AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0366240


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0366240 MtrunA17_Chr3g0107041 89.307 664 55 4 1 648 1 664 0.0 1104
Msa0366240 MtrunA17_Chr3g0139461 45.098 102 51 1 460 556 86 187 7.13e-16 79.0
Msa0366240 MtrunA17_Chr4g0047261 54.167 72 33 0 488 559 118 189 4.41e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0366240 AT5G58370.3 68.590 312 76 6 354 648 158 464 3.65e-139 414
Msa0366240 AT5G58370.2 68.590 312 76 6 354 648 158 464 3.65e-139 414
Msa0366240 AT5G58370.1 67.474 289 72 6 354 625 158 441 3.94e-125 378
Msa0366240 AT5G11480.1 56.757 74 32 0 483 556 131 204 1.60e-17 84.7
Msa0366240 AT2G22870.1 40.517 116 63 1 442 557 81 190 3.28e-16 80.5

Find 164 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAACCTTTGTTTAAGAAAA+AGG 0.153434 3_1:-60810283 Msa0366240:CDS
GAGAGAGGTGATAGAGAAAA+TGG 0.190882 3_1:-60810828 Msa0366240:CDS
TTGATTTGAAAGCTTCTTCT+TGG 0.213092 3_1:+60810173 None:intergenic
TGATAGGGAAAATGGGTTTA+AGG 0.213891 3_1:-60810667 Msa0366240:CDS
ACATAAATTAATGGCTAAAA+AGG 0.234227 3_1:+60804901 None:intergenic
GGCGCATGATAGAAATAAAA+AGG 0.238071 3_1:-60808491 Msa0366240:CDS
TGATAGGGAAAATGGGTATA+AGG 0.275651 3_1:-60810493 Msa0366240:CDS
TGGGCGTTCTGAGACATTTC+AGG 0.280707 3_1:+60808680 None:intergenic
TGATAGAGAAAATGGGTATA+AGG 0.292592 3_1:-60810820 Msa0366240:CDS
AGTTAATTAACATAAATTAA+TGG 0.292838 3_1:+60804892 None:intergenic
AAGGAAAGGTGAAAACTTCT+AGG 0.295015 3_1:-60810569 Msa0366240:CDS
CTTAAACAAAGGTTTCTTCT+TGG 0.296646 3_1:+60810290 None:intergenic
TAGGCTGTATTGCACGGAAT+TGG 0.304754 3_1:+60808660 None:intergenic
GAAATTCTTACACCAACTTT+AGG 0.305893 3_1:+60811044 None:intergenic
GATGATTCCATTGCCGTTGA+TGG 0.314541 3_1:-60809955 Msa0366240:intron
GTCAAATAAAGGATATAATA+AGG 0.318173 3_1:-60806209 Msa0366240:intron
TTAGTTGATTTGCCAGGATA+TGG 0.322044 3_1:-60807847 Msa0366240:CDS
GCACGTCGCGCCACATCAAT+TGG 0.323406 3_1:+60806556 None:intergenic
TATTCCTACGTGGTGTCTTC+AGG 0.327088 3_1:+60804996 None:intergenic
AGAGACGTGCCACTTAAAAT+TGG 0.331252 3_1:+60804949 None:intergenic
ATAAATTGAACCATTGGAAT+TGG 0.341205 3_1:+60804766 None:intergenic
GTATGGATCGATTAACATAA+AGG 0.341656 3_1:+60807469 None:intergenic
AAGAGAAATGAAGAGTTTAG+AGG 0.354265 3_1:-60810891 Msa0366240:CDS
CCCTTCAATACTTACCTTTG+TGG 0.354751 3_1:-60808636 Msa0366240:CDS
GTAACAGATGAATGGTTTAG+AGG 0.357518 3_1:-60811002 Msa0366240:CDS
CTTCCGGAGATTGCATTTGC+TGG 0.361097 3_1:-60808210 Msa0366240:intron
GATAGAGAAAATGGGTATAA+GGG 0.364549 3_1:-60810819 Msa0366240:CDS
GAATTTGACTTTGGACTGAA+TGG 0.372802 3_1:-60804628 Msa0366240:three_prime_UTR
CTGTCTTGGTTAATACTATC+TGG 0.385303 3_1:+60806590 None:intergenic
CCGATGATGAACGTACAATC+TGG 0.385844 3_1:-60810224 Msa0366240:CDS
ATCATTACAGTGGTGCTATC+TGG 0.387229 3_1:-60804699 Msa0366240:three_prime_UTR
CTCTTGTTTGAGATATCATA+TGG 0.387910 3_1:+60809982 None:intergenic
AAGAAAAGGGCGAACTTTAG+AGG 0.390337 3_1:-60810636 Msa0366240:CDS
AGGCTGTATTGCACGGAATT+GGG 0.391617 3_1:+60808661 None:intergenic
AAGTTGGTGTAAGAATTTCT+AGG 0.392721 3_1:-60811040 Msa0366240:CDS
GAACGTACAATCTGGGATTT+CGG 0.397533 3_1:-60810216 Msa0366240:CDS
GATAGGGAAAATGGGTATAA+GGG 0.397826 3_1:-60810492 Msa0366240:CDS
GACAATAAACTTCTTCAACT+TGG 0.401509 3_1:-60807884 Msa0366240:CDS
TAGCTCGATTTGTCAAATAA+AGG 0.402383 3_1:-60806220 Msa0366240:exon
GATAGGGAAAATGGGTTTAA+GGG 0.402625 3_1:-60810666 Msa0366240:CDS
GAGAAGGGAATATTATCTAA+TGG 0.405851 3_1:+60808441 None:intergenic
TCTTGTCAAGAATTTGACTT+TGG 0.406978 3_1:-60804637 Msa0366240:three_prime_UTR
TTCATGGGATGTGGGTTTGT+AGG 0.408746 3_1:-60804734 Msa0366240:three_prime_UTR
AGAAGTGAAGGAGAAGAAAA+AGG 0.411340 3_1:-60808717 Msa0366240:CDS
TTCTTCTATGTTCTCTCTGT+CGG 0.411627 3_1:+60808410 None:intergenic
TAATGCACTTACTAGGCAAT+GGG 0.414835 3_1:-60808043 Msa0366240:CDS
GCTCCTCTCTTCACCCGATT+CGG 0.415729 3_1:+60810764 None:intergenic
CTCTTCTTAATGCACTTACT+AGG 0.417541 3_1:-60808050 Msa0366240:CDS
TCCACAAAGGTAAGTATTGA+AGG 0.423833 3_1:+60808635 None:intergenic
ATTGGTTGGCCGGTGAGGTT+AGG 0.427256 3_1:+60804784 None:intergenic
TTTCTACATGCTTACTGCAT+TGG 0.427808 3_1:-60804809 Msa0366240:three_prime_UTR
AAAATGATGATAGAGGAAAT+AGG 0.428838 3_1:-60810929 Msa0366240:CDS
CTTATCTCCTGATCATTGTA+TGG 0.436630 3_1:+60807452 None:intergenic
ACAATAAACTTCTTCAACTT+GGG 0.440946 3_1:-60807883 Msa0366240:CDS
TATGGATCGATTAACATAAA+GGG 0.440988 3_1:+60807470 None:intergenic
GACTTTGGAGGAACCGAATC+GGG 0.442139 3_1:-60810777 Msa0366240:CDS
ATGAAGAAAAGGGTGGACTT+TGG 0.442859 3_1:-60810792 Msa0366240:CDS
AATGCAATCTCCGGAAGATT+AGG 0.443410 3_1:+60808216 None:intergenic
CGCCACATCAATTGGGAAAA+CGG 0.454633 3_1:+60806564 None:intergenic
GGACTTTGGAGGAACCGAAT+CGG 0.454928 3_1:-60810778 Msa0366240:CDS
GTTCCCTTGGTCAAATAGAA+TGG 0.462313 3_1:-60804855 Msa0366240:three_prime_UTR
ATTTCCACCTCCTAATCTTC+CGG 0.464029 3_1:-60808226 Msa0366240:CDS
GGTTGAATTACAGACTTGTT+CGG 0.468286 3_1:+60806420 None:intergenic
ATAATAATAAATTGAACCAT+TGG 0.468960 3_1:+60804760 None:intergenic
TGGAGGAAAGCGAGAAATCA+TGG 0.472213 3_1:-60810329 Msa0366240:CDS
AGGGAAGGTGAGAAGTAGAA+AGG 0.472773 3_1:-60810721 Msa0366240:CDS
GAATGGAGTCGGGTGAAGAA+AGG 0.476460 3_1:-60810440 Msa0366240:CDS
ATGATGGCTAGCTCAAAATC+TGG 0.477405 3_1:-60806281 Msa0366240:CDS
AGGGTATATGCTAATGAGGA+AGG 0.480759 3_1:-60810354 Msa0366240:CDS
AATTATAATTCACAGCTGTT+GGG 0.481687 3_1:-60808519 Msa0366240:intron
TGGGAAAACGGTATCTGTCT+TGG 0.484355 3_1:+60806576 None:intergenic
CTAGAATTGTAACAGATGAA+TGG 0.487263 3_1:-60811010 Msa0366240:CDS
AGAGAGGTGATAGAGAAAAT+GGG 0.489685 3_1:-60810827 Msa0366240:CDS
AATCGATCCATACAATGATC+AGG 0.491477 3_1:-60807459 Msa0366240:CDS
CTTAGCTTAGTTGATTTGCC+AGG 0.491612 3_1:-60807853 Msa0366240:CDS
ATAATTCACAGCTGTTGGGC+AGG 0.491671 3_1:-60808515 Msa0366240:intron
GAATGGAATCGGGTGAAGAA+AGG 0.493181 3_1:-60810614 Msa0366240:CDS
ATGCAGTAAGCATGTAGAAA+AGG 0.494854 3_1:+60804812 None:intergenic
GAACCTAGAATACCTGTGTA+TGG 0.495616 3_1:+60807992 None:intergenic
TTAAGGGGAAAATGAAGAAA+AGG 0.496031 3_1:-60810650 Msa0366240:CDS
AGAGGTGAAAATGATGATAG+AGG 0.496628 3_1:-60810936 Msa0366240:CDS
CATACAATGATCAGGAGATA+AGG 0.496930 3_1:-60807451 Msa0366240:intron
AACTTTAAAGGAATGGAGTC+GGG 0.498142 3_1:-60810450 Msa0366240:CDS
ATAAGGGGAAGATGAAGAAA+AGG 0.498161 3_1:-60810803 Msa0366240:CDS
CACGTCGCGCCACATCAATT+GGG 0.502582 3_1:+60806557 None:intergenic
AGAAGAAAGTTTCATGAGAG+AGG 0.504166 3_1:-60810954 Msa0366240:CDS
TGGTGAGAAGTTTCATGAGA+GGG 0.504406 3_1:-60810415 Msa0366240:CDS
AACTTTAGAGGAATGGAATC+GGG 0.504644 3_1:-60810624 Msa0366240:CDS
