AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0506880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506880 MtrunA17_Chr3g0110271 93.780 1045 20 2 1 1000 47 1091 0.0 1988
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506880 AT5G37630.1 54.981 1044 408 11 10 998 15 1051 0.0 1038

Find 217 sgRNAs with CRISPR-Local

Find 608 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCAAATTCATCAATTA+TGG 0.088827 3_4:-53704720 None:intergenic
TCTTGGTCTCTTTGGGCTTT+TGG 0.122377 3_4:+53701513 Msa0506880:CDS
AGAAGAAGTTAATCTCATTT+TGG 0.147092 3_4:+53704067 Msa0506880:CDS
GGAAGTTGAAGAGAGGAATT+AGG 0.153892 3_4:-53695269 None:intergenic
TCATCTTCATTGCTAGTTAA+AGG 0.161903 3_4:-53701820 None:intergenic
ATGGACTTTCTTTGCTAATT+TGG 0.185978 3_4:-53700639 None:intergenic
CAGAAGTGAGCAATGATTTA+TGG 0.207718 3_4:+53696278 Msa0506880:CDS
GCTAAGGACTTCATACATTA+AGG 0.212444 3_4:+53701567 Msa0506880:CDS
CTCCAATCTTTACTTCTTCC+TGG 0.219112 3_4:+53700845 Msa0506880:CDS
CGCATCTGAGACACCATAAA+AGG 0.234340 3_4:-53702325 None:intergenic
TCAGTCTCTTTAACGAATAA+TGG 0.234601 3_4:-53702397 None:intergenic
GTAAGATGTCTTGGTCTCTT+TGG 0.251500 3_4:+53701505 Msa0506880:CDS
AAGCAGAGGCTGCACTTTAT+TGG 0.256342 3_4:+53699327 Msa0506880:CDS
ATACACACCCTTTCTCTTAT+TGG 0.258540 3_4:+53700755 Msa0506880:CDS
TAAGATGTCTTGGTCTCTTT+GGG 0.269846 3_4:+53701506 Msa0506880:CDS
ATGAGAATGGGAAGTGGATT+TGG 0.280112 3_4:-53695223 None:intergenic
GAAGAGAGGAATTAGGGATT+TGG 0.290974 3_4:-53695262 None:intergenic
TATACGTACCAGCAACGATA+TGG 0.291514 3_4:-53700337 None:intergenic
ACTCGACTTCAACCTGGATT+TGG 0.293852 3_4:+53704484 Msa0506880:CDS
GAAGTTGAAGAGAGGAATTA+GGG 0.300322 3_4:-53695268 None:intergenic
ATCGGAGATGGCTTAAGTTT+TGG 0.305023 3_4:+53700587 Msa0506880:CDS
AGTGTCCATGCGCTTTCTTC+AGG 0.316701 3_4:+53700796 Msa0506880:CDS
TGATAGAATGTATGAAGGTT+AGG 0.323601 3_4:+53696308 Msa0506880:CDS
ATCAATTATGGGTGATCTAA+TGG 0.324078 3_4:-53704708 None:intergenic
TCCACCAAGCATTATATTGA+TGG 0.327640 3_4:+53699304 Msa0506880:CDS
CATTTGCTTGTGCAAGTCAT+AGG 0.329583 3_4:+53704922 Msa0506880:three_prime_UTR
TCTTCAAATTCATCAATTAT+GGG 0.332282 3_4:-53704719 None:intergenic
AGTAGAACATAATGCAGATT+AGG 0.332500 3_4:-53705065 None:intergenic
ACACCCGTTAATACGGTAAA+AGG 0.340525 3_4:+53704635 Msa0506880:CDS
GTAGATAATATTGCGGTTAC+CGG 0.340881 3_4:+53696249 Msa0506880:intron
AATTTCCTCTTCAAAGCTTA+AGG 0.342166 3_4:+53697782 Msa0506880:CDS
CTGTGACTCCGTTGGCCATT+TGG 0.349365 3_4:+53705010 Msa0506880:three_prime_UTR
GAATGCATTTATGCTGTTCT+TGG 0.350176 3_4:+53701841 Msa0506880:CDS
ATTTCTTGAGATGCTTCCTT+TGG 0.351899 3_4:+53696423 Msa0506880:CDS
GAGAGAGTTCTTTGAGTTTG+CGG 0.367473 3_4:-53695191 None:intergenic
TATTGTTTGATTTAGATTGC+AGG 0.372737 3_4:+53704866 Msa0506880:three_prime_UTR
AGACTCGCTTACTGATTCAT+AGG 0.373887 3_4:-53698469 None:intergenic
AAAGATTGGAGTAGTTCTTC+AGG 0.374042 3_4:-53700833 None:intergenic
TCCAATCTTTACTTCTTCCT+GGG 0.374588 3_4:+53700846 Msa0506880:CDS
AAGTCCTCTCCGAAGAATTA+TGG 0.385568 3_4:-53698331 None:intergenic
GTAGAACATAATGCAGATTA+GGG 0.387569 3_4:-53705064 None:intergenic
TTGTCACAGTTTACTTGGCT+TGG 0.387806 3_4:-53701688 None:intergenic
ATTTCTTGTCACAGTTTACT+TGG 0.401403 3_4:-53701693 None:intergenic
TGTTTCAAAAGTTCAGCATT+TGG 0.403143 3_4:-53701544 None:intergenic
TTTCTTTGCTAATTTGGCTA+TGG 0.403794 3_4:-53700633 None:intergenic
TCTAAATCTAACAGTCTTAT+CGG 0.404427 3_4:-53695430 None:intergenic
TTAAATTATTGAAAGATGAA+TGG 0.406890 3_4:+53698388 Msa0506880:CDS
AATGCATTTATGCTGTTCTT+GGG 0.415543 3_4:+53701842 Msa0506880:CDS
GCCACATTTAATTAGTATAG+AGG 0.422640 3_4:+53701591 Msa0506880:CDS
GTCAGAGCCCATATCGTTGC+TGG 0.422774 3_4:+53700329 Msa0506880:CDS
CTAAGGACTTCATACATTAA+GGG 0.428149 3_4:+53701568 Msa0506880:CDS
CGGCATGCAAAGCGATGGTT+TGG 0.432267 3_4:-53700431 None:intergenic
GATTCGAACTTCGTCGAAGA+TGG 0.439811 3_4:-53695151 None:intergenic
TTCTGCTTCGGTACCGGCTG+TGG 0.443284 3_4:-53700225 None:intergenic
AGAAGTGAGCAATGATTTAT+GGG 0.443474 3_4:+53696279 Msa0506880:CDS
TGCAAAGAAGCCGGTATGCT+TGG 0.444374 3_4:-53701904 None:intergenic
AGCTCAGGACCATAATTCTT+CGG 0.447432 3_4:+53698322 Msa0506880:CDS
CGTTTGATGTTATATGCTGC+TGG 0.452246 3_4:-53698548 None:intergenic
GGCAGACGACATCTTGTTCA+TGG 0.457240 3_4:-53704687 None:intergenic
GGCTGTACAGCTGGTGTTTG+TGG 0.458710 3_4:-53704524 None:intergenic
AGAATTGCTGTAAGATGTCT+TGG 0.461269 3_4:+53701496 Msa0506880:CDS
GTGTCCATGCGCTTTCTTCA+GGG 0.461370 3_4:+53700797 Msa0506880:CDS
CCCCAGGAAGAAGTAAAGAT+TGG 0.462423 3_4:-53700847 None:intergenic
GGCCACATTGAACGCATAGC+TGG 0.462649 3_4:-53702274 None:intergenic
CATATTAATTGTAGGGGAAG+GGG 0.463665 3_4:+53699274 Msa0506880:intron
AGCTACATATTTAACTAGAC+TGG 0.467357 3_4:-53704790 None:intergenic
TGCAGCATATACTTCTGCTT+CGG 0.467654 3_4:-53700237 None:intergenic
TCTGATGCTGCAGCCACAGC+CGG 0.467755 3_4:+53700212 Msa0506880:CDS
GCTCTCGTTGGCTGTACAGC+TGG 0.470915 3_4:-53704533 None:intergenic
ATTTATGCTGTTCTTGGGGA+AGG 0.473319 3_4:+53701847 Msa0506880:CDS
AGCGGAGAAGAAATGAGAAT+GGG 0.474944 3_4:-53695235 None:intergenic
CCCTCCTCACCACACTCAAA+TGG 0.476517 3_4:-53702481 None:intergenic
CCATTTGAGTGTGGTGAGGA+GGG 0.476983 3_4:+53702481 Msa0506880:CDS
TTGTGGATGGCTTACCTCTA+CGG 0.477336 3_4:-53702521 None:intergenic
GGTTCCTACACCCGTTAATA+CGG 0.481314 3_4:+53704628 Msa0506880:CDS
AAGCGGAGAAGAAATGAGAA+TGG 0.482104 3_4:-53695236 None:intergenic
GATAGAATGTATGAAGGTTA+GGG 0.482680 3_4:+53696309 Msa0506880:CDS
AAGAAAGTCCATGCGGCTCC+TGG 0.483659 3_4:+53700650 Msa0506880:CDS
AGATACTTCAAAAGTTCTAA+AGG 0.486715 3_4:-53698435 None:intergenic
GTAAAAGGCCAATAAGAGAA+AGG 0.487493 3_4:-53700763 None:intergenic
TCATTATCAACCTCGTGCTC+AGG 0.489397 3_4:-53700548 None:intergenic
ACGGTCCTCAAGAAGTTGAC+AGG 0.490407 3_4:+53701647 Msa0506880:CDS
CAACGAGAGCCACACGTTCA+AGG 0.492490 3_4:+53704546 Msa0506880:CDS
CACCAAGCAAAAGTAGTTGT+CGG 0.493243 3_4:-53700451 None:intergenic
GCATATTAATTGTAGGGGAA+GGG 0.493939 3_4:+53699273 Msa0506880:intron
CATTTGAGTGTGGTGAGGAG+GGG 0.497051 3_4:+53702482 Msa0506880:CDS
AATGTTGTTGTCATCGGAGA+TGG 0.499983 3_4:+53700575 Msa0506880:CDS
GCATCTGAGACACCATAAAA+GGG 0.500033 3_4:-53702324 None:intergenic
AGCTGCTAGTGTGTTTCTGC+AGG 0.500053 3_4:+53700508 Msa0506880:CDS
ATATACTTCTGCTTCGGTAC+CGG 0.502428 3_4:-53700231 None:intergenic
GTGGCTTTGAAAATGAAGAC+TGG 0.506420 3_4:+53701791 Msa0506880:CDS
GAGCCACACGTTCAAGGAGA+AGG 0.508606 3_4:+53704552 Msa0506880:CDS
ATACGTACCAGCAACGATAT+GGG 0.508817 3_4:-53700336 None:intergenic
ATGGAGGCACTTCTAAAAGC+TGG 0.508905 3_4:+53698495 Msa0506880:CDS
GTTCCGAGCAGCAGTAAAAG+AGG 0.509289 3_4:-53695334 None:intergenic
ATGTACTCATCAACTGAAGC+AGG 0.509705 3_4:-53700299 None:intergenic
CAACAGAAGCATCCAAATCC+AGG 0.510663 3_4:-53704496 None:intergenic
GGACTTGCTGACCGATCTGC+TGG 0.512669 3_4:+53698348 Msa0506880:CDS
TCCATTTGAGTGTGGTGAGG+AGG 0.514524 3_4:+53702480 Msa0506880:CDS
GCTTCCATCAATATAATGCT+TGG 0.516844 3_4:-53699308 None:intergenic
TTGCTCACTTCTGCATCATC+CGG 0.516946 3_4:-53696268 None:intergenic
AATACAGAGGTGTATATTGA+AGG 0.519741 3_4:+53702243 Msa0506880:intron
GGCTGCAGCATCAGAGCCTA+AGG 0.519780 3_4:-53700204 None:intergenic
AATTAGGGATTTGGAGAAAG+CGG 0.520104 3_4:-53695253 None:intergenic
GTCAATTGTCATTAGATGAT+CGG 0.521013 3_4:-53704018 None:intergenic
ATCATCTAATGACAATTGAC+AGG 0.521352 3_4:+53704021 Msa0506880:CDS
TACTGATAGATCATTGCTAC+AGG 0.522564 3_4:+53705084 Msa0506880:three_prime_UTR
GAAGAAGACAGCTGCTGAGA+AGG 0.523042 3_4:+53703845 Msa0506880:CDS
GTTTCTGCAGCATTAAGCTC+AGG 0.523467 3_4:+53698307 Msa0506880:intron
ACATATTTAACTAGACTGGT+TGG 0.524348 3_4:-53704786 None:intergenic
AACTTGCTCTCAATACCAAA+TGG 0.526173 3_4:-53705025 None:intergenic
TCGTTACCTCAGATACGATC+TGG 0.528653 3_4:-53695458 None:intergenic
TTCACGATTTATGTTGCAGA+TGG 0.529130 3_4:+53702366 Msa0506880:CDS
AGTTATCATTGACTGTACCT+TGG 0.533844 3_4:+53697711 Msa0506880:CDS
TCGGTGTCTTCCATTGTTAA+CGG 0.533846 3_4:-53695090 None:intergenic
AGCACAGGGTGCAAAGAAGC+CGG 0.535677 3_4:-53701913 None:intergenic
CAGCAGCATATAACATCAAA+CGG 0.535759 3_4:+53698549 Msa0506880:CDS
TAAAAGGCCAATAAGAGAAA+GGG 0.536708 3_4:-53700762 None:intergenic
CATTTAATTAGTATAGAGGC+TGG 0.537733 3_4:+53701595 Msa0506880:CDS
