AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1029320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029320 MtrunA17_Chr7g0249581 95.560 473 10 4 3 469 4 471 0.0 907
Msa1029320 MtrunA17_Chr1g0172361 41.989 362 203 5 94 455 62 416 1.16e-84 266
Msa1029320 MtrunA17_Chr7g0271771 40.625 352 205 2 105 455 116 464 4.48e-80 256
Msa1029320 MtrunA17_Chr7g0270701 31.445 353 221 8 117 455 49 394 3.65e-40 149
Msa1029320 MtrunA17_Chr7g0268791 34.340 265 169 4 190 453 134 394 5.76e-38 143
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029320 AT5G36170.1 77.037 405 89 1 65 469 56 456 0.0 657
Msa1029320 AT5G36170.2 77.228 404 88 1 66 469 56 455 0.0 656
Msa1029320 AT5G36170.3 75.082 305 72 1 65 369 56 356 4.38e-167 476
Msa1029320 AT5G36170.4 75.329 304 71 1 66 369 56 355 9.80e-167 475
Msa1029320 AT1G56350.1 37.500 384 225 3 72 455 103 471 2.51e-78 252
Msa1029320 AT3G57190.1 35.405 370 224 6 94 461 47 403 3.54e-68 223
Msa1029320 AT3G62910.1 31.861 317 203 5 142 453 89 397 6.30e-42 154
Msa1029320 AT2G47020.4 30.769 312 206 6 150 455 26 333 4.60e-33 128
Msa1029320 AT2G47020.1 30.769 312 206 6 150 455 91 398 9.28e-33 129
Msa1029320 AT2G47020.3 28.698 338 205 6 150 455 91 424 1.98e-29 120
Msa1029320 AT2G47020.5 29.825 228 153 3 150 373 91 315 3.41e-24 103

Find 137 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTGACTCAACTTCTTTC+TGG 0.090679 7_1:-62760687 Msa1029320:CDS
CGAAGACCTTTGGAATTAAA+AGG 0.167157 7_1:+62759863 None:intergenic
ATCATCTGGTCTACAATTAT+TGG 0.231180 7_1:-62761362 Msa1029320:CDS
TAAGGTTGTCTTATGTAAAA+AGG 0.268179 7_1:+62763254 None:intergenic
AAGCATCTTGTAGCTCCTTT+TGG 0.269602 7_1:-62761312 Msa1029320:CDS
TATGCGTATGGGTATTTGTC+TGG 0.283774 7_1:-62759920 Msa1029320:CDS
CTAATCTCCAAGTCCTCTTC+TGG 0.294453 7_1:+62759667 None:intergenic
ACTGGGCGGACATGCTTCTT+AGG 0.312508 7_1:-62760051 Msa1029320:CDS
TCAACATTCAAAGATTCTTC+TGG 0.317964 7_1:+62759694 None:intergenic
CTCTGTTATGGATGGAGAAT+TGG 0.333602 7_1:-62759040 Msa1029320:CDS
GAAATGGAATCCGTTGATAA+AGG 0.334721 7_1:-62760768 Msa1029320:CDS
TCATACTATACTTGTGTTTG+AGG 0.356154 7_1:+62758998 None:intergenic
ACTGAATTTAAACAGATTAG+AGG 0.374587 7_1:-62759168 Msa1029320:CDS
GTTAGTGGTTACGCGGTCTA+AGG 0.381092 7_1:+62763236 None:intergenic
ACATCCTTTACTAGTTTGTA+TGG 0.386451 7_1:+62759093 None:intergenic
ATAAGAAGACCGAAAGGCTT+TGG 0.391828 7_1:+62763081 None:intergenic
TCCATAACAGAGGTGATATC+TGG 0.399290 7_1:+62759051 None:intergenic
AGTTATGCTGACAGAGGAAA+TGG 0.399496 7_1:-62760784 Msa1029320:CDS
ACCAGATATCACCTCTGTTA+TGG 0.400399 7_1:-62759052 Msa1029320:CDS
ATCTCTATTACAGCAGGTGC+GGG 0.401610 7_1:-62760639 Msa1029320:CDS
GGACGTAGTGAAGGCTGAAT+GGG 0.404216 7_1:-62759145 Msa1029320:CDS
AGAATCAATTGAGCAGCGTT+GGG 0.411480 7_1:-62762825 Msa1029320:CDS
GAAGACCTTTGGAATTAAAA+GGG 0.418012 7_1:+62759864 None:intergenic
CGAAAGAGTCTGTTGAGCTT+TGG 0.418363 7_1:+62761279 None:intergenic
TATCGTTCCTCTCCATTGAA+TGG 0.420444 7_1:+62758933 None:intergenic
CTAGTAAAGGATGTAAGAAC+AGG 0.421372 7_1:-62759084 Msa1029320:CDS
TTCTCAAGAGCGGGTGGAAA+AGG 0.423998 7_1:-62759643 Msa1029320:CDS
CTGTAACCGCCAAAGCCTTT+CGG 0.424092 7_1:-62763090 Msa1029320:CDS
TATTACCTGACGAAGACCTT+TGG 0.425839 7_1:+62759853 None:intergenic
ATTGAGCAGCGTTGGGGAAG+GGG 0.428787 7_1:-62762818 Msa1029320:CDS
TGAAATTCCAGAAGAGGACT+TGG 0.431477 7_1:-62759674 Msa1029320:CDS
ATGCGTATGGGTATTTGTCT+GGG 0.432886 7_1:-62759919 Msa1029320:CDS
TTTGTTCCGGATATGGTTAG+TGG 0.438705 7_1:+62763221 None:intergenic
TTCCTTTACCTCCCATTCAA+TGG 0.441158 7_1:-62758945 Msa1029320:three_prime_UTR
ACAAGTGATTCTGCACTTCA+AGG 0.445520 7_1:-62762781 Msa1029320:intron
CAGCGTTGGGGAAGGGGAGG+AGG 0.451858 7_1:-62762812 Msa1029320:CDS
GGGACGTAGTGAAGGCTGAA+TGG 0.461610 7_1:-62759146 Msa1029320:CDS
AAATGGAATCCGTTGATAAA+GGG 0.463579 7_1:-62760767 Msa1029320:CDS
GGGTATTTGTCTGGGGAGAA+AGG 0.464816 7_1:-62759911 Msa1029320:CDS
GTACCAGGTGATAGAGGAAA+AGG 0.465544 7_1:+62762959 None:intergenic
AAATCTCTTGGAGAAGAAGC+TGG 0.467752 7_1:-62759977 Msa1029320:CDS
TTCAATGGAGAGGAACGATA+TGG 0.469674 7_1:-62758930 Msa1029320:three_prime_UTR
GAAGAAGAAGAGGAAAATTG+TGG 0.474217 7_1:+62763040 None:intergenic
TAATTCCAAAGGTCTTCGTC+AGG 0.477891 7_1:-62759858 Msa1029320:intron
TCTTAGGATGTATGTGAGAT+GGG 0.480416 7_1:-62760035 Msa1029320:CDS
AAGGAACACATCGCATTGTT+CGG 0.481188 7_1:-62759892 Msa1029320:CDS
GAGAATCAATTGAGCAGCGT+TGG 0.482723 7_1:-62762826 Msa1029320:CDS
CGAATTACACATATCCCAAC+TGG 0.485827 7_1:-62759586 Msa1029320:CDS
CTCCATTGAATGGGAGGTAA+AGG 0.485994 7_1:+62758943 None:intergenic
CCTTTACTAGTTTGTATGGA+TGG 0.486525 7_1:+62759097 None:intergenic
ATCGTTCCTCTCCATTGAAT+GGG 0.486855 7_1:+62758934 None:intergenic