TTAATGCACTTACTAGGCAA+TGG 0.507430 3_1:-60808044 Msa0366240:CDS
GAAGAGGGTATATGCTAATG+AGG 0.507461 3_1:-60810358 Msa0366240:CDS
GAACTTTAGAGGAATGGAAT+CGG 0.508233 3_1:-60810625 Msa0366240:CDS
AAAGTCAAATTCTTGACAAG+AGG 0.510013 3_1:+60804639 None:intergenic
AAATGTGAACTTTAAAGGAA+TGG 0.510729 3_1:-60810457 Msa0366240:CDS
GCTTTCAAATCAAAGTTTGA+AGG 0.510875 3_1:-60810163 Msa0366240:CDS
CAAGTCTGTAATTCAACCTC+TGG 0.514102 3_1:-60806415 Msa0366240:intron
GCATACGCAAATCCATATCC+TGG 0.515239 3_1:+60807835 None:intergenic
AGACGAAGTGAAAGAAGCTT+GGG 0.515480 3_1:-60807809 Msa0366240:CDS
TTAGCATCATCCTCCAACCC+TGG 0.515913 3_1:+60810057 None:intergenic
GAAGGTGAGAGATGAGACTG+TGG 0.519033 3_1:-60810256 Msa0366240:CDS
TTCAGGAAGTACAGAAGTGA+AGG 0.519553 3_1:-60808729 Msa0366240:intron
ATTGAACCATTGGAATTGGT+TGG 0.520414 3_1:+60804770 None:intergenic
AGAAGTAGAAAGGATGAGAG+TGG 0.521025 3_1:-60810711 Msa0366240:CDS
AAGACGAAGTGAAAGAAGCT+TGG 0.522199 3_1:-60807810 Msa0366240:CDS
CCAGATTGTACGTTCATCAT+CGG 0.525608 3_1:+60810224 None:intergenic
AAGGGCGAACTTTAGAGGAA+TGG 0.528229 3_1:-60810631 Msa0366240:CDS
GTGGTGAGAAGTTTCATGAG+AGG 0.529068 3_1:-60810416 Msa0366240:CDS
GGATTTCGGTAAATTGAAGC+AGG 0.529223 3_1:-60810202 Msa0366240:CDS
CCACAAAGGTAAGTATTGAA+GGG 0.529256 3_1:+60808636 None:intergenic
TGATACAATGCATACTTACA+AGG 0.531936 3_1:+60807782 None:intergenic
TTTGACAAATCGAGCTACGC+TGG 0.535258 3_1:+60806226 None:intergenic
AGGAAAGGTGAAAACTTCTA+GGG 0.536249 3_1:-60810568 Msa0366240:CDS
ATACCAGCAAATGCAATCTC+CGG 0.538333 3_1:+60808207 None:intergenic
TAGAATACCTGTGTATGGCC+AGG 0.542553 3_1:+60807997 None:intergenic
GTACGGACATCGGACAAGCC+TGG 0.543313 3_1:-60808015 Msa0366240:CDS
GCTAGCTCAAAATCTGGAGC+AGG 0.546793 3_1:-60806275 Msa0366240:CDS
CGATGATGAACGTACAATCT+GGG 0.549324 3_1:-60810223 Msa0366240:CDS
ATACGTACCATCAACGGCAA+TGG 0.550137 3_1:+60809948 None:intergenic
GGTGAGAAGTTTCATGAGAG+GGG 0.551722 3_1:-60810414 Msa0366240:CDS
AAGAAAAGGGTGGACTTTGG+AGG 0.552587 3_1:-60810789 Msa0366240:CDS
AAGGTAAGTATTGAAGGGCT+AGG 0.555476 3_1:+60808641 None:intergenic
CTAACAGGAAAGTCAAATGT+TGG 0.557214 3_1:-60808081 Msa0366240:intron
ATTCACCTCTTCGATTTGCA+TGG 0.557235 3_1:+60806534 None:intergenic
AGAGGAAATGAAGAAAAGAG+TGG 0.559097 3_1:-60810984 Msa0366240:CDS
GGAATATTATCTAATGGCAT+AGG 0.565864 3_1:+60808447 None:intergenic
AACCATTGGAATTGGTTGGC+CGG 0.566185 3_1:+60804774 None:intergenic
TAAGGGGAAAATGAAGAAAA+GGG 0.566671 3_1:-60810649 Msa0366240:CDS
ATGCACTTACTAGGCAATGG+GGG 0.573347 3_1:-60808041 Msa0366240:CDS
GATAAAATACGTACCATCAA+CGG 0.576025 3_1:+60809942 None:intergenic
TTGGAATTGGTTGGCCGGTG+AGG 0.581584 3_1:+60804779 None:intergenic
TGCTAATGAGGAAGGAGTGG+AGG 0.585975 3_1:-60810346 Msa0366240:CDS
ATAGGGAAAATGGGTTTAAG+GGG 0.588027 3_1:-60810665 Msa0366240:CDS
GAACTTTAAAGGAATGGAGT+CGG 0.588561 3_1:-60810451 Msa0366240:CDS
ATAGAGAAAATGGGTATAAG+GGG 0.591187 3_1:-60810818 Msa0366240:CDS
CTACCATTCTATTTGACCAA+GGG 0.592565 3_1:+60804852 None:intergenic
GCAATCTCCGGAAGATTAGG+AGG 0.592767 3_1:+60808219 None:intergenic
TAAGGGGAAGATGAAGAAAA+GGG 0.595901 3_1:-60810802 Msa0366240:CDS
ATTCACAGCTGTTGGGCAGG+AGG 0.597657 3_1:-60808512 Msa0366240:intron
AGAAATGAAGAGTTTAGAGG+AGG 0.602155 3_1:-60810888 Msa0366240:CDS
ATATGCTAATGAGGAAGGAG+TGG 0.604765 3_1:-60810349 Msa0366240:CDS
TAAGCATGTAGAAAAGGAGT+GGG 0.607849 3_1:+60804818 None:intergenic
TTGGACTGAATGGTATACAT+AGG 0.610100 3_1:-60804618 Msa0366240:three_prime_UTR
ATCTCCGGAAGATTAGGAGG+TGG 0.612926 3_1:+60808222 None:intergenic
CACCGGCCAACCAATTCCAA+TGG 0.613268 3_1:-60804776 Msa0366240:three_prime_UTR
AAGGGCTAGGCTGTATTGCA+CGG 0.613549 3_1:+60808654 None:intergenic
GACTGAATGGTATACATAGG+TGG 0.614874 3_1:-60804615 Msa0366240:three_prime_UTR
GAACCGAATCGGGTGAAGAG+AGG 0.615316 3_1:-60810767 Msa0366240:CDS
CGAAGTGAAAGAAGCTTGGG+AGG 0.617961 3_1:-60807806 Msa0366240:CDS
GGGGAAGATGAAGAAAAGGG+TGG 0.621693 3_1:-60810799 Msa0366240:CDS
ATAGGGAAAATGGGTATAAG+GGG 0.628936 3_1:-60810491 Msa0366240:CDS
GCTACCATTCTATTTGACCA+AGG 0.630478 3_1:+60804851 None:intergenic
TGCACTTACTAGGCAATGGG+GGG 0.636970 3_1:-60808040 Msa0366240:CDS
GGACAAGCCTGGCCATACAC+AGG 0.644075 3_1:-60808004 Msa0366240:intron
ACGTGCCATGCAAATCGAAG+AGG 0.659942 3_1:-60806539 Msa0366240:intron
TTGAAGCATTATGTCTACTG+AGG 0.660792 3_1:-60811096 None:intergenic
GTAAGCATGTAGAAAAGGAG+TGG 0.662785 3_1:+60804817 None:intergenic
GCATTGGTACCTAACCTCAC+CGG 0.670461 3_1:-60804793 Msa0366240:three_prime_UTR
GAGTCGGGTGAAGAAAGGAG+TGG 0.672197 3_1:-60810435 Msa0366240:CDS
GAATCGGGTGAAGAAAGGAG+TGG 0.684828 3_1:-60810609 Msa0366240:CDS
GAAAGCGAGAAATCATGGAG+TGG 0.697161 3_1:-60810324 Msa0366240:CDS
AAGCATGAACATCATTACAG+TGG 0.707650 3_1:-60804709 Msa0366240:three_prime_UTR
AATGCACTTACTAGGCAATG+GGG 0.710117 3_1:-60808042 Msa0366240:CDS
GAATCGGGTGAAGAGAGGAG+CGG 0.735926 3_1:-60810762 Msa0366240:CDS
AACATGTCATTATTCCTACG+TGG 0.751587 3_1:+60804986 None:intergenic
TACACCTGAAGACACCACGT+AGG 0.776373 3_1:-60805000 Msa0366240:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTAATTAACATAAATTAA+TGG + chr3_1:60810812-60810831 None:intergenic 10.0%
!!! TTAAAAAAATTGGATTCTTT+TGG - chr3_1:60805314-60805333 Msa0366240:intron 15.0%
!!! TAAAAAAATTGGATTCTTTT+GGG - chr3_1:60805315-60805334 Msa0366240:intron 15.0%
!! TTTAATTCCAAATAATTCAA+TGG - chr3_1:60805887-60805906 Msa0366240:intron 15.0%
!! TGAAGTATAAAACAAATTTA+CGG + chr3_1:60806050-60806069 None:intergenic 15.0%
!! AAAACAATATATAGTTTCTA+TGG + chr3_1:60808293-60808312 None:intergenic 15.0%
!! AATGTAAATGAATATAAAAC+CGG + chr3_1:60808536-60808555 None:intergenic 15.0%
!! TATTATTGTTGACATATTTA+AGG - chr3_1:60808565-60808584 Msa0366240:intron 15.0%
!! AGGAAAAAAAATAAAATAGA+AGG + chr3_1:60809015-60809034 None:intergenic 15.0%
!!! CTATTTTATTTTTTTTCCTT+CGG - chr3_1:60809016-60809035 Msa0366240:intron 15.0%
!! TTAATTTATAGGGAAAAAAA+AGG + chr3_1:60809207-60809226 None:intergenic 15.0%
!! AAAAAGAACGTTAATTTATA+GGG + chr3_1:60809217-60809236 None:intergenic 15.0%
!! AAAAAAGAACGTTAATTTAT+AGG + chr3_1:60809218-60809237 None:intergenic 15.0%
!!! TATAAATTAACGTTCTTTTT+TGG - chr3_1:60809217-60809236 Msa0366240:intron 15.0%
!! ATAATAATAAATTGAACCAT+TGG + chr3_1:60810944-60810963 None:intergenic 15.0%
!! ATTAGAAAAAATCCTAAAGT+TGG - chr3_1:60804645-60804664 Msa0366240:three_prime_UTR 20.0%
!! AAGAAAAATGTGAACTTTAA+AGG - chr3_1:60805239-60805258 Msa0366240:intron 20.0%
!! ATAAACACCATTGAATTATT+TGG + chr3_1:60805897-60805916 None:intergenic 20.0%
!!! AGATAAATTTAGTATCGATA+TGG - chr3_1:60806147-60806166 Msa0366240:intron 20.0%
!!! AAGCTTTATGTATATTAAAC+TGG - chr3_1:60806313-60806332 Msa0366240:intron 20.0%
