Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260760 | KEH38843.1 | 93.956 | 364 | 10 | 1 | 1 | 352 | 1 | 364 | 0.0 | 697 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260760 | sp|Q6NQ81|PP304_ARATH | 33.428 | 353 | 218 | 3 | 53 | 400 | 48 | 388 | 3.06e-55 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260760 | A0A072VBQ6 | 93.956 | 364 | 10 | 1 | 1 | 352 | 1 | 364 | 0.0 | 697 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0260760 | 0.821745 | 3.429854e-53 | -8.615850e-47 |
| Msa0046100 | Msa0260760 | 0.805999 | 1.017811e-49 | -8.615850e-47 |
| Msa0046750 | Msa0260760 | 0.807430 | 5.074487e-50 | -8.615850e-47 |
| Msa0089380 | Msa0260760 | 0.806252 | 9.003656e-50 | -8.615850e-47 |
| Msa0094140 | Msa0260760 | 0.810592 | 1.067641e-50 | -8.615850e-47 |
| Msa0101810 | Msa0260760 | -0.818134 | 2.296351e-52 | -8.615850e-47 |
| Msa0105420 | Msa0260760 | 0.803498 | 3.387238e-49 | -8.615850e-47 |
| Msa0157290 | Msa0260760 | 0.821958 | 3.061861e-53 | -8.615850e-47 |
| Msa0173990 | Msa0260760 | 0.806098 | 9.702841e-50 | -8.615850e-47 |
| Msa0225760 | Msa0260760 | 0.809141 | 2.191560e-50 | -8.615850e-47 |
| Msa0243100 | Msa0260760 | 0.808789 | 2.605470e-50 | -8.615850e-47 |
| Msa0244860 | Msa0260760 | 0.803970 | 2.703872e-49 | -8.615850e-47 |
| Msa0257430 | Msa0260760 | 0.852470 | 4.521858e-61 | -8.615850e-47 |
| Msa0260750 | Msa0260760 | 0.844226 | 8.618154e-59 | -8.615850e-47 |
| Msa0260760 | Msa0269820 | 0.971632 | 1.801578e-133 | -8.615850e-47 |
| Msa0260760 | Msa0283450 | 0.804198 | 2.423597e-49 | -8.615850e-47 |
| Msa0260760 | Msa0283520 | 0.804992 | 1.655181e-49 | -8.615850e-47 |
| Msa0260760 | Msa0287650 | 0.803836 | 2.882524e-49 | -8.615850e-47 |
| Msa0260760 | Msa0311860 | 0.802665 | 5.037299e-49 | -8.615850e-47 |
| Msa0260760 | Msa0332000 | 0.803744 | 3.012298e-49 | -8.615850e-47 |
| Msa0260760 | Msa0356890 | -0.809921 | 1.490201e-50 | -8.615850e-47 |
| Msa0260760 | Msa0366240 | 0.805090 | 1.579082e-49 | -8.615850e-47 |
| Msa0260760 | Msa0388960 | 0.809012 | 2.334649e-50 | -8.615850e-47 |
| Msa0260760 | Msa0419820 | 0.807144 | 5.834172e-50 | -8.615850e-47 |
| Msa0260760 | Msa0420840 | 0.800408 | 1.461495e-48 | -8.615850e-47 |
| Msa0260760 | Msa0432770 | 0.811954 | 5.407551e-51 | -8.615850e-47 |
| Msa0260760 | Msa0437710 | 0.806225 | 9.122443e-50 | -8.615850e-47 |
| Msa0260760 | Msa0466390 | 0.818526 | 1.872040e-52 | -8.615850e-47 |
| Msa0260760 | Msa0490390 | 0.800433 | 1.444732e-48 | -8.615850e-47 |
| Msa0260760 | Msa0503580 | 0.822769 | 1.984091e-53 | -8.615850e-47 |
| Msa0260760 | Msa0509970 | 0.807455 | 5.012320e-50 | -8.615850e-47 |
| Msa0260760 | Msa0574890 | 0.819976 | 8.750262e-53 | -8.615850e-47 |
| Msa0260760 | Msa0621590 | 0.801850 | 7.410441e-49 | -8.615850e-47 |
| Msa0260760 | Msa0623080 | 0.815484 | 9.030425e-52 | -8.615850e-47 |
| Msa0260760 | Msa0647130 | 0.805157 | 1.528685e-49 | -8.615850e-47 |
| Msa0260760 | Msa0677410 | 0.804608 | 1.990780e-49 | -8.615850e-47 |
| Msa0260760 | Msa0867890 | 0.806891 | 6.599646e-50 | -8.615850e-47 |
| Msa0260760 | Msa0876200 | 0.806572 | 7.706005e-50 | -8.615850e-47 |
| Msa0260760 | Msa0880140 | 0.822749 | 2.004907e-53 | -8.615850e-47 |
| Msa0260760 | Msa0896750 | 0.808598 | 2.862590e-50 | -8.615850e-47 |
| Msa0260760 | Msa0908050 | 0.805781 | 1.130852e-49 | -8.615850e-47 |
| Msa0260760 | Msa1046300 | 0.800377 | 1.483240e-48 | -8.615850e-47 |
| Msa0260760 | Msa1300490 | 0.802100 | 6.585417e-49 | -8.615850e-47 |
| Msa0260760 | Msa1312560 | 0.810727 | 9.983450e-51 | -8.615850e-47 |
| Msa0260760 | Msa1313150 | 0.804208 | 2.412454e-49 | -8.615850e-47 |
| Msa0260760 | Msa1320740 | 0.801753 | 7.758166e-49 | -8.615850e-47 |
| Msa0260760 | Msa1340650 | 0.801253 | 9.823420e-49 | -8.615850e-47 |
| Msa0260760 | Msa1346370 | 0.824836 | 6.505536e-54 | -8.615850e-47 |
| Msa0260760 | Msa1371430 | 0.804525 | 2.071844e-49 | -8.615850e-47 |
| Msa0260760 | Msa1409870 | 0.805932 | 1.051504e-49 | -8.615850e-47 |
| Msa0260760 | Msa1415640 | 0.802808 | 4.706922e-49 | -8.615850e-47 |
| Msa0260760 | Msa1423880 | 0.814223 | 1.719000e-51 | -8.615850e-47 |
| Msa0260760 | Msa1461300 | 0.823465 | 1.365425e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260760 | MtrunA17_Chr2g0319471 | 86.849 | 403 | 29 | 2 | 1 | 391 | 1 | 391 | 0.0 | 668 |
| Msa0260760 | MtrunA17_Chr2g0319471 | 92.593 | 54 | 4 | 0 | 353 | 406 | 470 | 523 | 5.64e-25 | 106 |
| Msa0260760 | MtrunA17_Chr4g0041921 | 44.444 | 378 | 190 | 5 | 6 | 364 | 5 | 381 | 6.50e-93 | 298 |
| Msa0260760 | MtrunA17_Chr4g0041891 | 40.419 | 334 | 166 | 9 | 8 | 330 | 7 | 318 | 5.68e-64 | 208 |
| Msa0260760 | MtrunA17_Chr7g0215611 | 38.141 | 312 | 165 | 7 | 98 | 399 | 53 | 346 | 3.91e-56 | 190 |
| Msa0260760 | MtrunA17_Chr7g0223561 | 46.471 | 170 | 82 | 6 | 199 | 364 | 13 | 177 | 3.71e-33 | 127 |
| Msa0260760 | MtrunA17_Chr7g0223591 | 41.232 | 211 | 114 | 7 | 177 | 382 | 94 | 299 | 2.13e-32 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0260760 | AT4G04790.3 | 33.524 | 349 | 219 | 2 | 53 | 400 | 48 | 384 | 1.02e-56 | 199 |
| Msa0260760 | AT4G04790.1 | 33.428 | 353 | 218 | 3 | 53 | 400 | 48 | 388 | 3.11e-56 | 198 |
| Msa0260760 | AT4G21880.2 | 33.882 | 304 | 187 | 3 | 98 | 400 | 74 | 364 | 1.06e-48 | 177 |
| Msa0260760 | AT4G21880.1 | 34.576 | 295 | 179 | 3 | 98 | 391 | 118 | 399 | 1.35e-48 | 177 |
| Msa0260760 | AT4G04790.2 | 35.135 | 259 | 156 | 1 | 142 | 400 | 5 | 251 | 4.90e-45 | 166 |
Find 95 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCGCAGAAAATTATTTAT+TGG | 0.183682 | 2_2:+58593396 | Msa0260760:intron |
