AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1121630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1121630 MtrunA17_Chr7g0249581 95.127 472 13 3 3 468 4 471 0.0 905
Msa1121630 MtrunA17_Chr1g0172361 41.989 362 203 5 93 454 62 416 1.25e-84 266
Msa1121630 MtrunA17_Chr7g0271771 40.625 352 205 2 104 454 116 464 1.41e-79 255
Msa1121630 MtrunA17_Chr7g0270701 31.445 353 221 8 116 454 49 394 4.35e-40 149
Msa1121630 MtrunA17_Chr7g0268791 31.629 313 209 4 141 452 86 394 1.81e-38 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1121630 AT5G36170.1 76.790 405 90 1 64 468 56 456 0.0 653
Msa1121630 AT5G36170.2 76.980 404 89 1 65 468 56 455 0.0 652
Msa1121630 AT5G36170.3 75.082 305 72 1 64 368 56 356 1.08e-166 475
Msa1121630 AT5G36170.4 75.329 304 71 1 65 368 56 355 1.98e-166 474
Msa1121630 AT1G56350.1 37.500 384 225 3 71 454 103 471 1.19e-77 250
Msa1121630 AT3G57190.1 35.405 370 224 6 93 460 47 403 3.07e-68 224
Msa1121630 AT3G62910.1 31.629 313 209 4 141 452 89 397 3.95e-42 155
Msa1121630 AT2G47020.4 34.711 242 153 4 215 454 95 333 4.40e-33 128
Msa1121630 AT2G47020.1 34.711 242 153 4 215 454 160 398 7.96e-33 129
Msa1121630 AT2G47020.3 31.716 268 152 4 215 454 160 424 1.58e-29 120
Msa1121630 AT2G47020.5 35.443 158 100 1 215 372 160 315 2.95e-24 103

Find 136 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTGACTCAACTTCTTTC+TGG 0.090679 7_3:+71741809 Msa1121630:CDS
CGAAGACCTTTGGAATTAAA+AGG 0.167157 7_3:-71742642 None:intergenic
ATCATCTGGTCTACAATTAT+TGG 0.231180 7_3:+71741115 Msa1121630:CDS
AAGCATCTTGTAGCTCCTTT+TGG 0.269602 7_3:+71741165 Msa1121630:CDS
TATGCGTATGGGTATTTGTC+TGG 0.283774 7_3:+71742585 Msa1121630:CDS
TTTATAAGACCTAAAGGTTT+TGG 0.285620 7_3:-71739659 None:intergenic
CTAATCTCCAAGTCCTCTTC+TGG 0.294453 7_3:-71742838 None:intergenic
ACTGGGCGGACATGCTTCTT+AGG 0.312508 7_3:+71742454 Msa1121630:CDS
TCAACATTCAAAGATTCTTC+TGG 0.317964 7_3:-71742811 None:intergenic
CTCTGTTATGGATGGAGAAT+TGG 0.333602 7_3:+71743466 Msa1121630:CDS
GAAATGGAATCCGTTGATAA+AGG 0.334721 7_3:+71741728 Msa1121630:CDS
TAAGGTTGGCTCATGTAAAA+AGG 0.345437 7_3:-71739486 None:intergenic
CTGTAACCGCCAAAACCTTT+AGG 0.353496 7_3:+71739650 Msa1121630:CDS
TCATACTATACTTGTGTTTG+AGG 0.356154 7_3:-71743508 None:intergenic
GTTAGTGGTTACGCGGTCTA+AGG 0.381092 7_3:-71739504 None:intergenic
ACATCCTTTACTAGTTTGTA+TGG 0.386451 7_3:-71743413 None:intergenic
TCCATAACAGAGGTGATATC+TGG 0.399290 7_3:-71743455 None:intergenic
AGTTATGCTGACAGAGGAAA+TGG 0.399496 7_3:+71741712 Msa1121630:CDS
ACCAGATATCACCTCTGTTA+TGG 0.400399 7_3:+71743454 Msa1121630:CDS
GGACGTAGTGAAGGCTGAAT+GGG 0.404216 7_3:+71743361 Msa1121630:CDS
TATTACCTGACGAAGACCTT+TGG 0.409680 7_3:-71742652 None:intergenic
AGAATCAATTGAGCAGCGTT+GGG 0.411480 7_3:+71739964 Msa1121630:CDS
GAAGACCTTTGGAATTAAAA+GGG 0.418012 7_3:-71742641 None:intergenic
GAAGAAGAAGAGGGAGATTG+TGG 0.418072 7_3:-71739697 None:intergenic
CGAAAGAGTCTGTTGAGCTT+TGG 0.418363 7_3:-71741198 None:intergenic
TATCGTTCCTCTCCATTGAA+TGG 0.420444 7_3:-71743573 None:intergenic
CTAGTAAAGGATGTAAGAAC+AGG 0.421372 7_3:+71743422 Msa1121630:CDS
TTCTCAAGAGCGGGTGGAAA+AGG 0.423998 7_3:+71742862 Msa1121630:CDS
ATTGAGCAGCGTTGGGGAAG+GGG 0.428787 7_3:+71739971 Msa1121630:CDS
TGAAATTCCAGAAGAGGACT+TGG 0.431477 7_3:+71742831 Msa1121630:CDS
ATGCGTATGGGTATTTGTCT+GGG 0.432886 7_3:+71742586 Msa1121630:CDS
TTTGTTCCGGATATGGTTAG+TGG 0.438705 7_3:-71739519 None:intergenic
TTCCTTTACCTCCCATTCAA+TGG 0.441158 7_3:+71743561 Msa1121630:three_prime_UTR
CAGCGTTGGGGAAGGGGAGG+AGG 0.451858 7_3:+71739977 Msa1121630:CDS
GTACCAGGTGATAGAGGAAA+AGG 0.456520 7_3:-71739778 None:intergenic
GGGACGTAGTGAAGGCTGAA+TGG 0.461610 7_3:+71743360 Msa1121630:CDS
AAATGGAATCCGTTGATAAA+GGG 0.463579 7_3:+71741729 Msa1121630:CDS
GGGTATTTGTCTGGGGAGAA+AGG 0.464816 7_3:+71742594 Msa1121630:CDS
AAATCTCTTGGAGAAGAAGC+TGG 0.467752 7_3:+71742528 Msa1121630:CDS
TTCAATGGAGAGGAACGATA+TGG 0.469674 7_3:+71743576 Msa1121630:three_prime_UTR
TAATTCCAAAGGTCTTCGTC+AGG 0.477891 7_3:+71742647 Msa1121630:CDS
TCTTAGGATGTATGTGAGAT+GGG 0.480416 7_3:+71742470 Msa1121630:CDS
ATCTCTATTACAGCAGGTGC+GGG 0.480542 7_3:+71741857 Msa1121630:CDS
AAGGAACACATCGCATTGTT+CGG 0.481188 7_3:+71742613 Msa1121630:CDS
GAGAATCAATTGAGCAGCGT+TGG 0.482723 7_3:+71739963 Msa1121630:CDS
CGAATTACACATATCCCAAC+TGG 0.485827 7_3:+71742919 Msa1121630:CDS
CTCCATTGAATGGGAGGTAA+AGG 0.485994 7_3:-71743563 None:intergenic
CCTTTACTAGTTTGTATGGA+TGG 0.486525 7_3:-71743409 None:intergenic
ATCGTTCCTCTCCATTGAAT+GGG 0.486855 7_3:-71743572 None:intergenic