!!! AGCTTTATGTATATTAAACT+GGG - chr3_1:60806314-60806333 Msa0366240:intron 20.0%
!! AAATCAGATGTTTAACATTT+GGG + chr3_1:60806726-60806745 None:intergenic 20.0%
!!! AATTACATTTTTTTCCACAA+AGG + chr3_1:60807082-60807101 None:intergenic 20.0%
!!! ACTATATATTGTTTTGTTGT+CGG - chr3_1:60808298-60808317 Msa0366240:intron 20.0%
!!! TCTTTTGATTGATACAAAAT+GGG - chr3_1:60808720-60808739 Msa0366240:CDS 20.0%
!!! TGGTTATGTTTTTAAAACAT+AGG + chr3_1:60808822-60808841 None:intergenic 20.0%
!!! TTTTAAAAACTATATCGAAC+TGG + chr3_1:60808981-60809000 None:intergenic 20.0%
!! TGATCACTGAATTTATTTAA+TGG - chr3_1:60809056-60809075 Msa0366240:intron 20.0%
!! GTCAAATAAAGGATATAATA+AGG - chr3_1:60809492-60809511 Msa0366240:intron 20.0%
!!! TAACTTTTCTTCTTAACTAT+TGG - chr3_1:60809736-60809755 Msa0366240:intron 20.0%
!! ATAAGTGCATATGTTAATAA+AGG + chr3_1:60809815-60809834 None:intergenic 20.0%
!! CTCAAATAAATTAATCCATA+CGG - chr3_1:60810037-60810056 Msa0366240:CDS 20.0%
!!! TTTTGATATCCAATTTTAAG+TGG - chr3_1:60810743-60810762 Msa0366240:CDS 20.0%
!! ACATAAATTAATGGCTAAAA+AGG + chr3_1:60810803-60810822 None:intergenic 20.0%
! AAAATGATGATAGAGGAAAT+AGG - chr3_1:60804772-60804791 Msa0366240:three_prime_UTR 25.0%
!! AAATGTGAACTTTAAAGGAA+TGG - chr3_1:60805244-60805263 Msa0366240:intron 25.0%
!! GAAACCTTTGTTTAAGAAAA+AGG - chr3_1:60805418-60805437 Msa0366240:intron 25.0%
!! TTCTCCTTTTTCTTAAACAA+AGG + chr3_1:60805425-60805444 None:intergenic 25.0%
!! TTTTTCATGTCAGATTTTGA+AGG + chr3_1:60805623-60805642 None:intergenic 25.0%
!! ACCCTTTTCTTTTTCTTAAA+GGG + chr3_1:60805686-60805705 None:intergenic 25.0%
! AATCATACATCTACAACAAA+AGG + chr3_1:60805869-60805888 None:intergenic 25.0%
!!! TATGAATGGGTTAAAAGATA+TGG - chr3_1:60806093-60806112 Msa0366240:intron 25.0%
!! TTGGTAGTATGAACAAATTA+CGG - chr3_1:60806120-60806139 Msa0366240:intron 25.0%
! TGAAATTATACTCACTAGAA+AGG + chr3_1:60806196-60806215 None:intergenic 25.0%
!!! CGAATATGATTTGTTTTCTT+AGG - chr3_1:60806401-60806420 Msa0366240:intron 25.0%
! CAAATCAGATGTTTAACATT+TGG + chr3_1:60806727-60806746 None:intergenic 25.0%
! GATAAAAGAATTCACAGAAA+AGG - chr3_1:60806777-60806796 Msa0366240:intron 25.0%
! AACTTAAGGAATCAAATTCA+AGG + chr3_1:60806949-60806968 None:intergenic 25.0%
! TGATTCCTTAAGTTAATTTC+AGG - chr3_1:60806955-60806974 Msa0366240:intron 25.0%
! TACTTCCTGAAATTAACTTA+AGG + chr3_1:60806963-60806982 None:intergenic 25.0%
! TTAATGCATCATTTACTTGA+AGG - chr3_1:60807138-60807157 Msa0366240:intron 25.0%
! GTGAATTATAATTAGAGTAC+AGG + chr3_1:60807175-60807194 None:intergenic 25.0%
! TAATTATAATTCACAGCTGT+TGG - chr3_1:60807181-60807200 Msa0366240:intron 25.0%
! AATTATAATTCACAGCTGTT+GGG - chr3_1:60807182-60807201 Msa0366240:intron 25.0%
!!! GTCGTTTTGAATGTAATAAA+CGG + chr3_1:60807328-60807347 None:intergenic 25.0%
! TTCTTTAATGTTGATACATG+TGG - chr3_1:60807729-60807748 Msa0366240:intron 25.0%
! ACAATAAACTTCTTCAACTT+GGG - chr3_1:60807818-60807837 Msa0366240:CDS 25.0%
! CAAAAGATATTGAATTCTCA+GGG + chr3_1:60808032-60808051 None:intergenic 25.0%
! TATGGATCGATTAACATAAA+GGG + chr3_1:60808234-60808253 None:intergenic 25.0%
!!! CTATATATTGTTTTGTTGTC+GGG - chr3_1:60808299-60808318 Msa0366240:intron 25.0%
!!! TATATATTGTTTTGTTGTCG+GGG - chr3_1:60808300-60808319 Msa0366240:intron 25.0%
!!! CTCTTCTATATGGTTTTATA+TGG - chr3_1:60808386-60808405 Msa0366240:intron 25.0%
! TATGTCAACAATAATACATG+AGG + chr3_1:60808561-60808580 None:intergenic 25.0%
! TTGTTGACATATTTAAGGAT+TGG - chr3_1:60808570-60808589 Msa0366240:intron 25.0%
!!! AAACCACTAATTTTAGGTAA+AGG - chr3_1:60808660-60808679 Msa0366240:CDS 25.0%
!!! GTCTTTTGATTGATACAAAA+TGG - chr3_1:60808719-60808738 Msa0366240:CDS 25.0%
!!! CTTTTGATTGATACAAAATG+GGG - chr3_1:60808721-60808740 Msa0366240:CDS 25.0%
!!! TTTTTAAAACATAGGTTGCA+GGG + chr3_1:60808814-60808833 None:intergenic 25.0%
!!! AAAAAAGTGTCCTCTTTATT+TGG + chr3_1:60809616-60809635 None:intergenic 25.0%
!!! TTAAGTTGATTATCCAAACA+AGG + chr3_1:60809787-60809806 None:intergenic 25.0%
!! TAGCTAATAAAAACAGCTTT+TGG + chr3_1:60809908-60809927 None:intergenic 25.0%
! ATTGACATAAAACAATTGTG+AGG + chr3_1:60810010-60810029 None:intergenic 25.0%
! TTAGATTAAACGGTTAACTA+AGG + chr3_1:60810091-60810110 None:intergenic 25.0%
!! ATGATTACATGAGTTTTTAC+TGG + chr3_1:60810451-60810470 None:intergenic 25.0%
! GTAATCATCTTGTTAATGTA+TGG - chr3_1:60810463-60810482 Msa0366240:CDS 25.0%
! ATATTGAACTACTCTCAAAA+GGG + chr3_1:60810529-60810548 None:intergenic 25.0%
! ATAAAAATTGTGATTGATGG+AGG + chr3_1:60810568-60810587 None:intergenic 25.0%
! GTCATAAAAATTGTGATTGA+TGG + chr3_1:60810571-60810590 None:intergenic 25.0%
! TTATAGAAAGCAATGAAACA+TGG + chr3_1:60810620-60810639 None:intergenic 25.0%
! GGCTAAAAAGGTAATTAAAA+TGG + chr3_1:60810791-60810810 None:intergenic 25.0%
! ATAAATTGAACCATTGGAAT+TGG + chr3_1:60810938-60810957 None:intergenic 25.0%
!! TATTATATTTTCATGGGATG+TGG - chr3_1:60810958-60810977 Msa0366240:CDS 25.0%
!! ATTATATTTTCATGGGATGT+GGG - chr3_1:60810959-60810978 Msa0366240:CDS 25.0%
GAAATTCTTACACCAACTTT+AGG + chr3_1:60804660-60804679 None:intergenic 30.0%
!! AAGTTGGTGTAAGAATTTCT+AGG - chr3_1:60804661-60804680 Msa0366240:three_prime_UTR 30.0%
CTAGAATTGTAACAGATGAA+TGG - chr3_1:60804691-60804710 Msa0366240:three_prime_UTR 30.0%
AAGAGAAATGAAGAGTTTAG+AGG - chr3_1:60804810-60804829 Msa0366240:three_prime_UTR 30.0%
!! AGAAGAAAGTTTTATGAGAG+AGG - chr3_1:60804858-60804877 Msa0366240:three_prime_UTR 30.0%
TGATAGAGAAAATGGGTATA+AGG - chr3_1:60804881-60804900 Msa0366240:three_prime_UTR 30.0%
GATAGAGAAAATGGGTATAA+GGG - chr3_1:60804882-60804901 Msa0366240:three_prime_UTR 30.0%
ATAGAGAAAATGGGTATAAG+GGG - chr3_1:60804883-60804902 Msa0366240:three_prime_UTR 30.0%
! ACAGTTTTTGATAGGGAAAA+TGG - chr3_1:60805026-60805045 Msa0366240:three_prime_UTR 30.0%
! CAGTTTTTGATAGGGAAAAT+GGG - chr3_1:60805027-60805046 Msa0366240:three_prime_UTR 30.0%
TTAAGGGGAAAATGAAGAAA+AGG - chr3_1:60805051-60805070 Msa0366240:intron 30.0%
TAAGGGGAAAATGAAGAAAA+GGG - chr3_1:60805052-60805071 Msa0366240:intron 30.0%
!! GAAGTTTTATGAGAAAGGAA+AGG - chr3_1:60805118-60805137 Msa0366240:intron 30.0%
!! TGATGAGAATCGTTTTAACA+AGG - chr3_1:60805175-60805194 Msa0366240:intron 30.0%
! TGGTTTTTGATAGGGAAAAT+GGG - chr3_1:60805201-60805220 Msa0366240:intron 30.0%
GAGGGGAAAGTTAAAAAAAT+TGG - chr3_1:60805304-60805323 Msa0366240:intron 30.0%
! AAAAATTGGATTCTTTTGGG+AGG - chr3_1:60805318-60805337 Msa0366240:intron 30.0%
CTTAAACAAAGGTTTCTTCT+TGG + chr3_1:60805414-60805433 None:intergenic 30.0%
GTTTAAGAAAAAGGAGAAGA+AGG - chr3_1:60805427-60805446 Msa0366240:intron 30.0%