| GGGCGATATGTTTGCTCTTC+TGG | 0.189121 | 2_2:-58592635 | None:intergenic |
| CTCTATAGCGAAGGTATTTC+AGG | 0.204333 | 2_2:+58593498 | Msa0260760:CDS |
| TGAACGGAAGGAGAATATTT+TGG | 0.245940 | 2_2:+58593432 | Msa0260760:CDS |
| GTTCCTTCATTAAATCAAAA+AGG | 0.268049 | 2_2:-58592601 | None:intergenic |
| CACTTGCTTTGAAGTCTAAA+AGG | 0.279870 | 2_2:-58593561 | None:intergenic |
| TACATATACCCCTCTTATTA+AGG | 0.287708 | 2_2:-58596566 | None:intergenic |
| AGAAGAATGAAGGTTGAATT+TGG | 0.290693 | 2_2:-58591146 | None:intergenic |
| ACCCAGTCTTGCAGTTGAAT+TGG | 0.318926 | 2_2:-58592735 | None:intergenic |
| GACATTGCAATTGAAGAAAT+GGG | 0.333617 | 2_2:+58592566 | Msa0260760:CDS |
| AGACATTGCAATTGAAGAAA+TGG | 0.334762 | 2_2:+58592565 | Msa0260760:CDS |
| GATAGAATCAACATCAAGTT+TGG | 0.334842 | 2_2:-58591200 | None:intergenic |
| TCCCAATTCAACTGCAAGAC+TGG | 0.342568 | 2_2:+58592733 | Msa0260760:CDS |
| GATTTCCTTACCGATAAATC+TGG | 0.343525 | 2_2:-58593952 | None:intergenic |
| TTTGGAGGTGTTGGAAATCA+TGG | 0.355242 | 2_2:+58593450 | Msa0260760:CDS |
| CATGCAAGTTTGCCGATGAT+TGG | 0.365015 | 2_2:-58596425 | None:intergenic |
| AATTCATTATTAAGAGTAAG+AGG | 0.368961 | 2_2:-58596792 | None:intergenic |
| GGCATTGGGAAGACTACTAT+TGG | 0.381092 | 2_2:+58593519 | Msa0260760:CDS |
| CTTCATCGAAACTCTGATTC+AGG | 0.384389 | 2_2:+58591238 | Msa0260760:CDS |
| TGAAGGATAAGCTTGGTCTT+TGG | 0.385335 | 2_2:+58596464 | Msa0260760:CDS |
| AGCATTATGTGAATTATCAT+TGG | 0.388644 | 2_2:-58596533 | None:intergenic |
| CCCAGTCTTGCAGTTGAATT+GGG | 0.389256 | 2_2:-58592734 | None:intergenic |
| AGTCAGCATTCCAGATTTAT+CGG | 0.389720 | 2_2:+58593942 | Msa0260760:CDS |
| ATATTACTCTGAGGTACGTT+TGG | 0.413517 | 2_2:-58592320 | None:intergenic |
| AGCGAAGGTATTTCAGGCAT+TGG | 0.426028 | 2_2:+58593504 | Msa0260760:CDS |
| CCTTGAGTTGTTTGATAAAG+TGG | 0.426773 | 2_2:+58592466 | Msa0260760:CDS |
| TTTCAATTAAGCGGCGAAAA+CGG | 0.431589 | 2_2:-58592412 | None:intergenic |
| AAAAGGAGCTCCTCTGCAAC+AGG | 0.440881 | 2_2:-58593544 | None:intergenic |
| TCGTAGAAATTGTTGTTTGT+GGG | 0.445232 | 2_2:-58596647 | None:intergenic |
| CTGTTTCTGTAATGTAGAAA+TGG | 0.449338 | 2_2:-58591009 | None:intergenic |
| GCGAAGGTATTTCAGGCATT+GGG | 0.450482 | 2_2:+58593505 | Msa0260760:CDS |
| CATCATCTTAAACTATAAGA+TGG | 0.453630 | 2_2:-58596750 | None:intergenic |
| GAATGAGGCTCCTTAATAAG+AGG | 0.454545 | 2_2:+58596556 | Msa0260760:exon |
| GTGCTGGTGTACATACAAAT+TGG | 0.458212 | 2_2:+58596623 | Msa0260760:three_prime_UTR |
| ATCATCTTAAACTATAAGAT+GGG | 0.468445 | 2_2:-58596749 | None:intergenic |
| CAGAGTTTCGATGAAGGTTG+AGG | 0.470953 | 2_2:-58591231 | None:intergenic |
| ACTTTGCTACTACCAACAAT+AGG | 0.471995 | 2_2:+58596601 | Msa0260760:three_prime_UTR |
| GAAAGTTGTGCAAAGATACT+AGG | 0.472120 | 2_2:+58592431 | Msa0260760:CDS |
| ATCAACATCAAGTTTGGAAT+GGG | 0.475908 | 2_2:-58591194 | None:intergenic |
| TTCGTAGAAATTGTTGTTTG+TGG | 0.476336 | 2_2:-58596648 | None:intergenic |
| CTTTCTTTCAAGAGGGTGAA+GGG | 0.493951 | 2_2:-58596690 | None:intergenic |
| ATTCATTATTAAGAGTAAGA+GGG | 0.494703 | 2_2:-58596791 | None:intergenic |
| CCCAATTCAACTGCAAGACT+GGG | 0.500332 | 2_2:+58592734 | Msa0260760:CDS |
| AAATTTGCATGGGTAAAGCT+AGG | 0.502554 | 2_2:+58592528 | Msa0260760:CDS |
| AATCAACATCAAGTTTGGAA+TGG | 0.503680 | 2_2:-58591195 | None:intergenic |
| GCATTGTATCCTTTCACGCC+TGG | 0.508185 | 2_2:-58592497 | None:intergenic |
| TGCAAATAGTTCTAATAATG+TGG | 0.508819 | 2_2:-58591099 | None:intergenic |
| CCACTTTATCAAACAACTCA+AGG | 0.516462 | 2_2:-58592466 | None:intergenic |
| TTAGAAATGAAGGATAAGCT+TGG | 0.520450 | 2_2:+58596457 | Msa0260760:CDS |
| CTGAATCAGAGTTTCGATGA+AGG | 0.521340 | 2_2:-58591237 | None:intergenic |
| TGCAATTGAAGAAATGGGGA+AGG | 0.531771 | 2_2:+58592571 | Msa0260760:CDS |
| CTGTCATATTATCAAAGAAG+AGG | 0.532204 | 2_2:+58592709 | Msa0260760:CDS |
| GTGGGTGAATGTGTACGAAA+GGG | 0.534678 | 2_2:-58591124 | None:intergenic |
| TCAATTGTATACAAAAGAAG+TGG | 0.536661 | 2_2:-58592656 | None:intergenic |
| CAATCATCGGCAAACTTGCA+TGG | 0.537585 | 2_2:+58596426 | Msa0260760:CDS |
| TGCATTGGTAGAAATTTGCA+TGG | 0.541268 | 2_2:+58592517 | Msa0260760:CDS |
| AATTCACATAATGCTGAATG+AGG | 0.542846 | 2_2:+58596541 | Msa0260760:CDS |
| TCTTTCTTTCAAGAGGGTGA+AGG | 0.544322 | 2_2:-58596691 | None:intergenic |
| ACACTTACCGTAGAAAATAG+AGG | 0.544534 | 2_2:-58591497 | None:intergenic |
| GTATACAATTGACATGGGTA+TGG | 0.544759 | 2_2:+58592667 | Msa0260760:CDS |
| CTTGAGTTGTTTGATAAAGT+GGG | 0.545096 | 2_2:+58592467 | Msa0260760:CDS |
| TTGCACAACTTTCAATTAAG+CGG | 0.546213 | 2_2:-58592421 | None:intergenic |
| TGGCTCTTTGTGAAAGTGAA+CGG | 0.547147 | 2_2:+58593416 | Msa0260760:CDS |
| AACATCAAGTTTGGAATGGG+TGG | 0.548478 | 2_2:-58591191 | None:intergenic |
| GGACGAAAACCAGGCGTGAA+AGG | 0.549368 | 2_2:+58592488 | Msa0260760:CDS |
| TGTACACCAGCACCTATTGT+TGG | 0.550756 | 2_2:-58596613 | None:intergenic |
| ATCTGTTGGCTCTATAGCGA+AGG | 0.552442 | 2_2:+58593489 | Msa0260760:CDS |
| GATAAAGTGGGACGAAAACC+AGG | 0.553212 | 2_2:+58592479 | Msa0260760:CDS |
| TGGGTGAATGTGTACGAAAG+GGG | 0.556977 | 2_2:-58591123 | None:intergenic |
| AATTTGCATGGGTAAAGCTA+GGG | 0.557559 | 2_2:+58592529 | Msa0260760:CDS |
| CTACTACCAACAATAGGTGC+TGG | 0.558631 | 2_2:+58596607 | Msa0260760:three_prime_UTR |
| TTATCATTGGCATTTGCAGA+AGG | 0.563671 | 2_2:-58596520 | None:intergenic |
| GATGAAGGTTGAGGCTTGCG+AGG | 0.573152 | 2_2:-58591222 | None:intergenic |
| GACTGTGTAACTAGCAATGA+AGG | 0.573585 | 2_2:-58593923 | None:intergenic |
| GGTGGGTGAATGTGTACGAA+AGG | 0.576735 | 2_2:-58591125 | None:intergenic |
| AATGAGGCTCCTTAATAAGA+GGG | 0.586870 | 2_2:+58596557 | Msa0260760:exon |