AGAGTGGTTGAGAAATCTCT+TGG 0.487977 7_1:-62759989 Msa1029320:CDS
GTTGAAGGCCGTTATGCGTA+TGG 0.489416 7_1:-62759932 Msa1029320:CDS
CTGAATTTAAACAGATTAGA+GGG 0.492217 7_1:-62759167 Msa1029320:CDS
TCTGCCACCATTGAAGTTGA+AGG 0.498852 7_1:-62759947 Msa1029320:CDS
AGAAGGACGATGAGAGAGAG+TGG 0.500748 7_1:+62762982 None:intergenic
AGATGCTTCCTCTTCCAACT+TGG 0.503424 7_1:+62761327 None:intergenic
GAAACAGTACCAGGTGATAG+AGG 0.505914 7_1:+62762953 None:intergenic
GAATGTTGAAATTCCAGAAG+AGG 0.507034 7_1:-62759680 Msa1029320:CDS
GAGATTAGCTTCTCAAGAGC+GGG 0.508195 7_1:-62759652 Msa1029320:CDS
TCAACAGACTCTTTCGACAT+TGG 0.508700 7_1:-62761272 Msa1029320:CDS
TTTGGCTCGGTCGTCCCAAA+AGG 0.511359 7_1:+62761297 None:intergenic
GCGTAACCACTAACCATATC+CGG 0.514074 7_1:-62763227 Msa1029320:five_prime_UTR
TCTGGTCCTTACGATAAAGA+AGG 0.518302 7_1:-62760669 Msa1029320:CDS
CGATATGGTTGTTGTGTCAT+GGG 0.519827 7_1:-62758915 Msa1029320:three_prime_UTR
AAAGAGATTAGAGAATCATC+TGG 0.520355 7_1:-62761376 Msa1029320:CDS
GGAGCAAGAACTTGCCAAGT+TGG 0.521085 7_1:-62761341 Msa1029320:CDS
GAAAATTGTGGAATGAGAAA+TGG 0.522245 7_1:+62763052 None:intergenic
TTCATAAAGCCCTTTATCAA+CGG 0.525372 7_1:+62760758 None:intergenic
GGTGTCACTCTTCGCTGCAC+AGG 0.525481 7_1:-62759565 Msa1029320:intron
AATTGAGCAGCGTTGGGGAA+GGG 0.525505 7_1:-62762819 Msa1029320:CDS
AAAGATTCTTCTGGAAGAAG+AGG 0.527140 7_1:+62759703 None:intergenic
CAATTGAGCAGCGTTGGGGA+AGG 0.530209 7_1:-62762820 Msa1029320:CDS
AGCGAAGAGTGACACCAGTT+GGG 0.530416 7_1:+62759572 None:intergenic
CTCTATTACAGCAGGTGCGG+GGG 0.530860 7_1:-62760637 Msa1029320:CDS
CCATCCATACAAACTAGTAA+AGG 0.535045 7_1:-62759097 Msa1029320:CDS
ATAACGGCCTTCAACTTCAA+TGG 0.535277 7_1:+62759940 None:intergenic
AGAACTTGCCAAGTTGGAAG+AGG 0.536733 7_1:-62761335 Msa1029320:CDS
ATGTGGTGAAGAAGAAGAAG+AGG 0.537138 7_1:+62763030 None:intergenic
TTTGAGGTAAGATTTGATGA+AGG 0.537806 7_1:+62759014 None:intergenic
GAAGCGATTCGTTTAAGTCA+TGG 0.539968 7_1:-62763149 Msa1029320:exon
ACGCTGCTCAATTGATTCTC+CGG 0.541033 7_1:+62762829 None:intergenic
AAGAGATTTCTCAACCACTC+TGG 0.542572 7_1:+62759991 None:intergenic
AGTAGTTCTGTTTGTGACGC+CGG 0.544633 7_1:-62762848 Msa1029320:CDS
TTGAGGTAAGATTTGATGAA+GGG 0.548656 7_1:+62759015 None:intergenic
GAGTCTGTTGAGCTTTGGCT+CGG 0.551498 7_1:+62761284 None:intergenic
AGAAGACCGAAAGGCTTTGG+CGG 0.551599 7_1:+62763084 None:intergenic
ACAGCACCTTCTTTATCGTA+AGG 0.555154 7_1:+62760663 None:intergenic
ACAAATACCCATACGCATAA+CGG 0.557181 7_1:+62759924 None:intergenic
GCTGTTATCTCTATTACAGC+AGG 0.558128 7_1:-62760645 Msa1029320:CDS
CAGCGAAGAGTGACACCAGT+TGG 0.559310 7_1:+62759571 None:intergenic
TGGTGTAGTAGCAGCACAGA+GGG 0.560056 7_1:+62763113 None:intergenic
TTCTTAGGATGTATGTGAGA+TGG 0.564227 7_1:-62760036 Msa1029320:CDS
GAGCAGCGTTGGGGAAGGGG+AGG 0.570391 7_1:-62762815 Msa1029320:CDS
AACTGAATAAGTCAATTGAT+CGG 0.574053 7_1:-62760713 Msa1029320:CDS
GATATCACCTCTGTTATGGA+TGG 0.574268 7_1:-62759048 Msa1029320:CDS
ACGATATGGTTGTTGTGTCA+TGG 0.576481 7_1:-62758916 Msa1029320:three_prime_UTR
TTGAAGGCCGTTATGCGTAT+GGG 0.580211 7_1:-62759931 Msa1029320:CDS
TCTCTATTACAGCAGGTGCG+GGG 0.580958 7_1:-62760638 Msa1029320:CDS
AAGACCTTTGGAATTAAAAG+GGG 0.580978 7_1:+62759865 None:intergenic
ACAAAATAACTTACGCACGC+AGG 0.583163 7_1:-62763203 Msa1029320:five_prime_UTR
TATCTCTATTACAGCAGGTG+CGG 0.584564 7_1:-62760640 Msa1029320:CDS
GGTGATAGAGGAAAAGGAGA+AGG 0.593572 7_1:+62762965 None:intergenic
GATTAGAGGGGACGTAGTGA+AGG 0.600180 7_1:-62759154 Msa1029320:CDS
TGCGTATGGGTATTTGTCTG+GGG 0.601450 7_1:-62759918 Msa1029320:CDS
GGAGATTAGCTTCTCAAGAG+CGG 0.603522 7_1:-62759653 Msa1029320:CDS
AGTATGACAATGTCTACAAG+TGG 0.605383 7_1:-62758982 Msa1029320:CDS
TCGTTTGAAAGCAAAGCTGT+TGG 0.607368 7_1:-62759214 Msa1029320:CDS
AAAGATAAGAAAGGAAAATG+TGG 0.609177 7_1:+62763013 None:intergenic
TCAAGAGCGGGTGGAAAAGG+AGG 0.611511 7_1:-62759640 Msa1029320:CDS
AAAGGCTTTGGCGGTTACAG+TGG 0.617064 7_1:+62763093 None:intergenic
GCTCAATGACTACAAAACTC+AGG 0.619358 7_1:-62761224 Msa1029320:intron
TTACCTCCCATTCAATGGAG+AGG 0.623862 7_1:-62758940 Msa1029320:three_prime_UTR
TGGGATATGTGTAATTCGAA+CGG 0.626225 7_1:+62759591 None:intergenic
ATTAGCTTCTCAAGAGCGGG+TGG 0.632510 7_1:-62759649 Msa1029320:CDS
AGGAGGTCAGAATGTTAACA+AGG 0.634298 7_1:-62759623 Msa1029320:CDS
GATGAGAGAGAGTGGTGGTG+CGG 0.635635 7_1:+62762990 None:intergenic
GTATGACAATGTCTACAAGT+GGG 0.640154 7_1:-62758981 Msa1029320:CDS
GTTCCTCTCCATTGAATGGG+AGG 0.640753 7_1:+62758937 None:intergenic
GAATCAATTGAGCAGCGTTG+GGG 0.643618 7_1:-62762824 Msa1029320:CDS
GACGTAGTGAAGGCTGAATG+GGG 0.649092 7_1:-62759144 Msa1029320:CDS
AACAATAGTTATGCTGACAG+AGG 0.660154 7_1:-62760790 Msa1029320:CDS