! TTGATTTGAAAGCTTCTTCT+TGG + chr3_1:60805531-60805550 None:intergenic 30.0%
GCTTTCAAATCAAAGTTTGA+AGG - chr3_1:60805538-60805557 Msa0366240:intron 30.0%
AAATCTGACATGAAAAAACC+AGG - chr3_1:60805626-60805645 Msa0366240:intron 30.0%
AATCTGACATGAAAAAACCA+GGG - chr3_1:60805627-60805646 Msa0366240:intron 30.0%
! CCCTTTTCTTTTTCTTAAAG+GGG + chr3_1:60805685-60805704 None:intergenic 30.0%
! CCCCTTTAAGAAAAAGAAAA+GGG - chr3_1:60805682-60805701 Msa0366240:intron 30.0%
! CACCCTTTTCTTTTTCTTAA+AGG + chr3_1:60805687-60805706 None:intergenic 30.0%
! CTCTTGTTTGAGATATCATA+TGG + chr3_1:60805722-60805741 None:intergenic 30.0%
GATAAAATACGTACCATCAA+CGG + chr3_1:60805762-60805781 None:intergenic 30.0%
AGGTAAAACAGTATGATTAC+AGG + chr3_1:60805849-60805868 None:intergenic 30.0%
TACTTCAAATACTACTTGCT+AGG - chr3_1:60806063-60806082 Msa0366240:intron 30.0%
GGTTAAAAGATATGGTAGAT+TGG - chr3_1:60806101-60806120 Msa0366240:intron 30.0%
TGGTAGTATGAACAAATTAC+GGG - chr3_1:60806121-60806140 Msa0366240:intron 30.0%
ATACTCACTAGAAAGGAAAA+AGG + chr3_1:60806189-60806208 None:intergenic 30.0%
TCTAGTGAGTATAATTTCAC+TGG - chr3_1:60806197-60806216 Msa0366240:intron 30.0%
TGATGTACAGACAAAACTAA+AGG + chr3_1:60806234-60806253 None:intergenic 30.0%
!! AACACTAAGGTTTTATGGTT+TGG + chr3_1:60806359-60806378 None:intergenic 30.0%
AAACCATAAAACCTTAGTGT+TGG - chr3_1:60806358-60806377 Msa0366240:intron 30.0%
AACCATAAAACCTTAGTGTT+GGG - chr3_1:60806359-60806378 Msa0366240:intron 30.0%
ACAAATCATATTCGTTTCAC+TGG + chr3_1:60806395-60806414 None:intergenic 30.0%
ATAAGTGCTTATACTGTAAG+TGG - chr3_1:60806673-60806692 Msa0366240:intron 30.0%
ATTAAGCTGTTTATCCAAAC+AGG - chr3_1:60806699-60806718 Msa0366240:intron 30.0%
AAAAGGATCAATTCACCTAT+GGG - chr3_1:60806794-60806813 Msa0366240:intron 30.0%
!!! CTATTTTTTGTTTCACACGT+TGG - chr3_1:60806854-60806873 Msa0366240:intron 30.0%
GCGCATGATAGAAATAAAAA+GGG - chr3_1:60807211-60807230 Msa0366240:intron 30.0%
ATGATAGAAATAAAAAGGGC+AGG - chr3_1:60807215-60807234 Msa0366240:intron 30.0%
GGAATATTATCTAATGGCAT+AGG + chr3_1:60807257-60807276 None:intergenic 30.0%
GAGAAGGGAATATTATCTAA+TGG + chr3_1:60807263-60807282 None:intergenic 30.0%
!!! ACTGTTGTGATTTTTTGTTC+TGG - chr3_1:60807389-60807408 Msa0366240:intron 30.0%
!!! GCTGGTATAGTTTTAATTCT+TGG - chr3_1:60807509-60807528 Msa0366240:intron 30.0%
GACAATAAACTTCTTCAACT+TGG - chr3_1:60807817-60807836 Msa0366240:CDS 30.0%
TGATACAATGCATACTTACA+AGG + chr3_1:60807922-60807941 None:intergenic 30.0%
GCATTGTATCAAATTCTCAA+TGG - chr3_1:60807931-60807950 Msa0366240:intron 30.0%
CCAAAAGATATTGAATTCTC+AGG + chr3_1:60808033-60808052 None:intergenic 30.0%
! CCTGAGAATTCAATATCTTT+TGG - chr3_1:60808030-60808049 Msa0366240:CDS 30.0%
! GACGTTTTTACATGTAAAAC+TGG + chr3_1:60808069-60808088 None:intergenic 30.0%
ATCTAATTGTCTACATGAAG+AGG - chr3_1:60808130-60808149 Msa0366240:intron 30.0%
GTATGGATCGATTAACATAA+AGG + chr3_1:60808235-60808254 None:intergenic 30.0%
!! ATATATTGTTTTGTTGTCGG+GGG - chr3_1:60808301-60808320 Msa0366240:intron 30.0%
TATCATGTGTCTCTTCTATA+TGG - chr3_1:60808376-60808395 Msa0366240:intron 30.0%
! TTATGCACAGTTTTCGATAT+CGG - chr3_1:60808442-60808461 Msa0366240:CDS 30.0%
AATGAATATAAAACCGGACT+TGG + chr3_1:60808530-60808549 None:intergenic 30.0%
!! ATTATAACACAAGTGCTGAT+TGG - chr3_1:60808624-60808643 Msa0366240:intron 30.0%
ACTCCTTTACCTAAAATTAG+TGG + chr3_1:60808666-60808685 None:intergenic 30.0%
! TATGGAACTGATTGACTTAA+TGG - chr3_1:60808759-60808778 Msa0366240:intron 30.0%
! AACTGATTGACTTAATGGAA+AGG - chr3_1:60808764-60808783 Msa0366240:intron 30.0%
!!! GTTTTTAAAACATAGGTTGC+AGG + chr3_1:60808815-60808834 None:intergenic 30.0%
AAAAACTATATCGAACTGGA+CGG + chr3_1:60808977-60808996 None:intergenic 30.0%
AAAAGAATCAATCTTACCAG+AGG + chr3_1:60809305-60809324 None:intergenic 30.0%
!! TCTGGTAAGATTGATTCTTT+TGG - chr3_1:60809304-60809323 Msa0366240:intron 30.0%
! TAGCTCGATTTGTCAAATAA+AGG - chr3_1:60809481-60809500 Msa0366240:intron 30.0%
! TTTTCATGCTCATTGAAACA+TGG - chr3_1:60809540-60809559 Msa0366240:intron 30.0%
GAGCAAATACTATACTTAGT+AGG - chr3_1:60809665-60809684 Msa0366240:intron 30.0%
CACAGAAAATAAAACTGCTA+AGG + chr3_1:60809707-60809726 None:intergenic 30.0%
CACTTATCATATAAGTGCTT+AGG - chr3_1:60809828-60809847 Msa0366240:intron 30.0%
! TTAACTAAGGATTTGGTTGA+AGG + chr3_1:60810078-60810097 None:intergenic 30.0%
TAAACGGTTAACTAAGGATT+TGG + chr3_1:60810085-60810104 None:intergenic 30.0%
ATACCTTGGCTTAGATTAAA+CGG + chr3_1:60810101-60810120 None:intergenic 30.0%
GAAATGTTTAAGCTAGGTAA+TGG - chr3_1:60810167-60810186 Msa0366240:CDS 30.0%
ATCTTGTTAATGTATGGTAG+TGG - chr3_1:60810469-60810488 Msa0366240:CDS 30.0%
GATATTGAACTACTCTCAAA+AGG + chr3_1:60810530-60810549 None:intergenic 30.0%
AGTATCAATAGCAGCAAAAT+TGG + chr3_1:60810646-60810665 None:intergenic 30.0%
AAAGTCAAATTCTTGACAAG+AGG + chr3_1:60811065-60811084 None:intergenic 30.0%
! TCTTGTCAAGAATTTGACTT+TGG - chr3_1:60811064-60811083 Msa0366240:CDS 30.0%
! TGTCTACTGAGGATGTTTTA+AGG - chr3_1:60804616-60804635 Msa0366240:three_prime_UTR 35.0%
GTAACAGATGAATGGTTTAG+AGG - chr3_1:60804699-60804718 Msa0366240:three_prime_UTR 35.0%
AGAGGAAATGAAGAAAAGAG+TGG - chr3_1:60804717-60804736 Msa0366240:three_prime_UTR 35.0%
AGAAGAAAGTTTCATGAGAG+AGG - chr3_1:60804747-60804766 Msa0366240:three_prime_UTR 35.0%
AGAGGTGAAAATGATGATAG+AGG - chr3_1:60804765-60804784 Msa0366240:three_prime_UTR 35.0%
AGAAATGAAGAGTTTAGAGG+AGG - chr3_1:60804813-60804832 Msa0366240:three_prime_UTR 35.0%
AGAGGAGGTGAAAAAAAGAA+TGG - chr3_1:60804828-60804847 Msa0366240:three_prime_UTR 35.0%
AGAGAGGTGATAGAGAAAAT+GGG - chr3_1:60804874-60804893 Msa0366240:three_prime_UTR 35.0%
ATAAGGGGAAGATGAAGAAA+AGG - chr3_1:60804898-60804917 Msa0366240:three_prime_UTR 35.0%
TAAGGGGAAGATGAAGAAAA+GGG - chr3_1:60804899-60804918 Msa0366240:three_prime_UTR 35.0%
!! GTGAGAAGTTTTATGAGAGA+GGG - chr3_1:60804961-60804980 Msa0366240:three_prime_UTR 35.0%
! ACGAGGATACAGTTTTTGAT+AGG - chr3_1:60805018-60805037 Msa0366240:three_prime_UTR 35.0%
! CGAGGATACAGTTTTTGATA+GGG - chr3_1:60805019-60805038 Msa0366240:three_prime_UTR 35.0%
! TGATAGGGAAAATGGGTTTA+AGG - chr3_1:60805034-60805053 Msa0366240:intron 35.0%
! GATAGGGAAAATGGGTTTAA+GGG - chr3_1:60805035-60805054 Msa0366240:intron 35.0%
! ATAGGGAAAATGGGTTTAAG+GGG - chr3_1:60805036-60805055 Msa0366240:intron 35.0%
! GAACTTTAGAGGAATGGAAT+CGG - chr3_1:60805076-60805095 Msa0366240:intron 35.0%
! AACTTTAGAGGAATGGAATC+GGG - chr3_1:60805077-60805096 Msa0366240:intron 35.0%
!! GGTGAGAAGTTTTATGAGAA+AGG - chr3_1:60805113-60805132 Msa0366240:intron 35.0%
AAGGAAAGGTGAAAACTTCT+AGG - chr3_1:60805132-60805151 Msa0366240:intron 35.0%