AGAGTGGTTGAGAAATCTCT+TGG 0.487977 7_3:+71742516 Msa1121630:CDS
GTTGAAGGCCGTTATGCGTA+TGG 0.488122 7_3:+71742573 Msa1121630:CDS
ATGTGGTGAAGAAGAAGAAG+AGG 0.489561 7_3:-71739707 None:intergenic
GAAATAGTACCAGGTGATAG+AGG 0.498885 7_3:-71739784 None:intergenic
TGGTTGTTTATAAGACCTAA+AGG 0.499155 7_3:-71739665 None:intergenic
AGAAGGACGATGAGAGAGAG+TGG 0.500748 7_3:-71739755 None:intergenic
AGATGCTTCCTCTTCCAACT+TGG 0.503424 7_3:-71741150 None:intergenic
TCTGCCACCATCGAAGTTGA+AGG 0.503655 7_3:+71742558 Msa1121630:CDS
GAATGTTGAAATTCCAGAAG+AGG 0.507034 7_3:+71742825 Msa1121630:CDS
GAGATTAGCTTCTCAAGAGC+GGG 0.508195 7_3:+71742853 Msa1121630:CDS
TCAACAGACTCTTTCGACAT+TGG 0.508700 7_3:+71741205 Msa1121630:CDS
TTTGGCTCGGTCGTCCCAAA+AGG 0.511359 7_3:-71741180 None:intergenic
AGTAGTTCTGTTTGCGACGC+CGG 0.512771 7_3:+71739941 Msa1121630:intron
GCGTAACCACTAACCATATC+CGG 0.514074 7_3:+71739513 Msa1121630:five_prime_UTR
CGATATGGTTGTTGTGTCAT+GGG 0.519827 7_3:+71743591 Msa1121630:three_prime_UTR
GGAGCAAGAACTTGCCAAGT+TGG 0.521085 7_3:+71741136 Msa1121630:CDS
TTCATATAGCCCTTTATCAA+CGG 0.525372 7_3:-71741738 None:intergenic
GGTGTCACTCTTCGCTGCAC+AGG 0.525481 7_3:+71742940 Msa1121630:CDS
AATTGAGCAGCGTTGGGGAA+GGG 0.525505 7_3:+71739970 Msa1121630:CDS
AAAGATTCTTCTGGAAGAAG+AGG 0.527140 7_3:-71742802 None:intergenic
CAATTGAGCAGCGTTGGGGA+AGG 0.530209 7_3:+71739969 Msa1121630:CDS
AGCGAAGAGTGACACCAGTT+GGG 0.530416 7_3:-71742933 None:intergenic
CCATCCATACAAACTAGTAA+AGG 0.535045 7_3:+71743409 Msa1121630:CDS
AGAGAGATTAGAGAATCATC+TGG 0.536033 7_3:+71741101 Msa1121630:CDS
CTGAATTTAAACAGATTCGA+GGG 0.536188 7_3:+71743339 Msa1121630:CDS
GTGGTTACGCGGTCTAAGGT+TGG 0.536238 7_3:-71739500 None:intergenic
AGAACTTGCCAAGTTGGAAG+AGG 0.536733 7_3:+71741142 Msa1121630:CDS
TTTGAGGTAAGATTTGATGA+AGG 0.537806 7_3:-71743492 None:intergenic
TGCGGGAGGTACTGATGCAC+AGG 0.539451 7_3:+71741874 Msa1121630:CDS
GAAGCGATTCGTTTAAGTCA+TGG 0.539968 7_3:+71739591 Msa1121630:exon
TCTGGTCCTTACGACAAAGA+AGG 0.540896 7_3:+71741827 Msa1121630:CDS
ACGCTGCTCAATTGATTCTC+CGG 0.541033 7_3:-71739960 None:intergenic
AAGAGATTTCTCAACCACTC+TGG 0.542572 7_3:-71742514 None:intergenic
GGAGATTGTGGAATGAGAAA+TGG 0.542685 7_3:-71739685 None:intergenic
ACTGAATTTAAACAGATTCG+AGG 0.544820 7_3:+71743338 Msa1121630:CDS
TTGAGGTAAGATTTGATGAA+GGG 0.548656 7_3:-71743491 None:intergenic
GAGTCTGTTGAGCTTTGGCT+CGG 0.551498 7_3:-71741193 None:intergenic
TGTGGTGAAGAAGAAGAAGA+GGG 0.552172 7_3:-71739706 None:intergenic
ACAAGCGATTCCGCACTTCA+AGG 0.554845 7_3:+71740008 Msa1121630:CDS
ACAAATACCCATACGCATAA+CGG 0.557181 7_3:-71742581 None:intergenic
GCTGTTATCTCTATTACAGC+AGG 0.558128 7_3:+71741851 Msa1121630:CDS
CAGCGAAGAGTGACACCAGT+TGG 0.559310 7_3:-71742934 None:intergenic
TGGTGTAGTAGCAGCACAGA+GGG 0.560056 7_3:-71739627 None:intergenic
TTCTTAGGATGTATGTGAGA+TGG 0.564227 7_3:+71742469 Msa1121630:CDS
ACAGCACCTTCTTTGTCGTA+AGG 0.565785 7_3:-71741833 None:intergenic
GAGCAGCGTTGGGGAAGGGG+AGG 0.570391 7_3:+71739974 Msa1121630:CDS
AACTGAATAAGTCAATTGAT+CGG 0.574053 7_3:+71741783 Msa1121630:CDS
GATATCACCTCTGTTATGGA+TGG 0.574268 7_3:+71743458 Msa1121630:CDS
ACGATATGGTTGTTGTGTCA+TGG 0.576481 7_3:+71743590 Msa1121630:three_prime_UTR
TTGAAGGCCGTTATGCGTAT+GGG 0.580211 7_3:+71742574 Msa1121630:CDS
AAGACCTTTGGAATTAAAAG+GGG 0.580978 7_3:-71742640 None:intergenic
ACAAAATAACTTACGCACGC+AGG 0.583163 7_3:+71739537 Msa1121630:five_prime_UTR
GGTGATAGAGGAAAAGGAGA+AGG 0.593572 7_3:-71739772 None:intergenic
GATTCGAGGGGACGTAGTGA+AGG 0.600180 7_3:+71743352 Msa1121630:CDS
TGCGTATGGGTATTTGTCTG+GGG 0.601450 7_3:+71742587 Msa1121630:CDS
GGAGATTAGCTTCTCAAGAG+CGG 0.603522 7_3:+71742852 Msa1121630:CDS
AGTATGACAATGTCTACAAG+TGG 0.605383 7_3:+71743524 Msa1121630:CDS
TCAAGAGCGGGTGGAAAAGG+AGG 0.611511 7_3:+71742865 Msa1121630:CDS
TATCTCTATTACAGCAGGTG+CGG 0.613713 7_3:+71741856 Msa1121630:CDS
ATAACGGCCTTCAACTTCGA+TGG 0.618031 7_3:-71742565 None:intergenic
TTACCTCCCATTCAATGGAG+AGG 0.623862 7_3:+71743566 Msa1121630:three_prime_UTR
TGGGATATGTGTAATTCGAA+CGG 0.626225 7_3:-71742914 None:intergenic
TCGTTTGAAAGCGAAGCTGT+TGG 0.632187 7_3:+71743292 Msa1121630:CDS
ATTAGCTTCTCAAGAGCGGG+TGG 0.632510 7_3:+71742856 Msa1121630:CDS
AGGAGGTCAGAATGTTAACA+AGG 0.634298 7_3:+71742882 Msa1121630:CDS
GATGAGAGAGAGTGGTGGTG+CGG 0.635635 7_3:-71739747 None:intergenic
GTATGACAATGTCTACAAGT+GGG 0.640154 7_3:+71743525 Msa1121630:CDS
GTTCCTCTCCATTGAATGGG+AGG 0.640753 7_3:-71743569 None:intergenic
ACGGCCTTCAACTTCGATGG+TGG 0.641189 7_3:-71742562 None:intergenic
