970:intron 45.0%
GAGGCTGATAGATCATCAGA+AGG + chr8_2:67376598-67376617 Msa1263970:CDS 45.0%
! GAAGGGTTTTACATCCGTTC+CGG + chr8_2:67376616-67376635 Msa1263970:CDS 45.0%
ATTACACCCCCTCTACTTCG+TGG + chr8_2:67371744-67371763 Msa1263970:five_prime_UTR 50.0%
ACAAACGCCACGAAGTAGAG+GGG - chr8_2:67371754-67371773 None:intergenic 50.0%
! TTCCCATTTTGTCCCTCCTC+CGG + chr8_2:67371956-67371975 Msa1263970:five_prime_UTR 50.0%
! TTTTTCCGATCACCGGAGGA+GGG - chr8_2:67371971-67371990 None:intergenic 50.0%
!!! TTTTTTCCGATCACCGGAGG+AGG - chr8_2:67371972-67371991 None:intergenic 50.0%
!!! CCATTTTTTCCGATCACCGG+AGG - chr8_2:67371975-67371994 None:intergenic 50.0%
CCTCCGGTGATCGGAAAAAA+TGG + chr8_2:67371972-67371991 Msa1263970:exon 50.0%
GAGCTTCATGCTGCTACCAA+TGG + chr8_2:67372120-67372139 Msa1263970:CDS 50.0%
CACATCAGCAGTGAGAGACA+TGG - chr8_2:67372178-67372197 None:intergenic 50.0%
CATGTCTCTCACTGCTGATG+TGG + chr8_2:67372176-67372195 Msa1263970:CDS 50.0%
TGATGTGGCTAGCGAATCCA+AGG + chr8_2:67372191-67372210 Msa1263970:CDS 50.0%
TGCTCCCATTTCAGTGTGCA+TGG + chr8_2:67372710-67372729 Msa1263970:intron 50.0%
GCTCCCATTTCAGTGTGCAT+GGG + chr8_2:67372711-67372730 Msa1263970:intron 50.0%
AAGGGATCCAAGTACAGTCG+TGG + chr8_2:67373060-67373079 Msa1263970:CDS 50.0%
GTCGTGGCAGTTATACTTGG+TGG + chr8_2:67373076-67373095 Msa1263970:CDS 50.0%
! GTGGCAGTTATACTTGGTGG+AGG + chr8_2:67373079-67373098 Msa1263970:CDS 50.0%
! GTTATACTTGGTGGAGGAGC+TGG + chr8_2:67373085-67373104 Msa1263970:CDS 50.0%
! TCCGGTACTGGAGTCACTTT+CGG + chr8_2:67373653-67373672 Msa1263970:CDS 50.0%
TCCGAAAGTGACTCCAGTAC+CGG - chr8_2:67373657-67373676 None:intergenic 50.0%
! ACTGGAGTCACTTTCGGAGA+TGG + chr8_2:67373659-67373678 Msa1263970:CDS 50.0%
TTTCGGAGATGGCTATGTCG+AGG + chr8_2:67373670-67373689 Msa1263970:CDS 50.0%
TTGCCGCAACTCAAACTCCA+GGG + chr8_2:67373838-67373857 Msa1263970:CDS 50.0%
!! TTCCCCTGGAGTTTGAGTTG+CGG - chr8_2:67373844-67373863 None:intergenic 50.0%
ACTCAAACTCCAGGGGAACA+AGG + chr8_2:67373846-67373865 Msa1263970:CDS 50.0%
!! AAGGTACTGCTGATGCTGTG+CGG + chr8_2:67373883-67373902 Msa1263970:CDS 50.0%
!! GCAGTTTCACTGGCTCTTTG+AGG + chr8_2:67373905-67373924 Msa1263970:CDS 50.0%
TCCCAGGAGCAAGGATATTG+AGG + chr8_2:67374069-67374088 Msa1263970:CDS 50.0%
ATCCAGGATCATCGAGAGAG+CGG + chr8_2:67374249-67374268 Msa1263970:intron 50.0%
CTTGTCTGCCAATGGATGAC+AGG + chr8_2:67374289-67374308 Msa1263970:CDS 50.0%
TCTGCCAATGGATGACAGGT+AGG + chr8_2:67374293-67374312 Msa1263970:intron 50.0%
GCAACCTACCTGTCATCCAT+TGG - chr8_2:67374300-67374319 None:intergenic 50.0%