ACTTGAGAGGTTGCGCTGGA+AGG 0.539642 3_4:-53697691 None:intergenic
CTTGAACGTGTGGCTCTCGT+TGG 0.539958 3_4:-53704545 None:intergenic
CAAATGGCCAACGGAGTCAC+AGG 0.540398 3_4:-53705009 None:intergenic
CATAATTGATGAATTTGAAG+AGG 0.541764 3_4:+53704721 Msa0506880:CDS
CGAGGTGATAGAATGTATGA+AGG 0.542771 3_4:+53696303 Msa0506880:CDS
GAGCACGAGGTTGATAATGA+AGG 0.544391 3_4:+53700551 Msa0506880:CDS
AGCTAACGTGGTATATGTAA+TGG 0.545859 3_4:+53704809 Msa0506880:three_prime_UTR
GCAATACTGTCTATAACTTG+TGG 0.546134 3_4:-53702451 None:intergenic
ATTTACCTTAAGCTTTGAAG+AGG 0.546545 3_4:-53697787 None:intergenic
GTGAACTTCTCTGATTCTGA+AGG 0.548776 3_4:+53701727 Msa0506880:CDS
TCCATCAATATAATGCTTGG+TGG 0.549663 3_4:-53699305 None:intergenic
GAAGAAATGAGAATGGGAAG+TGG 0.550838 3_4:-53695229 None:intergenic
GCATCTCAAGAAATAAATCA+AGG 0.551506 3_4:-53696414 None:intergenic
CCAATCTTTACTTCTTCCTG+GGG 0.552987 3_4:+53700847 Msa0506880:CDS
CACCATAAAAGGGGAACCCC+CGG 0.553359 3_4:-53702314 None:intergenic
ACTGGAACTCGACTTCAACC+TGG 0.556588 3_4:+53704478 Msa0506880:CDS
TGGCTTATAAAGTGCTGTAA+TGG 0.558887 3_4:+53698408 Msa0506880:CDS
AGTTGATGAGTACATAGAGT+TGG 0.559832 3_4:+53700307 Msa0506880:CDS
AATGGGAAGTGGATTTGGAT+CGG 0.560751 3_4:-53695218 None:intergenic
AAAACCCTGTCAACTTCTTG+AGG 0.561433 3_4:-53701652 None:intergenic
TTCATCTTCGCCGTTAACAA+TGG 0.562001 3_4:+53695080 Msa0506880:exon
GAGGAAACTTCTATGTCGTA+TGG 0.562224 3_4:+53703944 Msa0506880:CDS
CCGATCTGCTGGTGTCTCGA+AGG 0.562367 3_4:+53698359 Msa0506880:CDS
TACCCTTCTCCTTGAACGTG+TGG 0.562582 3_4:-53704555 None:intergenic
AGAAGATTCTCAACCTTCTG+TGG 0.566694 3_4:+53704607 Msa0506880:CDS
ATCAGTAAGCGAGTCTGTCA+TGG 0.566786 3_4:+53698476 Msa0506880:CDS
GCTATGCGTTCAATGTGGCC+AGG 0.567131 3_4:+53702277 Msa0506880:CDS
TGTTAAAGAATTGAAACGCA+TGG 0.567785 3_4:+53703995 Msa0506880:CDS
CACGTTCAAGGAGAAGGGTA+AGG 0.568406 3_4:+53704558 Msa0506880:CDS
CTGCAAAAGTACGAACCACA+TGG 0.574238 3_4:-53696345 None:intergenic
GATAACTTGAGAGGTTGCGC+TGG 0.574682 3_4:-53697695 None:intergenic
TGAACTTCTCTGATTCTGAA+GGG 0.576518 3_4:+53701728 Msa0506880:CDS
GGTTTAGTAAAGCTAAAGAA+TGG 0.579155 3_4:+53698516 Msa0506880:CDS
CAGCAACAAGCAGAAAATGA+AGG 0.579306 3_4:-53695398 None:intergenic
AGCAGTAAAAGAGGAGACGA+AGG 0.579425 3_4:-53695325 None:intergenic
GAAGGGAATGTTGTTGTCAT+CGG 0.580467 3_4:+53700569 Msa0506880:CDS
CGCACTACGCCTAGCCGTAG+AGG 0.581973 3_4:+53702507 Msa0506880:CDS
ACAATTTCTTCAAATTCACC+AGG 0.582307 3_4:-53700668 None:intergenic
TTATCAACCTCGTGCTCAGG+AGG 0.582847 3_4:-53700545 None:intergenic
CGGCGGAAGCGAGACGACGT+TGG 0.584349 3_4:-53695290 None:intergenic
ATTATTACCTGTGACTCCGT+TGG 0.586873 3_4:+53705002 Msa0506880:three_prime_UTR
GAACTTCTCTGATTCTGAAG+GGG 0.588638 3_4:+53701729 Msa0506880:CDS
TGAGAGGTTGCGCTGGAAGG+AGG 0.589894 3_4:-53697688 None:intergenic
TTTGTGCCCCAATAGGCCTT+AGG 0.590310 3_4:+53700188 Msa0506880:intron
TGATAACTATCCAAGCATAC+CGG 0.590707 3_4:+53701894 Msa0506880:CDS
TCAGAATCAGAGAAGTTCAC+AGG 0.594318 3_4:-53701724 None:intergenic
TGCTTGGATAGTTATCACTT+AGG 0.595028 3_4:-53701888 None:intergenic
TAAATCAAGGATGTCAACGT+TGG 0.595227 3_4:-53696401 None:intergenic
AGCCACACGTTCAAGGAGAA+GGG 0.595447 3_4:+53704553 Msa0506880:CDS
CATTATATTGATGGAAGCAG+AGG 0.595714 3_4:+53699313 Msa0506880:CDS
AGCACGAGGTTGATAATGAA+GGG 0.596117 3_4:+53700552 Msa0506880:CDS
GCTTCCTTTGGAACAGAATG+CGG 0.596948 3_4:+53696435 Msa0506880:CDS
TCTGCTGTTCTCTCTCTGCA+AGG 0.598133 3_4:-53700719 None:intergenic
GAACAGCAGATTATGTGCAG+TGG 0.601142 3_4:+53700732 Msa0506880:CDS
TAAGGACTTCATACATTAAG+GGG 0.602541 3_4:+53701569 Msa0506880:CDS
GACGAAGGAAACTACGCGGT+CGG 0.602839 3_4:-53695310 None:intergenic
CAAATTCACCAGGAGCCGCA+TGG 0.603584 3_4:-53700658 None:intergenic
AACAGATTCACTCACATCCA+AGG 0.604699 3_4:-53697728 None:intergenic
TGGCTTTGAAAATGAAGACT+GGG 0.604797 3_4:+53701792 Msa0506880:CDS
CCTTCGAGACACCAGCAGAT+CGG 0.606205 3_4:-53698359 None:intergenic
GTCTCAGATGCGTAAGCGTG+CGG 0.606283 3_4:+53702336 Msa0506880:CDS
CGGTCCTCAAGAAGTTGACA+GGG 0.611668 3_4:+53701648 Msa0506880:CDS
GCCTCTATACTAATTAAATG+TGG 0.613343 3_4:-53701592 None:intergenic
TGAATGTGTATCTTCAGAGA+AGG 0.614761 3_4:+53703968 Msa0506880:CDS
GTTGTCGGCATGCAAAGCGA+TGG 0.618770 3_4:-53700436 None:intergenic
TGTTTGCAAACATTTGCAGT+CGG 0.619824 3_4:+53699355 Msa0506880:CDS
AAGGAGAAGGGTAAGGATCG+AGG 0.620325 3_4:+53704565 Msa0506880:CDS
CTCACCGCATTCTGTTCCAA+AGG 0.623895 3_4:-53696439 None:intergenic
GAGCAAGCCTCCTGAGCACG+AGG 0.625792 3_4:+53700538 Msa0506880:CDS
GATGGCTTACCTCTACGGCT+AGG 0.632035 3_4:-53702516 None:intergenic
GAGCAATGATTTATGGGACG+AGG 0.635605 3_4:+53696285 Msa0506880:CDS
TCTAACAGTCTTATCGGCGG+CGG 0.637627 3_4:-53695424 None:intergenic
TTTACCGTATTAACGGGTGT+AGG 0.638613 3_4:-53704632 None:intergenic
ACAGGCGAAACAATCTCACT+TGG 0.638932 3_4:+53701465 Msa0506880:intron
ACAGTCAATGATAACTTGAG+AGG 0.640681 3_4:-53697704 None:intergenic
ATTGATCTTGTGATGTGGCA+CGG 0.642720 3_4:+53701628 Msa0506880:CDS
CGACGTTGGAAGTTGAAGAG+AGG 0.645167 3_4:-53695276 None:intergenic
GAAGGAAACTACGCGGTCGG+CGG 0.652571 3_4:-53695307 None:intergenic
ACGGGTGTAGGAACCACAGA+AGG 0.658227 3_4:-53704620 None:intergenic
ATGCATTTATGCTGTTCTTG+GGG 0.658448 3_4:+53701843 Msa0506880:CDS
GCTGAAGTTCCATTTGAGTG+TGG 0.658594 3_4:+53702472 Msa0506880:CDS
AGCATGCCAGATCGTATCTG+AGG 0.658832 3_4:+53695452 Msa0506880:CDS
ACGGCGAAGATGAAAGAGCG+TGG 0.665687 3_4:-53695071 None:intergenic
TTTGCCCTGAAGAAAGCGCA+TGG 0.666320 3_4:-53700801 None:intergenic
CATTAATTGATCTTGTGATG+TGG 0.666350 3_4:+53701623 Msa0506880:CDS
TCAAACGGTGACACAGCAGA+AGG 0.669228 3_4:+53698564 Msa0506880:CDS
CATCTGAGACACCATAAAAG+GGG 0.671973 3_4:-53702323 None:intergenic
TCTCAATACCAAATGGCCAA+CGG 0.678875 3_4:-53705018 None:intergenic
TTCCAGCTATGCGTTCAATG+TGG 0.679058 3_4:+53702272 Msa0506880:CDS
GAAGCAGTGAGTGAAAACTC+TGG 0.680430 3_4:+53702418 Msa0506880:CDS
AGTTCCATTTGAGTGTGGTG+AGG 0.698415 3_4:+53702477 Msa0506880:CDS
AAATCTAACAGTCTTATCGG+CGG 0.703856 3_4:-53695427 None:intergenic
AGTTAAATATGTAGCTAACG+TGG 0.709647 3_4:+53704797 Msa0506880:exon
AGTAAGCGAGTCTGTCATGG+AGG 0.714491 3_4:+53698479 Msa0506880:CDS
AGGACCATAATTCTTCGGAG+AGG 0.720024 3_4:+53698327 Msa0506880:CDS
ATTAGCAAAGAAAGTCCATG+CGG 0.752414 3_4:+53700643 Msa0506880:CDS
GGTACGAGACAAGATCCATG+TGG 0.780307 3_4:+53696330 Msa0506880:CDS
AGGAGACGAAGGAAACTACG+CGG 0.857713 3_4:-53695314 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTTATTTTTGACAA+AGG - chr3_4:53696727-53696746 None:intergenic 10.0%
!! AATATAAATGATTCATTTAA+TGG - chr3_4:53697172-53697191 None:intergenic 10.0%
!! ATATCTCAAAATAATTAAAA+AGG - chr3_4:53698168-53698187 None:intergenic 10.0%
!! TTTCAAAAACAAATATAAAA+TGG + chr3_4:53698664-53698683 Msa0506880:intron 10.0%
!! TTTAAACTAAAATTTCATAT+TGG - chr3_4:53698977-53698996 None:intergenic 10.0%
!! GAGAAATAAAAAAAAAAAAA+TGG - chr3_4:53699411-53699430 None:intergenic 10.0%
!! AAAATAAAAAGTAAAAATGA+TGG - chr3_4:53702174-53702193 None:intergenic 10.0%
!!! TTTAAAAGAAACTTATTTTA+AGG + chr3_4:53702831-53702850 Msa0506880:intron 10.0%
!!! ATCTAATTTTTAAATTTAGT+TGG - chr3_4:53704217-53704236 None:intergenic 10.0%
!!! AAATGAGTTTAAGTTTTAAA+TGG + chr3_4:53695582-53695601 Msa0506880:intron 15.0%
!! TATTATTGAGAATTTAAACA+TGG + chr3_4:53695698-53695717 Msa0506880:intron 15.0%
!! CAATTAATAAACACATTAAT+TGG - chr3_4:53695869-53695888 None:intergenic 15.0%
!!! CTTACAAAATAAAAATGTTT+TGG + chr3_4:53696881-53696900 Msa0506880:intron 15.0%
!!! TTATATAGTTTTTATGTGTA+TGG + chr3_4:53697325-53697344 Msa0506880:intron 15.0%
!! TATTTACAAATTACACTTTA+AGG - chr3_4:53697832-53697851 None:intergenic 15.0%
!! TTAAATTATTGAAAGATGAA+TGG + chr3_4:53698388-53698407 Msa0506880:CDS 15.0%
!!! AATCATGTTCTTTTAATTTA+TGG + chr3_4:53699621-53699640 Msa0506880:intron 15.0%
!! CAAAAAATAATAAACACAAA+AGG - chr3_4:53700090-53700109 None:intergenic 15.0%
!!! CTTTTGTGTTTATTATTTTT+TGG + chr3_4:53699755-53699774 Msa0506880:intron 15.0%
!! GAAGTATAATTATTACTATT+AGG + chr3_4:53700127-53700146 Msa0506880:intron 15.0%
!! AATCATAAATCTCAATAATT+TGG - chr3_4:53700170-53700189 None:intergenic 15.0%
!! GCAAGAATTAAATATAAATT+TGG + chr3_4:53701058-53701077 Msa0506880:intron 15.0%