AAAGATAAGAAAGGAAGATG+TGG 0.642027 7_3:-71739724 None:intergenic
GAATCAATTGAGCAGCGTTG+GGG 0.643618 7_3:+71739965 Msa1121630:CDS
GACGTAGTGAAGGCTGAATG+GGG 0.649092 7_3:+71743362 Msa1121630:CDS
GTGGTGCGGAAAGATAAGAA+AGG 0.652461 7_3:-71739733 None:intergenic
TCTATTACAGCAGGTGCGGG+AGG 0.657478 7_3:+71741860 Msa1121630:CDS
AACAATAGTTATGCTGACAG+AGG 0.660154 7_3:+71741706 Msa1121630:CDS
GCGATTCGTTTAAGTCATGG+AGG 0.672836 7_3:+71739594 Msa1121630:exon
TGAATTTAAACAGATTCGAG+GGG 0.676303 7_3:+71743340 Msa1121630:CDS
AGGACGATGAGAGAGAGTGG+TGG 0.676872 7_3:-71739752 None:intergenic
CAAGCAGTTACCTTGAAGTG+CGG 0.679223 7_3:-71740018 None:intergenic
TAGTAAAGGATGTAAGAACA+GGG 0.680485 7_3:+71743423 Msa1121630:CDS
CAATTCTCCATCCATAACAG+AGG 0.681172 7_3:-71743465 None:intergenic
TATGACAATGTCTACAAGTG+GGG 0.682661 7_3:+71743526 Msa1121630:CDS
CTTAGGATGTATGTGAGATG+GGG 0.691263 7_3:+71742471 Msa1121630:CDS
ATTTCCAGTGCAGGACTGGG+CGG 0.700162 7_3:+71742440 Msa1121630:intron
GTGGTGTAGTAGCAGCACAG+AGG 0.714809 7_3:-71739628 None:intergenic
GGATATGGTTAGTGGTTACG+CGG 0.719332 7_3:-71739511 None:intergenic
ACAGAGATACAAAACCAGAG+TGG 0.753790 7_3:+71742500 Msa1121630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAATATATAAAGTG+TGG + chr7_3:71740587-71740606 Msa1121630:intron 10.0%
!!! GTATATTTTTTTTGTGTTAA+TGG + chr7_3:71739911-71739930 Msa1121630:intron 15.0%
!!! TGATATTAGTATTTAGAATA+AGG + chr7_3:71740145-71740164 Msa1121630:intron 15.0%
!! AATTGATACAATAAAACATT+TGG - chr7_3:71740451-71740470 None:intergenic 15.0%
!!! TACTTTTCTTTTTTAAATCA+CGG + chr7_3:71740549-71740568 Msa1121630:intron 15.0%
!! ATCTATACTCATAAATAAAT+TGG + chr7_3:71741334-71741353 Msa1121630:intron 15.0%
!!! TTTTTGTTTCTAAATCTTTA+CGG - chr7_3:71741403-71741422 None:intergenic 15.0%
!! TTAGAAACAAAAATTAATGA+AGG + chr7_3:71741410-71741429 Msa1121630:intron 15.0%
!! TTATTGTCTGATATATTATA+CGG + chr7_3:71741970-71741989 Msa1121630:intron 15.0%
!! CTGTTCAAATAATAAAATAT+GGG - chr7_3:71742755-71742774 None:intergenic 15.0%
!! TCTGTTCAAATAATAAAATA+TGG - chr7_3:71742756-71742775 None:intergenic 15.0%
!!! TTTATTTTTTTTGCCAACTA+TGG + chr7_3:71740469-71740488 Msa1121630:intron 20.0%
!!! TTATTTTTTTTGCCAACTAT+GGG + chr7_3:71740470-71740489 Msa1121630:intron 20.0%
!! GAAAATAAAATGCAATCATT+TGG - chr7_3:71740831-71740850 None:intergenic 20.0%
!! TTCTTTAGATTTAAGTCATT+TGG + chr7_3:71740894-71740913 Msa1121630:intron 20.0%
!! ATGAAAAAACAAGTTCATTA+TGG - chr7_3:71741927-71741946 None:intergenic 20.0%
!!! CAATAAATTTTTTACCTCTA+GGG - chr7_3:71741956-71741975 None:intergenic 20.0%
!!! ACAATAAATTTTTTACCTCT+AGG - chr7_3:71741957-71741976 None:intergenic 20.0%
!! TATTGTCTGATATATTATAC+GGG + chr7_3:71741971-71741990 Msa1121630:intron 20.0%
!!! ACATGACTATTTTTTAGAAA+TGG - chr7_3:71742244-71742263 None:intergenic 20.0%
!!! TTTCTAAAAAATAGTCATGT+TGG + chr7_3:71742244-71742263 Msa1121630:intron 20.0%
!! TTTATAAGACCTAAAGGTTT+TGG - chr7_3:71739662-71739681 None:intergenic 25.0%
! AATAGAATAGAAATAGTACC+AGG - chr7_3:71739796-71739815 None:intergenic 25.0%
! TGAAGTAGTAAATATGAGAA+TGG - chr7_3:71739825-71739844 None:intergenic 25.0%
! GTATAATTCAGACAAAATTG+TGG + chr7_3:71740082-71740101 Msa1121630:intron 25.0%
! TACTAATATCATAACATCAC+CGG - chr7_3:71740136-71740155 None:intergenic 25.0%
!!! ATTTTAAAGCTGAAAGTCAA+GGG - chr7_3:71740393-71740412 None:intergenic 25.0%
!!! TATTTTAAAGCTGAAAGTCA+AGG - chr7_3:71740394-71740413 None:intergenic 25.0%
!!! TATTTTTTTTGCCAACTATG+GGG + chr7_3:71740471-71740490 Msa1121630:intron 25.0%
! ATATACTGCATCATAATGTA+TGG + chr7_3:71740951-71740970 Msa1121630:intron 25.0%
! TATACTGCATCATAATGTAT+GGG + chr7_3:71740952-71740971 Msa1121630:intron 25.0%
! ATAGTCACTAAAATCAATTC+CGG + chr7_3:71740991-71741010 Msa1121630:intron 25.0%
! TACTTCAAAACAAACTAATC+CGG - chr7_3:71741013-71741032 None:intergenic 25.0%
!! ACAAATCTATCTCTCTTTTA+AGG + chr7_3:71741584-71741603 Msa1121630:intron 25.0%
! AACTGAATAAGTCAATTGAT+CGG + chr7_3:71741783-71741802 Msa1121630:CDS 25.0%
!!! AGATAAATTCTAGTTTTTCC+TGG - chr7_3:71742025-71742044 None:intergenic 25.0%
! GAAAAAAAAACAACATAGCA+AGG - chr7_3:71742272-71742291 None:intergenic 25.0%
!! TTTTCTATTTGCGTTTTTCT+TGG + chr7_3:71742370-71742389 Msa1121630:intron 25.0%
!!! TTTGTGCATTTGATAATGAA+AGG - chr7_3:71742717-71742736 None:intergenic 25.0%
!!! TCTGTTTTTATTCTTCTGAA+AGG + chr7_3:71742981-71743000 Msa1121630:intron 25.0%
!!! CTGTTTTTATTCTTCTGAAA+GGG + chr7_3:71742982-71743001 Msa1121630:intron 25.0%
!!! CATTTCAAATTGAGTTGATA+AGG - chr7_3:71743040-71743059 None:intergenic 25.0%