| CGTGAAAGGATACAATGCAT+TGG | 0.602128 | 2_2:+58592502 | Msa0260760:CDS |
| GAATGAAGGTTGAATTTGGT+GGG | 0.605142 | 2_2:-58591142 | None:intergenic |
| GGGTGAATGTGTACGAAAGG+GGG | 0.611422 | 2_2:-58591122 | None:intergenic |
| AGAGTAATATATCATTGCGA+AGG | 0.611702 | 2_2:+58592333 | Msa0260760:CDS |
| AAGAGTCAGAAACCAATCAT+CGG | 0.615923 | 2_2:+58596413 | Msa0260760:CDS |
| TGCAGATGAATTGTCTGAAG+CGG | 0.616945 | 2_2:+58591459 | Msa0260760:intron |
| TCTTTGTGAAAGTGAACGGA+AGG | 0.619168 | 2_2:+58593420 | Msa0260760:CDS |
| AGAATGAAGGTTGAATTTGG+TGG | 0.631495 | 2_2:-58591143 | None:intergenic |
| TTTGATTTAATGAAGGAACA+AGG | 0.634361 | 2_2:+58592605 | Msa0260760:CDS |
| TCATCTTAAACTATAAGATG+GGG | 0.634826 | 2_2:-58596748 | None:intergenic |
| CAATTGTATACAAAAGAAGT+GGG | 0.639916 | 2_2:-58592655 | None:intergenic |
| ACTATTGGAACCTGTTGCAG+AGG | 0.644044 | 2_2:+58593534 | Msa0260760:CDS |
| CGCAATGATATATTACTCTG+AGG | 0.647892 | 2_2:-58592329 | None:intergenic |
| GCATTGGTAGAAATTTGCAT+GGG | 0.653918 | 2_2:+58592518 | Msa0260760:CDS |
| ACATTGCAATTGAAGAAATG+GGG | 0.655227 | 2_2:+58592567 | Msa0260760:CDS |
| GTTACTATGAAATGATGCTG+TGG | 0.658555 | 2_2:+58592756 | Msa0260760:CDS |
| TGCAAAGATACTAGGAACTG+AGG | 0.673859 | 2_2:+58592439 | Msa0260760:CDS |
| CACTTTATCAAACAACTCAA+GGG | 0.689617 | 2_2:-58592465 | None:intergenic |
| ATGAGGCTCCTTAATAAGAG+GGG | 0.691913 | 2_2:+58596558 | Msa0260760:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAGTTAATTTATTCAT+AGG | - | chr2_2:58591863-58591882 | None:intergenic | 10.0% |
| !! | ATGAATTGTAATTAATATAG+TGG | - | chr2_2:58591272-58591291 | None:intergenic | 15.0% |
| !!! | ATAAAAACTGAATTTTTTTC+TGG | + | chr2_2:58591304-58591323 | Msa0260760:intron | 15.0% |
| !! | ATATTGAAGAAAAAAAAATC+TGG | + | chr2_2:58591366-58591385 | Msa0260760:intron | 15.0% |
| !! | TATTGAAGAAAAAAAAATCT+GGG | + | chr2_2:58591367-58591386 | Msa0260760:intron | 15.0% |
| !! | TAATAATGAAGAAAAAATTC+AGG | + | chr2_2:58592787-58592806 | Msa0260760:CDS | 15.0% |
| !!! | TAATTTTCTTACAAATGTAA+TGG | - | chr2_2:58593107-58593126 | None:intergenic | 15.0% |
| !!! | TTTTTATTTTACACTAACAT+TGG | + | chr2_2:58595719-58595738 | Msa0260760:intron | 15.0% |
| !!! | TTCAGTTTTTATTCATTTTC+TGG | - | chr2_2:58591296-58591315 | None:intergenic | 20.0% |
| !! | ATAGTTAATTTATTCATAGG+AGG | - | chr2_2:58591860-58591879 | None:intergenic | 20.0% |
| !!! | GTTTGTCATAATTTATTTCT+TGG | + | chr2_2:58592902-58592921 | Msa0260760:intron | 20.0% |
| !!! | TTAACAGATATTTTGTTTCA+AGG | + | chr2_2:58593343-58593362 | Msa0260760:intron | 20.0% |
| !! | GCATTAATTGACATAAATTA+AGG | + | chr2_2:58593702-58593721 | Msa0260760:intron | 20.0% |
| !!! | GTTTTTAGAGTTTATTATGA+TGG | + | chr2_2:58593798-58593817 | Msa0260760:intron | 20.0% |
| !!! | TATCTTTCTTTTTATAGACA+AGG | - | chr2_2:58595293-58595312 | None:intergenic | 20.0% |
| !! | ATATACACAACTTACTTTAA+TGG | - | chr2_2:58595387-58595406 | None:intergenic | 20.0% |
| !! | TAAGTTGTGTATATTTAAGT+TGG | + | chr2_2:58595393-58595412 | Msa0260760:intron | 20.0% |
| !!! | AAGTTGTGTATATTTAAGTT+GGG | + | chr2_2:58595394-58595413 | Msa0260760:intron | 20.0% |
| !! | GAAGATAAAGTAAATTTATG+GGG | - | chr2_2:58595439-58595458 | None:intergenic | 20.0% |
| !! | GGAAGATAAAGTAAATTTAT+GGG | - | chr2_2:58595440-58595459 | None:intergenic | 20.0% |
| !! | AGGAAGATAAAGTAAATTTA+TGG | - | chr2_2:58595441-58595460 | None:intergenic | 20.0% |
| !! | TCATACAATTTGCATAAAAA+GGG | - | chr2_2:58595896-58595915 | None:intergenic | 20.0% |
| !! | TTCATACAATTTGCATAAAA+AGG | - | chr2_2:58595897-58595916 | None:intergenic | 20.0% |
| !! | ATCATCTTAAACTATAAGAT+GGG | - | chr2_2:58596752-58596771 | None:intergenic | 20.0% |
| !! | ATTCATTATTAAGAGTAAGA+GGG | - | chr2_2:58596794-58596813 | None:intergenic | 20.0% |
| !! | AATTCATTATTAAGAGTAAG+AGG | - | chr2_2:58596795-58596814 | None:intergenic | 20.0% |
| !!! | TGCAAATAGTTCTAATAATG+TGG | - | chr2_2:58591102-58591121 | None:intergenic | 25.0% |
| ! | ATGAAAAAGAAGAAGAATGA+AGG | - | chr2_2:58591159-58591178 | None:intergenic | 25.0% |
| !!! | ATTTTGACCAATTACGTTAA+TGG | + | chr2_2:58591335-58591354 | Msa0260760:intron | 25.0% |
| ! | ACAATAACCATTAACGTAAT+TGG | - | chr2_2:58591345-58591364 | None:intergenic | 25.0% |
| ! | GTATTGTTCTTACTTATTTC+AGG | + | chr2_2:58592215-58592234 | Msa0260760:intron | 25.0% |
| !!! | TCACCTTTTTGATTTAATGA+AGG | + | chr2_2:58592598-58592617 | Msa0260760:CDS | 25.0% |
| ! | GTTCCTTCATTAAATCAAAA+AGG | - | chr2_2:58592604-58592623 | None:intergenic | 25.0% |
| !! | TTTGATTTAATGAAGGAACA+AGG | + | chr2_2:58592605-58592624 | Msa0260760:CDS | 25.0% |
| ! | CAATTGTATACAAAAGAAGT+GGG | - | chr2_2:58592658-58592677 | None:intergenic | 25.0% |
| ! | TCAATTGTATACAAAAGAAG+TGG | - | chr2_2:58592659-58592678 | None:intergenic | 25.0% |
| !! | TCTTTTGTATACAATTGACA+TGG | + | chr2_2:58592661-58592680 | Msa0260760:CDS | 25.0% |
| !! | CTTTTGTATACAATTGACAT+GGG | + | chr2_2:58592662-58592681 | Msa0260760:CDS | 25.0% |
| !!! | AATTTTGAAACATGCATGTT+TGG | - | chr2_2:58593249-58593268 | None:intergenic | 25.0% |
| ! | AAACATGCATGTTTCAAAAT+TGG | + | chr2_2:58593248-58593267 | Msa0260760:intron | 25.0% |
| !! | TAATTTTCTGCGACATAAAT+TGG | - | chr2_2:58593391-58593410 | None:intergenic | 25.0% |
| ! | TGTCGCAGAAAATTATTTAT+TGG | + | chr2_2:58593396-58593415 | Msa0260760:intron | 25.0% |
| ! | ATAAAAAAGCTTTCATCTGT+TGG | + | chr2_2:58593475-58593494 | Msa0260760:CDS | 25.0% |
| !! | AATAAACTCTAAAAACACAC+TGG | - | chr2_2:58593794-58593813 | None:intergenic | 25.0% |
| ! | TAGAGTTTATTATGATGGTA+TGG | + | chr2_2:58593803-58593822 | Msa0260760:intron | 25.0% |