TTGTTTATAAGAAGACCGAA+AGG 0.661726 7_1:+62763075 None:intergenic
ACGGCCTTCAACTTCAATGG+TGG 0.663797 7_1:+62759943 None:intergenic
TGAATTTAAACAGATTAGAG+GGG 0.664702 7_1:-62759166 Msa1029320:CDS
TCTATTACAGCAGGTGCGGG+GGG 0.666377 7_1:-62760636 Msa1029320:CDS
GCGATTCGTTTAAGTCATGG+AGG 0.672836 7_1:-62763146 Msa1029320:exon
AGGACGATGAGAGAGAGTGG+TGG 0.676872 7_1:+62762985 None:intergenic
TAGTAAAGGATGTAAGAACA+GGG 0.680485 7_1:-62759083 Msa1029320:CDS
CAATTCTCCATCCATAACAG+AGG 0.681172 7_1:+62759041 None:intergenic
TATGACAATGTCTACAAGTG+GGG 0.682661 7_1:-62758980 Msa1029320:CDS
GTGGTGCGGAAAGATAAGAA+AGG 0.682965 7_1:+62763004 None:intergenic
CTTAGGATGTATGTGAGATG+GGG 0.691263 7_1:-62760034 Msa1029320:CDS
ATTTCCAGTGCAGGACTGGG+CGG 0.700162 7_1:-62760065 Msa1029320:intron
GTGGTGTAGTAGCAGCACAG+AGG 0.714809 7_1:+62763112 None:intergenic
GGATATGGTTAGTGGTTACG+CGG 0.719332 7_1:+62763229 None:intergenic
ACAGAGATACAAAACCAGAG+TGG 0.753790 7_1:-62760005 Msa1029320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTATACTAATAAATAAAT+TGG - chr7_1:62760931-62760950 Msa1029320:intron 10.0%
!!! TACTTTTCTTTTTTAAATCA+CGG - chr7_1:62760151-62760170 Msa1029320:intron 15.0%
!!! TATTTTCTAATTGAATAAGT+AGG - chr7_1:62760446-62760465 Msa1029320:intron 15.0%
!!! GATATAATTCTGAATATTTT+AGG - chr7_1:62760877-62760896 Msa1029320:intron 15.0%
!!! TTTTTGTTTCTAAATCTTTA+CGG + chr7_1:62761000-62761019 None:intergenic 15.0%
!! TTAGAAACAAAAATTAATGA+AGG - chr7_1:62761007-62761026 Msa1029320:intron 15.0%
!! AAAAGATTTGAACTAAAGTA+CGG + chr7_1:62759367-62759386 None:intergenic 20.0%
!! TACTAATATCATAAAATCAC+CGG + chr7_1:62759442-62759461 None:intergenic 20.0%
!!! TGATATTAGTATTTAGAATG+AGG - chr7_1:62759451-62759470 Msa1029320:intron 20.0%
!!! TTCATATTCAGTTTGTTTTA+TGG - chr7_1:62759579-62759598 Msa1029320:CDS 20.0%
!!! AGTTGATACAATAAAACATT+TGG + chr7_1:62760051-62760070 None:intergenic 20.0%
!!! AACTTTTGTTTTTCAACTAT+GGG - chr7_1:62760067-62760086 Msa1029320:intron 20.0%
!! GAAAATAAATTGCAATCATT+TGG + chr7_1:62760433-62760452 None:intergenic 20.0%
!! TTCTTTAGATTTAAGTCATT+CGG - chr7_1:62760496-62760515 Msa1029320:intron 20.0%
!! ATGAAAAAACAAGTTTATTG+TGG + chr7_1:62761506-62761525 None:intergenic 20.0%
!!! CAATAAATTTTTTACCTCTA+GGG + chr7_1:62761535-62761554 None:intergenic 20.0%
!!! ACAATAAATTTTTTACCTCT+AGG + chr7_1:62761536-62761555 None:intergenic 20.0%
!! TATTGTCTGATATATTATAC+TGG - chr7_1:62761550-62761569 Msa1029320:intron 20.0%
!!! TTTCTAAAAAATAGTCATCT+TGG - chr7_1:62761820-62761839 Msa1029320:intron 20.0%
!!! TAATAACTTACTTTTTTGGT+TGG - chr7_1:62762240-62762259 Msa1029320:intron 20.0%
!! CTGTTCAAATAATACAATAT+GGG + chr7_1:62762325-62762344 None:intergenic 20.0%
!! TCTGTTCAAATAATACAATA+TGG + chr7_1:62762326-62762345 None:intergenic 20.0%
! TCTTATGTAAAAAGGTTGTT+TGG + chr7_1:62758816-62758835 None:intergenic 25.0%
! TAAGGTTGTCTTATGTAAAA+AGG + chr7_1:62758824-62758843 None:intergenic 25.0%
! AAAGATAAGAAAGGAAAATG+TGG + chr7_1:62759065-62759084 None:intergenic 25.0%
!!! TCTTGTATAGCATTTTGAAA+TGG - chr7_1:62759826-62759845 Msa1029320:intron 25.0%
!!! ATTTTAAAGCTGAAAGTCAA+GGG + chr7_1:62759993-62760012 None:intergenic 25.0%
!!! TATTTTAAAGCTGAAAGTCA+AGG + chr7_1:62759994-62760013 None:intergenic 25.0%
! TTAAAATAAGTCATCATGAC+TGG - chr7_1:62760006-62760025 Msa1029320:CDS 25.0%
!!! CAACTTTTGTTTTTCAACTA+TGG - chr7_1:62760066-62760085 Msa1029320:intron 25.0%
!!! ACTTTTGTTTTTCAACTATG+GGG - chr7_1:62760068-62760087 Msa1029320:intron 25.0%
! ATATACTGCATCATAATGTA+TGG - chr7_1:62760553-62760572 Msa1029320:intron 25.0%
! TATACTGCATCATAATGTAT+GGG - chr7_1:62760554-62760573 Msa1029320:intron 25.0%
!!! ATTAGTTTTGAAGTATCACT+CGG - chr7_1:62760616-62760635 Msa1029320:intron 25.0%
! AACTGAATAAGTCAATTGAT+CGG - chr7_1:62761362-62761381 Msa1029320:CDS 25.0%
! GATATATTATACTGGTAGAA+CGG - chr7_1:62761558-62761577 Msa1029320:intron 25.0%
! GAAAAAAAAACAGCATAACA+AGG + chr7_1:62761848-62761867 None:intergenic 25.0%
!!! CAGGTAATAACTTACTTTTT+TGG - chr7_1:62762236-62762255 Msa1029320:intron 25.0%
!!! TCTGTTTTTATTCTTCTGAA+AGG - chr7_1:62762551-62762570 Msa1029320:intron 25.0%
!!! CTGTTTTTATTCTTCTGAAA+GGG - chr7_1:62762552-62762571 Msa1029320:intron 25.0%
!!! CATTTCAAATTGAGTTGATA+AGG + chr7_1:62762610-62762629 None:intergenic 25.0%
! ACTGAATTTAAACAGATTAG+AGG - chr7_1:62762907-62762926 Msa1029320:intron 25.0%
! CTGAATTTAAACAGATTAGA+GGG - chr7_1:62762908-62762927 Msa1029320:intron 25.0%
! TGAATTTAAACAGATTAGAG+GGG - chr7_1:62762909-62762928 Msa1029320:intron 25.0%
! TAGTGATAAAAAGTAGTTTG+TGG - chr7_1:62763272-62763291 Msa1029320:five_prime_UTR 25.0%