! TAGTGATAAAAAGTAGTTTG+TGG + chr7_3:71743703-71743722 Msa1121630:three_prime_UTR 25.0%
!! AAGTTATTTTGTTCCGGATA+TGG - chr7_3:71739529-71739548 None:intergenic 30.0%
TGGTTGTTTATAAGACCTAA+AGG - chr7_3:71739668-71739687 None:intergenic 30.0%
AAAGATAAGAAAGGAAGATG+TGG - chr7_3:71739727-71739746 None:intergenic 30.0%
!! ATATTGATTCGTTCACATTC+TGG - chr7_3:71740188-71740207 None:intergenic 30.0%
CTGATGTGCATAATTTAAAG+CGG + chr7_3:71740367-71740386 Msa1121630:intron 30.0%
GAATAAGTAGATTTGCACAT+TGG + chr7_3:71740856-71740875 Msa1121630:intron 30.0%
GCAGTATATGCTTATACAAA+AGG - chr7_3:71740940-71740959 None:intergenic 30.0%
ATACTGCATCATAATGTATG+GGG + chr7_3:71740953-71740972 Msa1121630:intron 30.0%
!!! GTTTGTTTTGAAGTATCACT+CGG + chr7_3:71741018-71741037 Msa1121630:intron 30.0%
! TTGCAGATTTTTATTCTCTG+AGG + chr7_3:71741048-71741067 Msa1121630:intron 30.0%
!! AGATTTTTATTCTCTGAGGA+AGG + chr7_3:71741052-71741071 Msa1121630:intron 30.0%
ATCATCTGGTCTACAATTAT+TGG + chr7_3:71741115-71741134 Msa1121630:CDS 30.0%
GTATAGATATTACTGCATGT+CGG - chr7_3:71741322-71741341 None:intergenic 30.0%
! CTTTTAAATGCCTTAAGAAC+TGG + chr7_3:71741377-71741396 Msa1121630:intron 30.0%
ACCTACATTCATTGTAATGA+AGG - chr7_3:71741674-71741693 None:intergenic 30.0%
ATTACAATGAATGTAGGTTG+AGG + chr7_3:71741676-71741695 Msa1121630:intron 30.0%
! AAATGGAATCCGTTGATAAA+GGG + chr7_3:71741729-71741748 Msa1121630:CDS 30.0%
TTCATATAGCCCTTTATCAA+CGG - chr7_3:71741741-71741760 None:intergenic 30.0%
!!! AATTTTTTACCTCTAGGGAT+AGG - chr7_3:71741951-71741970 None:intergenic 30.0%
GATATATTATACGGGTAGAA+CGG + chr7_3:71741979-71741998 Msa1121630:intron 30.0%
TTAAAAATGTTGAGACAGAG+AGG - chr7_3:71742091-71742110 None:intergenic 30.0%
! CAACATTTTTAAACTTCTCC+AGG + chr7_3:71742099-71742118 Msa1121630:intron 30.0%
CTGTCATAAGCATTTAAATC+TGG + chr7_3:71742165-71742184 Msa1121630:intron 30.0%
!! AAGACCTTTGGAATTAAAAG+GGG - chr7_3:71742643-71742662 None:intergenic 30.0%
!! GAAGACCTTTGGAATTAAAA+GGG - chr7_3:71742644-71742663 None:intergenic 30.0%
!!! TAATAACCAGCTTTTTTGGT+TGG + chr7_3:71742670-71742689 Msa1121630:intron 30.0%
TCAACATTCAAAGATTCTTC+TGG - chr7_3:71742814-71742833 None:intergenic 30.0%
GAAGAATAAAAACAGAGCAA+AGG - chr7_3:71742977-71742996 None:intergenic 30.0%
!! TTTTTATTCTTCTGAAAGGG+AGG + chr7_3:71742985-71743004 Msa1121630:intron 30.0%
GATTTAATAACCTTCTCTAC+AGG + chr7_3:71743061-71743080 Msa1121630:intron 30.0%
GTGTTAGCATGAATCTAATT+CGG + chr7_3:71743173-71743192 Msa1121630:intron 30.0%
ACTGAATTTAAACAGATTCG+AGG + chr7_3:71743338-71743357 Msa1121630:CDS 30.0%
CTGAATTTAAACAGATTCGA+GGG + chr7_3:71743339-71743358 Msa1121630:CDS 30.0%
TGAATTTAAACAGATTCGAG+GGG + chr7_3:71743340-71743359 Msa1121630:CDS 30.0%
! ACATCCTTTACTAGTTTGTA+TGG - chr7_3:71743416-71743435 None:intergenic 30.0%
TAGTAAAGGATGTAAGAACA+GGG + chr7_3:71743423-71743442 Msa1121630:CDS 30.0%
TTGAGGTAAGATTTGATGAA+GGG - chr7_3:71743494-71743513 None:intergenic 30.0%
! TTTGAGGTAAGATTTGATGA+AGG - chr7_3:71743495-71743514 None:intergenic 30.0%
TCATACTATACTTGTGTTTG+AGG - chr7_3:71743511-71743530 None:intergenic 30.0%
GCTCATGTAAAAAGGTTGTT+TGG - chr7_3:71739481-71739500 None:intergenic 35.0%
! TAAGGTTGGCTCATGTAAAA+AGG - chr7_3:71739489-71739508 None:intergenic 35.0%
!! GTGCGTAAGTTATTTTGTTC+CGG - chr7_3:71739535-71739554 None:intergenic 35.0%
!! ATAAGACCTAAAGGTTTTGG+CGG - chr7_3:71739659-71739678 None:intergenic 35.0%
ATTCATACACCAATCATAGC+CGG + chr7_3:71740114-71740133 Msa1121630:intron 35.0%
TTGTACTGAACAGTGTATTG+CGG - chr7_3:71740215-71740234 None:intergenic 35.0%
TTAAAATACGTCGTCATGAC+TGG + chr7_3:71740406-71740425 Msa1121630:intron 35.0%
TGTTTGGATTGAGTTTAGGA+GGG + chr7_3:71740509-71740528 Msa1121630:intron 35.0%
ACACCCTTAAGGAATGATAT+AGG + chr7_3:71740736-71740755 Msa1121630:intron 35.0%
TGGCCTATATCATTCCTTAA+GGG - chr7_3:71740742-71740761 None:intergenic 35.0%
TACAAAAGGAAGAGAGAAAC+AGG - chr7_3:71740926-71740945 None:intergenic 35.0%
AGAGAGATTAGAGAATCATC+TGG + chr7_3:71741101-71741120 Msa1121630:CDS 35.0%
GCTCAATGACTACAAAAATC+AGG + chr7_3:71741253-71741272 Msa1121630:CDS 35.0%
CTTTCTTGCACTTAATTAGC+AGG - chr7_3:71741471-71741490 None:intergenic 35.0%
TAGCCATGTTTATAAGTCTG+CGG - chr7_3:71741534-71741553 None:intergenic 35.0%
GATTGGTATAAGTGAAGAAG+TGG - chr7_3:71741632-71741651 None:intergenic 35.0%
ATAGTGGCACATGATTAGAT+TGG - chr7_3:71741649-71741668 None:intergenic 35.0%
! AATCTAATCATGTGCCACTA+TGG + chr7_3:71741648-71741667 Msa1121630:intron 35.0%
GCCTTCATTACAATGAATGT+AGG + chr7_3:71741670-71741689 Msa1121630:intron 35.0%