| ! | GGCAAAAAATTATAGAGAAA+GGG | - | chr2_2:58593843-58593862 | None:intergenic | 25.0% |
| ! | AGGCAAAAAATTATAGAGAA+AGG | - | chr2_2:58593844-58593863 | None:intergenic | 25.0% |
| ! | AATCTCACTAAAATATGTAC+AGG | - | chr2_2:58593864-58593883 | None:intergenic | 25.0% |
| !!! | GTAGAATATTTTAAGTAGCT+TGG | + | chr2_2:58594447-58594466 | Msa0260760:intron | 25.0% |
| ! | TTATAAGCTAGATATCGAAA+GGG | - | chr2_2:58594478-58594497 | None:intergenic | 25.0% |
| ! | TAGCACAAGATTATTCAAAA+TGG | + | chr2_2:58594844-58594863 | Msa0260760:intron | 25.0% |
| ! | GTTTCTACTCAATATAAATC+AGG | - | chr2_2:58594903-58594922 | None:intergenic | 25.0% |
| !! | TTTTATTCATGCATGTTCTT+TGG | + | chr2_2:58595029-58595048 | Msa0260760:intron | 25.0% |
| ! | AAGAAAGATAATCTAGTACT+CGG | + | chr2_2:58595303-58595322 | Msa0260760:intron | 25.0% |
| !! | AAATCTGTTTGTCATGTTTT+TGG | - | chr2_2:58595360-58595379 | None:intergenic | 25.0% |
| !! | TCAAGAATACATTTTTGACA+AGG | - | chr2_2:58595461-58595480 | None:intergenic | 25.0% |
| ! | AACTAAATGATACATCCTAT+TGG | + | chr2_2:58595632-58595651 | Msa0260760:intron | 25.0% |
| !!! | GCTTATGTTGATTTTGATTT+TGG | + | chr2_2:58595774-58595793 | Msa0260760:intron | 25.0% |
| ! | TAAGTTACAAATTGATGAAC+TGG | + | chr2_2:58595834-58595853 | Msa0260760:intron | 25.0% |
| ! | TATGAATGTTCTCTTTGATA+AGG | + | chr2_2:58595858-58595877 | Msa0260760:intron | 25.0% |
| !! | ATTTTTGTCTGCATGATTAT+AGG | + | chr2_2:58596375-58596394 | Msa0260760:intron | 25.0% |
| ! | AGCATTATGTGAATTATCAT+TGG | - | chr2_2:58596536-58596555 | None:intergenic | 25.0% |
| !! | CATTTTTCTTTCTTTCAAGA+GGG | - | chr2_2:58596700-58596719 | None:intergenic | 25.0% |
| !! | ACATTTTTCTTTCTTTCAAG+AGG | - | chr2_2:58596701-58596720 | None:intergenic | 25.0% |
| ! | TCATCTTAAACTATAAGATG+GGG | - | chr2_2:58596751-58596770 | None:intergenic | 25.0% |
| ! | CATCATCTTAAACTATAAGA+TGG | - | chr2_2:58596753-58596772 | None:intergenic | 25.0% |
| !! | CTGTTTCTGTAATGTAGAAA+TGG | - | chr2_2:58591012-58591031 | None:intergenic | 30.0% |
| AGAAGAATGAAGGTTGAATT+TGG | - | chr2_2:58591149-58591168 | None:intergenic | 30.0% | |
| ! | ATCAACATCAAGTTTGGAAT+GGG | - | chr2_2:58591197-58591216 | None:intergenic | 30.0% |
| AATCAACATCAAGTTTGGAA+TGG | - | chr2_2:58591198-58591217 | None:intergenic | 30.0% | |
| GATAGAATCAACATCAAGTT+TGG | - | chr2_2:58591203-58591222 | None:intergenic | 30.0% | |
| ! | CAGATTTCCTCTATTTTCTA+CGG | + | chr2_2:58591490-58591509 | Msa0260760:CDS | 30.0% |
| !!! | TGTATGTGTCTGTTTTGATT+AGG | + | chr2_2:58591541-58591560 | Msa0260760:intron | 30.0% |
| !!! | TGTCTGTTTTGATTAGGATA+TGG | + | chr2_2:58591547-58591566 | Msa0260760:intron | 30.0% |
| ATTCATAGGAGGTGAAAAAA+GGG | - | chr2_2:58591849-58591868 | None:intergenic | 30.0% | |
| TATTCATAGGAGGTGAAAAA+AGG | - | chr2_2:58591850-58591869 | None:intergenic | 30.0% | |
| TACACTAATAGTAGTTCAAG+TGG | - | chr2_2:58592198-58592217 | None:intergenic | 30.0% | |
| TTGTTCTTACTTATTTCAGG+TGG | + | chr2_2:58592218-58592237 | Msa0260760:intron | 30.0% | |
| AGAGTAATATATCATTGCGA+AGG | + | chr2_2:58592333-58592352 | Msa0260760:CDS | 30.0% | |
| TTGCACAACTTTCAATTAAG+CGG | - | chr2_2:58592424-58592443 | None:intergenic | 30.0% | |
| CACTTTATCAAACAACTCAA+GGG | - | chr2_2:58592468-58592487 | None:intergenic | 30.0% | |
| ! | CTTGAGTTGTTTGATAAAGT+GGG | + | chr2_2:58592467-58592486 | Msa0260760:CDS | 30.0% |
| AGACATTGCAATTGAAGAAA+TGG | + | chr2_2:58592565-58592584 | Msa0260760:CDS | 30.0% | |
| GACATTGCAATTGAAGAAAT+GGG | + | chr2_2:58592566-58592585 | Msa0260760:CDS | 30.0% | |
| ACATTGCAATTGAAGAAATG+GGG | + | chr2_2:58592567-58592586 | Msa0260760:CDS | 30.0% | |
| CTGTCATATTATCAAAGAAG+AGG | + | chr2_2:58592709-58592728 | Msa0260760:CDS | 30.0% | |
| TATGCTCAAACTTCTATCAT+TGG | + | chr2_2:58592929-58592948 | Msa0260760:intron | 30.0% | |
| TGAACATCTATGTACAGAAA+AGG | - | chr2_2:58593320-58593339 | None:intergenic | 30.0% | |
| ! | TATCTTCTTGTTGTAACCTT+CGG | + | chr2_2:58593600-58593619 | Msa0260760:intron | 30.0% |
| ! | ATTATTCTTTTCCAAACCGA+AGG | - | chr2_2:58593619-58593638 | None:intergenic | 30.0% |
| AGGCTGCAAATATATTTCTT+TGG | + | chr2_2:58593722-58593741 | Msa0260760:intron | 30.0% | |
| AGTTTATTATGATGGTATGG+AGG | + | chr2_2:58593806-58593825 | Msa0260760:intron | 30.0% | |
| GTTTATTATGATGGTATGGA+GGG | + | chr2_2:58593807-58593826 | Msa0260760:intron | 30.0% | |
| TGCATAAAGTAAGTACTTCA+CGG | - | chr2_2:58594013-58594032 | None:intergenic | 30.0% | |
| GTAACACAAAAATGTGAAAC+TGG | - | chr2_2:58594062-58594081 | None:intergenic | 30.0% | |
| AGAATAGGTCCAAACTTTAA+AGG | - | chr2_2:58594211-58594230 | None:intergenic | 30.0% | |
| !!! | TTCGATTTTTTACACAGAAC+TGG | + | chr2_2:58594261-58594280 | Msa0260760:intron | 30.0% |
| !!! | TCGATTTTTTACACAGAACT+GGG | + | chr2_2:58594262-58594281 | Msa0260760:intron | 30.0% |
| ! | ATCGAGTAGTATGAGATTTT+CGG | + | chr2_2:58594425-58594444 | Msa0260760:intron | 30.0% |
| TATAAGCTAGATATCGAAAG+GGG | - | chr2_2:58594477-58594496 | None:intergenic | 30.0% | |
| CTTATAAGCTAGATATCGAA+AGG | - | chr2_2:58594479-58594498 | None:intergenic | 30.0% | |
| !! | TTTTAAGGGACAGTTTCATA+AGG | + | chr2_2:58594704-58594723 | Msa0260760:intron | 30.0% |
| TTTAAGGGACAGTTTCATAA+GGG | + | chr2_2:58594705-58594724 | Msa0260760:intron | 30.0% | |
| ! | GATTATTCAAAATGGCTTGT+TGG | + | chr2_2:58594852-58594871 | Msa0260760:intron | 30.0% |
| ACCTTTGACAAATTTGATTG+TGG | - | chr2_2:58595007-58595026 | None:intergenic | 30.0% | |
| TGTTTCATCTGATGTATTGT+TGG | + | chr2_2:58595102-58595121 | Msa0260760:intron | 30.0% | |
| ! | TCTTTTTATAGACAAGGTTC+TGG | - | chr2_2:58595287-58595306 | None:intergenic | 30.0% |