!!! ATTTCATTGCATTTTTAATT+CGG - chr3_4:53701265-53701284 None:intergenic 15.0%
!! TTTACGAAATAAAACAATTA+AGG - chr3_4:53702225-53702244 None:intergenic 15.0%
!!! TAATTTTAACTATAAGAATC+TGG - chr3_4:53703419-53703438 None:intergenic 15.0%
!!! TTTTTAGTTTGTTAGGTTTT+AGG + chr3_4:53695523-53695542 Msa0506880:intron 20.0%
!! TTAATAATTGTAGATAGATC+TGG + chr3_4:53695808-53695827 Msa0506880:intron 20.0%
!!! TTAATGAGTTGGATTAAATA+TGG + chr3_4:53696085-53696104 Msa0506880:intron 20.0%
!!! TCACTATTTTTGTTATGATT+TGG + chr3_4:53696208-53696227 Msa0506880:intron 20.0%
!!! TGATTTTGTAGATAATATTG+CGG + chr3_4:53696242-53696261 Msa0506880:intron 20.0%
!! AAAACATTCAATAATCCAAT+TGG - chr3_4:53696469-53696488 None:intergenic 20.0%
!! AAAATTGTATAACTATCCTT+GGG - chr3_4:53696691-53696710 None:intergenic 20.0%
!!! TTTATTTTGTAAGAGTTTCA+CGG - chr3_4:53696874-53696893 None:intergenic 20.0%
!!! TCTAAGATGAAATGAATAAA+TGG - chr3_4:53696907-53696926 None:intergenic 20.0%
!! ACTTATTTACTTTATACTAC+CGG + chr3_4:53697227-53697246 Msa0506880:intron 20.0%
!!! TATAGTCTTATTATTGGAAT+TGG + chr3_4:53697533-53697552 Msa0506880:intron 20.0%
!!! ACATTTTCAAGTTTAATAAC+AGG - chr3_4:53697632-53697651 None:intergenic 20.0%
!! ACATGGTAATAAATTGTAAT+TGG + chr3_4:53698122-53698141 Msa0506880:intron 20.0%
!! TCAAAATAATTAAAAAGGAC+TGG - chr3_4:53698163-53698182 None:intergenic 20.0%
!! TTGAGCAAAATATGTTAAAA+AGG - chr3_4:53698251-53698270 None:intergenic 20.0%
!! ATCATTATTCATAACAAACA+CGG - chr3_4:53698704-53698723 None:intergenic 20.0%
!! TGTTATGAATAATGATTATG+AGG + chr3_4:53698708-53698727 Msa0506880:intron 20.0%
!! CAAAATAAAGTAAGACAATT+AGG - chr3_4:53698858-53698877 None:intergenic 20.0%
!! ATTGTACAAAAAGTTATTGA+TGG + chr3_4:53699009-53699028 Msa0506880:intron 20.0%
!! TTGTACAAAAAGTTATTGAT+GGG + chr3_4:53699010-53699029 Msa0506880:intron 20.0%
!! CAATAACATATGCATTAAAA+TGG - chr3_4:53699655-53699674 None:intergenic 20.0%
!!! CATTTTAATGCATATGTTAT+TGG + chr3_4:53699653-53699672 Msa0506880:intron 20.0%
!! CCAAAAATAATAAACACAAA+AGG - chr3_4:53699757-53699776 None:intergenic 20.0%
!!! CCTTTTGTGTTTATTATTTT+TGG + chr3_4:53699754-53699773 Msa0506880:intron 20.0%
!! AATCATAAATCTCAGTAATT+TGG - chr3_4:53699830-53699849 None:intergenic 20.0%
!!! AATCATGCTCTTTTAATTTA+TGG + chr3_4:53699954-53699973 Msa0506880:intron 20.0%
!! CAATAACATATGCATTAAAA+TGG - chr3_4:53699655-53699674 None:intergenic 20.0%
!!! CATTTTAATGCATATGTTAT+TGG + chr3_4:53699653-53699672 Msa0506880:intron 20.0%
!! ATAAATCTCAATAATTTGGA+TGG - chr3_4:53700166-53700185 None:intergenic 20.0%
!!! GTGTTTTAGTTTACAATAAT+AGG + chr3_4:53700984-53701003 Msa0506880:intron 20.0%
!!! ATAATTGTAGATTTTGTTTG+AGG + chr3_4:53701400-53701419 Msa0506880:intron 20.0%
!!! TAATTGTAGATTTTGTTTGA+GGG + chr3_4:53701401-53701420 Msa0506880:intron 20.0%
!! ATTGTTTACTAACTATTTAC+TGG + chr3_4:53701425-53701444 Msa0506880:intron 20.0%
!! GTAAGATATGATATTCAAAT+AGG - chr3_4:53702197-53702216 None:intergenic 20.0%
!!! AGTTTCCTCATAATTTTTAT+GGG - chr3_4:53703933-53703952 None:intergenic 20.0%
!!! AAGTTTCCTCATAATTTTTA+TGG - chr3_4:53703934-53703953 None:intergenic 20.0%
!!! GTTTTCCTTCAAAAAAAAAT+AGG - chr3_4:53704460-53704479 None:intergenic 20.0%
!!! ATTTTTTTTTGAAGGAAAAC+TGG + chr3_4:53704460-53704479 Msa0506880:intron 20.0%
!! TCTTCAAATTCATCAATTAT+GGG - chr3_4:53704722-53704741 None:intergenic 20.0%
!! TCTAAATCTAACAGTCTTAT+CGG - chr3_4:53695433-53695452 None:intergenic 25.0%
!!! TCTTCTGTTTTTAGTTTGTT+AGG + chr3_4:53695516-53695535 Msa0506880:intron 25.0%
! TAAGTTAGACTCAATTATGA+AGG + chr3_4:53695665-53695684 Msa0506880:intron 25.0%
! TTGAAAAGATTGTGGAAAAT+AGG + chr3_4:53695929-53695948 Msa0506880:intron 25.0%
!! TAGTTTCTTATAGCTTTTCA+AGG - chr3_4:53696047-53696066 None:intergenic 25.0%
!! TGTTTTGTGTATACTGTATA+GGG + chr3_4:53696525-53696544 Msa0506880:intron 25.0%
! ATTAATAGAAGTTCATCTGA+GGG + chr3_4:53696558-53696577 Msa0506880:intron 25.0%
! GTTAATTTCTTATACTAGCA+AGG + chr3_4:53696603-53696622 Msa0506880:intron 25.0%
!! CTACTTGAAATTTTTGTATC+AGG + chr3_4:53696648-53696667 Msa0506880:intron 25.0%
! CAAAATTGTATAACTATCCT+TGG - chr3_4:53696692-53696711 None:intergenic 25.0%
! ATCAAAAACACAATGCAATA+GGG - chr3_4:53696811-53696830 None:intergenic 25.0%
! AATCAAAAACACAATGCAAT+AGG - chr3_4:53696812-53696831 None:intergenic 25.0%
! CTTATTTACTTTATACTACC+GGG + chr3_4:53697228-53697247 Msa0506880:intron 25.0%
! TCTTTCTTTATTCATTAACC+TGG + chr3_4:53697488-53697507 Msa0506880:intron 25.0%
!!! CTTGTGTATAGTCTTATTAT+TGG + chr3_4:53697527-53697546 Msa0506880:intron 25.0%
!!! TGGTCTAGAATTTTTTAAAC+AGG + chr3_4:53697895-53697914 Msa0506880:intron 25.0%
! CAAAATATGTTAAAAAGGAC+CGG - chr3_4:53698246-53698265 None:intergenic 25.0%
! AAAAGGCAAAGATTACAAAA+AGG - chr3_4:53698277-53698296 None:intergenic 25.0%
!! AGATACTTCAAAAGTTCTAA+AGG - chr3_4:53698438-53698457 None:intergenic 25.0%
! ATAGTAGATATTTACGTGAA+TGG - chr3_4:53698893-53698912 None:intergenic 25.0%
! TGTACAAAAAGTTATTGATG+GGG + chr3_4:53699011-53699030 Msa0506880:intron 25.0%
! AAATTTCGTGAGAAGATTTA+TGG + chr3_4:53699099-53699118 Msa0506880:intron 25.0%
! ATATGCAAAGCAGTAAATTA+TGG - chr3_4:53699259-53699278 None:intergenic 25.0%
! TGCTTTGCATATTAATTGTA+GGG + chr3_4:53699267-53699286 Msa0506880:intron 25.0%
!! TTCCTTTTATCTCATATTAG+TGG + chr3_4:53699434-53699453 Msa0506880:intron 25.0%
! AACCACTAATATGAGATAAA+AGG - chr3_4:53699439-53699458 None:intergenic 25.0%
!!! ATGGTATTTTTGTACAGAAT+TGG + chr3_4:53699548-53699567 Msa0506880:intron 25.0%
!!! TGGTATTTTTGTACAGAATT+GGG + chr3_4:53699549-53699568 Msa0506880:intron 25.0%
! ATGTTATATCCCAAAAGAAA+AGG + chr3_4:53699575-53699594 Msa0506880:intron 25.0%
! TGTTATATCCCAAAAGAAAA+GGG + chr3_4:53699576-53699595 Msa0506880:intron 25.0%
! GAAGTATAATTATCACCATT+TGG + chr3_4:53699792-53699811 Msa0506880:intron 25.0%
! ATAAATCTCAGTAATTTGGA+TGG - chr3_4:53699826-53699845 None:intergenic 25.0%
! GTAAGAAATTTACTTTCTGA+TGG + chr3_4:53701331-53701350 Msa0506880:intron 25.0%
!! GACATTCTTGATCTTTTATA+CGG + chr3_4:53701769-53701788 Msa0506880:CDS 25.0%
! CTAAATTAGCTAATTGTACA+GGG - chr3_4:53702028-53702047 None:intergenic 25.0%
! TCTAAATTAGCTAATTGTAC+AGG - chr3_4:53702029-53702048 None:intergenic 25.0%
!!! GTTTTATTTCGTAAATACAG+AGG + chr3_4:53702230-53702249 Msa0506880:intron 25.0%
! TTTAACAAACTTCATGTTTG+TGG - chr3_4:53702541-53702560 None:intergenic 25.0%
! GCAATTAAAACAGAATTATG+TGG - chr3_4:53702660-53702679 None:intergenic 25.0%
!!! TCTGTTTTAATTGCTTCTAA+AGG + chr3_4:53702666-53702685 Msa0506880:intron 25.0%
! AATATGATATCTGCATATCA+TGG + chr3_4:53702741-53702760 Msa0506880:intron 25.0%
!! AATATCTTAATGAGTTGAAC+AGG + chr3_4:53702882-53702901 Msa0506880:intron 25.0%
!! ATATCTTAATGAGTTGAACA+GGG + chr3_4:53702883-53702902 Msa0506880:intron 25.0%
!!! AGGGAAAGTTGATTTTTAAT+GGG + chr3_4:53702902-53702921 Msa0506880:intron 25.0%
!!! TACTCAATTTTAATAGTGCA+CGG + chr3_4:53702945-53702964 Msa0506880:intron 25.0%
! TGAATAAAGTTACTCCAATT+TGG + chr3_4:53703124-53703143 Msa0506880:intron 25.0%
! TTATCAGTAAATGCAATTAG+AGG + chr3_4:53703393-53703412 Msa0506880:intron 25.0%
!!! ACCTTTTTGTTGTATATTCT+TGG + chr3_4:53703442-53703461 Msa0506880:intron 25.0%
! TCCAAGAATATACAACAAAA+AGG - chr3_4:53703446-53703465 None:intergenic 25.0%
! TATATGAATTTCATGTCAGA+TGG + chr3_4:53703731-53703750 Msa0506880:intron 25.0%
!! AGAAGAAGTTAATCTCATTT+TGG + chr3_4:53704067-53704086 Msa0506880:CDS 25.0%
!! GAAGAAGTTAATCTCATTTT+GGG + chr3_4:53704068-53704087 Msa0506880:CDS 25.0%
! ATATTATTATGATTGATGCG+AGG + chr3_4:53704161-53704180 Msa0506880:intron 25.0%
!!! ACCATCCTATTTTTTTTTGA+AGG + chr3_4:53704452-53704471 Msa0506880:intron 25.0%
! TCCTTCAAAAAAAAATAGGA+TGG - chr3_4:53704456-53704475 None:intergenic 25.0%
! CTCTTCAAATTCATCAATTA+TGG - chr3_4:53704723-53704742 None:intergenic 25.0%
! CATAATTGATGAATTTGAAG+AGG + chr3_4:53704721-53704740 Msa0506880:CDS 25.0%
!! TATTGTTTGATTTAGATTGC+AGG + chr3_4:53704866-53704885 Msa0506880:three_prime_UTR 25.0%
! TTCCACAATCTTTTCAAAAC+AGG - chr3_4:53695926-53695945 None:intergenic 30.0%
AGATCTAGAGATTAATGAGT+TGG + chr3_4:53696074-53696093 Msa0506880:intron 30.0%
AGAAGTGAGCAATGATTTAT+GGG + chr3_4:53696279-53696298 Msa0506880:CDS 30.0%