!! AAGTTATTTTGTTCCGGATA+TGG + chr7_1:62758864-62758883 None:intergenic 30.0%
TTGTTTATAAGAAGACCGAA+AGG + chr7_1:62759003-62759022 None:intergenic 30.0%
GAAAATTGTGGAATGAGAAA+TGG + chr7_1:62759026-62759045 None:intergenic 30.0%
AATAGAATAGAAACAGTACC+AGG + chr7_1:62759134-62759153 None:intergenic 30.0%
! CATTTTCACTTCAAAACACA+GGG + chr7_1:62759506-62759525 None:intergenic 30.0%
!! CAGTTACTTTGAAACTAATG+TGG + chr7_1:62759532-62759551 None:intergenic 30.0%
! CACATTAGTTTCAAAGTAAC+TGG - chr7_1:62759530-62759549 Msa1029320:intron 30.0%
TGGTTAAGATTGTATGTAGT+AGG - chr7_1:62759599-62759618 Msa1029320:CDS 30.0%
ATTTAGTGAAGTCAAGAAGT+TGG + chr7_1:62759669-62759688 None:intergenic 30.0%
CTGATGTGCATAATTTAAAG+TGG - chr7_1:62759967-62759986 Msa1029320:CDS 30.0%
ACACTCTTAAGGATTGATAT+AGG - chr7_1:62760340-62760359 Msa1029320:intron 30.0%
GCAGTATATGCTTATACAAA+AGG + chr7_1:62760542-62760561 None:intergenic 30.0%
ATACTGCATCATAATGTATG+GGG - chr7_1:62760555-62760574 Msa1029320:intron 30.0%
ATAGTCGCTAAAATCAATTC+CGG - chr7_1:62760593-62760612 Msa1029320:intron 30.0%
GTGATACTTCAAAACTAATC+CGG + chr7_1:62760615-62760634 None:intergenic 30.0%
! TTGCAGATTTTTATTCTCTG+AGG - chr7_1:62760646-62760665 Msa1029320:CDS 30.0%
!! AGATTTTTATTCTCTGAGGA+AGG - chr7_1:62760650-62760669 Msa1029320:CDS 30.0%
AAAGAGATTAGAGAATCATC+TGG - chr7_1:62760699-62760718 Msa1029320:CDS 30.0%
ATCATCTGGTCTACAATTAT+TGG - chr7_1:62760713-62760732 Msa1029320:CDS 30.0%
GTATAGATATTACTGCATGT+CGG + chr7_1:62760919-62760938 None:intergenic 30.0%
! ACAAATCGATCTCTCTTTTA+AGG - chr7_1:62761178-62761197 Msa1029320:intron 30.0%
! AAATGGAATCCGTTGATAAA+GGG - chr7_1:62761308-62761327 Msa1029320:CDS 30.0%
TTCATAAAGCCCTTTATCAA+CGG + chr7_1:62761320-62761339 None:intergenic 30.0%
TTAAAAATGTTGAGACAGAG+AGG + chr7_1:62761670-62761689 None:intergenic 30.0%
! CAACATTTTTAAACTTCTCC+AGG - chr7_1:62761678-62761697 Msa1029320:intron 30.0%
CTGTCATAAGCATTTAAATC+TGG - chr7_1:62761744-62761763 Msa1029320:intron 30.0%
! TTTTCCATTTGCGTTTTTCT+TGG - chr7_1:62761940-62761959 Msa1029320:intron 30.0%
TATTCCAAGAAAAACGCAAA+TGG + chr7_1:62761947-62761966 None:intergenic 30.0%
!! AAGACCTTTGGAATTAAAAG+GGG + chr7_1:62762213-62762232 None:intergenic 30.0%
!! GAAGACCTTTGGAATTAAAA+GGG + chr7_1:62762214-62762233 None:intergenic 30.0%
!! TCTGTGCATTTGATAATGAA+AGG + chr7_1:62762287-62762306 None:intergenic 30.0%
TCAACATTCAAAGATTCTTC+TGG + chr7_1:62762384-62762403 None:intergenic 30.0%
GAAGAATAAAAACAGAGCAA+AGG + chr7_1:62762547-62762566 None:intergenic 30.0%
!! TTTTTATTCTTCTGAAAGGG+AGG - chr7_1:62762555-62762574 Msa1029320:intron 30.0%
GATTTAATAACCTTCTCTAC+AGG - chr7_1:62762631-62762650 Msa1029320:intron 30.0%
GTGTTAGTATGGATCTAATT+CGG - chr7_1:62762742-62762761 Msa1029320:intron 30.0%
! ACATCCTTTACTAGTTTGTA+TGG + chr7_1:62762985-62763004 None:intergenic 30.0%
TAGTAAAGGATGTAAGAACA+GGG - chr7_1:62762992-62763011 Msa1029320:CDS 30.0%
TTGAGGTAAGATTTGATGAA+GGG + chr7_1:62763063-62763082 None:intergenic 30.0%
! TTTGAGGTAAGATTTGATGA+AGG + chr7_1:62763064-62763083 None:intergenic 30.0%
TCATACTATACTTGTGTTTG+AGG + chr7_1:62763080-62763099 None:intergenic 30.0%
!! GTGCGTAAGTTATTTTGTTC+CGG + chr7_1:62758870-62758889 None:intergenic 35.0%
GAAGAAGAAGAGGAAAATTG+TGG + chr7_1:62759038-62759057 None:intergenic 35.0%
ACAAACAGAACTACTGTGAA+AGG + chr7_1:62759222-62759241 None:intergenic 35.0%
! CCATTTTCACTTCAAAACAC+AGG + chr7_1:62759507-62759526 None:intergenic 35.0%
!!! CCTGTGTTTTGAAGTGAAAA+TGG - chr7_1:62759504-62759523 Msa1029320:intron 35.0%
!! ACCAAGTTTTCAAGGGATTT+GGG + chr7_1:62759643-62759662 None:intergenic 35.0%
CAATTTACAACACTAAGTGG+GGG + chr7_1:62759718-62759737 None:intergenic 35.0%
GCAATTTACAACACTAAGTG+GGG + chr7_1:62759719-62759738 None:intergenic 35.0%
CGCAATTTACAACACTAAGT+GGG + chr7_1:62759720-62759739 None:intergenic 35.0%
TTGTACTGAACAGTGTATTG+TGG + chr7_1:62759770-62759789 None:intergenic 35.0%
ATGGGGAAACAAAACACTTA+AGG - chr7_1:62760085-62760104 Msa1029320:intron 35.0%
TGGGGAAACAAAACACTTAA+GGG - chr7_1:62760086-62760105 Msa1029320:intron 35.0%
! AAAACACTTAAGGGTGTGTT+TGG - chr7_1:62760095-62760114 Msa1029320:intron 35.0%
TGTTTGGATTGAGTTTAGGA+GGG - chr7_1:62760111-62760130 Msa1029320:intron 35.0%
! TCAATCCTTAAGAGTGTGTT+TGG + chr7_1:62760337-62760356 None:intergenic 35.0%
GAATAAGTAGGTTTGCACAT+TGG - chr7_1:62760458-62760477 Msa1029320:intron 35.0%
TACAAAAGGAAGAGAGAAAC+AGG + chr7_1:62760528-62760547 None:intergenic 35.0%
! CTTTTAAATGCCTTACGAAC+TGG - chr7_1:62760974-62760993 Msa1029320:intron 35.0%
CTTTCTTGCACTTAATTAGC+AGG + chr7_1:62761068-62761087 None:intergenic 35.0%
TAGCCATGTTTATAAGTCTG+CGG + chr7_1:62761129-62761148 None:intergenic 35.0%