AACAATAGTTATGCTGACAG+AGG + chr7_3:71741706-71741725 Msa1121630:CDS 35.0%
! GAAATGGAATCCGTTGATAA+AGG + chr7_3:71741728-71741747 Msa1121630:CDS 35.0%
GTAAATAGCTATCCATGTAC+AGG + chr7_3:71741896-71741915 Msa1121630:intron 35.0%
ATTATGGTAACACCTGTACA+TGG - chr7_3:71741911-71741930 None:intergenic 35.0%
! TTTTTCATTCCTATCCCTAG+AGG + chr7_3:71741939-71741958 Msa1121630:intron 35.0%
TGAACAAATTTCAGAAAGCC+TGG - chr7_3:71742120-71742139 None:intergenic 35.0%
CTTGGAATATGAGTACTTTG+TGG + chr7_3:71742388-71742407 Msa1121630:intron 35.0%
TTCTTAGGATGTATGTGAGA+TGG + chr7_3:71742469-71742488 Msa1121630:CDS 35.0%
TCTTAGGATGTATGTGAGAT+GGG + chr7_3:71742470-71742489 Msa1121630:CDS 35.0%
ACAAATACCCATACGCATAA+CGG - chr7_3:71742584-71742603 None:intergenic 35.0%
!! CAATCCCCTTTTAATTCCAA+AGG + chr7_3:71742636-71742655 Msa1121630:CDS 35.0%
!! CGAAGACCTTTGGAATTAAA+AGG - chr7_3:71742645-71742664 None:intergenic 35.0%
!!! CAGGTAATAACCAGCTTTTT+TGG + chr7_3:71742666-71742685 Msa1121630:intron 35.0%
! TTTGAACAGACAAGCTTTTC+TGG + chr7_3:71742766-71742785 Msa1121630:intron 35.0%
! AAAGATTCTTCTGGAAGAAG+AGG - chr7_3:71742805-71742824 None:intergenic 35.0%
GAATGTTGAAATTCCAGAAG+AGG + chr7_3:71742825-71742844 Msa1121630:CDS 35.0%
TGGGATATGTGTAATTCGAA+CGG - chr7_3:71742917-71742936 None:intergenic 35.0%
ATAACAGAAACCTGTAGAGA+AGG - chr7_3:71743074-71743093 None:intergenic 35.0%
TCATGCTAACACAAAAGAAG+TGG - chr7_3:71743165-71743184 None:intergenic 35.0%
! CCTTTACTAGTTTGTATGGA+TGG - chr7_3:71743412-71743431 None:intergenic 35.0%
CCATCCATACAAACTAGTAA+AGG + chr7_3:71743409-71743428 Msa1121630:CDS 35.0%
CTAGTAAAGGATGTAAGAAC+AGG + chr7_3:71743422-71743441 Msa1121630:CDS 35.0%
AGTATGACAATGTCTACAAG+TGG + chr7_3:71743524-71743543 Msa1121630:CDS 35.0%
GTATGACAATGTCTACAAGT+GGG + chr7_3:71743525-71743544 Msa1121630:CDS 35.0%
TATGACAATGTCTACAAGTG+GGG + chr7_3:71743526-71743545 Msa1121630:CDS 35.0%
TTTGTTCCGGATATGGTTAG+TGG - chr7_3:71739522-71739541 None:intergenic 40.0%
ACAAAATAACTTACGCACGC+AGG + chr7_3:71739537-71739556 Msa1121630:five_prime_UTR 40.0%
GAAGCGATTCGTTTAAGTCA+TGG + chr7_3:71739591-71739610 Msa1121630:exon 40.0%
GGAGATTGTGGAATGAGAAA+TGG - chr7_3:71739688-71739707 None:intergenic 40.0%
TGTGGTGAAGAAGAAGAAGA+GGG - chr7_3:71739709-71739728 None:intergenic 40.0%
ATGTGGTGAAGAAGAAGAAG+AGG - chr7_3:71739710-71739729 None:intergenic 40.0%
GAAATAGTACCAGGTGATAG+AGG - chr7_3:71739787-71739806 None:intergenic 40.0%
AGAATCAATTGAGCAGCGTT+GGG + chr7_3:71739964-71739983 Msa1121630:CDS 40.0%
! ATAACATCACCGGCTATGAT+TGG - chr7_3:71740126-71740145 None:intergenic 40.0%
GGTGTGTTTGGATTGAGTTT+AGG + chr7_3:71740505-71740524 Msa1121630:intron 40.0%
GTGTTTGGATTGAGTTTAGG+AGG + chr7_3:71740508-71740527 Msa1121630:intron 40.0%
GTTTGGATTGAGTTTAGGAG+GGG + chr7_3:71740510-71740529 Msa1121630:intron 40.0%
GATTTAGGAGGCAAAGAGAA+GGG - chr7_3:71740704-71740723 None:intergenic 40.0%
TGTGTTTGGATGGAGGATTT+AGG - chr7_3:71740719-71740738 None:intergenic 40.0%
! TCATTCCTTAAGGGTGTGTT+TGG - chr7_3:71740733-71740752 None:intergenic 40.0%
GTGGCCTATATCATTCCTTA+AGG - chr7_3:71740743-71740762 None:intergenic 40.0%
!! TGCACATTGGTGTTATCATG+AGG + chr7_3:71740869-71740888 Msa1121630:intron 40.0%
GTATGGGGTGAATCAATTAG+AGG + chr7_3:71740968-71740987 Msa1121630:intron 40.0%
! AAGCATCTTGTAGCTCCTTT+TGG + chr7_3:71741165-71741184 Msa1121630:CDS 40.0%
! AGCATCTTGTAGCTCCTTTT+GGG + chr7_3:71741166-71741185 Msa1121630:CDS 40.0%
TCAACAGACTCTTTCGACAT+TGG + chr7_3:71741205-71741224 Msa1121630:CDS 40.0%
ATCTTTACGGCCAGTTCTTA+AGG - chr7_3:71741390-71741409 None:intergenic 40.0%
!!! TGCGGGTGGCTATTTTTATT+TGG - chr7_3:71741516-71741535 None:intergenic 40.0%
AGCCATGTTTATAAGTCTGC+GGG - chr7_3:71741533-71741552 None:intergenic 40.0%
!! GATAGATTTGTTGTACACCG+TGG - chr7_3:71741575-71741594 None:intergenic 40.0%
CATTGTAATGAAGGCCATAG+TGG - chr7_3:71741665-71741684 None:intergenic 40.0%
AGTTATGCTGACAGAGGAAA+TGG + chr7_3:71741712-71741731 Msa1121630:CDS 40.0%
GCTGTTATCTCTATTACAGC+AGG + chr7_3:71741851-71741870 Msa1121630:CDS 40.0%
TATCTCTATTACAGCAGGTG+CGG + chr7_3:71741856-71741875 Msa1121630:CDS 40.0%
ATATTATACGGGTAGAACGG+AGG + chr7_3:71741982-71742001 Msa1121630:intron 40.0%
GAACTTGTAAGTTGTATGCC+AGG + chr7_3:71742004-71742023 Msa1121630:intron 40.0%
! AGCTGCGTGAATTTTTACTC+AGG - chr7_3:71742060-71742079 None:intergenic 40.0%
ATGAGTGCACTTGTAGTATG+TGG + chr7_3:71742188-71742207 Msa1121630:intron 40.0%
TGAGTGCACTTGTAGTATGT+GGG + chr7_3:71742189-71742208 Msa1121630:intron 40.0%