TGATAGAATGTATGAAGGTT+AGG + chr3_4:53696308-53696327 Msa0506880:CDS 30.0%
GATAGAATGTATGAAGGTTA+GGG + chr3_4:53696309-53696328 Msa0506880:CDS 30.0%
GCATCTCAAGAAATAAATCA+AGG - chr3_4:53696417-53696436 None:intergenic 30.0%
! CTGTTTTGTGTATACTGTAT+AGG + chr3_4:53696524-53696543 Msa0506880:intron 30.0%
GATTAATAGAAGTTCATCTG+AGG + chr3_4:53696557-53696576 Msa0506880:intron 30.0%
GCTTAGCATTGTAATATCAT+TGG + chr3_4:53696625-53696644 Msa0506880:intron 30.0%
! TGCTTTAATGATTTTACCCA+AGG + chr3_4:53696672-53696691 Msa0506880:intron 30.0%
!! TGCATTGTGTTTTTGATTAG+CGG + chr3_4:53696814-53696833 Msa0506880:intron 30.0%
! CGTTGTCATTTAGAATTTCA+TGG - chr3_4:53696999-53697018 None:intergenic 30.0%
AGAAAAATAACAAGACAGGA+GGG - chr3_4:53697029-53697048 None:intergenic 30.0%
TAGAAAAATAACAAGACAGG+AGG - chr3_4:53697030-53697049 None:intergenic 30.0%
GAGTAGAAAAATAACAAGAC+AGG - chr3_4:53697033-53697052 None:intergenic 30.0%
AGTCCAAAAAGTGATAGAAA+AGG - chr3_4:53697123-53697142 None:intergenic 30.0%
TATACACAAGATTCAAGACT+CGG - chr3_4:53697517-53697536 None:intergenic 30.0%
TTAAACTTGAAAATGTGTGC+AGG + chr3_4:53697636-53697655 Msa0506880:intron 30.0%
AATTTCCTCTTCAAAGCTTA+AGG + chr3_4:53697782-53697801 Msa0506880:CDS 30.0%
!! ATTTACCTTAAGCTTTGAAG+AGG - chr3_4:53697790-53697809 None:intergenic 30.0%
TTCAAAGCTTAAGGTAAATG+TGG + chr3_4:53697791-53697810 Msa0506880:intron 30.0%
TTGTCTACTCTTGAAATCAT+TGG + chr3_4:53697861-53697880 Msa0506880:intron 30.0%
! AATCATTGGTCTAGAATCAT+TGG + chr3_4:53697875-53697894 Msa0506880:intron 30.0%
!!! ATTTTTTAAACAGGAGCACA+TGG + chr3_4:53697904-53697923 Msa0506880:intron 30.0%
!!! TTTTTTAAACAGGAGCACAT+GGG + chr3_4:53697905-53697924 Msa0506880:intron 30.0%
! AACCAGTAATGGAAAATCAA+CGG - chr3_4:53697967-53697986 None:intergenic 30.0%
ATACAAACTGTAACCAGTAA+TGG - chr3_4:53697978-53697997 None:intergenic 30.0%
TAGATTCAATGTCTTAGAAG+AGG - chr3_4:53698092-53698111 None:intergenic 30.0%
GAATCTATTGACATTTGACA+TGG + chr3_4:53698105-53698124 Msa0506880:intron 30.0%
CCTATAAATACATCTGTCAA+CGG + chr3_4:53698201-53698220 Msa0506880:intron 30.0%
GGTTTAGTAAAGCTAAAGAA+TGG + chr3_4:53698516-53698535 Msa0506880:CDS 30.0%
! TGACTTTTTATGCGCATTTT+AGG - chr3_4:53698954-53698973 None:intergenic 30.0%
CCTACAAGCTAAAAAATAAC+AGG - chr3_4:53699201-53699220 None:intergenic 30.0%
!!! CCTGTTATTTTTTAGCTTGT+AGG + chr3_4:53699198-53699217 Msa0506880:intron 30.0%
!! TTTAGCTTGTAGGTTAGATT+AGG + chr3_4:53699208-53699227 Msa0506880:intron 30.0%
AGATTAGGATTTAACCTGAT+TGG + chr3_4:53699223-53699242 Msa0506880:intron 30.0%
CTGCTTTGCATATTAATTGT+AGG + chr3_4:53699266-53699285 Msa0506880:intron 30.0%
GCTTTGCATATTAATTGTAG+GGG + chr3_4:53699268-53699287 Msa0506880:intron 30.0%
TTGCCAAATAGCAGAAATAT+GGG + chr3_4:53699468-53699487 Msa0506880:intron 30.0%
ATCTTTATCAGTCAGTATCA+TGG + chr3_4:53699529-53699548 Msa0506880:intron 30.0%
! CAATTAGTCCCTTTTCTTTT+GGG - chr3_4:53699587-53699606 None:intergenic 30.0%
ACAAAAGGATACTAGAAAGA+CGG - chr3_4:53699742-53699761 None:intergenic 30.0%
ACAAAAGGATACTAGAAAGA+AGG - chr3_4:53699742-53699761 None:intergenic 30.0%
!!! CAGGAAGAATTTTTTCTAGA+AGG - chr3_4:53700283-53700302 None:intergenic 30.0%
CTGGTACGTATAAGTTTATT+CGG + chr3_4:53700348-53700367 Msa0506880:intron 30.0%
TACGTATAAGTTTATTCGGA+TGG + chr3_4:53700352-53700371 Msa0506880:intron 30.0%
CTTAAGTATGCATTAGAGTT+GGG - chr3_4:53700388-53700407 None:intergenic 30.0%
ACTTAAGTATGCATTAGAGT+TGG - chr3_4:53700389-53700408 None:intergenic 30.0%
TTTCTTTGCTAATTTGGCTA+TGG - chr3_4:53700636-53700655 None:intergenic 30.0%
ATGGACTTTCTTTGCTAATT+TGG - chr3_4:53700642-53700661 None:intergenic 30.0%
ACAATTTCTTCAAATTCACC+AGG - chr3_4:53700671-53700690 None:intergenic 30.0%
TAAAAGGCCAATAAGAGAAA+GGG - chr3_4:53700765-53700784 None:intergenic 30.0%
!! ACACTGCATTTTTCAGTAAA+AGG - chr3_4:53700781-53700800 None:intergenic 30.0%
TCGAAGAATAGTTCATTCTT+TGG + chr3_4:53701152-53701171 Msa0506880:intron 30.0%
TTACTACAATGTACATACTG+CGG - chr3_4:53701315-53701334 None:intergenic 30.0%
! AATTTACTTTCTGATGGACA+AGG + chr3_4:53701337-53701356 Msa0506880:intron 30.0%
!! CGATTTGATAATTTGCTTCA+GGG + chr3_4:53701365-53701384 Msa0506880:intron 30.0%
TTACTAACTATTTACTGGTG+CGG + chr3_4:53701430-53701449 Msa0506880:intron 30.0%
TGTTTCAAAAGTTCAGCATT+TGG - chr3_4:53701547-53701566 None:intergenic 30.0%
CTAAGGACTTCATACATTAA+GGG + chr3_4:53701568-53701587 Msa0506880:CDS 30.0%
TAAGGACTTCATACATTAAG+GGG + chr3_4:53701569-53701588 Msa0506880:CDS 30.0%
GCCACATTTAATTAGTATAG+AGG + chr3_4:53701591-53701610 Msa0506880:CDS 30.0%
GCCTCTATACTAATTAAATG+TGG - chr3_4:53701595-53701614 None:intergenic 30.0%
CATTTAATTAGTATAGAGGC+TGG + chr3_4:53701595-53701614 Msa0506880:CDS 30.0%
CATTAATTGATCTTGTGATG+TGG + chr3_4:53701623-53701642 Msa0506880:CDS 30.0%
ATTTCTTGTCACAGTTTACT+TGG - chr3_4:53701696-53701715 None:intergenic 30.0%
! ATTCTTGATCTTTTATACGG+TGG + chr3_4:53701772-53701791 Msa0506880:CDS 30.0%
TCATCTTCATTGCTAGTTAA+AGG - chr3_4:53701823-53701842 None:intergenic 30.0%
AATGCATTTATGCTGTTCTT+GGG + chr3_4:53701842-53701861 Msa0506880:CDS 30.0%
ATGTATCAGAAAATATGCAC+AGG + chr3_4:53701968-53701987 Msa0506880:intron 30.0%
TTGAATATCATATCTTACGC+CGG + chr3_4:53702199-53702218 Msa0506880:intron 30.0%
CGAAATAAAACAATTAAGGC+CGG - chr3_4:53702221-53702240 None:intergenic 30.0%
! AATACAGAGGTGTATATTGA+AGG + chr3_4:53702243-53702262 Msa0506880:intron 30.0%
TCAGTCTCTTTAACGAATAA+TGG - chr3_4:53702400-53702419 None:intergenic 30.0%
TCACCTAACTTGATATTCAA+AGG + chr3_4:53702584-53702603 Msa0506880:intron 30.0%
!! CAGGGAAAGTTGATTTTTAA+TGG + chr3_4:53702901-53702920 Msa0506880:intron 30.0%
!! GGGAAAGTTGATTTTTAATG+GGG + chr3_4:53702903-53702922 Msa0506880:intron 30.0%
!! ACACATTTTAGCACAGAAAA+AGG + chr3_4:53702988-53703007 Msa0506880:intron 30.0%
!! CACATTTTAGCACAGAAAAA+GGG + chr3_4:53702989-53703008 Msa0506880:intron 30.0%
GTTTGGACAAAAGATTAAAG+TGG - chr3_4:53703058-53703077 None:intergenic 30.0%
TGTCCAAACATTGCATAAAA+TGG + chr3_4:53703069-53703088 Msa0506880:intron 30.0%
! GTTCCATTTTATGCAATGTT+TGG - chr3_4:53703075-53703094 None:intergenic 30.0%
! TAAAATGGAACCTAGGATTT+TGG + chr3_4:53703084-53703103 Msa0506880:intron 30.0%
ATAATTCAGTCCAAAATCCT+AGG - chr3_4:53703097-53703116 None:intergenic 30.0%
! TTTTGGACTGAATTATTGTG+CGG + chr3_4:53703101-53703120 Msa0506880:intron 30.0%
CTAAATTAGCTCATCCAAAT+TGG - chr3_4:53703141-53703160 None:intergenic 30.0%
TTAGCTTCTTCAAAATTGTG+CGG + chr3_4:53703157-53703176 Msa0506880:intron 30.0%
GTAAGTAACTTAACCCATTT+GGG - chr3_4:53703320-53703339 None:intergenic 30.0%
AAACTGAAAATAGTCTGAAC+TGG + chr3_4:53703569-53703588 Msa0506880:intron 30.0%
AACTGAAAATAGTCTGAACT+GGG + chr3_4:53703570-53703589 Msa0506880:intron 30.0%
AGCAGAATTAAGCAATATAG+TGG - chr3_4:53703640-53703659 None:intergenic 30.0%
ACTATATTGCTTAATTCTGC+TGG + chr3_4:53703639-53703658 Msa0506880:intron 30.0%
TCTTTCTCTTCACTGTATAA+CGG - chr3_4:53703704-53703723 None:intergenic 30.0%
! TTTTTCTTTCCTCTCTGTTA+AGG + chr3_4:53703806-53703825 Msa0506880:intron 30.0%
! TACTTGTCTCACTTCATTTT+CGG + chr3_4:53703892-53703911 Msa0506880:CDS 30.0%
! ATTTTCGGTTATCAGAACAA+GGG + chr3_4:53703907-53703926 Msa0506880:CDS 30.0%
TGTTAAAGAATTGAAACGCA+TGG + chr3_4:53703995-53704014 Msa0506880:CDS 30.0%
GTCAATTGTCATTAGATGAT+CGG - chr3_4:53704021-53704040 None:intergenic 30.0%
ATCATCTAATGACAATTGAC+AGG + chr3_4:53704021-53704040 Msa0506880:CDS 30.0%
ATCAATTATGGGTGATCTAA+TGG - chr3_4:53704711-53704730 None:intergenic 30.0%
ACATATTTAACTAGACTGGT+TGG - chr3_4:53704789-53704808 None:intergenic 30.0%
AGCTACATATTTAACTAGAC+TGG - chr3_4:53704793-53704812 None:intergenic 30.0%
AGTTAAATATGTAGCTAACG+TGG + chr3_4:53704797-53704816 Msa0506880:exon 30.0%
GTAGAACATAATGCAGATTA+GGG - chr3_4:53705067-53705086 None:intergenic 30.0%
AGTAGAACATAATGCAGATT+AGG - chr3_4:53705068-53705087 None:intergenic 30.0%
!! TTTGAGATAAGCGATTTTCG+TGG - chr3_4:53695122-53695141 None:intergenic 35.0%
AATTAGGGATTTGGAGAAAG+CGG - chr3_4:53695256-53695275 None:intergenic 35.0%
GAAGTTGAAGAGAGGAATTA+GGG - chr3_4:53695271-53695290 None:intergenic 35.0%
! AAATCTAACAGTCTTATCGG+CGG - chr3_4:53695430-53695449 None:intergenic 35.0%