ATAGTGGCACATGATTAGAT+TGG + chr7_1:62761243-62761262 None:intergenic 35.0%
! AATCTAATCATGTGCCACTA+TGG - chr7_1:62761242-62761261 Msa1029320:CDS 35.0%
AACAATAGTTATGCTGACAG+AGG - chr7_1:62761285-62761304 Msa1029320:CDS 35.0%
! GAAATGGAATCCGTTGATAA+AGG - chr7_1:62761307-62761326 Msa1029320:CDS 35.0%
ATTGTGGTAACACTTGTACA+TGG + chr7_1:62761490-62761509 None:intergenic 35.0%
!!! AATTTTTTACCTCTAGGGCT+AGG + chr7_1:62761530-62761549 None:intergenic 35.0%
ATATTATACTGGTAGAACGG+AGG - chr7_1:62761561-62761580 Msa1029320:intron 35.0%
GAACTTGTAAGTTGTATGTC+AGG - chr7_1:62761583-62761602 Msa1029320:intron 35.0%
TGAACAAATTTCAGAAAGCC+TGG + chr7_1:62761699-62761718 None:intergenic 35.0%
CTTGGAATATGAGTACTTTG+TGG - chr7_1:62761958-62761977 Msa1029320:intron 35.0%
TTCTTAGGATGTATGTGAGA+TGG - chr7_1:62762039-62762058 Msa1029320:intron 35.0%
TCTTAGGATGTATGTGAGAT+GGG - chr7_1:62762040-62762059 Msa1029320:intron 35.0%
ACAAATACCCATACGCATAA+CGG + chr7_1:62762154-62762173 None:intergenic 35.0%
!! CAATCCCCTTTTAATTCCAA+AGG - chr7_1:62762206-62762225 Msa1029320:intron 35.0%
!! CGAAGACCTTTGGAATTAAA+AGG + chr7_1:62762215-62762234 None:intergenic 35.0%
! TTTGAACAGACAAGCTTTTC+TGG - chr7_1:62762336-62762355 Msa1029320:intron 35.0%
! AAAGATTCTTCTGGAAGAAG+AGG + chr7_1:62762375-62762394 None:intergenic 35.0%
GAATGTTGAAATTCCAGAAG+AGG - chr7_1:62762395-62762414 Msa1029320:intron 35.0%
TGGGATATGTGTAATTCGAA+CGG + chr7_1:62762487-62762506 None:intergenic 35.0%
ATAACAGAAACCTGTAGAGA+AGG + chr7_1:62762644-62762663 None:intergenic 35.0%
CCATACTAACACAAAAGAAG+TGG + chr7_1:62762734-62762753 None:intergenic 35.0%
! CCACTTCTTTTGTGTTAGTA+TGG - chr7_1:62762731-62762750 Msa1029320:intron 35.0%
! CCTTTACTAGTTTGTATGGA+TGG + chr7_1:62762981-62763000 None:intergenic 35.0%
CCATCCATACAAACTAGTAA+AGG - chr7_1:62762978-62762997 Msa1029320:CDS 35.0%
CTAGTAAAGGATGTAAGAAC+AGG - chr7_1:62762991-62763010 Msa1029320:CDS 35.0%
AGTATGACAATGTCTACAAG+TGG - chr7_1:62763093-62763112 Msa1029320:CDS 35.0%
GTATGACAATGTCTACAAGT+GGG - chr7_1:62763094-62763113 Msa1029320:CDS 35.0%
TATGACAATGTCTACAAGTG+GGG - chr7_1:62763095-62763114 Msa1029320:CDS 35.0%
TTTGTTCCGGATATGGTTAG+TGG + chr7_1:62758857-62758876 None:intergenic 40.0%
ACAAAATAACTTACGCACGC+AGG - chr7_1:62758872-62758891 Msa1029320:three_prime_UTR 40.0%
GAAGCGATTCGTTTAAGTCA+TGG - chr7_1:62758926-62758945 Msa1029320:three_prime_UTR 40.0%
ATAAGAAGACCGAAAGGCTT+TGG + chr7_1:62758997-62759016 None:intergenic 40.0%
ATGTGGTGAAGAAGAAGAAG+AGG + chr7_1:62759048-62759067 None:intergenic 40.0%
AGAATCAATTGAGCAGCGTT+GGG - chr7_1:62759250-62759269 Msa1029320:CDS 40.0%
ACAAGTGATTCTGCACTTCA+AGG - chr7_1:62759294-62759313 Msa1029320:intron 40.0%
!! TATCATAAAATCACCGGCTC+TGG + chr7_1:62759436-62759455 None:intergenic 40.0%
AAAACACAGGGATTCTACGA+GGG + chr7_1:62759494-62759513 None:intergenic 40.0%
ACCCAAATCCCTTGAAAACT+TGG - chr7_1:62759639-62759658 Msa1029320:CDS 40.0%
!! GACCAAGTTTTCAAGGGATT+TGG + chr7_1:62759644-62759663 None:intergenic 40.0%
! TTGGCTGACCAAGTTTTCAA+GGG + chr7_1:62759650-62759669 None:intergenic 40.0%
GCGCAATTTACAACACTAAG+TGG + chr7_1:62759721-62759740 None:intergenic 40.0%
GGTGTGTTTGGATTGAGTTT+AGG - chr7_1:62760107-62760126 Msa1029320:intron 40.0%
GTGTTTGGATTGAGTTTAGG+AGG - chr7_1:62760110-62760129 Msa1029320:intron 40.0%
GTTTGGATTGAGTTTAGGAG+GGG - chr7_1:62760112-62760131 Msa1029320:intron 40.0%
GATTTAGGAGGCAAAGAGAA+GGG + chr7_1:62760308-62760327 None:intergenic 40.0%
TGTGTTTGGATGGAGGATTT+AGG + chr7_1:62760323-62760342 None:intergenic 40.0%
! TTAAGAGTGTGTTTGGATGG+AGG + chr7_1:62760330-62760349 None:intergenic 40.0%
TCCATCCAAACACACTCTTA+AGG - chr7_1:62760329-62760348 Msa1029320:intron 40.0%
! TCCTTAAGAGTGTGTTTGGA+TGG + chr7_1:62760333-62760352 None:intergenic 40.0%
!! TGCACATTGGTGTTATCATG+AGG - chr7_1:62760471-62760490 Msa1029320:intron 40.0%
GTATGGGGTGAATCAATTAG+AGG - chr7_1:62760570-62760589 Msa1029320:intron 40.0%
! AAGCATCTTGTAGCTCCTTT+TGG - chr7_1:62760763-62760782 Msa1029320:CDS 40.0%
! AGCATCTTGTAGCTCCTTTT+GGG - chr7_1:62760764-62760783 Msa1029320:CDS 40.0%
TCAACAGACTCTTTCGACAT+TGG - chr7_1:62760803-62760822 Msa1029320:CDS 40.0%
GCTCAATGACTACAAAACTC+AGG - chr7_1:62760851-62760870 Msa1029320:intron 40.0%
AGCCATGTTTATAAGTCTGC+GGG + chr7_1:62761128-62761147 None:intergenic 40.0%
TCAATGTTCACGATGCTTCA+CGG - chr7_1:62761149-62761168 Msa1029320:intron 40.0%
GATTGGTACAAGTGAAGAAG+TGG + chr7_1:62761226-62761245 None:intergenic 40.0%
AGTTATGCTGACAGAGGAAA+TGG - chr7_1:62761291-62761310 Msa1029320:CDS 40.0%
TCTGGTCCTTACGATAAAGA+AGG - chr7_1:62761406-62761425 Msa1029320:CDS 40.0%
ACAGCACCTTCTTTATCGTA+AGG + chr7_1:62761415-62761434 None:intergenic 40.0%