! AATCTGAGGCGCGGCTATAA+TGG - chr8_2:67374418-67374437 None:intergenic 50.0%
TATAGCCGCGCCTCAGATTT+CGG + chr8_2:67374419-67374438 Msa1263970:intron 50.0%
! GCTTTGAGCTCTGCTCCTTT+AGG - chr8_2:67374494-67374513 None:intergenic 50.0%
AGGAGCAGAGCTCAAAGCAA+TGG + chr8_2:67374496-67374515 Msa1263970:CDS 50.0%
AACCGTTCTCGGTCTTTCGA+AGG + chr8_2:67374618-67374637 Msa1263970:CDS 50.0%
! GGGAGTGTACGTCTTCAAGA+AGG + chr8_2:67374675-67374694 Msa1263970:CDS 50.0%
GCTGAGGGAAGAGTTCCAAT+AGG + chr8_2:67376213-67376232 Msa1263970:CDS 50.0%
ATACAACAGTGACGCCGGAA+CGG - chr8_2:67376633-67376652 None:intergenic 50.0%
AAAGCTCGTCCTCAAATCCG+TGG - chr8_2:67376727-67376746 None:intergenic 50.0%
CAAACGCCACGAAGTAGAGG+GGG - chr8_2:67371753-67371772 None:intergenic 55.0%
CACCGGAGGAGGGACAAAAT+GGG - chr8_2:67371961-67371980 None:intergenic 55.0%
TCACCGGAGGAGGGACAAAA+TGG - chr8_2:67371962-67371981 None:intergenic 55.0%
TTTGTCCCTCCTCCGGTGAT+CGG + chr8_2:67371963-67371982 Msa1263970:five_prime_UTR 55.0%
TCCTGGCTCACGTAGCTGAA+CGG - chr8_2:67372034-67372053 None:intergenic 55.0%
TCAGCTACGTGAGCCAGGAA+TGG + chr8_2:67372035-67372054 Msa1263970:CDS 55.0%
ATGGAGGGGCCTTGATACAG+TGG - chr8_2:67372678-67372697 None:intergenic 55.0%
CGTGCTTACAACTCCGGTAC+TGG + chr8_2:67373641-67373660 Msa1263970:CDS 55.0%
CTTGCCGCAACTCAAACTCC+AGG + chr8_2:67373837-67373856 Msa1263970:CDS 55.0%
TGCCGCAACTCAAACTCCAG+GGG + chr8_2:67373839-67373858 Msa1263970:CDS 55.0%
ATGCTGTGCGGCAGTTTCAC+TGG + chr8_2:67373895-67373914 Msa1263970:CDS 55.0%
GAAGTAGGATCCCAGGAGCA+AGG + chr8_2:67374060-67374079 Msa1263970:intron 55.0%
TGGGGATCACCTCTACCGTA+TGG + chr8_2:67374108-67374127 Msa1263970:CDS 55.0%
! TCAGACCGAAATCTGAGGCG+CGG - chr8_2:67374427-67374446 None:intergenic 55.0%
AGTGGCAGCACAGTTAGCTG+AGG + chr8_2:67376197-67376216 Msa1263970:CDS 55.0%
GTGGCAGCACAGTTAGCTGA+GGG + chr8_2:67376198-67376217 Msa1263970:CDS 55.0%
ACCGTTCAGCTACGTGAGCC+AGG + chr8_2:67372030-67372049 Msa1263970:CDS 60.0%
CACCGCTCTCTCGATGATCC+TGG - chr8_2:67374254-67374273 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 67371650 67376976 67371650 ID=Msa1263970;Name=Msa1263970
chr8_2 mRNA 67371650 67376976 67371650 ID=Msa1263970-mRNA-1;Parent=Msa1263970;Name=Msa1263970-mRNA-1;_AED=0.05;_eAED=0.05;_QI=293|1|1|1|0.93|0.87|16|286|521
chr8_2 exon 67371650 67371662 67371650 ID=Msa1263970-mRNA-1:exon:22071;Parent=Msa1263970-mRNA-1
chr8_2 exon 67371711 67372212 67371711 ID=Msa1263970-mRNA-1:exon:22072;Parent=Msa1263970-mRNA-1
chr8_2 exon 67373037 67373150 67373037 ID=Msa1263970-mRNA-1:exon:22073;Parent=Msa1263970-mRNA-1