AGGAAAGGTGAAAACTTCTA+GGG - chr3_1:60805133-60805152 Msa0366240:intron 35.0%
!! GAATCGTTTTAACAAGGATG+TGG - chr3_1:60805181-60805200 Msa0366240:intron 35.0%
! ACAAGGATGTGGTTTTTGAT+AGG - chr3_1:60805192-60805211 Msa0366240:intron 35.0%
! CAAGGATGTGGTTTTTGATA+GGG - chr3_1:60805193-60805212 Msa0366240:intron 35.0%
! GTGGTTTTTGATAGGGAAAA+TGG - chr3_1:60805200-60805219 Msa0366240:intron 35.0%
TGATAGGGAAAATGGGTATA+AGG - chr3_1:60805208-60805227 Msa0366240:intron 35.0%
GATAGGGAAAATGGGTATAA+GGG - chr3_1:60805209-60805228 Msa0366240:intron 35.0%
ATAGGGAAAATGGGTATAAG+GGG - chr3_1:60805210-60805229 Msa0366240:intron 35.0%
! GAACTTTAAAGGAATGGAGT+CGG - chr3_1:60805250-60805269 Msa0366240:intron 35.0%
! AACTTTAAAGGAATGGAGTC+GGG - chr3_1:60805251-60805270 Msa0366240:intron 35.0%
! GCCCCTTTAAGAAAAAGAAA+AGG - chr3_1:60805681-60805700 Msa0366240:intron 35.0%
AGAAAAAGAAAAGGGTGATG+AGG - chr3_1:60805690-60805709 Msa0366240:intron 35.0%
GAATTGACAAACAGCATCAA+AGG + chr3_1:60805802-60805821 None:intergenic 35.0%
! ACATTTTCCAGTTTCAAAGG+TGG + chr3_1:60805824-60805843 None:intergenic 35.0%
! GACACATTTTCCAGTTTCAA+AGG + chr3_1:60805827-60805846 None:intergenic 35.0%
!! CAGCTCTAAAATTTAGCTCA+AGG + chr3_1:60805968-60805987 None:intergenic 35.0%
TTAGAGCTGTACTGAGATAA+TGG - chr3_1:60805979-60805998 Msa0366240:intron 35.0%
TGCTAGGCACAATTTATGAA+TGG - chr3_1:60806079-60806098 Msa0366240:intron 35.0%
GCTAGGCACAATTTATGAAT+GGG - chr3_1:60806080-60806099 Msa0366240:intron 35.0%
TAGTATGAACAAATTACGGG+TGG - chr3_1:60806124-60806143 Msa0366240:intron 35.0%
AAGGAAAAAGGTGGAGTAAA+GGG + chr3_1:60806177-60806196 None:intergenic 35.0%
AAAGGAAAAAGGTGGAGTAA+AGG + chr3_1:60806178-60806197 None:intergenic 35.0%
GACAAAACTAAAGGCTAAAC+TGG + chr3_1:60806225-60806244 None:intergenic 35.0%
! ATCCCAACACTAAGGTTTTA+TGG + chr3_1:60806364-60806383 None:intergenic 35.0%
!!! GTTTTGAAGTTTGAGACCAA+GGG - chr3_1:60806423-60806442 Msa0366240:CDS 35.0%
! GACCAAGGGTATATTTGAAT+TGG - chr3_1:60806437-60806456 Msa0366240:intron 35.0%
AGCCAATTCAAATATACCCT+TGG + chr3_1:60806442-60806461 None:intergenic 35.0%
AAACTGTCATGTAGATCGTA+TGG + chr3_1:60806564-60806583 None:intergenic 35.0%
TTTAACATTTGGGTCCTGTT+TGG + chr3_1:60806716-60806735 None:intergenic 35.0%
GAAAAGGATCAATTCACCTA+TGG - chr3_1:60806793-60806812 Msa0366240:intron 35.0%
TTAACAGAACGACAATCATC+AGG + chr3_1:60806829-60806848 None:intergenic 35.0%
AGAAGTGAAGGAGAAGAAAA+AGG - chr3_1:60806984-60807003 Msa0366240:intron 35.0%
!! CCACAAAGGTAAGTATTGAA+GGG + chr3_1:60807068-60807087 None:intergenic 35.0%
!! TCCACAAAGGTAAGTATTGA+AGG + chr3_1:60807069-60807088 None:intergenic 35.0%
GGCGCATGATAGAAATAAAA+AGG - chr3_1:60807210-60807229 Msa0366240:intron 35.0%
TTCTTCTATGTTCTCTCTGT+CGG + chr3_1:60807294-60807313 None:intergenic 35.0%
! ACAGGTTTTCAGAAACAGAT+TGG - chr3_1:60807421-60807440 Msa0366240:intron 35.0%
CTAACAGGAAAGTCAAATGT+TGG - chr3_1:60807620-60807639 Msa0366240:intron 35.0%
CTCTTCTTAATGCACTTACT+AGG - chr3_1:60807651-60807670 Msa0366240:intron 35.0%
TTAATGCACTTACTAGGCAA+TGG - chr3_1:60807657-60807676 Msa0366240:intron 35.0%
TAATGCACTTACTAGGCAAT+GGG - chr3_1:60807658-60807677 Msa0366240:intron 35.0%
GCAGATAATTCACGATATGA+TGG + chr3_1:60807796-60807815 None:intergenic 35.0%
!! TTAGTTGATTTGCCAGGATA+TGG - chr3_1:60807854-60807873 Msa0366240:CDS 35.0%
ATCAAATTCTCAATGGTCAC+TGG - chr3_1:60807938-60807957 Msa0366240:intron 35.0%
! GTCTGTTTGTTAACATGTCA+AGG - chr3_1:60807981-60808000 Msa0366240:intron 35.0%
TACATGAAGAGGTGATTTAG+CGG - chr3_1:60808141-60808160 Msa0366240:intron 35.0%
AATCGATCCATACAATGATC+AGG - chr3_1:60808242-60808261 Msa0366240:CDS 35.0%
CTTATCTCCTGATCATTGTA+TGG + chr3_1:60808252-60808271 None:intergenic 35.0%
CATACAATGATCAGGAGATA+AGG - chr3_1:60808250-60808269 Msa0366240:CDS 35.0%
AATGATCAGGAGATAAGGTT+TGG - chr3_1:60808255-60808274 Msa0366240:CDS 35.0%
GCCATTAATATGAGAACTGA+CGG - chr3_1:60808464-60808483 Msa0366240:CDS 35.0%
ACCGTCAGTTCTCATATTAA+TGG + chr3_1:60808468-60808487 None:intergenic 35.0%
TATAAAACCGGACTTGGATT+CGG + chr3_1:60808524-60808543 None:intergenic 35.0%
! TCGGGAAAACCACTAATTTT+AGG - chr3_1:60808654-60808673 Msa0366240:CDS 35.0%
! TAAAGGAGTATGTAGCAACA+CGG - chr3_1:60808677-60808696 Msa0366240:CDS 35.0%
TCAATCAGTTCCATATCTCT+TGG + chr3_1:60808754-60808773 None:intergenic 35.0%
ATGGAAAGGTAAACCATACA+AGG - chr3_1:60808778-60808797 Msa0366240:intron 35.0%
TGGAAAGGTAAACCATACAA+GGG - chr3_1:60808779-60808798 Msa0366240:intron 35.0%
GTAAACCATACAAGGGAAAT+TGG - chr3_1:60808786-60808805 Msa0366240:intron 35.0%
CTGCATTTAACCGTATGAAT+CGG - chr3_1:60808879-60808898 Msa0366240:intron 35.0%
TGCATTTAACCGTATGAATC+GGG - chr3_1:60808880-60808899 Msa0366240:intron 35.0%
! CTATGGTTCAGTTCTTTTAG+CGG + chr3_1:60808923-60808942 None:intergenic 35.0%
CTGTCTTGGTTAATACTATC+TGG + chr3_1:60809114-60809133 None:intergenic 35.0%
!! GGGAAAAAAAAGGTACTGAT+AGG + chr3_1:60809197-60809216 None:intergenic 35.0%
! GGTTGAATTACAGACTTGTT+CGG + chr3_1:60809284-60809303 None:intergenic 35.0%
! GTCTTTTTGGACATTACTGT+TGG - chr3_1:60809360-60809379 Msa0366240:intron 35.0%
! AACCGAAGTACCAAATAAAG+AGG - chr3_1:60809603-60809622 Msa0366240:intron 35.0%
! GTCCTCTTTATTTGGTACTT+CGG + chr3_1:60809608-60809627 None:intergenic 35.0%
AAACAATTGTGAGGCTGTTT+GGG + chr3_1:60810001-60810020 None:intergenic 35.0%
AAAACAATTGTGAGGCTGTT+TGG + chr3_1:60810002-60810021 None:intergenic 35.0%
! AAGGATTTGGTTGAAGGTAT+TGG + chr3_1:60810072-60810091 None:intergenic 35.0%
TAACCGTTTAATCTAAGCCA+AGG - chr3_1:60810095-60810114 Msa0366240:CDS 35.0%
TTGTCAGAGCTTATAACACA+AGG - chr3_1:60810144-60810163 Msa0366240:CDS 35.0%
TGTCAGAGCTTATAACACAA+GGG - chr3_1:60810145-60810164 Msa0366240:CDS 35.0%
ACAAGGGAAATGTTTAAGCT+AGG - chr3_1:60810161-60810180 Msa0366240:CDS 35.0%
TGGATAGAGTTGAGAAAAAC+GGG + chr3_1:60810319-60810338 None:intergenic 35.0%
GTGGATAGAGTTGAGAAAAA+CGG + chr3_1:60810320-60810339 None:intergenic 35.0%
GGTGTACAGTAAACAAAATG+AGG + chr3_1:60810430-60810449 None:intergenic 35.0%
TCTACATCAGCAAAAACACA+TGG + chr3_1:60810676-60810695 None:intergenic 35.0%
AACATGTCATTATTCCTACG+TGG + chr3_1:60810718-60810737 None:intergenic 35.0%
CCAAGGGAACAAAAAAATGT+TGG + chr3_1:60810836-60810855 None:intergenic 35.0%
!!! CCAACATTTTTTTGTTCCCT+TGG - chr3_1:60810833-60810852 Msa0366240:CDS 35.0%
CTACCATTCTATTTGACCAA+GGG + chr3_1:60810852-60810871 None:intergenic 35.0%
TAAGCATGTAGAAAAGGAGT+GGG + chr3_1:60810886-60810905 None:intergenic 35.0%
ATGCAGTAAGCATGTAGAAA+AGG + chr3_1:60810892-60810911 None:intergenic 35.0%