CAACTTACTATTTCCAGTGC+AGG + chr7_3:71742431-71742450 Msa1121630:intron 40.0%
CTTAGGATGTATGTGAGATG+GGG + chr7_3:71742471-71742490 Msa1121630:CDS 40.0%
ACAGAGATACAAAACCAGAG+TGG + chr7_3:71742500-71742519 Msa1121630:CDS 40.0%
AAGAGATTTCTCAACCACTC+TGG - chr7_3:71742517-71742536 None:intergenic 40.0%
AGAGTGGTTGAGAAATCTCT+TGG + chr7_3:71742516-71742535 Msa1121630:CDS 40.0%
AAATCTCTTGGAGAAGAAGC+TGG + chr7_3:71742528-71742547 Msa1121630:CDS 40.0%
TATGCGTATGGGTATTTGTC+TGG + chr7_3:71742585-71742604 Msa1121630:CDS 40.0%
ATGCGTATGGGTATTTGTCT+GGG + chr7_3:71742586-71742605 Msa1121630:CDS 40.0%
AAGGAACACATCGCATTGTT+CGG + chr7_3:71742613-71742632 Msa1121630:CDS 40.0%
TAATTCCAAAGGTCTTCGTC+AGG + chr7_3:71742647-71742666 Msa1121630:CDS 40.0%
TATTACCTGACGAAGACCTT+TGG - chr7_3:71742655-71742674 None:intergenic 40.0%
ATTCAGCCAACCAAAAAAGC+TGG - chr7_3:71742679-71742698 None:intergenic 40.0%
TGAAATTCCAGAAGAGGACT+TGG + chr7_3:71742831-71742850 Msa1121630:CDS 40.0%
AGGAGGTCAGAATGTTAACA+AGG + chr7_3:71742882-71742901 Msa1121630:CDS 40.0%
CGAATTACACATATCCCAAC+TGG + chr7_3:71742919-71742938 Msa1121630:CDS 40.0%
ACCAGATATCACCTCTGTTA+TGG + chr7_3:71743454-71743473 Msa1121630:CDS 40.0%
TCCATAACAGAGGTGATATC+TGG - chr7_3:71743458-71743477 None:intergenic 40.0%
GATATCACCTCTGTTATGGA+TGG + chr7_3:71743458-71743477 Msa1121630:CDS 40.0%
CAATTCTCCATCCATAACAG+AGG - chr7_3:71743468-71743487 None:intergenic 40.0%
CTCTGTTATGGATGGAGAAT+TGG + chr7_3:71743466-71743485 Msa1121630:CDS 40.0%
TTCCTTTACCTCCCATTCAA+TGG + chr7_3:71743561-71743580 Msa1121630:three_prime_UTR 40.0%
ATCGTTCCTCTCCATTGAAT+GGG - chr7_3:71743575-71743594 None:intergenic 40.0%
TATCGTTCCTCTCCATTGAA+TGG - chr7_3:71743576-71743595 None:intergenic 40.0%
TTCAATGGAGAGGAACGATA+TGG + chr7_3:71743576-71743595 Msa1121630:three_prime_UTR 40.0%
ACGATATGGTTGTTGTGTCA+TGG + chr7_3:71743590-71743609 Msa1121630:three_prime_UTR 40.0%
CGATATGGTTGTTGTGTCAT+GGG + chr7_3:71743591-71743610 Msa1121630:three_prime_UTR 40.0%
GGATATGGTTAGTGGTTACG+CGG - chr7_3:71739514-71739533 None:intergenic 45.0%
GCGTAACCACTAACCATATC+CGG + chr7_3:71739513-71739532 Msa1121630:five_prime_UTR 45.0%
GCGATTCGTTTAAGTCATGG+AGG + chr7_3:71739594-71739613 Msa1121630:exon 45.0%
!! AAAGGTTTTGGCGGTTACAG+TGG - chr7_3:71739650-71739669 None:intergenic 45.0%
CTGTAACCGCCAAAACCTTT+AGG + chr7_3:71739650-71739669 Msa1121630:CDS 45.0%
GAAGAAGAAGAGGGAGATTG+TGG - chr7_3:71739700-71739719 None:intergenic 45.0%
GTGGTGCGGAAAGATAAGAA+AGG - chr7_3:71739736-71739755 None:intergenic 45.0%
GGTGATAGAGGAAAAGGAGA+AGG - chr7_3:71739775-71739794 None:intergenic 45.0%
! TCTCCTTTTCCTCTATCACC+TGG + chr7_3:71739775-71739794 Msa1121630:CDS 45.0%
GTACCAGGTGATAGAGGAAA+AGG - chr7_3:71739781-71739800 None:intergenic 45.0%
! ACGCTGCTCAATTGATTCTC+CGG - chr7_3:71739963-71739982 None:intergenic 45.0%
GAGAATCAATTGAGCAGCGT+TGG + chr7_3:71739963-71739982 Msa1121630:CDS 45.0%
GAATCAATTGAGCAGCGTTG+GGG + chr7_3:71739965-71739984 Msa1121630:CDS 45.0%
CAAGCAGTTACCTTGAAGTG+CGG - chr7_3:71740021-71740040 None:intergenic 45.0%
GTGCACGTAAAACCCTTGTA+GGG + chr7_3:71740341-71740360 Msa1121630:intron 45.0%
!! AACTATGGGGAAGCACTCAA+GGG + chr7_3:71740484-71740503 Msa1121630:intron 45.0%
GATTGAGTTTAGGAGGGGAA+TGG + chr7_3:71740515-71740534 Msa1121630:intron 45.0%
AGTTTAGGAGGGGAATGGAA+GGG + chr7_3:71740520-71740539 Msa1121630:intron 45.0%
GGATTTAGGAGGCAAAGAGA+AGG - chr7_3:71740705-71740724 None:intergenic 45.0%
GTTTGGATGGAGGATTTAGG+AGG - chr7_3:71740716-71740735 None:intergenic 45.0%
! TTAAGGGTGTGTTTGGATGG+AGG - chr7_3:71740726-71740745 None:intergenic 45.0%
TCCATCCAAACACACCCTTA+AGG + chr7_3:71740725-71740744 Msa1121630:intron 45.0%
! TCCTTAAGGGTGTGTTTGGA+TGG - chr7_3:71740729-71740748 None:intergenic 45.0%
! AGAACTTGCCAAGTTGGAAG+AGG + chr7_3:71741142-71741161 Msa1121630:CDS 45.0%
AGATGCTTCCTCTTCCAACT+TGG - chr7_3:71741153-71741172 None:intergenic 45.0%
CGAAAGAGTCTGTTGAGCTT+TGG - chr7_3:71741201-71741220 None:intergenic 45.0%
CATGTTTATAAGTCTGCGGG+TGG - chr7_3:71741530-71741549 None:intergenic 45.0%
CACCCGCAGACTTATAAACA+TGG + chr7_3:71741528-71741547 Msa1121630:intron 45.0%
CAATGTTCACGATGCTTCCA+CGG + chr7_3:71741555-71741574 Msa1121630:intron 45.0%
! GAGCTGACTCAACTTCTTTC+TGG + chr7_3:71741809-71741828 Msa1121630:CDS 45.0%
TCTGGTCCTTACGACAAAGA+AGG + chr7_3:71741827-71741846 Msa1121630:CDS 45.0%
ACAGCACCTTCTTTGTCGTA+AGG - chr7_3:71741836-71741855 None:intergenic 45.0%
ATCTCTATTACAGCAGGTGC+GGG + chr7_3:71741857-71741876 Msa1121630:CDS 45.0%