GCTGTTATCTCTATTACAGC+AGG - chr7_1:62761430-62761449 Msa1029320:intron 40.0%
TATCTCTATTACAGCAGGTG+CGG - chr7_1:62761435-62761454 Msa1029320:intron 40.0%
! TTTTTCATTCCTAGCCCTAG+AGG - chr7_1:62761518-62761537 Msa1029320:intron 40.0%
! TAGCTGCGTGGATTTTTACT+CGG + chr7_1:62761640-62761659 None:intergenic 40.0%
AACTTCTCAGACTACACTGT+GGG + chr7_1:62761894-62761913 None:intergenic 40.0%
CAACTTACTATTTCCAGTGC+AGG - chr7_1:62762001-62762020 Msa1029320:intron 40.0%
CTTAGGATGTATGTGAGATG+GGG - chr7_1:62762041-62762060 Msa1029320:intron 40.0%
ACAGAGATACAAAACCAGAG+TGG - chr7_1:62762070-62762089 Msa1029320:intron 40.0%
AAGAGATTTCTCAACCACTC+TGG + chr7_1:62762087-62762106 None:intergenic 40.0%
AGAGTGGTTGAGAAATCTCT+TGG - chr7_1:62762086-62762105 Msa1029320:intron 40.0%
AAATCTCTTGGAGAAGAAGC+TGG - chr7_1:62762098-62762117 Msa1029320:intron 40.0%
ATAACGGCCTTCAACTTCAA+TGG + chr7_1:62762138-62762157 None:intergenic 40.0%
TATGCGTATGGGTATTTGTC+TGG - chr7_1:62762155-62762174 Msa1029320:intron 40.0%
ATGCGTATGGGTATTTGTCT+GGG - chr7_1:62762156-62762175 Msa1029320:intron 40.0%
AAGGAACACATCGCATTGTT+CGG - chr7_1:62762183-62762202 Msa1029320:intron 40.0%
TAATTCCAAAGGTCTTCGTC+AGG - chr7_1:62762217-62762236 Msa1029320:intron 40.0%
TATTACCTGACGAAGACCTT+TGG + chr7_1:62762225-62762244 None:intergenic 40.0%
TGAAATTCCAGAAGAGGACT+TGG - chr7_1:62762401-62762420 Msa1029320:intron 40.0%
AGGAGGTCAGAATGTTAACA+AGG - chr7_1:62762452-62762471 Msa1029320:intron 40.0%
CGAATTACACATATCCCAAC+TGG - chr7_1:62762489-62762508 Msa1029320:intron 40.0%
TCGTTTGAAAGCAAAGCTGT+TGG - chr7_1:62762861-62762880 Msa1029320:intron 40.0%
ACCAGATATCACCTCTGTTA+TGG - chr7_1:62763023-62763042 Msa1029320:CDS 40.0%
TCCATAACAGAGGTGATATC+TGG + chr7_1:62763027-62763046 None:intergenic 40.0%
GATATCACCTCTGTTATGGA+TGG - chr7_1:62763027-62763046 Msa1029320:CDS 40.0%
CAATTCTCCATCCATAACAG+AGG + chr7_1:62763037-62763056 None:intergenic 40.0%
CTCTGTTATGGATGGAGAAT+TGG - chr7_1:62763035-62763054 Msa1029320:CDS 40.0%
TTCCTTTACCTCCCATTCAA+TGG - chr7_1:62763130-62763149 Msa1029320:CDS 40.0%
ATCGTTCCTCTCCATTGAAT+GGG + chr7_1:62763144-62763163 None:intergenic 40.0%
TATCGTTCCTCTCCATTGAA+TGG + chr7_1:62763145-62763164 None:intergenic 40.0%
TTCAATGGAGAGGAACGATA+TGG - chr7_1:62763145-62763164 Msa1029320:exon 40.0%
ACGATATGGTTGTTGTGTCA+TGG - chr7_1:62763159-62763178 Msa1029320:five_prime_UTR 40.0%
CGATATGGTTGTTGTGTCAT+GGG - chr7_1:62763160-62763179 Msa1029320:five_prime_UTR 40.0%
GGATATGGTTAGTGGTTACG+CGG + chr7_1:62758849-62758868 None:intergenic 45.0%
GCGTAACCACTAACCATATC+CGG - chr7_1:62758848-62758867 Msa1029320:three_prime_UTR 45.0%
GCGATTCGTTTAAGTCATGG+AGG - chr7_1:62758929-62758948 Msa1029320:three_prime_UTR 45.0%
GTGGTGCGGAAAGATAAGAA+AGG + chr7_1:62759074-62759093 None:intergenic 45.0%
GGTGATAGAGGAAAAGGAGA+AGG + chr7_1:62759113-62759132 None:intergenic 45.0%
! TCTCCTTTTCCTCTATCACC+TGG - chr7_1:62759113-62759132 Msa1029320:CDS 45.0%
GTACCAGGTGATAGAGGAAA+AGG + chr7_1:62759119-62759138 None:intergenic 45.0%
GAAACAGTACCAGGTGATAG+AGG + chr7_1:62759125-62759144 None:intergenic 45.0%
! AGTAGTTCTGTTTGTGACGC+CGG - chr7_1:62759227-62759246 Msa1029320:CDS 45.0%
! ACGCTGCTCAATTGATTCTC+CGG + chr7_1:62759249-62759268 None:intergenic 45.0%
GAGAATCAATTGAGCAGCGT+TGG - chr7_1:62759249-62759268 Msa1029320:CDS 45.0%
GAATCAATTGAGCAGCGTTG+GGG - chr7_1:62759251-62759270 Msa1029320:CDS 45.0%
ATTCATACACCAACCAGAGC+CGG - chr7_1:62759420-62759439 Msa1029320:intron 45.0%
!! ATAAAATCACCGGCTCTGGT+TGG + chr7_1:62759432-62759451 None:intergenic 45.0%
CAAAACACAGGGATTCTACG+AGG + chr7_1:62759495-62759514 None:intergenic 45.0%
! GTTGGCTGACCAAGTTTTCA+AGG + chr7_1:62759651-62759670 None:intergenic 45.0%
! TTTTACGTGCACATGCACTG+AGG + chr7_1:62759933-62759952 None:intergenic 45.0%
TGTGCACGTAAAACCCTTGT+AGG - chr7_1:62759940-62759959 Msa1029320:CDS 45.0%
GTGCACGTAAAACCCTTGTA+GGG - chr7_1:62759941-62759960 Msa1029320:CDS 45.0%
GATTGAGTTTAGGAGGGGAA+TGG - chr7_1:62760117-62760136 Msa1029320:intron 45.0%
AGTTTAGGAGGGGAATGGAA+GGG - chr7_1:62760122-62760141 Msa1029320:intron 45.0%
GGATTTAGGAGGCAAAGAGA+AGG + chr7_1:62760309-62760328 None:intergenic 45.0%
GTTTGGATGGAGGATTTAGG+AGG + chr7_1:62760320-62760339 None:intergenic 45.0%
! AGAACTTGCCAAGTTGGAAG+AGG - chr7_1:62760740-62760759 Msa1029320:CDS 45.0%
AGATGCTTCCTCTTCCAACT+TGG + chr7_1:62760751-62760770 None:intergenic 45.0%
CGAAAGAGTCTGTTGAGCTT+TGG + chr7_1:62760799-62760818 None:intergenic 45.0%
ATCTTTACGGCCAGTTCGTA+AGG + chr7_1:62760987-62761006 None:intergenic 45.0%
CATGTTTATAAGTCTGCGGG+TGG + chr7_1:62761125-62761144 None:intergenic 45.0%