!!! AGCCTGTTTTGAAAAGATTG+TGG + chr3_4:53695921-53695940 Msa0506880:intron 35.0%
AGATTGTGGAAAATAGGCTT+AGG + chr3_4:53695935-53695954 Msa0506880:intron 35.0%
! TGGTTTGTGATAGAAAGCTA+TGG + chr3_4:53696105-53696124 Msa0506880:intron 35.0%
GTAGATAATATTGCGGTTAC+CGG + chr3_4:53696249-53696268 Msa0506880:intron 35.0%
CAGAAGTGAGCAATGATTTA+TGG + chr3_4:53696278-53696297 Msa0506880:CDS 35.0%
TAAATCAAGGATGTCAACGT+TGG - chr3_4:53696404-53696423 None:intergenic 35.0%
ATTTCTTGAGATGCTTCCTT+TGG + chr3_4:53696423-53696442 Msa0506880:CDS 35.0%
AAAGCACAAACAGAAACAGA+GGG - chr3_4:53696963-53696982 None:intergenic 35.0%
! AAAAGCACAAACAGAAACAG+AGG - chr3_4:53696964-53696983 None:intergenic 35.0%
!!! TCTGTTTCTGTTTGTGCTTT+TGG + chr3_4:53696963-53696982 Msa0506880:intron 35.0%
!! TGGCCTTTTCTATCACTTTT+TGG + chr3_4:53697117-53697136 Msa0506880:intron 35.0%
TTGCTATCAATACTCAAACC+CGG - chr3_4:53697249-53697268 None:intergenic 35.0%
CATACCACTATAGTGTTTCA+GGG + chr3_4:53697410-53697429 Msa0506880:intron 35.0%
ATACCACTATAGTGTTTCAG+GGG + chr3_4:53697411-53697430 Msa0506880:intron 35.0%
AGATTAAGCAATGTAGCCAA+TGG - chr3_4:53697453-53697472 None:intergenic 35.0%
! AGATCTGCATGGAACATTTT+AGG + chr3_4:53697557-53697576 Msa0506880:intron 35.0%
!!! TGCATGGAACATTTTAGGAT+TGG + chr3_4:53697562-53697581 Msa0506880:intron 35.0%
ACAGTCAATGATAACTTGAG+AGG - chr3_4:53697707-53697726 None:intergenic 35.0%
! AGTTATCATTGACTGTACCT+TGG + chr3_4:53697711-53697730 Msa0506880:CDS 35.0%
TGATTTCAAGAGTAGACAAG+TGG - chr3_4:53697860-53697879 None:intergenic 35.0%
TGCATTGTATGTGCACTTTA+GGG - chr3_4:53698007-53698026 None:intergenic 35.0%
TTGCATTGTATGTGCACTTT+AGG - chr3_4:53698008-53698027 None:intergenic 35.0%
AAAGTGCACATACAATGCAA+AGG + chr3_4:53698008-53698027 Msa0506880:intron 35.0%
! CAATGTCTTAGAAGAGGTAT+AGG - chr3_4:53698086-53698105 None:intergenic 35.0%
CCGTTGACAGATGTATTTAT+AGG - chr3_4:53698204-53698223 None:intergenic 35.0%
ATAAATACATCTGTCAACGG+TGG + chr3_4:53698204-53698223 Msa0506880:intron 35.0%
!! TGGATTTCCTATTGTTTTGC+CGG + chr3_4:53698224-53698243 Msa0506880:intron 35.0%
!! TCTTTGCCTTTTTATTTGCC+TGG + chr3_4:53698285-53698304 Msa0506880:intron 35.0%
CAGAAACCAGGCAAATAAAA+AGG - chr3_4:53698294-53698313 None:intergenic 35.0%
!! TGGCTTATAAAGTGCTGTAA+TGG + chr3_4:53698408-53698427 Msa0506880:CDS 35.0%
CAGCAGCATATAACATCAAA+CGG + chr3_4:53698549-53698568 Msa0506880:CDS 35.0%
ATTTATGGAACTGGTCAATC+AGG + chr3_4:53699114-53699133 Msa0506880:intron 35.0%
TGCATATTAATTGTAGGGGA+AGG + chr3_4:53699272-53699291 Msa0506880:intron 35.0%
GCATATTAATTGTAGGGGAA+GGG + chr3_4:53699273-53699292 Msa0506880:intron 35.0%
CATATTAATTGTAGGGGAAG+GGG + chr3_4:53699274-53699293 Msa0506880:intron 35.0%
TCCACCAAGCATTATATTGA+TGG + chr3_4:53699304-53699323 Msa0506880:CDS 35.0%
TCCATCAATATAATGCTTGG+TGG - chr3_4:53699308-53699327 None:intergenic 35.0%
GCTTCCATCAATATAATGCT+TGG - chr3_4:53699311-53699330 None:intergenic 35.0%
CATTATATTGATGGAAGCAG+AGG + chr3_4:53699313-53699332 Msa0506880:CDS 35.0%
TGTTTGCAAACATTTGCAGT+CGG + chr3_4:53699355-53699374 Msa0506880:CDS 35.0%
GTTGCCAAATAGCAGAAATA+TGG + chr3_4:53699467-53699486 Msa0506880:intron 35.0%
! GCAATTAGTCCCTTTTCTTT+TGG - chr3_4:53699588-53699607 None:intergenic 35.0%
TGGATGGAAAAAAGTCCAAA+TGG - chr3_4:53699810-53699829 None:intergenic 35.0%
! TTTATGATTTGTGCCCCAAT+AGG + chr3_4:53699841-53699860 Msa0506880:intron 35.0%
!! AGTTGATGAGTACATAGAGT+TGG + chr3_4:53700307-53700326 Msa0506880:CDS 35.0%
GTGTCCAATCTAATATTTGC+AGG + chr3_4:53700407-53700426 Msa0506880:intron 35.0%
TGGTCCTGCAAATATTAGAT+TGG - chr3_4:53700414-53700433 None:intergenic 35.0%
!! TTTTGGTGGAGATACTGATT+GGG + chr3_4:53700604-53700623 Msa0506880:CDS 35.0%
ATTAGCAAAGAAAGTCCATG+CGG + chr3_4:53700643-53700662 Msa0506880:CDS 35.0%
ATACACACCCTTTCTCTTAT+TGG + chr3_4:53700755-53700774 Msa0506880:CDS 35.0%
GTAAAAGGCCAATAAGAGAA+AGG - chr3_4:53700766-53700785 None:intergenic 35.0%
AAAGATTGGAGTAGTTCTTC+AGG - chr3_4:53700836-53700855 None:intergenic 35.0%
TCCAATCTTTACTTCTTCCT+GGG + chr3_4:53700846-53700865 Msa0506880:CDS 35.0%
ATCAGTCAGAATTCAGAACA+AGG - chr3_4:53701033-53701052 None:intergenic 35.0%
ATCGTTGTTCATTTAGCCAT+GGG - chr3_4:53701213-53701232 None:intergenic 35.0%
TATCGTTGTTCATTTAGCCA+TGG - chr3_4:53701214-53701233 None:intergenic 35.0%
!! GCGATTTGATAATTTGCTTC+AGG + chr3_4:53701364-53701383 Msa0506880:intron 35.0%
AGAATTGCTGTAAGATGTCT+TGG + chr3_4:53701496-53701515 Msa0506880:CDS 35.0%
TAAGATGTCTTGGTCTCTTT+GGG + chr3_4:53701506-53701525 Msa0506880:CDS 35.0%
!!! CTGAACTTTTGAAACAGCTA+AGG + chr3_4:53701551-53701570 Msa0506880:CDS 35.0%
GCTAAGGACTTCATACATTA+AGG + chr3_4:53701567-53701586 Msa0506880:CDS 35.0%
TGAACTTCTCTGATTCTGAA+GGG + chr3_4:53701728-53701747 Msa0506880:CDS 35.0%
!! TGGCTTTGAAAATGAAGACT+GGG + chr3_4:53701792-53701811 Msa0506880:CDS 35.0%
GAATGCATTTATGCTGTTCT+TGG + chr3_4:53701841-53701860 Msa0506880:CDS 35.0%
ATGCATTTATGCTGTTCTTG+GGG + chr3_4:53701843-53701862 Msa0506880:CDS 35.0%
TGCTTGGATAGTTATCACTT+AGG - chr3_4:53701891-53701910 None:intergenic 35.0%
TGATAACTATCCAAGCATAC+CGG + chr3_4:53701894-53701913 Msa0506880:CDS 35.0%
! TGAGCTTAGATAAAAGCACA+GGG - chr3_4:53701930-53701949 None:intergenic 35.0%
! ATGAGCTTAGATAAAAGCAC+AGG - chr3_4:53701931-53701950 None:intergenic 35.0%
TATCAGAAAATATGCACAGG+TGG + chr3_4:53701971-53701990 Msa0506880:intron 35.0%
! TAAAATGTTTTTCACCTGCC+AGG + chr3_4:53702049-53702068 Msa0506880:intron 35.0%
TTCACGATTTATGTTGCAGA+TGG + chr3_4:53702366-53702385 Msa0506880:CDS 35.0%
GCAATACTGTCTATAACTTG+TGG - chr3_4:53702454-53702473 None:intergenic 35.0%
ACAAACTTCATGTTTGTGGA+TGG - chr3_4:53702537-53702556 None:intergenic 35.0%
GTGCCTTTGAATATCAAGTT+AGG - chr3_4:53702590-53702609 None:intergenic 35.0%
ACCTTCACCTTAATATGGAT+TGG + chr3_4:53702612-53702631 Msa0506880:intron 35.0%
ACCAATCCATATTAAGGTGA+AGG - chr3_4:53702616-53702635 None:intergenic 35.0%
CCAAGTACCAATCCATATTA+AGG - chr3_4:53702622-53702641 None:intergenic 35.0%
!! CCTTAATATGGATTGGTACT+TGG + chr3_4:53702619-53702638 Msa0506880:intron 35.0%
!! AATATGGATTGGTACTTGGT+AGG + chr3_4:53702623-53702642 Msa0506880:intron 35.0%
TTCTGTGCTAAAATGTGTAC+AGG - chr3_4:53702986-53703005 None:intergenic 35.0%
CATTGCATAAAATGGAACCT+AGG + chr3_4:53703077-53703096 Msa0506880:intron 35.0%
CTAAATTAGCCCATCCAAAT+TGG + chr3_4:53703221-53703240 Msa0506880:intron 35.0%
CGTAAGTAACTTAACCCATT+TGG - chr3_4:53703321-53703340 None:intergenic 35.0%
ATTTCTTGCAGCATACGAAA+AGG - chr3_4:53703525-53703544 None:intergenic 35.0%
TTTCGTATGCTGCAAGAAAT+TGG + chr3_4:53703525-53703544 Msa0506880:intron 35.0%
! ATTGCGTACTTGTTGAAGTT+TGG + chr3_4:53703604-53703623 Msa0506880:intron 35.0%
CTTTCTCTTCACTGTATAAC+GGG - chr3_4:53703703-53703722 None:intergenic 35.0%
! CATTTTCGGTTATCAGAACA+AGG + chr3_4:53703906-53703925 Msa0506880:CDS 35.0%
AAGGGCCCATAAAAATTATG+AGG + chr3_4:53703925-53703944 Msa0506880:CDS 35.0%
TGAATGTGTATCTTCAGAGA+AGG + chr3_4:53703968-53703987 Msa0506880:CDS 35.0%
TCATGAAAGAAAGCCTGAAA+AGG - chr3_4:53704258-53704277 None:intergenic 35.0%
AGATAAATGTTAGCCGTAAG+AGG - chr3_4:53704429-53704448 None:intergenic 35.0%
AGCTAACGTGGTATATGTAA+TGG + chr3_4:53704809-53704828 Msa0506880:three_prime_UTR 35.0%
! AACTTGCTCTCAATACCAAA+TGG - chr3_4:53705028-53705047 None:intergenic 35.0%
TTCATCTTCGCCGTTAACAA+TGG + chr3_4:53695080-53695099 Msa0506880:exon 40.0%
! TCGGTGTCTTCCATTGTTAA+CGG - chr3_4:53695093-53695112 None:intergenic 40.0%
! AGATAAGCGATTTTCGTGGT+CGG - chr3_4:53695118-53695137 None:intergenic 40.0%
! GAGAGAGTTCTTTGAGTTTG+CGG - chr3_4:53695194-53695213 None:intergenic 40.0%
! AATGGGAAGTGGATTTGGAT+CGG - chr3_4:53695221-53695240 None:intergenic 40.0%
! ATGAGAATGGGAAGTGGATT+TGG - chr3_4:53695226-53695245 None:intergenic 40.0%
GAAGAAATGAGAATGGGAAG+TGG - chr3_4:53695232-53695251 None:intergenic 40.0%
AGCGGAGAAGAAATGAGAAT+GGG - chr3_4:53695238-53695257 None:intergenic 40.0%
AAGCGGAGAAGAAATGAGAA+TGG - chr3_4:53695239-53695258 None:intergenic 40.0%
GAAGAGAGGAATTAGGGATT+TGG - chr3_4:53695265-53695284 None:intergenic 40.0%
GGAAGTTGAAGAGAGGAATT+AGG - chr3_4:53695272-53695291 None:intergenic 40.0%
CAGCAACAAGCAGAAAATGA+AGG - chr3_4:53695401-53695420 None:intergenic 40.0%