chr8_2 exon 67373518 67373691 67373518 ID=Msa1263970-mRNA-1:exon:22074;Parent=Msa1263970-mRNA-1
chr8_2 exon 67373834 67373926 67373834 ID=Msa1263970-mRNA-1:exon:22075;Parent=Msa1263970-mRNA-1
chr8_2 exon 67374067 67374150 67374067 ID=Msa1263970-mRNA-1:exon:22076;Parent=Msa1263970-mRNA-1
chr8_2 exon 67374255 67374310 67374255 ID=Msa1263970-mRNA-1:exon:22077;Parent=Msa1263970-mRNA-1
chr8_2 exon 67374424 67374517 67374424 ID=Msa1263970-mRNA-1:exon:22078;Parent=Msa1263970-mRNA-1
chr8_2 exon 67374607 67374719 67374607 ID=Msa1263970-mRNA-1:exon:22079;Parent=Msa1263970-mRNA-1
chr8_2 exon 67374868 67374940 67374868 ID=Msa1263970-mRNA-1:exon:22080;Parent=Msa1263970-mRNA-1
chr8_2 exon 67375343 67375423 67375343 ID=Msa1263970-mRNA-1:exon:22081;Parent=Msa1263970-mRNA-1
chr8_2 exon 67375618 67375704 67375618 ID=Msa1263970-mRNA-1:exon:22082;Parent=Msa1263970-mRNA-1
chr8_2 exon 67375826 67375930 67375826 ID=Msa1263970-mRNA-1:exon:22083;Parent=Msa1263970-mRNA-1
chr8_2 exon 67376153 67376259 67376153 ID=Msa1263970-mRNA-1:exon:22084;Parent=Msa1263970-mRNA-1
chr8_2 exon 67376341 67376401 67376341 ID=Msa1263970-mRNA-1:exon:22085;Parent=Msa1263970-mRNA-1
chr8_2 exon 67376589 67376976 67376589 ID=Msa1263970-mRNA-1:exon:22086;Parent=Msa1263970-mRNA-1
chr8_2 five_prime_UTR 67371650 67371662 67371650 ID=Msa1263970-mRNA-1:five_prime_utr;Parent=Msa1263970-mRNA-1
chr8_2 five_prime_UTR 67371711 67371990 67371711 ID=Msa1263970-mRNA-1:five_prime_utr;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67371991 67372212 67371991 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67373037 67373150 67373037 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67373518 67373691 67373518 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67373834 67373926 67373834 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67374067 67374150 67374067 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67374255 67374310 67374255 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67374424 67374517 67374424 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67374607 67374719 67374607 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67374868 67374940 67374868 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67375343 67375423 67375343 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67375618 67375704 67375618 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67375826 67375930 67375826 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67376153 67376259 67376153 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67376341 67376401 67376341 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 CDS 67376589 67376690 67376589 ID=Msa1263970-mRNA-1:cds;Parent=Msa1263970-mRNA-1