TTTCTACATGCTTACTGCAT+TGG - chr3_1:60810892-60810911 Msa0366240:CDS 35.0%
ATTGAACCATTGGAATTGGT+TGG + chr3_1:60810934-60810953 None:intergenic 35.0%
AAGCATGAACATCATTACAG+TGG - chr3_1:60810992-60811011 Msa0366240:CDS 35.0%
! GAATTTGACTTTGGACTGAA+TGG - chr3_1:60811073-60811092 Msa0366240:CDS 35.0%
TTGGACTGAATGGTATACAT+AGG - chr3_1:60811083-60811102 Msa0366240:CDS 35.0%
GAGAGAGGTGATAGAGAAAA+TGG - chr3_1:60804873-60804892 Msa0366240:three_prime_UTR 40.0%
! ATGAAGAAAAGGGTGGACTT+TGG - chr3_1:60804909-60804928 Msa0366240:three_prime_UTR 40.0%
!! GGTGAGAAGTTTTATGAGAG+AGG - chr3_1:60804960-60804979 Msa0366240:three_prime_UTR 40.0%
!! GAAGTTTTATGAGAGAGGGA+AGG - chr3_1:60804965-60804984 Msa0366240:three_prime_UTR 40.0%
AGAAGTAGAAAGGATGAGAG+TGG - chr3_1:60804990-60805009 Msa0366240:three_prime_UTR 40.0%
AAGAAAAGGGCGAACTTTAG+AGG - chr3_1:60805065-60805084 Msa0366240:intron 40.0%
TGGTGAGAAGTTTCATGAGA+GGG - chr3_1:60805286-60805305 Msa0366240:intron 40.0%
!! ATTCTTTTGGGAGGAAGAAG+AGG - chr3_1:60805327-60805346 Msa0366240:intron 40.0%
!! TTCTTTTGGGAGGAAGAAGA+GGG - chr3_1:60805328-60805347 Msa0366240:intron 40.0%
! GAAGAGGGTATATGCTAATG+AGG - chr3_1:60805343-60805362 Msa0366240:intron 40.0%
AGGGTATATGCTAATGAGGA+AGG - chr3_1:60805347-60805366 Msa0366240:intron 40.0%
ATATGCTAATGAGGAAGGAG+TGG - chr3_1:60805352-60805371 Msa0366240:intron 40.0%
CCAGATTGTACGTTCATCAT+CGG + chr3_1:60805480-60805499 None:intergenic 40.0%
CGATGATGAACGTACAATCT+GGG - chr3_1:60805478-60805497 Msa0366240:intron 40.0%
! GAACGTACAATCTGGGATTT+CGG - chr3_1:60805485-60805504 Msa0366240:intron 40.0%
GGATTTCGGTAAATTGAAGC+AGG - chr3_1:60805499-60805518 Msa0366240:intron 40.0%
TGACATGAAAAAACCAGGGT+TGG - chr3_1:60805631-60805650 Msa0366240:intron 40.0%
!! GTCAATTCCACCTTTGAAAC+TGG - chr3_1:60805814-60805833 Msa0366240:intron 40.0%
CTCACTAGAAAGGAAAAAGG+TGG + chr3_1:60806186-60806205 None:intergenic 40.0%
! AAACCTTAGTGTTGGGATTG+TGG - chr3_1:60806366-60806385 Msa0366240:intron 40.0%
!!! GGTTTTGAAGTTTGAGACCA+AGG - chr3_1:60806422-60806441 Msa0366240:CDS 40.0%
! TTCAGGAAGTACAGAAGTGA+AGG - chr3_1:60806972-60806991 Msa0366240:intron 40.0%
!! AAGGTAAGTATTGAAGGGCT+AGG + chr3_1:60807063-60807082 None:intergenic 40.0%
CCCTTCAATACTTACCTTTG+TGG - chr3_1:60807065-60807084 Msa0366240:intron 40.0%
!! CTGTCGGAACTTTTAGAGAA+GGG + chr3_1:60807278-60807297 None:intergenic 40.0%
!! TCTGTCGGAACTTTTAGAGA+AGG + chr3_1:60807279-60807298 None:intergenic 40.0%
! TTGTTCTGGTAATCTGAGAC+AGG - chr3_1:60807403-60807422 Msa0366240:intron 40.0%
ATTTCCACCTCCTAATCTTC+CGG - chr3_1:60807475-60807494 Msa0366240:CDS 40.0%
AATGCAATCTCCGGAAGATT+AGG + chr3_1:60807488-60807507 None:intergenic 40.0%
ATACCAGCAAATGCAATCTC+CGG + chr3_1:60807497-60807516 None:intergenic 40.0%
TTGTAGTTGCTTAGCGAAAC+AGG - chr3_1:60807561-60807580 Msa0366240:intron 40.0%
!!! GTTTTTTGCTGATTGTGTCC+TGG - chr3_1:60807597-60807616 Msa0366240:intron 40.0%
! ATTTGACTTTCCTGTTAGCC+AGG + chr3_1:60807618-60807637 None:intergenic 40.0%
AATGCACTTACTAGGCAATG+GGG - chr3_1:60807659-60807678 Msa0366240:intron 40.0%
GAACCTAGAATACCTGTGTA+TGG + chr3_1:60807712-60807731 None:intergenic 40.0%
!! CTTAGCTTAGTTGATTTGCC+AGG - chr3_1:60807848-60807867 Msa0366240:CDS 40.0%
AAGACGAAGTGAAAGAAGCT+TGG - chr3_1:60807891-60807910 Msa0366240:intron 40.0%
AGACGAAGTGAAAGAAGCTT+GGG - chr3_1:60807892-60807911 Msa0366240:intron 40.0%
TTGTTTACTGCAGCAGATTC+TGG + chr3_1:60808413-60808432 None:intergenic 40.0%
!! AGTGCTGATTGGTTGTGTTT+CGG - chr3_1:60808635-60808654 Msa0366240:CDS 40.0%
! AAAGGAGTATGTAGCAACAC+GGG - chr3_1:60808678-60808697 Msa0366240:CDS 40.0%
AACATAACCAGACATCGAAC+CGG - chr3_1:60808832-60808851 Msa0366240:intron 40.0%
GGTTAAATGCAGTTGAACCA+TGG + chr3_1:60808871-60808890 None:intergenic 40.0%
!! CAGTTTTGTCCCGATTCATA+CGG + chr3_1:60808892-60808911 None:intergenic 40.0%
CCATGAACTGACATTGTCTA+TGG + chr3_1:60808940-60808959 None:intergenic 40.0%
CCATAGACAATGTCAGTTCA+TGG - chr3_1:60808937-60808956 Msa0366240:intron 40.0%
! GATGTAATGTAACTTGCCGA+AGG + chr3_1:60809035-60809054 None:intergenic 40.0%
! TACCGTTTTCCCAATTGATG+TGG - chr3_1:60809135-60809154 Msa0366240:intron 40.0%
! ATTCACCTCTTCGATTTGCA+TGG + chr3_1:60809170-60809189 None:intergenic 40.0%
CAAGTCTGTAATTCAACCTC+TGG - chr3_1:60809286-60809305 Msa0366240:intron 40.0%
ATGATGCCTATTGCAGATGA+TGG - chr3_1:60809404-60809423 Msa0366240:intron 40.0%
! ATGATGGCTAGCTCAAAATC+TGG - chr3_1:60809420-60809439 Msa0366240:intron 40.0%
TTCGAGGTTAAGACCTTGTT+TGG - chr3_1:60809771-60809790 Msa0366240:intron 40.0%
!! GGTTGAAGGTATTGGCTTTA+GGG + chr3_1:60810064-60810083 None:intergenic 40.0%
!! TGGTTGAAGGTATTGGCTTT+AGG + chr3_1:60810065-60810084 None:intergenic 40.0%
TCTAAGCCAAGGTATAAGCT+TGG - chr3_1:60810106-60810125 Msa0366240:CDS 40.0%
TTGGAACCAAGCTTATACCT+TGG + chr3_1:60810115-60810134 None:intergenic 40.0%
GATAGAATGGAACGGAAAAG+CGG + chr3_1:60810269-60810288 None:intergenic 40.0%
GGTGCAATGATAGAATGGAA+CGG + chr3_1:60810277-60810296 None:intergenic 40.0%
GATAGAGTTGAGAAAAACGG+GGG + chr3_1:60810317-60810336 None:intergenic 40.0%
GGATAGAGTTGAGAAAAACG+GGG + chr3_1:60810318-60810337 None:intergenic 40.0%
TGCTGCTATTGATACTTTGC+AGG - chr3_1:60810650-60810669 Msa0366240:CDS 40.0%
!! AGAGACGTGCCACTTAAAAT+TGG + chr3_1:60810755-60810774 None:intergenic 40.0%
GTTCCCTTGGTCAAATAGAA+TGG - chr3_1:60810846-60810865 Msa0366240:CDS 40.0%
GCTACCATTCTATTTGACCA+AGG + chr3_1:60810853-60810872 None:intergenic 40.0%
GTAAGCATGTAGAAAAGGAG+TGG + chr3_1:60810887-60810906 None:intergenic 40.0%
!! ATCATTACAGTGGTGCTATC+TGG - chr3_1:60811002-60811021 Msa0366240:CDS 40.0%
! AAGAAAAGGGTGGACTTTGG+AGG - chr3_1:60804912-60804931 Msa0366240:three_prime_UTR 45.0%
AGGGAAGGTGAGAAGTAGAA+AGG - chr3_1:60804980-60804999 Msa0366240:three_prime_UTR 45.0%
!!! GGATGAGAGTGGTTTTAACG+AGG - chr3_1:60805001-60805020 Msa0366240:three_prime_UTR 45.0%
! AAGGGCGAACTTTAGAGGAA+TGG - chr3_1:60805070-60805089 Msa0366240:intron 45.0%
GAATGGAATCGGGTGAAGAA+AGG - chr3_1:60805087-60805106 Msa0366240:intron 45.0%
GTGGTGAGAAGTTTCATGAG+AGG - chr3_1:60805285-60805304 Msa0366240:intron 45.0%
GGTGAGAAGTTTCATGAGAG+GGG - chr3_1:60805287-60805306 Msa0366240:intron 45.0%
TGGAGGAAAGCGAGAAATCA+TGG - chr3_1:60805372-60805391 Msa0366240:intron 45.0%
GAAAGCGAGAAATCATGGAG+TGG - chr3_1:60805377-60805396 Msa0366240:intron 45.0%
CCGATGATGAACGTACAATC+TGG - chr3_1:60805477-60805496 Msa0366240:intron 45.0%
CATGAAAAAACCAGGGTTGG+AGG - chr3_1:60805634-60805653 Msa0366240:intron 45.0%
GATGATTCCATTGCCGTTGA+TGG - chr3_1:60805746-60805765 Msa0366240:intron 45.0%