| GAATCATCTTGTGTTGTATT+TGG | + | chr2_2:58595671-58595690 | Msa0260760:intron | 30.0% | |
| ! | GTATTTGGAATAAGCGTTTA+AGG | + | chr2_2:58595686-58595705 | Msa0260760:intron | 30.0% |
| ! | TTTTGTGATCCTACATCAAT+TGG | + | chr2_2:58595951-58595970 | Msa0260760:intron | 30.0% |
| !!! | CTAACTTTTGGAATTGAGTT+AGG | + | chr2_2:58596020-58596039 | Msa0260760:intron | 30.0% |
| GCACAAAAACTACAGAATTT+GGG | - | chr2_2:58596052-58596071 | None:intergenic | 30.0% | |
| TGCACAAAAACTACAGAATT+TGG | - | chr2_2:58596053-58596072 | None:intergenic | 30.0% | |
| AACACGATCAAACTTATATG+TGG | + | chr2_2:58596080-58596099 | Msa0260760:intron | 30.0% | |
| !!! | GGAGTTGTTTTTAGAAATGA+AGG | + | chr2_2:58596447-58596466 | Msa0260760:CDS | 30.0% |
| TTAGAAATGAAGGATAAGCT+TGG | + | chr2_2:58596457-58596476 | Msa0260760:CDS | 30.0% | |
| ! | GAATCGTAACATTTTTGTGA+AGG | - | chr2_2:58596490-58596509 | None:intergenic | 30.0% |
| AATTCACATAATGCTGAATG+AGG | + | chr2_2:58596541-58596560 | Msa0260760:CDS | 30.0% | |
| TACATATACCCCTCTTATTA+AGG | - | chr2_2:58596569-58596588 | None:intergenic | 30.0% | |
| !! | TCGTAGAAATTGTTGTTTGT+GGG | - | chr2_2:58596650-58596669 | None:intergenic | 30.0% |
| !! | TTCGTAGAAATTGTTGTTTG+TGG | - | chr2_2:58596651-58596670 | None:intergenic | 30.0% |
| GAATGAAGGTTGAATTTGGT+GGG | - | chr2_2:58591145-58591164 | None:intergenic | 35.0% | |
| AGAATGAAGGTTGAATTTGG+TGG | - | chr2_2:58591146-58591165 | None:intergenic | 35.0% | |
| ACACTTACCGTAGAAAATAG+AGG | - | chr2_2:58591500-58591519 | None:intergenic | 35.0% | |
| TTCATAGGAGGTGAAAAAAG+GGG | - | chr2_2:58591848-58591867 | None:intergenic | 35.0% | |
| !! | CTGTTTTCTTGTTGTCTGAA+AGG | + | chr2_2:58591890-58591909 | Msa0260760:intron | 35.0% |
| AATTGTTAGCGTCATGTTAG+TGG | + | chr2_2:58591935-58591954 | Msa0260760:intron | 35.0% | |
| ACATTGCTGAGTTACTCTAA+GGG | - | chr2_2:58591993-58592012 | None:intergenic | 35.0% | |
| AACATTGCTGAGTTACTCTA+AGG | - | chr2_2:58591994-58592013 | None:intergenic | 35.0% | |
| TACATAGTGTTGTCACATAG+AGG | + | chr2_2:58592083-58592102 | Msa0260760:intron | 35.0% | |
| ATTTGCAGCATCAACTTTCT+CGG | - | chr2_2:58592267-58592286 | None:intergenic | 35.0% | |
| !! | ATATTACTCTGAGGTACGTT+TGG | - | chr2_2:58592323-58592342 | None:intergenic | 35.0% |
| CGCAATGATATATTACTCTG+AGG | - | chr2_2:58592332-58592351 | None:intergenic | 35.0% | |
| TTTCAATTAAGCGGCGAAAA+CGG | - | chr2_2:58592415-58592434 | None:intergenic | 35.0% | |
| GAAAGTTGTGCAAAGATACT+AGG | + | chr2_2:58592431-58592450 | Msa0260760:CDS | 35.0% | |
| CCACTTTATCAAACAACTCA+AGG | - | chr2_2:58592469-58592488 | None:intergenic | 35.0% | |
| ! | CCTTGAGTTGTTTGATAAAG+TGG | + | chr2_2:58592466-58592485 | Msa0260760:CDS | 35.0% |
| ! | TGCATTGGTAGAAATTTGCA+TGG | + | chr2_2:58592517-58592536 | Msa0260760:CDS | 35.0% |
| ! | GCATTGGTAGAAATTTGCAT+GGG | + | chr2_2:58592518-58592537 | Msa0260760:CDS | 35.0% |
| AAATTTGCATGGGTAAAGCT+AGG | + | chr2_2:58592528-58592547 | Msa0260760:CDS | 35.0% | |
| AATTTGCATGGGTAAAGCTA+GGG | + | chr2_2:58592529-58592548 | Msa0260760:CDS | 35.0% | |
| GTATACAATTGACATGGGTA+TGG | + | chr2_2:58592667-58592686 | Msa0260760:CDS | 35.0% | |
| GTTACTATGAAATGATGCTG+TGG | + | chr2_2:58592756-58592775 | Msa0260760:CDS | 35.0% | |
| !!! | ACACTTTTGATTTACGAGGT+GGG | + | chr2_2:58592846-58592865 | Msa0260760:intron | 35.0% |
| GAACTTGCGAGTATATGTTA+CGG | - | chr2_2:58592962-58592981 | None:intergenic | 35.0% | |
| ! | TATTTTGTCCGTGTTTTGTG+TGG | + | chr2_2:58593044-58593063 | Msa0260760:intron | 35.0% |
| ! | TGAACGGAAGGAGAATATTT+TGG | + | chr2_2:58593432-58593451 | Msa0260760:CDS | 35.0% |
| !! | CACTTGCTTTGAAGTCTAAA+AGG | - | chr2_2:58593564-58593583 | None:intergenic | 35.0% |
| ! | CTTTTAGACTTCAAAGCAAG+TGG | + | chr2_2:58593562-58593581 | Msa0260760:CDS | 35.0% |
| AGTCAGCATTCCAGATTTAT+CGG | + | chr2_2:58593942-58593961 | Msa0260760:CDS | 35.0% | |
| GATTTCCTTACCGATAAATC+TGG | - | chr2_2:58593955-58593974 | None:intergenic | 35.0% | |
| GAAACTGGTGATATAGTTCT+AGG | - | chr2_2:58594047-58594066 | None:intergenic | 35.0% | |
| ATTACCAATAACATAAGCGC+AGG | + | chr2_2:58594184-58594203 | Msa0260760:intron | 35.0% | |
| TCAGGGTTTAATTCGAGAAT+AGG | - | chr2_2:58594226-58594245 | None:intergenic | 35.0% | |
| ACTGGGATGTATCCTAAAAA+TGG | + | chr2_2:58594279-58594298 | Msa0260760:intron | 35.0% | |
| CTGGGATGTATCCTAAAAAT+GGG | + | chr2_2:58594280-58594299 | Msa0260760:intron | 35.0% | |
| TGGGATGTATCCTAAAAATG+GGG | + | chr2_2:58594281-58594300 | Msa0260760:intron | 35.0% | |
| !! | TTCTTGAAGTCCCCATTTTT+AGG | - | chr2_2:58594294-58594313 | None:intergenic | 35.0% |
| ! | AACTCGAGTTCTTTTTCTAG+AGG | + | chr2_2:58594317-58594336 | Msa0260760:intron | 35.0% |
| TTGATGGGACTTAAGTACTA+TGG | + | chr2_2:58594386-58594405 | Msa0260760:intron | 35.0% | |
| TGATGGGACTTAAGTACTAT+GGG | + | chr2_2:58594387-58594406 | Msa0260760:intron | 35.0% | |
| AATCTCATACTACTCGATGT+AGG | - | chr2_2:58594423-58594442 | None:intergenic | 35.0% | |
| ! | ATCTAGCTTATAAGAGAGCT+TGG | + | chr2_2:58594485-58594504 | Msa0260760:intron | 35.0% |
| ! | TCTAGCTTATAAGAGAGCTT+GGG | + | chr2_2:58594486-58594505 | Msa0260760:intron | 35.0% |
| TTATAAGAGAGCTTGGGAAA+GGG | + | chr2_2:58594492-58594511 | Msa0260760:intron | 35.0% | |
| ! | ACACTCTATGATGCTTTGTT+CGG | - | chr2_2:58594545-58594564 | None:intergenic | 35.0% |
| ! | TGATAGGGACTTGGATATTT+TGG | + | chr2_2:58594599-58594618 | Msa0260760:intron | 35.0% |
| ! | GATAGGGACTTGGATATTTT+GGG | + | chr2_2:58594600-58594619 | Msa0260760:intron | 35.0% |
| ! | ATAGGGACTTGGATATTTTG+GGG | + | chr2_2:58594601-58594620 | Msa0260760:intron | 35.0% |