TTTGTAGTTCGTCTTGAACG+TGG - chr3_4:53695636-53695655 None:intergenic 40.0%
TGTGGAAAATAGGCTTAGGT+AGG + chr3_4:53695939-53695958 Msa0506880:intron 40.0%
GTACATCTGTAGCATGAAGA+CGG + chr3_4:53695989-53696008 Msa0506880:intron 40.0%
CGAGGTGATAGAATGTATGA+AGG + chr3_4:53696303-53696322 Msa0506880:CDS 40.0%
! TGGTTCGTACTTTTGCAGTT+AGG + chr3_4:53696350-53696369 Msa0506880:CDS 40.0%
! GGTTCGTACTTTTGCAGTTA+GGG + chr3_4:53696351-53696370 Msa0506880:CDS 40.0%
AATGCGGTGAGTATTCCAAT+TGG + chr3_4:53696451-53696470 Msa0506880:intron 40.0%
AGCACAACTGATACAAGCAT+GGG - chr3_4:53696506-53696525 None:intergenic 40.0%
! ATGCAATAGGGTTTTGCGTA+AGG - chr3_4:53696799-53696818 None:intergenic 40.0%
!! TGTTTTTGATTAGCGGCTGA+TGG + chr3_4:53696821-53696840 Msa0506880:intron 40.0%
AAGCACAAACAGAAACAGAG+GGG - chr3_4:53696962-53696981 None:intergenic 40.0%
! TGCAAAAAGAACCTCTGGAA+AGG - chr3_4:53697088-53697107 None:intergenic 40.0%
AAGGTTGCAAAAAGAACCTC+TGG - chr3_4:53697093-53697112 None:intergenic 40.0%
! TTCTTTTTGCAACCTTCCAG+TGG + chr3_4:53697097-53697116 Msa0506880:intron 40.0%
AAAGTGATAGAAAAGGCCAC+TGG - chr3_4:53697116-53697135 None:intergenic 40.0%
TTTGGACTCCATCATCATAC+TGG + chr3_4:53697135-53697154 Msa0506880:intron 40.0%
CCTGAAACACTATAGTGGTA+TGG - chr3_4:53697412-53697431 None:intergenic 40.0%
CCATACCACTATAGTGTTTC+AGG + chr3_4:53697409-53697428 Msa0506880:intron 40.0%
TTGGAATTGGAAGATCTGCA+TGG + chr3_4:53697546-53697565 Msa0506880:intron 40.0%
AACAGATTCACTCACATCCA+AGG - chr3_4:53697731-53697750 None:intergenic 40.0%
AGCTTAAGGTAAATGTGGTC+TGG + chr3_4:53697796-53697815 Msa0506880:intron 40.0%
!!! CTCCGTTGATTTTCCATTAC+TGG + chr3_4:53697962-53697981 Msa0506880:intron 40.0%
! CTTAGAAGAGGTATAGGCAA+GGG - chr3_4:53698080-53698099 None:intergenic 40.0%
! TCTTAGAAGAGGTATAGGCA+AGG - chr3_4:53698081-53698100 None:intergenic 40.0%
AAAAGGACCGGCAAAACAAT+AGG - chr3_4:53698234-53698253 None:intergenic 40.0%
AGCTCAGGACCATAATTCTT+CGG + chr3_4:53698322-53698341 Msa0506880:CDS 40.0%
AAGTCCTCTCCGAAGAATTA+TGG - chr3_4:53698334-53698353 None:intergenic 40.0%
!! AGACTCGCTTACTGATTCAT+AGG - chr3_4:53698472-53698491 None:intergenic 40.0%
CGTTTGATGTTATATGCTGC+TGG - chr3_4:53698551-53698570 None:intergenic 40.0%
CGTGAGAAGATTTATGGAAC+TGG + chr3_4:53699105-53699124 Msa0506880:intron 40.0%
TAACAGGTAAGTTGTCATCC+TGG - chr3_4:53699185-53699204 None:intergenic 40.0%
! GTGCCCATATTTCTGCTATT+TGG - chr3_4:53699474-53699493 None:intergenic 40.0%
AACATGATTAACGCGAGTGT+TGG - chr3_4:53699610-53699629 None:intergenic 40.0%
! TTATGATTTGTGCCCCAATC+AGG + chr3_4:53699842-53699861 Msa0506880:intron 40.0%
ATATACTTCTGCTTCGGTAC+CGG - chr3_4:53699894-53699913 None:intergenic 40.0%
TGCAGCATATACTTCTGCTT+CGG - chr3_4:53699900-53699919 None:intergenic 40.0%
AGCATGATTAACACGAGTGT+TGG - chr3_4:53699943-53699962 None:intergenic 40.0%
ATATACTTCTGCTTCGGTAC+CGG - chr3_4:53699894-53699913 None:intergenic 40.0%
TGCAGCATATACTTCTGCTT+CGG - chr3_4:53699900-53699919 None:intergenic 40.0%
ATGTACTCATCAACTGAAGC+AGG - chr3_4:53700302-53700321 None:intergenic 40.0%
ATACGTACCAGCAACGATAT+GGG - chr3_4:53700339-53700358 None:intergenic 40.0%
TATACGTACCAGCAACGATA+TGG - chr3_4:53700340-53700359 None:intergenic 40.0%
CACCAAGCAAAAGTAGTTGT+CGG - chr3_4:53700454-53700473 None:intergenic 40.0%
!! AGCACGAGGTTGATAATGAA+GGG + chr3_4:53700552-53700571 Msa0506880:CDS 40.0%
GAAGGGAATGTTGTTGTCAT+CGG + chr3_4:53700569-53700588 Msa0506880:CDS 40.0%
AATGTTGTTGTCATCGGAGA+TGG + chr3_4:53700575-53700594 Msa0506880:CDS 40.0%
! ATCGGAGATGGCTTAAGTTT+TGG + chr3_4:53700587-53700606 Msa0506880:CDS 40.0%
!! GTTTTGGTGGAGATACTGAT+TGG + chr3_4:53700603-53700622 Msa0506880:CDS 40.0%
CTCCAATCTTTACTTCTTCC+TGG + chr3_4:53700845-53700864 Msa0506880:CDS 40.0%
CCAATCTTTACTTCTTCCTG+GGG + chr3_4:53700847-53700866 Msa0506880:CDS 40.0%
TCGTTGTTCATTTAGCCATG+GGG - chr3_4:53701212-53701231 None:intergenic 40.0%
GTAAGATGTCTTGGTCTCTT+TGG + chr3_4:53701505-53701524 Msa0506880:CDS 40.0%
ATTGATCTTGTGATGTGGCA+CGG + chr3_4:53701628-53701647 Msa0506880:CDS 40.0%
AAAACCCTGTCAACTTCTTG+AGG - chr3_4:53701655-53701674 None:intergenic 40.0%
TTGTCACAGTTTACTTGGCT+TGG - chr3_4:53701691-53701710 None:intergenic 40.0%
TCAGAATCAGAGAAGTTCAC+AGG - chr3_4:53701727-53701746 None:intergenic 40.0%
GTGAACTTCTCTGATTCTGA+AGG + chr3_4:53701727-53701746 Msa0506880:CDS 40.0%
! GAACTTCTCTGATTCTGAAG+GGG + chr3_4:53701729-53701748 Msa0506880:CDS 40.0%
!! GTGGCTTTGAAAATGAAGAC+TGG + chr3_4:53701791-53701810 Msa0506880:CDS 40.0%
ATTTATGCTGTTCTTGGGGA+AGG + chr3_4:53701847-53701866 Msa0506880:CDS 40.0%
! AGATAAGCATTGCTTCAACC+TGG - chr3_4:53702070-53702089 None:intergenic 40.0%
!! CTTGTGATTTGTTGAGGCAT+GGG - chr3_4:53702110-53702129 None:intergenic 40.0%
! TCAATGTGGCCAGGAATTTT+TGG + chr3_4:53702286-53702305 Msa0506880:CDS 40.0%
!!! CCAGGAATTTTTGGCAATTC+CGG + chr3_4:53702295-53702314 Msa0506880:CDS 40.0%
!!! CAGGAATTTTTGGCAATTCC+GGG + chr3_4:53702296-53702315 Msa0506880:CDS 40.0%
!!! AGGAATTTTTGGCAATTCCG+GGG + chr3_4:53702297-53702316 Msa0506880:CDS 40.0%
! CATCTGAGACACCATAAAAG+GGG - chr3_4:53702326-53702345 None:intergenic 40.0%
! GCATCTGAGACACCATAAAA+GGG - chr3_4:53702327-53702346 None:intergenic 40.0%
CACACACCTTCACCTTAATA+TGG + chr3_4:53702607-53702626 Msa0506880:intron 40.0%
AGTAACTTAACCCATTTGGG+TGG - chr3_4:53703317-53703336 None:intergenic 40.0%
TTCCCATATGTAACATGCAC+AGG - chr3_4:53703551-53703570 None:intergenic 40.0%
AAATAGTCTGAACTGGGTGT+TGG + chr3_4:53703576-53703595 Msa0506880:intron 40.0%
TAATTCTGCTGGATGTCACT+TGG + chr3_4:53703650-53703669 Msa0506880:intron 40.0%
GAGGAAACTTCTATGTCGTA+TGG + chr3_4:53703944-53703963 Msa0506880:CDS 40.0%
ATGCTTACATGCCTAGACTT+TGG + chr3_4:53704124-53704143 Msa0506880:intron 40.0%
CACAACTAGAACCAAAGTCT+AGG - chr3_4:53704138-53704157 None:intergenic 40.0%
!! CTAGACTTTGGTTCTAGTTG+TGG + chr3_4:53704136-53704155 Msa0506880:intron 40.0%
!! ACACGAAGTATCACCTTTTC+AGG + chr3_4:53704242-53704261 Msa0506880:intron 40.0%
! TGTTAGCCGTAAGAGGTTTT+CGG - chr3_4:53704422-53704441 None:intergenic 40.0%
AGAAGATTCTCAACCTTCTG+TGG + chr3_4:53704607-53704626 Msa0506880:CDS 40.0%
! TTTACCGTATTAACGGGTGT+AGG - chr3_4:53704635-53704654 None:intergenic 40.0%
ACACCCGTTAATACGGTAAA+AGG + chr3_4:53704635-53704654 Msa0506880:CDS 40.0%
! CGACCTTTTACCGTATTAAC+GGG - chr3_4:53704641-53704660 None:intergenic 40.0%
! GCGACCTTTTACCGTATTAA+CGG - chr3_4:53704642-53704661 None:intergenic 40.0%
CATTTGCTTGTGCAAGTCAT+AGG + chr3_4:53704922-53704941 Msa0506880:three_prime_UTR 40.0%
ATTATTACCTGTGACTCCGT+TGG + chr3_4:53705002-53705021 Msa0506880:three_prime_UTR 40.0%
TCTCAATACCAAATGGCCAA+CGG - chr3_4:53705021-53705040 None:intergenic 40.0%
GATTCGAACTTCGTCGAAGA+TGG - chr3_4:53695154-53695173 None:intergenic 45.0%
AGCAGTAAAAGAGGAGACGA+AGG - chr3_4:53695328-53695347 None:intergenic 45.0%
! TCTCCTCTTTTACTGCTGCT+CGG + chr3_4:53695331-53695350 Msa0506880:CDS 45.0%
TCGTTACCTCAGATACGATC+TGG - chr3_4:53695461-53695480 None:intergenic 45.0%
AGATAGATCTGGCTGTAGTG+CGG + chr3_4:53695819-53695838 Msa0506880:intron 45.0%
GGAAAATAGGCTTAGGTAGG+TGG + chr3_4:53695942-53695961 Msa0506880:intron 45.0%
GAGGATAGTTGGATCACTAG+AGG + chr3_4:53696011-53696030 Msa0506880:intron 45.0%
GATAGTTGGATCACTAGAGG+CGG + chr3_4:53696014-53696033 Msa0506880:intron 45.0%
CTATGTGGAGTTGGCTAGAT+GGG - chr3_4:53696141-53696160 None:intergenic 45.0%
ACTATGTGGAGTTGGCTAGA+TGG - chr3_4:53696142-53696161 None:intergenic 45.0%
ATCTAGCCAACTCCACATAG+TGG + chr3_4:53696141-53696160 Msa0506880:intron 45.0%
TCTAGCCAACTCCACATAGT+GGG + chr3_4:53696142-53696161 Msa0506880:intron 45.0%
CTTATCCCACTATGTGGAGT+TGG - chr3_4:53696150-53696169 None:intergenic 45.0%
! CAACTCCACATAGTGGGATA+AGG + chr3_4:53696148-53696167 Msa0506880:intron 45.0%
TTGCTCACTTCTGCATCATC+CGG - chr3_4:53696271-53696290 None:intergenic 45.0%
GAGCAATGATTTATGGGACG+AGG + chr3_4:53696285-53696304 Msa0506880:CDS 45.0%
! CTGCAAAAGTACGAACCACA+TGG - chr3_4:53696348-53696367 None:intergenic 45.0%
!! GCTTCCTTTGGAACAGAATG+CGG + chr3_4:53696435-53696454 Msa0506880:CDS 45.0%
CACAACTGATACAAGCATGG+GGG - chr3_4:53696504-53696523 None:intergenic 45.0%