ATACGTACCATCAACGGCAA+TGG + chr3_1:60805756-60805775 None:intergenic 45.0%
CAACCACAATCCCAACACTA+AGG + chr3_1:60806372-60806391 None:intergenic 45.0%
GAAGGAGAAGAAAAAGGACG+CGG - chr3_1:60806990-60807009 Msa0366240:intron 45.0%
AGGCTGTATTGCACGGAATT+GGG + chr3_1:60807043-60807062 None:intergenic 45.0%
TAGGCTGTATTGCACGGAAT+TGG + chr3_1:60807044-60807063 None:intergenic 45.0%
ATAATTCACAGCTGTTGGGC+AGG - chr3_1:60807186-60807205 Msa0366240:intron 45.0%
ATGCACTTACTAGGCAATGG+GGG - chr3_1:60807660-60807679 Msa0366240:intron 45.0%
TAGAATACCTGTGTATGGCC+AGG + chr3_1:60807707-60807726 None:intergenic 45.0%
TGGCCATACACAGGTATTCT+AGG - chr3_1:60807706-60807725 Msa0366240:intron 45.0%
GCATACGCAAATCCATATCC+TGG + chr3_1:60807869-60807888 None:intergenic 45.0%
TCAATGGTCACTGGTCACAT+TGG - chr3_1:60807947-60807966 Msa0366240:intron 45.0%
AAGAGGTGATTTAGCGGTTC+TGG - chr3_1:60808147-60808166 Msa0366240:intron 45.0%
GGTTGAGATCGAAAACAGTG+TGG - chr3_1:60808485-60808504 Msa0366240:CDS 45.0%
!! GGATTGGAATTTGAGTTGCC+CGG - chr3_1:60808586-60808605 Msa0366240:intron 45.0%
!! GTGCTGATTGGTTGTGTTTC+GGG - chr3_1:60808636-60808655 Msa0366240:CDS 45.0%
GGGCATGAAACCAAGAGATA+TGG - chr3_1:60808741-60808760 Msa0366240:intron 45.0%
ATCGAACTGGACGGTTCAAT+TGG + chr3_1:60808968-60808987 None:intergenic 45.0%
TGGGAAAACGGTATCTGTCT+TGG + chr3_1:60809128-60809147 None:intergenic 45.0%
CGCCACATCAATTGGGAAAA+CGG + chr3_1:60809140-60809159 None:intergenic 45.0%
! GCTCAATCGCAGAGTCTTTT+TGG - chr3_1:60809347-60809366 Msa0366240:intron 45.0%
AGCTAGCCATCATCTGCAAT+AGG + chr3_1:60809413-60809432 None:intergenic 45.0%
TTTGACAAATCGAGCTACGC+TGG + chr3_1:60809478-60809497 None:intergenic 45.0%
TTGGAGTAACGTTGTCTTCG+AGG - chr3_1:60809755-60809774 Msa0366240:intron 45.0%
TAGCTATCCTGCAGAGTTCA+TGG - chr3_1:60809922-60809941 Msa0366240:intron 45.0%
CTTATGTCCATGAACTCTGC+AGG + chr3_1:60809932-60809951 None:intergenic 45.0%
!! TATTGGCTTTAGGGACCGTA+TGG + chr3_1:60810055-60810074 None:intergenic 45.0%
GCTCTGACAAAAGTCATGCT+TGG + chr3_1:60810134-60810153 None:intergenic 45.0%
GGAGTGGTGCAATGATAGAA+TGG + chr3_1:60810282-60810301 None:intergenic 45.0%
AAACGGGGGAGAAACAATGA+GGG + chr3_1:60810303-60810322 None:intergenic 45.0%
AAAACGGGGGAGAAACAATG+AGG + chr3_1:60810304-60810323 None:intergenic 45.0%
TCTCAACTCTATCCACACCT+CGG - chr3_1:60810324-60810343 Msa0366240:CDS 45.0%
AAACAGCTGAAGAAGGGAGA+TGG + chr3_1:60810356-60810375 None:intergenic 45.0%
AGGGTGAAACAGCTGAAGAA+GGG + chr3_1:60810362-60810381 None:intergenic 45.0%
! ACTCTAGGAGATTGACCTCA+GGG + chr3_1:60810381-60810400 None:intergenic 45.0%
TATTCCTACGTGGTGTCTTC+AGG + chr3_1:60810708-60810727 None:intergenic 45.0%
AACCATTGGAATTGGTTGGC+CGG + chr3_1:60810930-60810949 None:intergenic 45.0%
TTCATGGGATGTGGGTTTGT+AGG - chr3_1:60810967-60810986 Msa0366240:CDS 45.0%
!!! AATTTATTATTATATTTTCA+TGG - chr3_1:60810951-60810970 Msa0366240:CDS 5.0%
!!! ATTTATTATTATATTTTCAT+GGG - chr3_1:60810952-60810971 Msa0366240:CDS 5.0%
GGGGAAGATGAAGAAAAGGG+TGG - chr3_1:60804902-60804921 Msa0366240:three_prime_UTR 50.0%
! GGACTTTGGAGGAACCGAAT+CGG - chr3_1:60804923-60804942 Msa0366240:three_prime_UTR 50.0%
! GACTTTGGAGGAACCGAATC+GGG - chr3_1:60804924-60804943 Msa0366240:three_prime_UTR 50.0%
GAATCGGGTGAAGAAAGGAG+TGG - chr3_1:60805092-60805111 Msa0366240:intron 50.0%
GAATGGAGTCGGGTGAAGAA+AGG - chr3_1:60805261-60805280 Msa0366240:intron 50.0%
TGCTAATGAGGAAGGAGTGG+AGG - chr3_1:60805355-60805374 Msa0366240:intron 50.0%
GAAGGTGAGAGATGAGACTG+TGG - chr3_1:60805445-60805464 Msa0366240:intron 50.0%
TTAGCATCATCCTCCAACCC+TGG + chr3_1:60805647-60805666 None:intergenic 50.0%
ATCAGGTGTTTCGCTCCCAT+AGG + chr3_1:60806812-60806831 None:intergenic 50.0%
!! TGGGCGTTCTGAGACATTTC+AGG + chr3_1:60807024-60807043 None:intergenic 50.0%
AAGGGCTAGGCTGTATTGCA+CGG + chr3_1:60807050-60807069 None:intergenic 50.0%
! GGAATTTTTCGCTGCTGCGA+AGG - chr3_1:60807442-60807461 Msa0366240:intron 50.0%
ATCTCCGGAAGATTAGGAGG+TGG + chr3_1:60807482-60807501 None:intergenic 50.0%
GCAATCTCCGGAAGATTAGG+AGG + chr3_1:60807485-60807504 None:intergenic 50.0%
CTTCCGGAGATTGCATTTGC+TGG - chr3_1:60807491-60807510 Msa0366240:CDS 50.0%
CTGATTGTGTCCTGGCTAAC+AGG - chr3_1:60807605-60807624 Msa0366240:intron 50.0%
TGCACTTACTAGGCAATGGG+GGG - chr3_1:60807661-60807680 Msa0366240:intron 50.0%
CGAAGTGAAAGAAGCTTGGG+AGG - chr3_1:60807895-60807914 Msa0366240:intron 50.0%
TACTGCACCGAATCCAAGTC+CGG - chr3_1:60808514-60808533 Msa0366240:intron 50.0%
GAGTATGTAGCAACACGGGT+TGG - chr3_1:60808682-60808701 Msa0366240:CDS 50.0%
GGGCACCAATTTCCCTTGTA+TGG + chr3_1:60808794-60808813 None:intergenic 50.0%
CCATGGCTCAAAATTCTCGC+CGG + chr3_1:60808854-60808873 None:intergenic 50.0%
ACGTGCCATGCAAATCGAAG+AGG - chr3_1:60809162-60809181 Msa0366240:intron 50.0%
! GCTAGCTCAAAATCTGGAGC+AGG - chr3_1:60809426-60809445 Msa0366240:intron 50.0%
AGGCTGTTTGGGAGAGCTTA+CGG + chr3_1:60809990-60810009 None:intergenic 50.0%
GAACACACCAGCACGTAATG+TGG + chr3_1:60810211-60810230 None:intergenic 50.0%
TGTTCACCTAGTCTCCATGC+CGG - chr3_1:60810226-60810245 Msa0366240:CDS 50.0%
CGGAAAAGCGGTGTAAAGGT+GGG + chr3_1:60810257-60810276 None:intergenic 50.0%
ACGGAAAAGCGGTGTAAAGG+TGG + chr3_1:60810258-60810277 None:intergenic 50.0%
GGAACGGAAAAGCGGTGTAA+AGG + chr3_1:60810261-60810280 None:intergenic 50.0%
CTGAAGAAGGGAGATGGTGT+TGG + chr3_1:60810350-60810369 None:intergenic 50.0%
CAGGGTGAAACAGCTGAAGA+AGG + chr3_1:60810363-60810382 None:intergenic 50.0%
! TCTTCAGCTGTTTCACCCTG+AGG - chr3_1:60810363-60810382 Msa0366240:CDS 50.0%
! GACTCTAGGAGATTGACCTC+AGG + chr3_1:60810382-60810401 None:intergenic 50.0%
TACACCTGAAGACACCACGT+AGG - chr3_1:60810701-60810720 Msa0366240:CDS 50.0%
! GCATTGGTACCTAACCTCAC+CGG - chr3_1:60810908-60810927 Msa0366240:CDS 50.0%
GAACCGAATCGGGTGAAGAG+AGG - chr3_1:60804934-60804953 Msa0366240:three_prime_UTR 55.0%
GCTCCTCTCTTCACCCGATT+CGG + chr3_1:60804940-60804959 None:intergenic 55.0%
GAATCGGGTGAAGAGAGGAG+CGG - chr3_1:60804939-60804958 Msa0366240:three_prime_UTR 55.0%
GAGTCGGGTGAAGAAAGGAG+TGG - chr3_1:60805266-60805285 Msa0366240:intron 55.0%
ATTCACAGCTGTTGGGCAGG+AGG - chr3_1:60807189-60807208 Msa0366240:intron 55.0%
CTAGGCAATGGGGGGTTGTA+CGG - chr3_1:60807669-60807688 Msa0366240:intron 55.0%
ATGGGGGGTTGTACGGACAT+CGG - chr3_1:60807676-60807695 Msa0366240:intron 55.0%
!! ATTCTCGCCGGTTCGATGTC+TGG + chr3_1:60808842-60808861 None:intergenic 55.0%
! CCGGCGAGAATTTTGAGCCA+TGG - chr3_1:60808851-60808870 Msa0366240:intron 55.0%
CACGTCGCGCCACATCAATT+GGG + chr3_1:60809147-60809166 None:intergenic 55.0%
! AGCACGTAATGTGGCACTGG+CGG + chr3_1:60810202-60810221 None:intergenic 55.0%