| ! | TGTTTGGTGGAAAGTTTAAG+TGG | + | chr2_2:58594654-58594673 | Msa0260760:intron | 35.0% |
| AAAGAACTGCGTCTATCAAA+AGG | - | chr2_2:58594752-58594771 | None:intergenic | 35.0% | |
| TAAGAAACCTAGAGCAGAAT+TGG | + | chr2_2:58594817-58594836 | Msa0260760:intron | 35.0% | |
| CATAGTTCCATGTGAACATT+TGG | + | chr2_2:58594981-58595000 | Msa0260760:intron | 35.0% | |
| GCCACAATCAAATTTGTCAA+AGG | + | chr2_2:58595003-58595022 | Msa0260760:intron | 35.0% | |
| ! | TGTATTGTTGGTGTTCTTGA+AGG | + | chr2_2:58595114-58595133 | Msa0260760:intron | 35.0% |
| ! | GGGAGGCATAAATAAATTCA+AGG | + | chr2_2:58595141-58595160 | Msa0260760:intron | 35.0% |
| ! | ACAGTGACTTTGTTATGGAA+GGG | - | chr2_2:58595509-58595528 | None:intergenic | 35.0% |
| ! | AACAGTGACTTTGTTATGGA+AGG | - | chr2_2:58595510-58595529 | None:intergenic | 35.0% |
| ACAGAACAGTGACTTTGTTA+TGG | - | chr2_2:58595514-58595533 | None:intergenic | 35.0% | |
| ATCTGAATGCTATGCATCAT+AGG | + | chr2_2:58595558-58595577 | Msa0260760:intron | 35.0% | |
| ! | TGATTTGTGTAAGCTTCTCA+AGG | + | chr2_2:58595810-58595829 | Msa0260760:intron | 35.0% |
| TTCAATGTTGACAAGAAGCA+TGG | + | chr2_2:58595924-58595943 | Msa0260760:intron | 35.0% | |
| GACATACTTCCAATTGATGT+AGG | - | chr2_2:58595963-58595982 | None:intergenic | 35.0% | |
| ATTCCAAAAGTTAGCTCAAG+AGG | - | chr2_2:58596014-58596033 | None:intergenic | 35.0% | |
| AAAACTACAGAATTTGGGAG+CGG | - | chr2_2:58596047-58596066 | None:intergenic | 35.0% | |
| TGATACAGTGTTGTCAATTG+TGG | - | chr2_2:58596282-58596301 | None:intergenic | 35.0% | |
| ACAAGTCAACTTGTATGCTA+TGG | - | chr2_2:58596344-58596363 | None:intergenic | 35.0% | |
| AAGAGTCAGAAACCAATCAT+CGG | + | chr2_2:58596413-58596432 | Msa0260760:CDS | 35.0% | |
| TTATCATTGGCATTTGCAGA+AGG | - | chr2_2:58596523-58596542 | None:intergenic | 35.0% | |
| AATGAGGCTCCTTAATAAGA+GGG | + | chr2_2:58596557-58596576 | Msa0260760:exon | 35.0% | |
| ACTTTGCTACTACCAACAAT+AGG | + | chr2_2:58596601-58596620 | Msa0260760:three_prime_UTR | 35.0% | |
| ! | AACATCAAGTTTGGAATGGG+TGG | - | chr2_2:58591194-58591213 | None:intergenic | 40.0% |
| CTGAATCAGAGTTTCGATGA+AGG | - | chr2_2:58591240-58591259 | None:intergenic | 40.0% | |
| CTTCATCGAAACTCTGATTC+AGG | + | chr2_2:58591238-58591257 | Msa0260760:CDS | 40.0% | |
| TGCAGATGAATTGTCTGAAG+CGG | + | chr2_2:58591459-58591478 | Msa0260760:intron | 40.0% | |
| AGAAAAGTAACCACGTGTGT+CGG | - | chr2_2:58591736-58591755 | None:intergenic | 40.0% | |
| TACTAGTGTCAGTGTTGTGT+CGG | + | chr2_2:58591764-58591783 | Msa0260760:intron | 40.0% | |
| TCATAGGAGGTGAAAAAAGG+GGG | - | chr2_2:58591847-58591866 | None:intergenic | 40.0% | |
| TTAGCGTCATGTTAGTGGTT+AGG | + | chr2_2:58591940-58591959 | Msa0260760:intron | 40.0% | |
| TAGCGTCATGTTAGTGGTTA+GGG | + | chr2_2:58591941-58591960 | Msa0260760:intron | 40.0% | |
| CCAATGTTGTCAATAGATCG+CGG | - | chr2_2:58592164-58592183 | None:intergenic | 40.0% | |
| TGCAAAGATACTAGGAACTG+AGG | + | chr2_2:58592439-58592458 | Msa0260760:CDS | 40.0% | |
| CGTGAAAGGATACAATGCAT+TGG | + | chr2_2:58592502-58592521 | Msa0260760:CDS | 40.0% | |
| TGCAATTGAAGAAATGGGGA+AGG | + | chr2_2:58592571-58592590 | Msa0260760:CDS | 40.0% | |
| !!! | GACGACACTTTTGATTTACG+AGG | + | chr2_2:58592842-58592861 | Msa0260760:CDS | 40.0% |
| !!! | GACACTTTTGATTTACGAGG+TGG | + | chr2_2:58592845-58592864 | Msa0260760:intron | 40.0% |
| CCAATTAGCCACACAAAACA+CGG | - | chr2_2:58593055-58593074 | None:intergenic | 40.0% | |
| TGGCTCTTTGTGAAAGTGAA+CGG | + | chr2_2:58593416-58593435 | Msa0260760:CDS | 40.0% | |
| TCTTTGTGAAAGTGAACGGA+AGG | + | chr2_2:58593420-58593439 | Msa0260760:CDS | 40.0% | |
| !! | ACGGAAGGAGAATATTTTGG+AGG | + | chr2_2:58593435-58593454 | Msa0260760:CDS | 40.0% |
| !! | GGAGAATATTTTGGAGGTGT+TGG | + | chr2_2:58593441-58593460 | Msa0260760:CDS | 40.0% |
| !! | TTTGGAGGTGTTGGAAATCA+TGG | + | chr2_2:58593450-58593469 | Msa0260760:CDS | 40.0% |
| !! | CTCTATAGCGAAGGTATTTC+AGG | + | chr2_2:58593498-58593517 | Msa0260760:CDS | 40.0% |
| ! | TCTTGTTGTAACCTTCGGTT+TGG | + | chr2_2:58593605-58593624 | Msa0260760:intron | 40.0% |
| TATGATGGTATGGAGGGATT+AGG | + | chr2_2:58593813-58593832 | Msa0260760:intron | 40.0% | |
| GACTGTGTAACTAGCAATGA+AGG | - | chr2_2:58593926-58593945 | None:intergenic | 40.0% | |
| GCATTCCAGATTTATCGGTA+AGG | + | chr2_2:58593947-58593966 | Msa0260760:intron | 40.0% | |
| CAGAAACTATATCATGCACG+AGG | - | chr2_2:58593977-58593996 | None:intergenic | 40.0% | |
| TCAAATGATGACTACCCACA+TGG | - | chr2_2:58594370-58594389 | None:intergenic | 40.0% | |
| TGTGGGTAGTCATCATTTGA+TGG | + | chr2_2:58594370-58594389 | Msa0260760:intron | 40.0% | |
| GTGGGTAGTCATCATTTGAT+GGG | + | chr2_2:58594371-58594390 | Msa0260760:intron | 40.0% | |
| GATGGGACTTAAGTACTATG+GGG | + | chr2_2:58594388-58594407 | Msa0260760:intron | 40.0% | |
| ATGGGACTTAAGTACTATGG+GGG | + | chr2_2:58594389-58594408 | Msa0260760:intron | 40.0% | |
| ATACTACTCGATGTAGGACT+TGG | - | chr2_2:58594417-58594436 | None:intergenic | 40.0% | |
| CTTATAAGAGAGCTTGGGAA+AGG | + | chr2_2:58594491-58594510 | Msa0260760:intron | 40.0% | |
| ! | ATCCTATGCTACTTGACATG+AGG | - | chr2_2:58594635-58594654 | None:intergenic | 40.0% |
| GTCAAGTAGCATAGGATGTT+TGG | + | chr2_2:58594638-58594657 | Msa0260760:intron | 40.0% | |
| AAGTAGCATAGGATGTTTGG+TGG | + | chr2_2:58594641-58594660 | Msa0260760:intron | 40.0% | |
| TTAAAAGCTAGCTATCGAGG+GGG | - | chr2_2:58594690-58594709 | None:intergenic | 40.0% | |
| CTTAAAAGCTAGCTATCGAG+GGG | - | chr2_2:58594691-58594710 | None:intergenic | 40.0% | |
| CCTTAAAAGCTAGCTATCGA+GGG | - | chr2_2:58594692-58594711 | None:intergenic | 40.0% | |