GTTCATAGCCACATGTGTAC+TGG + chr7_3:71742135-71742154 Msa1121630:intron 45.0%
GTTACTTGCCAGTACACATG+TGG - chr7_3:71742146-71742165 None:intergenic 45.0%
ACTTCTCAGACTACACAGTG+CGG - chr7_3:71742323-71742342 None:intergenic 45.0%
TACTATTTCCAGTGCAGGAC+TGG + chr7_3:71742436-71742455 Msa1121630:intron 45.0%
ACTATTTCCAGTGCAGGACT+GGG + chr7_3:71742437-71742456 Msa1121630:intron 45.0%
ATAACGGCCTTCAACTTCGA+TGG - chr7_3:71742568-71742587 None:intergenic 45.0%
TTGAAGGCCGTTATGCGTAT+GGG + chr7_3:71742574-71742593 Msa1121630:CDS 45.0%
TGCGTATGGGTATTTGTCTG+GGG + chr7_3:71742587-71742606 Msa1121630:CDS 45.0%
CTAATCTCCAAGTCCTCTTC+TGG - chr7_3:71742841-71742860 None:intergenic 45.0%
!! GGAGATTAGCTTCTCAAGAG+CGG + chr7_3:71742852-71742871 Msa1121630:CDS 45.0%
!! GAGATTAGCTTCTCAAGAGC+GGG + chr7_3:71742853-71742872 Msa1121630:CDS 45.0%
TCGTTTGAAAGCGAAGCTGT+TGG + chr7_3:71743292-71743311 Msa1121630:CDS 45.0%
CTCCATTGAATGGGAGGTAA+AGG - chr7_3:71743566-71743585 None:intergenic 45.0%
TTACCTCCCATTCAATGGAG+AGG + chr7_3:71743566-71743585 Msa1121630:three_prime_UTR 45.0%
!!! TTACTTTTTTTTTAAAATTA+AGG - chr7_3:71740676-71740695 None:intergenic 5.0%
!!! ATATAATTATGAAATATTTT+AGG + chr7_3:71741280-71741299 Msa1121630:intron 5.0%
GTTAGTGGTTACGCGGTCTA+AGG - chr7_3:71739507-71739526 None:intergenic 50.0%
TGGTGTAGTAGCAGCACAGA+GGG - chr7_3:71739630-71739649 None:intergenic 50.0%
AGAAGGACGATGAGAGAGAG+TGG - chr7_3:71739758-71739777 None:intergenic 50.0%
! AGTAGTTCTGTTTGCGACGC+CGG + chr7_3:71739941-71739960 Msa1121630:intron 50.0%
! AATTGAGCAGCGTTGGGGAA+GGG + chr7_3:71739970-71739989 Msa1121630:CDS 50.0%
ACAAGCGATTCCGCACTTCA+AGG + chr7_3:71740008-71740027 Msa1121630:CDS 50.0%
CGTGCACGTAAAACCCTTGT+AGG + chr7_3:71740340-71740359 Msa1121630:intron 50.0%
GCACATCAGACTCCCTACAA+GGG - chr7_3:71740356-71740375 None:intergenic 50.0%
TGCACATCAGACTCCCTACA+AGG - chr7_3:71740357-71740376 None:intergenic 50.0%
CTTGAGTGCTTCCCCATAGT+TGG - chr7_3:71740485-71740504 None:intergenic 50.0%
!! CAACTATGGGGAAGCACTCA+AGG + chr7_3:71740483-71740502 Msa1121630:intron 50.0%
! GAAGCACTCAAGGGTGTGTT+TGG + chr7_3:71740493-71740512 Msa1121630:intron 50.0%
GAGTTTAGGAGGGGAATGGA+AGG + chr7_3:71740519-71740538 Msa1121630:intron 50.0%
CACAACACCGAGAGACTACA+GGG + chr7_3:71740760-71740779 Msa1121630:intron 50.0%
GATACTGCCCTGTAGTCTCT+CGG - chr7_3:71740770-71740789 None:intergenic 50.0%
GGAGCAAGAACTTGCCAAGT+TGG + chr7_3:71741136-71741155 Msa1121630:CDS 50.0%
! GAGTCTGTTGAGCTTTGGCT+CGG - chr7_3:71741196-71741215 None:intergenic 50.0%
CTTCTCAGACTACACAGTGC+GGG - chr7_3:71742322-71742341 None:intergenic 50.0%
TCTGCCACCATCGAAGTTGA+AGG + chr7_3:71742558-71742577 Msa1121630:CDS 50.0%
GTTGAAGGCCGTTATGCGTA+TGG + chr7_3:71742573-71742592 Msa1121630:CDS 50.0%
GGGTATTTGTCTGGGGAGAA+AGG + chr7_3:71742594-71742613 Msa1121630:CDS 50.0%
! ATTAGCTTCTCAAGAGCGGG+TGG + chr7_3:71742856-71742875 Msa1121630:CDS 50.0%
TTCTCAAGAGCGGGTGGAAA+AGG + chr7_3:71742862-71742881 Msa1121630:CDS 50.0%
AGCGAAGAGTGACACCAGTT+GGG - chr7_3:71742936-71742955 None:intergenic 50.0%
CTGCAATTGTGCTTGTGCAG+AGG + chr7_3:71743232-71743251 Msa1121630:intron 50.0%
GGACGTAGTGAAGGCTGAAT+GGG + chr7_3:71743361-71743380 Msa1121630:CDS 50.0%
GACGTAGTGAAGGCTGAATG+GGG + chr7_3:71743362-71743381 Msa1121630:CDS 50.0%
GTTCCTCTCCATTGAATGGG+AGG - chr7_3:71743572-71743591 None:intergenic 50.0%
! GTGGTTACGCGGTCTAAGGT+TGG - chr7_3:71739503-71739522 None:intergenic 55.0%
GTGGTGTAGTAGCAGCACAG+AGG - chr7_3:71739631-71739650 None:intergenic 55.0%
! GATGAGAGAGAGTGGTGGTG+CGG - chr7_3:71739750-71739769 None:intergenic 55.0%
AGGACGATGAGAGAGAGTGG+TGG - chr7_3:71739755-71739774 None:intergenic 55.0%
! CAATTGAGCAGCGTTGGGGA+AGG + chr7_3:71739969-71739988 Msa1121630:CDS 55.0%
! ATTGAGCAGCGTTGGGGAAG+GGG + chr7_3:71739971-71739990 Msa1121630:CDS 55.0%
ACGTGCACTTGCACTGAGGA+CGG - chr7_3:71740323-71740342 None:intergenic 55.0%
TTAGGAGGGGAATGGAAGGG+AGG + chr7_3:71740523-71740542 Msa1121630:intron 55.0%
!! CCTGTAGTCTCTCGGTGTTG+TGG - chr7_3:71740762-71740781 None:intergenic 55.0%
CCACAACACCGAGAGACTAC+AGG + chr7_3:71740759-71740778 Msa1121630:intron 55.0%
!! TTTGGCTCGGTCGTCCCAAA+AGG - chr7_3:71741183-71741202 None:intergenic 55.0%
TCTATTACAGCAGGTGCGGG+AGG + chr7_3:71741860-71741879 Msa1121630:CDS 55.0%
ATTTCCAGTGCAGGACTGGG+CGG + chr7_3:71742440-71742459 Msa1121630:intron 55.0%
ACTGGGCGGACATGCTTCTT+AGG + chr7_3:71742454-71742473 Msa1121630:CDS 55.0%
ACGGCCTTCAACTTCGATGG+TGG - chr7_3:71742565-71742584 None:intergenic 55.0%