ACCAGCACGTAATGTGGCAC+TGG + chr3_1:60810205-60810224 None:intergenic 55.0%
GGTGTAAAGGTGGGACAAGC+CGG + chr3_1:60810248-60810267 None:intergenic 55.0%
GGGGAGAAACAATGAGGGAG+TGG + chr3_1:60810298-60810317 None:intergenic 55.0%
TAGAGTCTGTTGCCGCCTAG+CGG - chr3_1:60810395-60810414 Msa0366240:CDS 55.0%
ATGAGGCTGTATGTCCCGCT+AGG + chr3_1:60810413-60810432 None:intergenic 55.0%
! ATTGGTTGGCCGGTGAGGTT+AGG + chr3_1:60810920-60810939 None:intergenic 55.0%
! TTGGAATTGGTTGGCCGGTG+AGG + chr3_1:60810925-60810944 None:intergenic 55.0%
CACCGGCCAACCAATTCCAA+TGG - chr3_1:60810925-60810944 Msa0366240:CDS 55.0%
GTACGGACATCGGACAAGCC+TGG - chr3_1:60807686-60807705 Msa0366240:intron 60.0%
GGACAAGCCTGGCCATACAC+AGG - chr3_1:60807697-60807716 Msa0366240:intron 60.0%
GCACGTCGCGCCACATCAAT+TGG + chr3_1:60809148-60809167 None:intergenic 60.0%
GCCAGTGCCACATTACGTGC+TGG - chr3_1:60810201-60810220 Msa0366240:CDS 60.0%
GACAAGCCGGCATGGAGACT+AGG + chr3_1:60810235-60810254 None:intergenic 60.0%
AAAGGTGGGACAAGCCGGCA+TGG + chr3_1:60810243-60810262 None:intergenic 60.0%
!! AGATGGTGTTGGCCGAGGTG+TGG + chr3_1:60810339-60810358 None:intergenic 60.0%
!! AAGGGAGATGGTGTTGGCCG+AGG + chr3_1:60810344-60810363 None:intergenic 60.0%
GCTAGGCGGCAACAGACTCT+AGG + chr3_1:60810396-60810415 None:intergenic 60.0%
AGAGTCTGTTGCCGCCTAGC+GGG - chr3_1:60810396-60810415 Msa0366240:CDS 60.0%
AGGCTGTATGTCCCGCTAGG+CGG + chr3_1:60810410-60810429 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 60804615 60811108 60804615 ID=Msa0366240;Name=Msa0366240
chr3_1 mRNA 60804615 60811108 60804615 ID=Msa0366240-mRNA-1;Parent=Msa0366240;Name=Msa0366240-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.8|0.72|0.90|0.9|0.90|11|450|648
chr3_1 exon 60804615 60805051 60804615 ID=Msa0366240-mRNA-1:exon:11757;Parent=Msa0366240-mRNA-1
chr3_1 exon 60806210 60806303 60806210 ID=Msa0366240-mRNA-1:exon:11756;Parent=Msa0366240-mRNA-1
chr3_1 exon 60806416 60806451 60806416 ID=Msa0366240-mRNA-1:exon:11755;Parent=Msa0366240-mRNA-1
chr3_1 exon 60806540 60806627 60806540 ID=Msa0366240-mRNA-1:exon:11754;Parent=Msa0366240-mRNA-1
chr3_1 exon 60807452 60807512 60807452 ID=Msa0366240-mRNA-1:exon:11753;Parent=Msa0366240-mRNA-1
chr3_1 exon 60807797 60807905 60807797 ID=Msa0366240-mRNA-1:exon:11752;Parent=Msa0366240-mRNA-1
chr3_1 exon 60808005 60808096 60808005 ID=Msa0366240-mRNA-1:exon:11751;Parent=Msa0366240-mRNA-1
chr3_1 exon 60808211 60808298 60808211 ID=Msa0366240-mRNA-1:exon:11750;Parent=Msa0366240-mRNA-1
chr3_1 exon 60808407 60808526 60808407 ID=Msa0366240-mRNA-1:exon:11749;Parent=Msa0366240-mRNA-1
chr3_1 exon 60808628 60808746 60808628 ID=Msa0366240-mRNA-1:exon:11748;Parent=Msa0366240-mRNA-1
chr3_1 exon 60809956 60811108 60809956 ID=Msa0366240-mRNA-1:exon:11747;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60809956 60811108 60809956 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60808628 60808746 60808628 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60808407 60808526 60808407 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60808211 60808298 60808211 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60808005 60808096 60808005 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60807797 60807905 60807797 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60807452 60807512 60807452 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60806540 60806627 60806540 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60806416 60806451 60806416 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 CDS 60806223 60806303 60806223 ID=Msa0366240-mRNA-1:cds;Parent=Msa0366240-mRNA-1
chr3_1 three_prime_UTR 60806210 60806222 60806210 ID=Msa0366240-mRNA-1:three_prime_utr;Parent=Msa0366240-mRNA-1
chr3_1 three_prime_UTR 60804615 60805051 60804615 ID=Msa0366240-mRNA-1:three_prime_utr;Parent=Msa0366240-mRNA-1
Gene Sequence

>Msa0366240

ATGTCTACTGAGGATGTTTTAAGGAATAAGATTAGAAAAAATCCTAAAGTTGGTGTAAGAATTTCTAGGAACTCGTCTAGAATTGTAACAGATGAATGGTTTAGAGGAAATGAAGAAAAGAGTGGTTATGAGAGAAGAAAGTTTCATGAGAGAGGTGAAAATGATGATAGAGGAAATAGGTATAAAGTGAAATTGAAGAGAAATGAAGAGTTTAGAGGAGGTGAAAAAAAGAATGGTTATGAGAGAAGAAAGTTTTATGAGAGAGGTGATAGAGAAAATGGGTATAAGGGGAAGATGAAGAAAAGGGTGGACTTTGGAGGAACCGAATCGGGTGAAGAGAGGAGCGGTGAGAAGTTTTATGAGAGAGGGAAGGTGAGAAGTAGAAAGGATGAGAGTGGTTTTAACGAGGATACAGTTTTTGATAGGGAAAATGGGTTTAAGGGGAAAATGAAGAAAAGGGCGAACTTTAGAGGAATGGAATCGGGTGAAGAAAGGAGTGGTGAGAAGTTTTATGAGAAAGGAAAGGTGAAAACTTCTAGGGACTCGTCGAGAACTAGAAATGATGAGAATCGTTTTAACAAGGATGTGGTTTTTGATAGGGAAAATGGGTATAAGGGGAAGTTGAAGAAAAATGTGAACTTTAAAGGAATGGAGTCGGGTGAAGAAAGGAGTGGTGAGAAGTTTCATGAGAGGGGAAAGTTAAAAAAATTGGATTCTTTTGGGAGGAAGAAGAGGGTATATGCTAATGAGGAAGGAGTGGAGGAAAGCGAGAAATCATGGAGTGGTGTGAAGATATCCAAGAAGAAACCTTTGTTTAAGAAAAAGGAGAAGAAGGTGAGAGATGAGACTGTGGAAGAGAAAACCGATGATGAACGTACAATCTGGGATTTCGGTAAATTGAAGCAGGCAAAATCCAAGAAGAAGCTTTCAAATCAAAGTTTGAAGGACAAGAAAGAAATTGATGAAAAAGATGATAGTGCTGAGAAAGTTAGAGAAGTTGTGTCTCCTTCAAAATCTGACATGAAAAAACCAGGGTTGGAGGATGATGCTAAGAGACTAGATGATCGCCCCTTTAAGAAAAAGAAAAGGGTGATGAGGATTGATCCATATGATATCTCAAACAAGAGACTAGATGATTCCATTGCCGTTGATGGAAGTACAGAAGTGAAGGAGAAGAAAAAGGACGCGGAGAAAGAGCCTGAAATGTCTCAGAACGCCCAATTCCGTGCAATACAGCCTAGCCCTTCAATACTTACCTTTGTGGAAAAAAATCTGTTGGGCAGGAGGCGCATGATAGAAATAAAAAGGGCAGGCTACAATATAGAACTTCCTATGCCATTAGATAATATTCCCTTCTCTAAAAGTTCCGACAGAGAGAACATAGAAGAAAATGTTTTCAGAAACAGATTGGAATTTTTCGCTGCTGCGAAGGTCTCATCGTCATTTCCACCTCCTAATCTTCCGGAGATTGCATTTGCTGGAAAGTCAAATGTTGGTAAATCATCTCTTCTTAATGCACTTACTAGGCAATGGGGGGTTGTACGGACATCGGACAAGCCTGGCCATACACAGACAATAAACTTCTTCAACTTGGGAACAAAGCTTAGCTTAGTTGATTTGCCAGGATATGGATTTGCGTATGCAAAAGACGAAGTGAAAGAAGCTTGGGAGGACCTTGTAATCTTAAAGCTTCATATTGTTCCCTTTATGTTAATCGATCCATACAATGATCAGGAGATAAGATCAAAAACTAAATACCAGATAGTATTAACCAAGACAGATACCGTTTTCCCAATTGATGTGGCGCGACGTGCCATGCAAATCGAAGAGAGTCTCTTGCCGAACAAGTCTGTAATTCAACCTCTGATGATGGCTAGCTCAAAATCTGGAGCAGGCATCAGAAGCTTGAGAACTGTTCTTGCCAGCGTAGCTCGATTTGTCAAATAA

Protein sequence

>Msa0366240

MSTEDVLRNKIRKNPKVGVRISRNSSRIVTDEWFRGNEEKSGYERRKFHERGENDDRGNRYKVKLKRNEEFRGGEKKNGYERRKFYERGDRENGYKGKMKKRVDFGGTESGEERSGEKFYERGKVRSRKDESGFNEDTVFDRENGFKGKMKKRANFRGMESGEERSGEKFYEKGKVKTSRDSSRTRNDENRFNKDVVFDRENGYKGKLKKNVNFKGMESGEERSGEKFHERGKLKKLDSFGRKKRVYANEEGVEESEKSWSGVKISKKKPLFKKKEKKVRDETVEEKTDDERTIWDFGKLKQAKSKKKLSNQSLKDKKEIDEKDDSAEKVREVVSPSKSDMKKPGLEDDAKRLDDRPFKKKKRVMRIDPYDISNKRLDDSIAVDGSTEVKEKKKDAEKEPEMSQNAQFRAIQPSPSILTFVEKNLLGRRRMIEIKRAGYNIELPMPLDNIPFSKSSDRENIEENVFRNRLEFFAAAKVSSSFPPPNLPEIAFAGKSNVGKSSLLNALTRQWGVVRTSDKPGHTQTINFFNLGTKLSLVDLPGYGFAYAKDEVKEAWEDLVILKLHIVPFMLIDPYNDQEIRSKTKYQIVLTKTDTVFPIDVARRAMQIEESLLPNKSVIQPLMMASSKSGAGIRSLRTVLASVARFVK*