CACCCGCAGACTTATAAACA+TGG - chr7_1:62761123-62761142 Msa1029320:intron 45.0%
GTTTCTGCATCCTCAACCTA+AGG + chr7_1:62761268-62761287 None:intergenic 45.0%
! GAGCTGACTCAACTTCTTTC+TGG - chr7_1:62761388-62761407 Msa1029320:CDS 45.0%
ATCTCTATTACAGCAGGTGC+GGG - chr7_1:62761436-62761455 Msa1029320:intron 45.0%
ATGAGTGCACTCGTAGTATG+TGG - chr7_1:62761767-62761786 Msa1029320:intron 45.0%
TGAGTGCACTCGTAGTATGT+GGG - chr7_1:62761768-62761787 Msa1029320:intron 45.0%
CAACTTCTCAGACTACACTG+TGG + chr7_1:62761895-62761914 None:intergenic 45.0%
TACTATTTCCAGTGCAGGAC+TGG - chr7_1:62762006-62762025 Msa1029320:intron 45.0%
ACTATTTCCAGTGCAGGACT+GGG - chr7_1:62762007-62762026 Msa1029320:intron 45.0%
TCTGCCACCATTGAAGTTGA+AGG - chr7_1:62762128-62762147 Msa1029320:intron 45.0%
TTGAAGGCCGTTATGCGTAT+GGG - chr7_1:62762144-62762163 Msa1029320:intron 45.0%
TGCGTATGGGTATTTGTCTG+GGG - chr7_1:62762157-62762176 Msa1029320:intron 45.0%
CTAATCTCCAAGTCCTCTTC+TGG + chr7_1:62762411-62762430 None:intergenic 45.0%
!! GGAGATTAGCTTCTCAAGAG+CGG - chr7_1:62762422-62762441 Msa1029320:intron 45.0%
!! GAGATTAGCTTCTCAAGAGC+GGG - chr7_1:62762423-62762442 Msa1029320:intron 45.0%
GCACAAGCACAATTGCAGTT+TGG + chr7_1:62762799-62762818 None:intergenic 45.0%
CTCCATTGAATGGGAGGTAA+AGG + chr7_1:62763135-62763154 None:intergenic 45.0%
TTACCTCCCATTCAATGGAG+AGG - chr7_1:62763135-62763154 Msa1029320:exon 45.0%
!!! CTTTTTTTAAAAAAAAATTA+CGG + chr7_1:62760277-62760296 None:intergenic 5.0%
GTTAGTGGTTACGCGGTCTA+AGG + chr7_1:62758842-62758861 None:intergenic 50.0%
TGGTGTAGTAGCAGCACAGA+GGG + chr7_1:62758965-62758984 None:intergenic 50.0%
! AAAGGCTTTGGCGGTTACAG+TGG + chr7_1:62758985-62759004 None:intergenic 50.0%
CTGTAACCGCCAAAGCCTTT+CGG - chr7_1:62758985-62759004 Msa1029320:CDS 50.0%
! AGAAGACCGAAAGGCTTTGG+CGG + chr7_1:62758994-62759013 None:intergenic 50.0%
AGAAGGACGATGAGAGAGAG+TGG + chr7_1:62759096-62759115 None:intergenic 50.0%
! AATTGAGCAGCGTTGGGGAA+GGG - chr7_1:62759256-62759275 Msa1029320:CDS 50.0%
GCACATCAGACTCCCTACAA+GGG + chr7_1:62759956-62759975 None:intergenic 50.0%
TGCACATCAGACTCCCTACA+AGG + chr7_1:62759957-62759976 None:intergenic 50.0%
GAGTTTAGGAGGGGAATGGA+AGG - chr7_1:62760121-62760140 Msa1029320:intron 50.0%
CACAACACCGAGAGACTACA+GGG - chr7_1:62760364-62760383 Msa1029320:intron 50.0%
GATACTGCCCTGTAGTCTCT+CGG + chr7_1:62760374-62760393 None:intergenic 50.0%
GGAGCAAGAACTTGCCAAGT+TGG - chr7_1:62760734-62760753 Msa1029320:CDS 50.0%
! GAGTCTGTTGAGCTTTGGCT+CGG + chr7_1:62760794-62760813 None:intergenic 50.0%
! TCATGTGCCACTATGGCCTT+AGG - chr7_1:62761249-62761268 Msa1029320:CDS 50.0%
TCCTCAACCTAAGGCCATAG+TGG + chr7_1:62761259-62761278 None:intergenic 50.0%
TCTCTATTACAGCAGGTGCG+GGG - chr7_1:62761437-62761456 Msa1029320:intron 50.0%
AGAGGTGACATATAGCTGCG+TGG + chr7_1:62761652-62761671 None:intergenic 50.0%
ACGGCCTTCAACTTCAATGG+TGG + chr7_1:62762135-62762154 None:intergenic 50.0%
GTTGAAGGCCGTTATGCGTA+TGG - chr7_1:62762143-62762162 Msa1029320:intron 50.0%
GGGTATTTGTCTGGGGAGAA+AGG - chr7_1:62762164-62762183 Msa1029320:intron 50.0%
! ATTAGCTTCTCAAGAGCGGG+TGG - chr7_1:62762426-62762445 Msa1029320:intron 50.0%
TTCTCAAGAGCGGGTGGAAA+AGG - chr7_1:62762432-62762451 Msa1029320:intron 50.0%
AGCGAAGAGTGACACCAGTT+GGG + chr7_1:62762506-62762525 None:intergenic 50.0%
TCTGAAAGGGAGGCTTCACT+CGG - chr7_1:62762565-62762584 Msa1029320:intron 50.0%
CTGCAATTGTGCTTGTGCAG+AGG - chr7_1:62762801-62762820 Msa1029320:CDS 50.0%
GATTAGAGGGGACGTAGTGA+AGG - chr7_1:62762921-62762940 Msa1029320:intron 50.0%
GGACGTAGTGAAGGCTGAAT+GGG - chr7_1:62762930-62762949 Msa1029320:intron 50.0%
GACGTAGTGAAGGCTGAATG+GGG - chr7_1:62762931-62762950 Msa1029320:intron 50.0%
GTTCCTCTCCATTGAATGGG+AGG + chr7_1:62763141-62763160 None:intergenic 50.0%
GTGGTGTAGTAGCAGCACAG+AGG + chr7_1:62758966-62758985 None:intergenic 55.0%
! GATGAGAGAGAGTGGTGGTG+CGG + chr7_1:62759088-62759107 None:intergenic 55.0%
AGGACGATGAGAGAGAGTGG+TGG + chr7_1:62759093-62759112 None:intergenic 55.0%
! CAATTGAGCAGCGTTGGGGA+AGG - chr7_1:62759255-62759274 Msa1029320:CDS 55.0%
! ATTGAGCAGCGTTGGGGAAG+GGG - chr7_1:62759257-62759276 Msa1029320:CDS 55.0%
GAGGACGGTTCTGTCAATCG+TGG + chr7_1:62759914-62759933 None:intergenic 55.0%
ACGTGCACATGCACTGAGGA+CGG + chr7_1:62759929-62759948 None:intergenic 55.0%
TTAGGAGGGGAATGGAAGGG+AGG - chr7_1:62760125-62760144 Msa1029320:intron 55.0%
!! CCTGTAGTCTCTCGGTGTTG+TGG + chr7_1:62760366-62760385 None:intergenic 55.0%
CCACAACACCGAGAGACTAC+AGG - chr7_1:62760363-62760382 Msa1029320:intron 55.0%
!! TTTGGCTCGGTCGTCCCAAA+AGG + chr7_1:62760781-62760800 None:intergenic 55.0%
! GCCACTATGGCCTTAGGTTG+AGG - chr7_1:62761255-62761274 Msa1029320:CDS 55.0%