TCAAGAGCGGGTGGAAAAGG+AGG + chr7_3:71742865-71742884 Msa1121630:CDS 55.0%
CAGCGAAGAGTGACACCAGT+TGG - chr7_3:71742937-71742956 None:intergenic 55.0%
GATTCGAGGGGACGTAGTGA+AGG + chr7_3:71743352-71743371 Msa1121630:CDS 55.0%
GGGACGTAGTGAAGGCTGAA+TGG + chr7_3:71743360-71743379 Msa1121630:CDS 55.0%
GAGGACGGTTCTGTCGATCG+TGG - chr7_3:71740308-71740327 None:intergenic 60.0%
GTGCACGTGCACTTGCACTG+AGG - chr7_3:71740327-71740346 None:intergenic 60.0%
!! TGCGGGAGGTACTGATGCAC+AGG + chr7_3:71741874-71741893 Msa1121630:CDS 60.0%
!! GGTGTCACTCTTCGCTGCAC+AGG + chr7_3:71742940-71742959 Msa1121630:CDS 60.0%
ATGTCCGCCCAGTCCTGCAC+TGG - chr7_3:71742447-71742466 None:intergenic 65.0%
! GAGCAGCGTTGGGGAAGGGG+AGG + chr7_3:71739974-71739993 Msa1121630:CDS 70.0%
! CAGCGTTGGGGAAGGGGAGG+AGG + chr7_3:71739977-71739996 Msa1121630:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 71739478 71743729 71739478 ID=Msa1121630;Name=Msa1121630
chr7_3 mRNA 71739478 71743729 71739478 ID=Msa1121630-mRNA-1;Parent=Msa1121630;Name=Msa1121630-mRNA-1;_AED=0.06;_eAED=0.06;_QI=132|1|1|1|1|1|7|173|468
chr7_3 exon 71739478 71739796 71739478 ID=Msa1121630-mRNA-1:exon:18396;Parent=Msa1121630-mRNA-1
chr7_3 exon 71739943 71740029 71739943 ID=Msa1121630-mRNA-1:exon:18397;Parent=Msa1121630-mRNA-1
chr7_3 exon 71741054 71741274 71741054 ID=Msa1121630-mRNA-1:exon:18398;Parent=Msa1121630-mRNA-1
chr7_3 exon 71741692 71741895 71741692 ID=Msa1121630-mRNA-1:exon:18399;Parent=Msa1121630-mRNA-1
chr7_3 exon 71742453 71742668 71742453 ID=Msa1121630-mRNA-1:exon:18400;Parent=Msa1121630-mRNA-1
chr7_3 exon 71742775 71742961 71742775 ID=Msa1121630-mRNA-1:exon:18401;Parent=Msa1121630-mRNA-1
chr7_3 exon 71743252 71743729 71743252 ID=Msa1121630-mRNA-1:exon:18402;Parent=Msa1121630-mRNA-1
chr7_3 five_prime_UTR 71739478 71739609 71739478 ID=Msa1121630-mRNA-1:five_prime_utr;Parent=Msa1121630-mRNA-1
chr7_3 CDS 71739610 71739796 71739610 ID=Msa1121630-mRNA-1:cds;Parent=Msa1121630-mRNA-1
chr7_3 CDS 71739943 71740029 71739943 ID=Msa1121630-mRNA-1:cds;Parent=Msa1121630-mRNA-1
chr7_3 CDS 71741054 71741274 71741054 ID=Msa1121630-mRNA-1:cds;Parent=Msa1121630-mRNA-1
chr7_3 CDS 71741692 71741895 71741692 ID=Msa1121630-mRNA-1:cds;Parent=Msa1121630-mRNA-1
chr7_3 CDS 71742453 71742668 71742453 ID=Msa1121630-mRNA-1:cds;Parent=Msa1121630-mRNA-1
chr7_3 CDS 71742775 71742961 71742775 ID=Msa1121630-mRNA-1:cds;Parent=Msa1121630-mRNA-1
chr7_3 CDS 71743252 71743556 71743252 ID=Msa1121630-mRNA-1:cds;Parent=Msa1121630-mRNA-1
chr7_3 three_prime_UTR 71743557 71743729 71743557 ID=Msa1121630-mRNA-1:three_prime_utr;Parent=Msa1121630-mRNA-1
Gene Sequence

>Msa1121630

ATGGAGGTTGTTTCACACCCTCTGTGCTGCTACTACACCACTGTAACCGCCAAAACCTTTAGGTCTTATAAACAACCATTTCTCATTCCACAATCTCCCTCTTCTTCTTCTTCACCACATCTTCCTTTCTTATCTTTCCGCACCACCACTCTCTCTCATCGTCCTTCTCCTTTTCCTCTATCACCTGTAGTTCTGTTTGCGACGCCGGAGAATCAATTGAGCAGCGTTGGGGAAGGGGAGGAGGATACACACACAAGCGATTCCGCACTTCAAGATTTTTATTCTCTGAGGAAGGATGTTGAAATTGCATCACAGCGTGTCAGAGAGATTAGAGAATCATCTGGTCTACAATTATTGGAGCAAGAACTTGCCAAGTTGGAAGAGGAAGCATCTTGTAGCTCCTTTTGGGACGACCGAGCCAAAGCTCAACAGACTCTTTCGACATTGGCTGATGTCAAAGAAAAGATAAAATTGCTCAATGACTACAAAAATCAGGTTGAGGATGCAGAAACAATAGTTATGCTGACAGAGGAAATGGAATCCGTTGATAAAGGGCTATATGAAGAAGCTTCTAGTCTAATTAAAGAACTGAATAAGTCAATTGATCGGTTTGAGCTGACTCAACTTCTTTCTGGTCCTTACGACAAAGAAGGTGCTGTTATCTCTATTACAGCAGGTGCGGGAGGTACTGATGCACAGGACTGGGCGGACATGCTTCTTAGGATGTATGTGAGATGGGGTGAGAAACAGAGATACAAAACCAGAGTGGTTGAGAAATCTCTTGGAGAAGAAGCTGGAATTAAATCTGCCACCATCGAAGTTGAAGGCCGTTATGCGTATGGGTATTTGTCTGGGGAGAAAGGAACACATCGCATTGTTCGGCAATCCCCTTTTAATTCCAAAGGTCTTCGTCAGACAAGCTTTTCTGGTGTTGAAGTCATGCCTCTTCTTCCAGAAGAATCTTTGAATGTTGAAATTCCAGAAGAGGACTTGGAGATTAGCTTCTCAAGAGCGGGTGGAAAAGGAGGTCAGAATGTTAACAAGGTTGAAACTGCCGTTCGAATTACACATATCCCAACTGGTGTCACTCTTCGCTGCACAGAGGAGAGATCTCAGCTAGCAAATAAGATAAAAGCTTTAAGTCGTTTGAAAGCGAAGCTGTTGGTGATAGCTGAAGAGCAACGTGCAACTGAATTTAAACAGATTCGAGGGGACGTAGTGAAGGCTGAATGGGGACAGCAAATAAGAAATTATGTCTTCCATCCATACAAACTAGTAAAGGATGTAAGAACAGGGCAAGAAACACCAGATATCACCTCTGTTATGGATGGAGAATTGGATCCCTTCATCAAATCTTACCTCAAACACAAGTATAGTATGACAATGTCTACAAGTGGGGTCAACTAA

Protein sequence

>Msa1121630

MEVVSHPLCCYYTTVTAKTFRSYKQPFLIPQSPSSSSSPHLPFLSFRTTTLSHRPSPFPLSPVVLFATPENQLSSVGEGEEDTHTSDSALQDFYSLRKDVEIASQRVREIRESSGLQLLEQELAKLEEEASCSSFWDDRAKAQQTLSTLADVKEKIKLLNDYKNQVEDAETIVMLTEEMESVDKGLYEEASSLIKELNKSIDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESLNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIKALSRLKAKLLVIAEEQRATEFKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGQETPDITSVMDGELDPFIKSYLKHKYSMTMSTSGVN*