| !!! | CCTCGATAGCTAGCTTTTAA+GGG | + | chr2_2:58594690-58594709 | Msa0260760:intron | 40.0% |
| ATTGTGGCCAAATGTTCACA+TGG | - | chr2_2:58594991-58595010 | None:intergenic | 40.0% | |
| ! | TTGGTGTTCTTGAAGGTTGA+GGG | + | chr2_2:58595121-58595140 | Msa0260760:intron | 40.0% |
| TTCTCATATGACGAGGAAGA+AGG | - | chr2_2:58595193-58595212 | None:intergenic | 40.0% | |
| AATGAGCTTCTCATATGACG+AGG | - | chr2_2:58595200-58595219 | None:intergenic | 40.0% | |
| !! | ACAAGGTTCTGGAAGTAACT+TGG | - | chr2_2:58595276-58595295 | None:intergenic | 40.0% |
| TGTTATGGAAGGGTTCTTTG+AGG | - | chr2_2:58595499-58595518 | None:intergenic | 40.0% | |
| CAATTGATCGAACTCTCCAT+CGG | - | chr2_2:58595596-58595615 | None:intergenic | 40.0% | |
| ! | TCAATTGCTTCTGCTACTTG+AGG | + | chr2_2:58595609-58595628 | Msa0260760:intron | 40.0% |
| ! | TCACCTCTTGAGCTAACTTT+TGG | + | chr2_2:58596008-58596027 | Msa0260760:intron | 40.0% |
| AAACTACAGAATTTGGGAGC+GGG | - | chr2_2:58596046-58596065 | None:intergenic | 40.0% | |
| AAGCTGCTGTGTGAAAACAT+TGG | - | chr2_2:58596115-58596134 | None:intergenic | 40.0% | |
| GTGTTGTCAATTGTGGAATG+CGG | - | chr2_2:58596275-58596294 | None:intergenic | 40.0% | |
| ! | TGAAGGATAAGCTTGGTCTT+TGG | + | chr2_2:58596464-58596483 | Msa0260760:CDS | 40.0% |
| GAATGAGGCTCCTTAATAAG+AGG | + | chr2_2:58596556-58596575 | Msa0260760:exon | 40.0% | |
| ATGAGGCTCCTTAATAAGAG+GGG | + | chr2_2:58596558-58596577 | Msa0260760:exon | 40.0% | |
| ! | GTGCTGGTGTACATACAAAT+TGG | + | chr2_2:58596623-58596642 | Msa0260760:three_prime_UTR | 40.0% |
| CTTTCTTTCAAGAGGGTGAA+GGG | - | chr2_2:58596693-58596712 | None:intergenic | 40.0% | |
| TCTTTCTTTCAAGAGGGTGA+AGG | - | chr2_2:58596694-58596713 | None:intergenic | 40.0% | |
| TGGGTGAATGTGTACGAAAG+GGG | - | chr2_2:58591126-58591145 | None:intergenic | 45.0% | |
| GTGGGTGAATGTGTACGAAA+GGG | - | chr2_2:58591127-58591146 | None:intergenic | 45.0% | |
| CAGAGTTTCGATGAAGGTTG+AGG | - | chr2_2:58591234-58591253 | None:intergenic | 45.0% | |
| TAGAACTGACACTGCTACAG+AGG | - | chr2_2:58591613-58591632 | None:intergenic | 45.0% | |
| TGTAGCAGTGTCAGTTCTAC+TGG | + | chr2_2:58591614-58591633 | Msa0260760:intron | 45.0% | |
| AGTGGTTAGGGTTTGAACCT+TGG | + | chr2_2:58591953-58591972 | Msa0260760:intron | 45.0% | |
| ! | TGCTGAGTTACTCTAAGGGT+TGG | - | chr2_2:58591989-58592008 | None:intergenic | 45.0% |
| CCGCGATCTATTGACAACAT+TGG | + | chr2_2:58592161-58592180 | Msa0260760:intron | 45.0% | |
| GCATCAACTTTCTCGGTATC+AGG | - | chr2_2:58592260-58592279 | None:intergenic | 45.0% | |
| GATAAAGTGGGACGAAAACC+AGG | + | chr2_2:58592479-58592498 | Msa0260760:CDS | 45.0% | |
| TCCCAATTCAACTGCAAGAC+TGG | + | chr2_2:58592733-58592752 | Msa0260760:CDS | 45.0% | |
| CCCAGTCTTGCAGTTGAATT+GGG | - | chr2_2:58592737-58592756 | None:intergenic | 45.0% | |
| CCCAATTCAACTGCAAGACT+GGG | + | chr2_2:58592734-58592753 | Msa0260760:CDS | 45.0% | |
| ACCCAGTCTTGCAGTTGAAT+TGG | - | chr2_2:58592738-58592757 | None:intergenic | 45.0% | |
| ! | CCGTGTTTTGTGTGGCTAAT+TGG | + | chr2_2:58593052-58593071 | Msa0260760:intron | 45.0% |
| AAATTGGTGCATCCACTGTC+TGG | + | chr2_2:58593264-58593283 | Msa0260760:intron | 45.0% | |
| TATGTCTCCAAACCAGACAG+TGG | - | chr2_2:58593279-58593298 | None:intergenic | 45.0% | |
| !! | ATCTGTTGGCTCTATAGCGA+AGG | + | chr2_2:58593489-58593508 | Msa0260760:CDS | 45.0% |
| !! | AGCGAAGGTATTTCAGGCAT+TGG | + | chr2_2:58593504-58593523 | Msa0260760:CDS | 45.0% |
| !! | GCGAAGGTATTTCAGGCATT+GGG | + | chr2_2:58593505-58593524 | Msa0260760:CDS | 45.0% |
| ! | GGCATTGGGAAGACTACTAT+TGG | + | chr2_2:58593519-58593538 | Msa0260760:CDS | 45.0% |
| ACTATTGGAACCTGTTGCAG+AGG | + | chr2_2:58593534-58593553 | Msa0260760:CDS | 45.0% | |
| AGGACCTGCGCTTATGTTAT+TGG | - | chr2_2:58594191-58594210 | None:intergenic | 45.0% | |
| !! | AGCGCAGGTCCTTTAAAGTT+TGG | + | chr2_2:58594199-58594218 | Msa0260760:intron | 45.0% |
| TTAAACCCTGAGTCTGCAGT+AGG | + | chr2_2:58594235-58594254 | Msa0260760:intron | 45.0% | |
| AATGTCCTACTGCAGACTCA+GGG | - | chr2_2:58594243-58594262 | None:intergenic | 45.0% | |
| ATGACTACCCACATGGTGTT+GGG | - | chr2_2:58594363-58594382 | None:intergenic | 45.0% | |
| GCATCATAGAGTGTAGCTTC+CGG | + | chr2_2:58594551-58594570 | Msa0260760:intron | 45.0% | |
| CATCATAGAGTGTAGCTTCC+GGG | + | chr2_2:58594552-58594571 | Msa0260760:intron | 45.0% | |
| ATCATAGAGTGTAGCTTCCG+GGG | + | chr2_2:58594553-58594572 | Msa0260760:intron | 45.0% | |
| ! | ATGCTACTTGACATGAGGCT+TGG | - | chr2_2:58594630-58594649 | None:intergenic | 45.0% |
| AGCCTCATGTCAAGTAGCAT+AGG | + | chr2_2:58594630-58594649 | Msa0260760:intron | 45.0% | |
| GGTGGAAAGTTTAAGTGGCT+TGG | + | chr2_2:58594659-58594678 | Msa0260760:intron | 45.0% | |
| !!! | CCCTCGATAGCTAGCTTTTA+AGG | + | chr2_2:58594689-58594708 | Msa0260760:intron | 45.0% |
| CCCTTAAAAGCTAGCTATCG+AGG | - | chr2_2:58594693-58594712 | None:intergenic | 45.0% | |
| GAAACCTAGAGCAGAATTGG+TGG | + | chr2_2:58594820-58594839 | Msa0260760:intron | 45.0% | |
| CTATCCACCAATTCTGCTCT+AGG | - | chr2_2:58594827-58594846 | None:intergenic | 45.0% | |
| CCAAACACACGATTAGTGAC+AGG | - | chr2_2:58595062-58595081 | None:intergenic | 45.0% | |
| CCTGTCACTAATCGTGTGTT+TGG | + | chr2_2:58595059-58595078 | Msa0260760:intron | 45.0% | |
| ! | GTTGGTGTTCTTGAAGGTTG+AGG | + | chr2_2:58595120-58595139 | Msa0260760:intron | 45.0% |
| ACGTAACTGTGCATTGCTCA+AGG | + | chr2_2:58595222-58595241 | Msa0260760:intron | 45.0% | |
| GCAGCAAGCATCATTCCAAT+AGG | - | chr2_2:58595650-58595669 | None:intergenic | 45.0% | |
| ! | CGCTAAAGCACTACTATAGC+TGG | - | chr2_2:58596217-58596236 | None:intergenic | 45.0% |