CTCTATTACAGCAGGTGCGG+GGG - chr7_1:62761438-62761457 Msa1029320:intron 55.0%
TCTATTACAGCAGGTGCGGG+GGG - chr7_1:62761439-62761458 Msa1029320:intron 55.0%
ATTTCCAGTGCAGGACTGGG+CGG - chr7_1:62762010-62762029 Msa1029320:intron 55.0%
ACTGGGCGGACATGCTTCTT+AGG - chr7_1:62762024-62762043 Msa1029320:intron 55.0%
TCAAGAGCGGGTGGAAAAGG+AGG - chr7_1:62762435-62762454 Msa1029320:intron 55.0%
CAGCGAAGAGTGACACCAGT+TGG + chr7_1:62762507-62762526 None:intergenic 55.0%
GGGACGTAGTGAAGGCTGAA+TGG - chr7_1:62762929-62762948 Msa1029320:intron 55.0%
!! GGTGTCACTCTTCGCTGCAC+AGG - chr7_1:62762510-62762529 Msa1029320:intron 60.0%
!! TGCGGGGGGTACTGATGCAC+AGG - chr7_1:62761453-62761472 Msa1029320:intron 65.0%
ATGTCCGCCCAGTCCTGCAC+TGG + chr7_1:62762017-62762036 None:intergenic 65.0%
! GAGCAGCGTTGGGGAAGGGG+AGG - chr7_1:62759260-62759279 Msa1029320:intron 70.0%
! CAGCGTTGGGGAAGGGGAGG+AGG - chr7_1:62759263-62759282 Msa1029320:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 62758799 62763298 62758799 ID=Msa1029320;Name=Msa1029320
chr7_1 mRNA 62758799 62763298 62758799 ID=Msa1029320-mRNA-1;Parent=Msa1029320;Name=Msa1029320-mRNA-1;_AED=0.04;_eAED=0.04;_QI=146|1|1|1|1|1|7|173|469
chr7_1 exon 62758799 62759276 62758799 ID=Msa1029320-mRNA-1:exon:13489;Parent=Msa1029320-mRNA-1
chr7_1 exon 62759566 62759752 62759566 ID=Msa1029320-mRNA-1:exon:13488;Parent=Msa1029320-mRNA-1
chr7_1 exon 62759859 62760074 62759859 ID=Msa1029320-mRNA-1:exon:13487;Parent=Msa1029320-mRNA-1
chr7_1 exon 62760623 62760826 62760623 ID=Msa1029320-mRNA-1:exon:13486;Parent=Msa1029320-mRNA-1
chr7_1 exon 62761225 62761445 62761225 ID=Msa1029320-mRNA-1:exon:13485;Parent=Msa1029320-mRNA-1
chr7_1 exon 62762782 62762868 62762782 ID=Msa1029320-mRNA-1:exon:13484;Parent=Msa1029320-mRNA-1
chr7_1 exon 62762963 62763298 62762963 ID=Msa1029320-mRNA-1:exon:13483;Parent=Msa1029320-mRNA-1
chr7_1 five_prime_UTR 62763153 62763298 62763153 ID=Msa1029320-mRNA-1:five_prime_utr;Parent=Msa1029320-mRNA-1
chr7_1 CDS 62762963 62763152 62762963 ID=Msa1029320-mRNA-1:cds;Parent=Msa1029320-mRNA-1
chr7_1 CDS 62762782 62762868 62762782 ID=Msa1029320-mRNA-1:cds;Parent=Msa1029320-mRNA-1
chr7_1 CDS 62761225 62761445 62761225 ID=Msa1029320-mRNA-1:cds;Parent=Msa1029320-mRNA-1
chr7_1 CDS 62760623 62760826 62760623 ID=Msa1029320-mRNA-1:cds;Parent=Msa1029320-mRNA-1
chr7_1 CDS 62759859 62760074 62759859 ID=Msa1029320-mRNA-1:cds;Parent=Msa1029320-mRNA-1
chr7_1 CDS 62759566 62759752 62759566 ID=Msa1029320-mRNA-1:cds;Parent=Msa1029320-mRNA-1
chr7_1 CDS 62758972 62759276 62758972 ID=Msa1029320-mRNA-1:cds;Parent=Msa1029320-mRNA-1
chr7_1 three_prime_UTR 62758799 62758971 62758799 ID=Msa1029320-mRNA-1:three_prime_utr;Parent=Msa1029320-mRNA-1
Gene Sequence

>Msa1029320

ATGGAGGTTGTTTCACACCCTCTGTGCTGCTACTACACCACTGTAACCGCCAAAGCCTTTCGGTCTTCTTATAAACAACCATTTCTCATTCCACAATTTTCCTCTTCTTCTTCTTCACCACATTTTCCTTTCTTATCTTTCCGCACCACCACTCTCTCTCATCGTCCTTCTCCTTTTCCTCTATCACCTGTAGTTCTGTTTGTGACGCCGGAGAATCAATTGAGCAGCGTTGGGGAAGGGGAGGAGGATACTCACACAAGTGATTCTGCACTTCAAGATTTTTATTCTCTGAGGAAGGATGTTGAAATTGCATCACAGCGTGTCAAAGAGATTAGAGAATCATCTGGTCTACAATTATTGGAGCAAGAACTTGCCAAGTTGGAAGAGGAAGCATCTTGTAGCTCCTTTTGGGACGACCGAGCCAAAGCTCAACAGACTCTTTCGACATTGGCTGATGTCAAAGAAAAGATAAAATTGCTCAATGACTACAAAACTCAGGTTGAGGATGCAGAAACAATAGTTATGCTGACAGAGGAAATGGAATCCGTTGATAAAGGGCTTTATGAAGAAGCTTCTAGTCTAATTAAAGAACTGAATAAGTCAATTGATCGGTTTGAGCTGACTCAACTTCTTTCTGGTCCTTACGATAAAGAAGGTGCTGTTATCTCTATTACAGCAGGTGCGGGGGGTACTGATGCACAGGACTGGGCGGACATGCTTCTTAGGATGTATGTGAGATGGGGTGAGAAACAGAGATACAAAACCAGAGTGGTTGAGAAATCTCTTGGAGAAGAAGCTGGAATTAAATCTGCCACCATTGAAGTTGAAGGCCGTTATGCGTATGGGTATTTGTCTGGGGAGAAAGGAACACATCGCATTGTTCGGCAATCCCCTTTTAATTCCAAAGGTCTTCGTCAGACAAGCTTTTCTGGTGTTGAAGTCATGCCTCTTCTTCCAGAAGAATCTTTGAATGTTGAAATTCCAGAAGAGGACTTGGAGATTAGCTTCTCAAGAGCGGGTGGAAAAGGAGGTCAGAATGTTAACAAGGTTGAAACTGCCGTTCGAATTACACATATCCCAACTGGTGTCACTCTTCGCTGCACAGAGGAGAGATCTCAGCTAGCAAATAAGATAAAAGCTTTAAGTCGTTTGAAAGCAAAGCTGTTGGTGATAGCTGAAGAGCAACGTGCAACTGAATTTAAACAGATTAGAGGGGACGTAGTGAAGGCTGAATGGGGACAGCAAATAAGAAATTATGTCTTCCATCCATACAAACTAGTAAAGGATGTAAGAACAGGGCATGAAACACCAGATATCACCTCTGTTATGGATGGAGAATTGGATCCCTTCATCAAATCTTACCTCAAACACAAGTATAGTATGACAATGTCTACAAGTGGGGTCAACTAA

Protein sequence

>Msa1029320

MEVVSHPLCCYYTTVTAKAFRSSYKQPFLIPQFSSSSSSPHFPFLSFRTTTLSHRPSPFPLSPVVLFVTPENQLSSVGEGEEDTHTSDSALQDFYSLRKDVEIASQRVKEIRESSGLQLLEQELAKLEEEASCSSFWDDRAKAQQTLSTLADVKEKIKLLNDYKTQVEDAETIVMLTEEMESVDKGLYEEASSLIKELNKSIDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESLNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIKALSRLKAKLLVIAEEQRATEFKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGHETPDITSVMDGELDPFIKSYLKHKYSMTMSTSGVN*