GCACAACTGATACAAGCATG+GGG - chr3_4:53696505-53696524 None:intergenic 45.0%
CAGCACAACTGATACAAGCA+TGG - chr3_4:53696507-53696526 None:intergenic 45.0%
GAAGTTCATCTGAGGGTTTG+AGG + chr3_4:53696565-53696584 Msa0506880:intron 45.0%
! GGGTTTGAGGTCACAGTTAT+TGG + chr3_4:53696578-53696597 Msa0506880:intron 45.0%
TGATAGAAAAGGCCACTGGA+AGG - chr3_4:53697112-53697131 None:intergenic 45.0%
CACTCTCTCCAGTATGATGA+TGG - chr3_4:53697146-53697165 None:intergenic 45.0%
TGGTATGGCGCGTAATGATA+TGG - chr3_4:53697397-53697416 None:intergenic 45.0%
AGACCCCTGAAACACTATAG+TGG - chr3_4:53697417-53697436 None:intergenic 45.0%
TCTGCTGCTCTATTCACCAT+TGG + chr3_4:53697434-53697453 Msa0506880:intron 45.0%
! AGATTCAAGACTCGGTAACC+AGG - chr3_4:53697509-53697528 None:intergenic 45.0%
! AAACAGGAGCACATGGGTAA+TGG + chr3_4:53697911-53697930 Msa0506880:intron 45.0%
AGCTTAATGCTGCAGAAACC+AGG - chr3_4:53698306-53698325 None:intergenic 45.0%
GTTTCTGCAGCATTAAGCTC+AGG + chr3_4:53698307-53698326 Msa0506880:intron 45.0%
AGGACCATAATTCTTCGGAG+AGG + chr3_4:53698327-53698346 Msa0506880:CDS 45.0%
ATCAGTAAGCGAGTCTGTCA+TGG + chr3_4:53698476-53698495 Msa0506880:CDS 45.0%
!! ATGGAGGCACTTCTAAAAGC+TGG + chr3_4:53698495-53698514 Msa0506880:CDS 45.0%
TATGGAACTGGTCAATCAGG+TGG + chr3_4:53699117-53699136 Msa0506880:intron 45.0%
TCAATCAGGTGGAGTGATTG+AGG + chr3_4:53699128-53699147 Msa0506880:intron 45.0%
TCAGGAAACTACATCCAACG+AGG - chr3_4:53699159-53699178 None:intergenic 45.0%
GATGTAGTTTCCTGAATGCC+AGG + chr3_4:53699164-53699183 Msa0506880:intron 45.0%
AAGTTGTCATCCTGGCATTC+AGG - chr3_4:53699177-53699196 None:intergenic 45.0%
AAGCAGAGGCTGCACTTTAT+TGG + chr3_4:53699327-53699346 Msa0506880:CDS 45.0%
ATCAGAGCCTAAGCCTGATT+GGG - chr3_4:53699858-53699877 None:intergenic 45.0%
ATCAGAGCCTAAGGCCTATT+GGG - chr3_4:53700198-53700217 None:intergenic 45.0%
!! TGCCGACAACTACTTTTGCT+TGG + chr3_4:53700449-53700468 Msa0506880:CDS 45.0%
TCATTATCAACCTCGTGCTC+AGG - chr3_4:53700551-53700570 None:intergenic 45.0%
!! GAGCACGAGGTTGATAATGA+AGG + chr3_4:53700551-53700570 Msa0506880:CDS 45.0%
!! GGAGATGGCTTAAGTTTTGG+TGG + chr3_4:53700590-53700609 Msa0506880:CDS 45.0%
GAACAGCAGATTATGTGCAG+TGG + chr3_4:53700732-53700751 Msa0506880:CDS 45.0%
CCCCAGGAAGAAGTAAAGAT+TGG - chr3_4:53700850-53700869 None:intergenic 45.0%
!! CTGCAACAATTTGTTACCCC+AGG - chr3_4:53700866-53700885 None:intergenic 45.0%
ACAGGCGAAACAATCTCACT+TGG + chr3_4:53701465-53701484 Msa0506880:intron 45.0%
! TCTTGGTCTCTTTGGGCTTT+TGG + chr3_4:53701513-53701532 Msa0506880:CDS 45.0%
CAGGGCAAGAATAGTACGAA+GGG - chr3_4:53702010-53702029 None:intergenic 45.0%
ACAGGGCAAGAATAGTACGA+AGG - chr3_4:53702011-53702030 None:intergenic 45.0%
!! CCTTGTGATTTGTTGAGGCA+TGG - chr3_4:53702111-53702130 None:intergenic 45.0%
CCATGCCTCAACAAATCACA+AGG + chr3_4:53702108-53702127 Msa0506880:intron 45.0%
!! GCTTGCCTTGTGATTTGTTG+AGG - chr3_4:53702116-53702135 None:intergenic 45.0%
TTCCAGCTATGCGTTCAATG+TGG + chr3_4:53702272-53702291 Msa0506880:CDS 45.0%
CCGGAATTGCCAAAAATTCC+TGG - chr3_4:53702298-53702317 None:intergenic 45.0%
!!! GGAATTTTTGGCAATTCCGG+GGG + chr3_4:53702298-53702317 Msa0506880:CDS 45.0%
! CGCATCTGAGACACCATAAA+AGG - chr3_4:53702328-53702347 None:intergenic 45.0%
GAAGCAGTGAGTGAAAACTC+TGG + chr3_4:53702418-53702437 Msa0506880:CDS 45.0%
GCTGAAGTTCCATTTGAGTG+TGG + chr3_4:53702472-53702491 Msa0506880:CDS 45.0%
AGTTCCATTTGAGTGTGGTG+AGG + chr3_4:53702477-53702496 Msa0506880:CDS 45.0%
TTGTGGATGGCTTACCTCTA+CGG - chr3_4:53702524-53702543 None:intergenic 45.0%
ATCTCAGGTTCGATTCTCAC+CGG - chr3_4:53703249-53703268 None:intergenic 45.0%
GCATACGAAAAGGCTTCACT+AGG - chr3_4:53703515-53703534 None:intergenic 45.0%
TGGCCTGTGCATGTTACATA+TGG + chr3_4:53703545-53703564 Msa0506880:intron 45.0%
GGCCTGTGCATGTTACATAT+GGG + chr3_4:53703546-53703565 Msa0506880:intron 45.0%
!! GTTTTCGGGAGGGAAAAGTA+CGG - chr3_4:53704407-53704426 None:intergenic 45.0%
! GTTAGCCGTAAGAGGTTTTC+GGG - chr3_4:53704421-53704440 None:intergenic 45.0%
ACTCGACTTCAACCTGGATT+TGG + chr3_4:53704484-53704503 Msa0506880:CDS 45.0%
!! CAACAGAAGCATCCAAATCC+AGG - chr3_4:53704499-53704518 None:intergenic 45.0%
GGTTCCTACACCCGTTAATA+CGG + chr3_4:53704628-53704647 Msa0506880:CDS 45.0%
!! ATAAAAACTATATAAAAAAA+AGG - chr3_4:53697320-53697339 None:intergenic 5.0%
CGACGTTGGAAGTTGAAGAG+AGG - chr3_4:53695279-53695298 None:intergenic 50.0%
AGGAGACGAAGGAAACTACG+CGG - chr3_4:53695317-53695336 None:intergenic 50.0%
GTTCCGAGCAGCAGTAAAAG+AGG - chr3_4:53695337-53695356 None:intergenic 50.0%
! TCTAACAGTCTTATCGGCGG+CGG - chr3_4:53695427-53695446 None:intergenic 50.0%
AGCATGCCAGATCGTATCTG+AGG + chr3_4:53695452-53695471 Msa0506880:CDS 50.0%
CATCTGTAGCATGAAGACGG+AGG + chr3_4:53695992-53696011 Msa0506880:intron 50.0%
GCATGAAGACGGAGGATAGT+TGG + chr3_4:53696000-53696019 Msa0506880:intron 50.0%
! CCAAGCCTTATCCCACTATG+TGG - chr3_4:53696156-53696175 None:intergenic 50.0%
! CCACATAGTGGGATAAGGCT+TGG + chr3_4:53696153-53696172 Msa0506880:intron 50.0%
GGTACGAGACAAGATCCATG+TGG + chr3_4:53696330-53696349 Msa0506880:CDS 50.0%
CTCACCGCATTCTGTTCCAA+AGG - chr3_4:53696442-53696461 None:intergenic 50.0%
GGCTGTAGCGCTACCAATAA+CGG + chr3_4:53696842-53696861 Msa0506880:intron 50.0%
GATAACTTGAGAGGTTGCGC+TGG - chr3_4:53697698-53697717 None:intergenic 50.0%
AGTAAGCGAGTCTGTCATGG+AGG + chr3_4:53698479-53698498 Msa0506880:CDS 50.0%
TCAAACGGTGACACAGCAGA+AGG + chr3_4:53698564-53698583 Msa0506880:CDS 50.0%
ATGGTAAGCAGCTGCCAATC+AGG - chr3_4:53699240-53699259 None:intergenic 50.0%
TTTGTGCCCCAATCAGGCTT+AGG + chr3_4:53699848-53699867 Msa0506880:intron 50.0%
TCAGAGCCTAAGCCTGATTG+GGG - chr3_4:53699857-53699876 None:intergenic 50.0%
CATCAGAGCCTAAGCCTGAT+TGG - chr3_4:53699859-53699878 None:intergenic 50.0%
TTTGTGCCCCAATAGGCCTT+AGG + chr3_4:53700188-53700207 Msa0506880:intron 50.0%
TCAGAGCCTAAGGCCTATTG+GGG - chr3_4:53700197-53700216 None:intergenic 50.0%
CATCAGAGCCTAAGGCCTAT+TGG - chr3_4:53700199-53700218 None:intergenic 50.0%
! AGCTGCTAGTGTGTTTCTGC+AGG + chr3_4:53700508-53700527 Msa0506880:CDS 50.0%
TTATCAACCTCGTGCTCAGG+AGG - chr3_4:53700548-53700567 None:intergenic 50.0%
TCTGCTGTTCTCTCTCTGCA+AGG - chr3_4:53700722-53700741 None:intergenic 50.0%
AGTGTCCATGCGCTTTCTTC+AGG + chr3_4:53700796-53700815 Msa0506880:CDS 50.0%
GTGTCCATGCGCTTTCTTCA+GGG + chr3_4:53700797-53700816 Msa0506880:CDS 50.0%
! TTTGCCCTGAAGAAAGCGCA+TGG - chr3_4:53700804-53700823 None:intergenic 50.0%
GTTGCACGAATAGTTCCCCA+TGG + chr3_4:53701194-53701213 Msa0506880:intron 50.0%
GTGCGGACAATGAAATGCAC+AGG + chr3_4:53701447-53701466 Msa0506880:intron 50.0%
!! GTCTCTTTGGGCTTTTGGAG+AGG + chr3_4:53701518-53701537 Msa0506880:CDS 50.0%
ACGGTCCTCAAGAAGTTGAC+AGG + chr3_4:53701647-53701666 Msa0506880:CDS 50.0%
CGGTCCTCAAGAAGTTGACA+GGG + chr3_4:53701648-53701667 Msa0506880:CDS 50.0%
TGCAAAGAAGCCGGTATGCT+TGG - chr3_4:53701907-53701926 None:intergenic 50.0%
! AAGCATTGCTTCAACCTGGC+AGG - chr3_4:53702066-53702085 None:intergenic 50.0%
TCCATTTGAGTGTGGTGAGG+AGG + chr3_4:53702480-53702499 Msa0506880:CDS 50.0%
CCATTTGAGTGTGGTGAGGA+GGG + chr3_4:53702481-53702500 Msa0506880:CDS 50.0%
CATTTGAGTGTGGTGAGGAG+GGG + chr3_4:53702482-53702501 Msa0506880:CDS 50.0%
TAGCCCATCCAAATTGGCAC+CGG + chr3_4:53703227-53703246 Msa0506880:intron 50.0%
! TCACCGGTGCCAATTTGGAT+GGG - chr3_4:53703233-53703252 None:intergenic 50.0%
! GATTCTCACCGGTGCCAATT+TGG - chr3_4:53703238-53703257 None:intergenic 50.0%
GAATCGAACCTGAGATCTCG+AGG + chr3_4:53703253-53703272 Msa0506880:intron 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG - chr3_4:53703297-53703316 None:intergenic 50.0%
TTTGGGTGGCCTAGTGGTAT+TGG - chr3_4:53703303-53703322 None:intergenic 50.0%
ATACCACTAGGCCACCCAAA+TGG + chr3_4:53703303-53703322 Msa0506880:intron 50.0%
TACCACTAGGCCACCCAAAT+GGG + chr3_4:53703304-53703323 Msa0506880:intron 50.0%
AGCTTGCGACCTTAACAGAG+AGG - chr3_4:53703818-53703837 None:intergenic 50.0%
GAAGAAGACAGCTGCTGAGA+AGG + chr3_4:53703845-53703864 Msa0506880:CDS 50.0%
TCCCTCCCGAAAACCTCTTA+CGG + chr3_4:53704413-53704432 Msa0506880:intron 50.0%
ACTGGAACTCGACTTCAACC+TGG + chr3_4:53704478-53704497 Msa0506880:CDS 50.0%
AGCCACACGTTCAAGGAGAA+GGG + chr3_4:53704553-53704572 Msa0506880:CDS 50.0%