| CTATAGTAGTGCTTTAGCGC+TGG | + | chr2_2:58596218-58596237 | Msa0260760:intron | 45.0% | |
| CATGCAAGTTTGCCGATGAT+TGG | - | chr2_2:58596428-58596447 | None:intergenic | 45.0% | |
| CAATCATCGGCAAACTTGCA+TGG | + | chr2_2:58596426-58596445 | Msa0260760:CDS | 45.0% | |
| CTACTACCAACAATAGGTGC+TGG | + | chr2_2:58596607-58596626 | Msa0260760:three_prime_UTR | 45.0% | |
| TGTACACCAGCACCTATTGT+TGG | - | chr2_2:58596616-58596635 | None:intergenic | 45.0% | |
| GGGTGAATGTGTACGAAAGG+GGG | - | chr2_2:58591125-58591144 | None:intergenic | 50.0% | |
| GGTGGGTGAATGTGTACGAA+AGG | - | chr2_2:58591128-58591147 | None:intergenic | 50.0% | |
| TGACAACATTGGACCTCGCT+TGG | + | chr2_2:58592172-58592191 | Msa0260760:intron | 50.0% | |
| GCATTGTATCCTTTCACGCC+TGG | - | chr2_2:58592500-58592519 | None:intergenic | 50.0% | |
| GGGCGATATGTTTGCTCTTC+TGG | - | chr2_2:58592638-58592657 | None:intergenic | 50.0% | |
| AAAAGGAGCTCCTCTGCAAC+AGG | - | chr2_2:58593547-58593566 | None:intergenic | 50.0% | |
| GAATGTCCTACTGCAGACTC+AGG | - | chr2_2:58594244-58594263 | None:intergenic | 50.0% | |
| CAACTCTCCCAACACCATGT+GGG | + | chr2_2:58594353-58594372 | Msa0260760:intron | 50.0% | |
| GATGACTACCCACATGGTGT+TGG | - | chr2_2:58594364-58594383 | None:intergenic | 50.0% | |
| !! | AGCTTGGGAAAGGGTACCTA+TGG | + | chr2_2:58594501-58594520 | Msa0260760:intron | 50.0% |
| !! | TTGGGAAAGGGTACCTATGG+AGG | + | chr2_2:58594504-58594523 | Msa0260760:intron | 50.0% |
| !! | TGGGAAAGGGTACCTATGGA+GGG | + | chr2_2:58594505-58594524 | Msa0260760:intron | 50.0% |
| ! | GATGCTTTGTTCGGCCATTG+CGG | - | chr2_2:58594536-58594555 | None:intergenic | 50.0% |
| TCTCGGGCAGAGCTATGATA+GGG | + | chr2_2:58594584-58594603 | Msa0260760:intron | 50.0% | |
| GCAGAGCTATGATAGGGACT+TGG | + | chr2_2:58594590-58594609 | Msa0260760:intron | 50.0% | |
| GGGACAGTTTCATAAGGGCT+TGG | + | chr2_2:58594710-58594729 | Msa0260760:intron | 50.0% | |
| GTGTTCTTGAAGGTTGAGGG+AGG | + | chr2_2:58595124-58595143 | Msa0260760:intron | 50.0% | |
| ! | TAGGAGCACACTTGTTCCGA+TGG | + | chr2_2:58595577-58595596 | Msa0260760:intron | 50.0% |
| GATGAAGGTTGAGGCTTGCG+AGG | - | chr2_2:58591225-58591244 | None:intergenic | 55.0% | |
| GGGTTGGAGAATCAGCTCCA+AGG | - | chr2_2:58591973-58591992 | None:intergenic | 55.0% | |
| GTAGTTCAAGTGGCCAAGCG+AGG | - | chr2_2:58592188-58592207 | None:intergenic | 55.0% | |
| GGACGAAAACCAGGCGTGAA+AGG | + | chr2_2:58592488-58592507 | Msa0260760:CDS | 55.0% | |
| GGTGCATCCACTGTCTGGTT+TGG | + | chr2_2:58593269-58593288 | Msa0260760:intron | 55.0% | |
| ! | CCACATGGTGTTGGGAGAGT+TGG | - | chr2_2:58594355-58594374 | None:intergenic | 55.0% |
| CCAACTCTCCCAACACCATG+TGG | + | chr2_2:58594352-58594371 | Msa0260760:intron | 55.0% | |
| !! | GGGAAAGGGTACCTATGGAG+GGG | + | chr2_2:58594506-58594525 | Msa0260760:intron | 55.0% |
| ATTGCGGTCAACCCCTCCAT+AGG | - | chr2_2:58594520-58594539 | None:intergenic | 55.0% | |
| TATGGAGGGGTTGACCGCAA+TGG | + | chr2_2:58594519-58594538 | Msa0260760:intron | 55.0% | |
| AGTGTAGCTTCCGGGGACAT+CGG | + | chr2_2:58594560-58594579 | Msa0260760:intron | 55.0% | |
| CTCTCGGGCAGAGCTATGAT+AGG | + | chr2_2:58594583-58594602 | Msa0260760:intron | 55.0% | |
| !! | GTGCTTTAGCGCTGGCGTAA+TGG | + | chr2_2:58596226-58596245 | Msa0260760:intron | 55.0% |
| !! | TTGTCCAGTGCCGACACACG+TGG | + | chr2_2:58591723-58591742 | Msa0260760:intron | 60.0% |
| ! | GTAACCACGTGTGTCGGCAC+TGG | - | chr2_2:58591730-58591749 | None:intergenic | 60.0% |
| !! | CTTCCGGGGACATCGGCTCT+CGG | + | chr2_2:58594567-58594586 | Msa0260760:intron | 65.0% |
| !! | TTCCGGGGACATCGGCTCTC+GGG | + | chr2_2:58594568-58594587 | Msa0260760:intron | 65.0% |
| TGCCCGAGAGCCGATGTCCC+CGG | - | chr2_2:58594573-58594592 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 58590984 | 58596842 | 58590984 | ID=Msa0260760;Name=Msa0260760 |
| chr2_2 | mRNA | 58590984 | 58596842 | 58590984 | ID=Msa0260760-mRNA-1;Parent=Msa0260760;Name=Msa0260760-mRNA-1;_AED=0.12;_eAED=0.12;_QI=104|0.6|0.83|1|1|1|6|281|406 |
| chr2_2 | exon | 58590984 | 58591259 | 58590984 | ID=Msa0260760-mRNA-1:exon:18029;Parent=Msa0260760-mRNA-1 |
| chr2_2 | exon | 58591464 | 58591511 | 58591464 | ID=Msa0260760-mRNA-1:exon:18030;Parent=Msa0260760-mRNA-1 |
| chr2_2 | exon | 58592273 | 58592863 | 58592273 | ID=Msa0260760-mRNA-1:exon:18031;Parent=Msa0260760-mRNA-1 |
| chr2_2 | exon | 58593404 | 58593583 | 58593404 | ID=Msa0260760-mRNA-1:exon:18032;Parent=Msa0260760-mRNA-1 |
| chr2_2 | exon | 58593899 | 58593963 | 58593899 | ID=Msa0260760-mRNA-1:exon:18033;Parent=Msa0260760-mRNA-1 |
| chr2_2 | exon | 58596397 | 58596842 | 58596397 | ID=Msa0260760-mRNA-1:exon:18034;Parent=Msa0260760-mRNA-1 |
| chr2_2 | five_prime_UTR | 58590984 | 58591087 | 58590984 | ID=Msa0260760-mRNA-1:five_prime_utr;Parent=Msa0260760-mRNA-1 |
| chr2_2 | CDS | 58591088 | 58591259 | 58591088 | ID=Msa0260760-mRNA-1:cds;Parent=Msa0260760-mRNA-1 |
| chr2_2 | CDS | 58591464 | 58591511 | 58591464 | ID=Msa0260760-mRNA-1:cds;Parent=Msa0260760-mRNA-1 |
| chr2_2 | CDS | 58592273 | 58592863 | 58592273 | ID=Msa0260760-mRNA-1:cds;Parent=Msa0260760-mRNA-1 |
| chr2_2 | CDS | 58593404 | 58593583 | 58593404 | ID=Msa0260760-mRNA-1:cds;Parent=Msa0260760-mRNA-1 |
| chr2_2 | CDS | 58593899 | 58593963 | 58593899 | ID=Msa0260760-mRNA-1:cds;Parent=Msa0260760-mRNA-1 |
| chr2_2 | CDS | 58596397 | 58596561 | 58596397 | ID=Msa0260760-mRNA-1:cds;Parent=Msa0260760-mRNA-1 |
| chr2_2 | three_prime_UTR | 58596562 | 58596842 | 58596562 | ID=Msa0260760-mRNA-1:three_prime_utr;Parent=Msa0260760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