chr8_2 three_prime_UTR 67376691 67376976 67376691 ID=Msa1263970-mRNA-1:three_prime_utr;Parent=Msa1263970-mRNA-1
Gene Sequence

>Msa1263970

ATGGCAGTCTCTGCCATTGGTCAGATAATGCTATCATCTACCGTTCAGCTACGTGAGCCAGGAATGGTGACCTGTAGAAACTTGAAGGTTGTGAAGTTTTGTAATGGAGAAATGATGGGACGAAAGATTGAGCTTCATGCTGCTACCAATGGTTGCACCAAGAGTGTTACTAGGAAAAATATATCCATGTCTCTCACTGCTGATGTGGCTAGCGAATCCAAGTTGAAAAATGCAGATGTGGAAAAAAGGGATCCAAGTACAGTCGTGGCAGTTATACTTGGTGGAGGAGCTGGAACCCGTCTCTTCCCTCTAACTAAGCGACGAGCAAAGCCTGCTGTTCCAATTGGAGGTGCTTATAGGCTGATTGATGTGCCAATGAGCAACTGCATCAATAGTGGGATCAACAAAGTGTATATTCTCACTCAGTTTAATTCAGCCTCACTCAACAGACATATTGCACGTGCTTACAACTCCGGTACTGGAGTCACTTTCGGAGATGGCTATGTCGAGGTTCTTGCCGCAACTCAAACTCCAGGGGAACAAGGTAAAAAGTGGTTTCAAGGTACTGCTGATGCTGTGCGGCAGTTTCACTGGCTCTTTGAGGATCCCAGGAGCAAGGATATTGAGGATGTTTTGATTCTTTCTGGGGATCACCTCTACCGTATGGACTATATGGACTTTGTTAGAGATCATCGAGAGAGCGGTGCAGATATCACTCTTTCTTGTCTGCCAATGGATGACAGCCGCGCCTCAGATTTCGGTCTGATGAAGATTGACAATAAAGGAAGGATCCTTTCATTTAGTGAAAAGCCTAAAGGAGCAGAGCTCAAAGCAATGCAAGTGGATACAACCGTTCTCGGTCTTTCGAAGGATGAAGCTCTAGAAAAACCATATATTGCTTCGATGGGAGTGTACGTCTTCAAGAAGGAGATACTTCTTAATCTATTAAGATGGCGCTTTCCAACTGCAAATGACTTTGGATCAGAGGTCATTCCTGCCTCAGCTAAAGAATTTTACATGAAGGCTTATCTCTTCAACGATTACTGGGAGGACATAGGTACCATCAGATCATTCTTTGAGGCAAATCTAGCCCTCACTGAGCATCCATCCAAGTTTAGCTTTTACGATGCAGCAAAACCTATGTACACATCAAGGAGAAATTTACCACCATCGAAGATTGACAATAGCAAGCTCGTTGATTCAATTATATCACATGGAAGCTTCGTGAATAATGCCTTCATAGAGCATAGTGTAGTTGGAATCAGATCAAGAATAAACTCAAATGTTCATTTAAAGGACACAGTGATGCTTGGAGCTGATTACTATGAAACTGAGGCAGAAGTGGCAGCACAGTTAGCTGAGGGAAGAGTTCCAATAGGAATAGGAGAAAACACCAAAATCAAAGACTGTATTATTGACAAAAATGCTAGAATTGGAAAGAATGTTGTCATAGCAAACTCAGAGGGAGTACAAGAGGCTGATAGATCATCAGAAGGGTTTTACATCCGTTCCGGCGTCACTGTTGTATTGAAAAATTCAACAATTGAAGACGGGCTCGTCATATAA

Protein sequence

>Msa1263970

MAVSAIGQIMLSSTVQLREPGMVTCRNLKVVKFCNGEMMGRKIELHAATNGCTKSVTRKNISMSLTADVASESKLKNADVEKRDPSTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHIARAYNSGTGVTFGDGYVEVLAATQTPGEQGKKWFQGTADAVRQFHWLFEDPRSKDIEDVLILSGDHLYRMDYMDFVRDHRESGADITLSCLPMDDSRASDFGLMKIDNKGRILSFSEKPKGAELKAMQVDTTVLGLSKDEALEKPYIASMGVYVFKKEILLNLLRWRFPTANDFGSEVIPASAKEFYMKAYLFNDYWEDIGTIRSFFEANLALTEHPSKFSFYDAAKPMYTSRRNLPPSKIDNSKLVDSIISHGSFVNNAFIEHSVVGIRSRINSNVHLKDTVMLGADYYETEAEVAAQLAEGRVPIGIGENTKIKDCIIDKNARIGKNVVIANSEGVQEADRSSEGFYIRSGVTVVLKNSTIEDGLVI*