TACCCTTCTCCTTGAACGTG+TGG - chr3_4:53704558-53704577 None:intergenic 50.0%
CACGTTCAAGGAGAAGGGTA+AGG + chr3_4:53704558-53704577 Msa0506880:CDS 50.0%
AAGGAGAAGGGTAAGGATCG+AGG + chr3_4:53704565-53704584 Msa0506880:CDS 50.0%
GGCAGACGACATCTTGTTCA+TGG - chr3_4:53704690-53704709 None:intergenic 50.0%
ACGGCGAAGATGAAAGAGCG+TGG - chr3_4:53695074-53695093 None:intergenic 55.0%
! GCGATTTTCGTGGTCGGTGT+CGG - chr3_4:53695112-53695131 None:intergenic 55.0%
GACGAAGGAAACTACGCGGT+CGG - chr3_4:53695313-53695332 None:intergenic 55.0%
AGTTGGATCACTAGAGGCGG+AGG + chr3_4:53696017-53696036 Msa0506880:intron 55.0%
TTCACGGCAGCAGCCGTTAT+TGG - chr3_4:53696858-53696877 None:intergenic 55.0%
! AACCTCTGGAAAGGCACGCA+TGG - chr3_4:53697079-53697098 None:intergenic 55.0%
ACTTGAGAGGTTGCGCTGGA+AGG - chr3_4:53697694-53697713 None:intergenic 55.0%
CCTTCGAGACACCAGCAGAT+CGG - chr3_4:53698362-53698381 None:intergenic 55.0%
TGATTGAGGCTGTGCCTCGT+TGG + chr3_4:53699142-53699161 Msa0506880:intron 55.0%
CGGCATGCAAAGCGATGGTT+TGG - chr3_4:53700434-53700453 None:intergenic 55.0%
GTTGTCGGCATGCAAAGCGA+TGG - chr3_4:53700439-53700458 None:intergenic 55.0%
AAGAAAGTCCATGCGGCTCC+TGG + chr3_4:53700650-53700669 Msa0506880:CDS 55.0%
CAAATTCACCAGGAGCCGCA+TGG - chr3_4:53700661-53700680 None:intergenic 55.0%
AGCACAGGGTGCAAAGAAGC+CGG - chr3_4:53701916-53701935 None:intergenic 55.0%
GGCCACATTGAACGCATAGC+TGG - chr3_4:53702277-53702296 None:intergenic 55.0%
GCTATGCGTTCAATGTGGCC+AGG + chr3_4:53702277-53702296 Msa0506880:CDS 55.0%
! TTCCGGGGGTTCCCCTTTTA+TGG + chr3_4:53702312-53702331 Msa0506880:CDS 55.0%
CACCATAAAAGGGGAACCCC+CGG - chr3_4:53702317-53702336 None:intergenic 55.0%
GTCTCAGATGCGTAAGCGTG+CGG + chr3_4:53702336-53702355 Msa0506880:CDS 55.0%
CCCTCCTCACCACACTCAAA+TGG - chr3_4:53702484-53702503 None:intergenic 55.0%
GATGGCTTACCTCTACGGCT+AGG - chr3_4:53702519-53702538 None:intergenic 55.0%
! CTCACCGGTGCCAATTTGGA+TGG - chr3_4:53703234-53703253 None:intergenic 55.0%
TCGAACCTGAGATCTCGAGG+AGG + chr3_4:53703256-53703275 Msa0506880:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG - chr3_4:53703290-53703309 None:intergenic 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG - chr3_4:53703291-53703310 None:intergenic 55.0%
GGTCCCAAGCCAATACCACT+AGG + chr3_4:53703291-53703310 Msa0506880:intron 55.0%
!! GTGGCCTAGTGGTATTGGCT+TGG - chr3_4:53703298-53703317 None:intergenic 55.0%
AACCCATTTGGGTGGCCTAG+TGG - chr3_4:53703309-53703328 None:intergenic 55.0%
!! GCCGTAAGAGGTTTTCGGGA+GGG - chr3_4:53704417-53704436 None:intergenic 55.0%
!! AGCCGTAAGAGGTTTTCGGG+AGG - chr3_4:53704418-53704437 None:intergenic 55.0%
GGCTGTACAGCTGGTGTTTG+TGG - chr3_4:53704527-53704546 None:intergenic 55.0%
CTTGAACGTGTGGCTCTCGT+TGG - chr3_4:53704548-53704567 None:intergenic 55.0%
CAACGAGAGCCACACGTTCA+AGG + chr3_4:53704546-53704565 Msa0506880:CDS 55.0%
GAGCCACACGTTCAAGGAGA+AGG + chr3_4:53704552-53704571 Msa0506880:CDS 55.0%
ACGGGTGTAGGAACCACAGA+AGG - chr3_4:53704623-53704642 None:intergenic 55.0%
CAAATGGCCAACGGAGTCAC+AGG - chr3_4:53705012-53705031 None:intergenic 55.0%
CTGTGACTCCGTTGGCCATT+TGG + chr3_4:53705010-53705029 Msa0506880:three_prime_UTR 55.0%
GAAGGAAACTACGCGGTCGG+CGG - chr3_4:53695310-53695329 None:intergenic 60.0%
CACCATGCGTGCCTTTCCAG+AGG + chr3_4:53697074-53697093 Msa0506880:intron 60.0%
TGAGAGGTTGCGCTGGAAGG+AGG - chr3_4:53697691-53697710 None:intergenic 60.0%
!! GGACTTGCTGACCGATCTGC+TGG + chr3_4:53698348-53698367 Msa0506880:CDS 60.0%
CCGATCTGCTGGTGTCTCGA+AGG + chr3_4:53698359-53698378 Msa0506880:CDS 60.0%
TCTGATGCTGCAGCCACAGC+CGG + chr3_4:53699872-53699891 Msa0506880:intron 60.0%
!! TTCTGCTTCGGTACCGGCTG+TGG - chr3_4:53699888-53699907 None:intergenic 60.0%
GGCTGCAGCATCAGAGCCTA+AGG - chr3_4:53699867-53699886 None:intergenic 60.0%
TCTGATGCTGCAGCCACAGC+CGG + chr3_4:53699872-53699891 Msa0506880:intron 60.0%
!! TTCTGCTTCGGTACCGGCTG+TGG - chr3_4:53699888-53699907 None:intergenic 60.0%
GTGCTCCTCCTCGAGATCTC+AGG - chr3_4:53703264-53703283 None:intergenic 60.0%
! GCTCTCGTTGGCTGTACAGC+TGG - chr3_4:53704536-53704555 None:intergenic 60.0%
GAGCAAGCCTCCTGAGCACG+AGG + chr3_4:53700538-53700557 Msa0506880:CDS 65.0%
CGCACTACGCCTAGCCGTAG+AGG + chr3_4:53702507-53702526 Msa0506880:CDS 65.0%
! TCGAGGAGGAGCACACTCCC+AGG + chr3_4:53703270-53703289 Msa0506880:intron 65.0%
CGGCGGAAGCGAGACGACGT+TGG - chr3_4:53695293-53695312 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 53695034 53705106 53695034 ID=Msa0506880;Name=Msa0506880
chr3_4 mRNA 53695034 53705106 53695034 ID=Msa0506880-mRNA-1;Parent=Msa0506880;Name=Msa0506880-mRNA-1;_AED=0.08;_eAED=0.08;_QI=65|0.9|0.90|1|1|1|11|304|1003
chr3_4 exon 53695034 53695473 53695034 ID=Msa0506880-mRNA-1:exon:11900;Parent=Msa0506880-mRNA-1
chr3_4 exon 53696253 53696456 53696253 ID=Msa0506880-mRNA-1:exon:11901;Parent=Msa0506880-mRNA-1
chr3_4 exon 53697658 53697803 53697658 ID=Msa0506880-mRNA-1:exon:11902;Parent=Msa0506880-mRNA-1
chr3_4 exon 53698317 53698585 53698317 ID=Msa0506880-mRNA-1:exon:11903;Parent=Msa0506880-mRNA-1
chr3_4 exon 53699288 53699385 53699288 ID=Msa0506880-mRNA-1:exon:11904;Parent=Msa0506880-mRNA-1
chr3_4 exon 53700203 53700350 53700203 ID=Msa0506880-mRNA-1:exon:11905;Parent=Msa0506880-mRNA-1
chr3_4 exon 53700429 53700868 53700429 ID=Msa0506880-mRNA-1:exon:11906;Parent=Msa0506880-mRNA-1
chr3_4 exon 53701469 53701930 53701469 ID=Msa0506880-mRNA-1:exon:11907;Parent=Msa0506880-mRNA-1
chr3_4 exon 53702250 53702528 53702250 ID=Msa0506880-mRNA-1:exon:11908;Parent=Msa0506880-mRNA-1
chr3_4 exon 53703828 53704089 53703828 ID=Msa0506880-mRNA-1:exon:11909;Parent=Msa0506880-mRNA-1
chr3_4 exon 53704474 53705106 53704474 ID=Msa0506880-mRNA-1:exon:11910;Parent=Msa0506880-mRNA-1
chr3_4 five_prime_UTR 53695034 53695098 53695034 ID=Msa0506880-mRNA-1:five_prime_utr;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53695099 53695473 53695099 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53696253 53696456 53696253 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53697658 53697803 53697658 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53698317 53698585 53698317 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53699288 53699385 53699288 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53700203 53700350 53700203 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53700429 53700868 53700429 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53701469 53701930 53701469 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53702250 53702528 53702250 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53703828 53704089 53703828 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 CDS 53704474 53704802 53704474 ID=Msa0506880-mRNA-1:cds;Parent=Msa0506880-mRNA-1
chr3_4 three_prime_UTR 53704803 53705106 53704803 ID=Msa0506880-mRNA-1:three_prime_utr;Parent=Msa0506880-mRNA-1
Gene Sequence

>Msa0506880

ATGGAAGACACCGACACCGACCACGAAAATCGCTTATCTCAAAAAATCGCTTCCATCTTCGACGAAGTTCGAATCTCATACGCAACACACAACCGCAAACTCAAAGAACTCTCTCTTCTCCGATCCAAATCCACTTCCCATTCTCATTTCTTCTCCGCTTTCTCCAAATCCCTAATTCCTCTCTTCAACTTCCAACGTCGTCTCGCTTCCGCCGACCGCGTAGTTTCCTTCGTCTCCTCTTTTACTGCTGCTCGGAACTCTGCAGATGCTGAAGTTTGCGATGAGTTTCTCGATCATTTCCTTCATTTTCTGCTTGTTGCTGCGACCGCCGCCGATAAGACTGTTAGATTTAGAGCATGCCAGATCGTATCTGAGATAATATTGCGGTTACCGGATGATGCAGAAGTGAGCAATGATTTATGGGACGAGGTGATAGAATGTATGAAGGTTAGGGTACGAGACAAGATCCATGTGGTTCGTACTTTTGCAGTTAGGGCGCTTGCGCGTTTTGTGAACGACTCTTCCAACGTTGACATCCTTGATTTATTTCTTGAGATGCTTCCTTTGGAACAGAATGCGGACGTTCGTAAGATGATTGTGTTGTCATTGCCTCCTTCCAGCGCAACCTCTCAAGTTATCATTGACTGTACCTTGGATGTGAGTGAATCTGTTCGCAAAGCAGCATACTGTGTTCTAGCTAATAAATTTCCTCTTCAAAGCTTAAGCATTAAGCTCAGGACCATAATTCTTCGGAGAGGACTTGCTGACCGATCTGCTGGTGTCTCGAAGGAATGTTTTAAATTATTGAAAGATGAATGGCTTATAAAGTGCTGTAATGGTGATCCTTTAGAACTTTTGAAGTATCTAGATGTTGAAACCTATGAATCAGTAAGCGAGTCTGTCATGGAGGCACTTCTAAAAGCTGGTTTAGTAAAGCTAAAGAATGGTGCAAGTATCCAGCAGCATATAACATCAAACGGTGACACAGCAGAAGGGGAAGGGGTTCATTGTCCACCAAGCATTATATTGATGGAAGCAGAGGCTGCACTTTATTGGAGAACTGTTTGCAAACATTTGCAGTCGGAAGCACATGCCTTAGGCTCTGATGCTGCAGCCACAGCCGGTACCGAAGCAGAAGTATATGCTGCAGAAGCATCAGATAAAAATGACCTTCTAGAAAAAATTCTTCCTGCTTCAGTTGATGAGTACATAGAGTTGGTCAGAGCCCATATCGTTGCTGGACCAAACCATCGCTTTGCATGCCGACAACTACTTTTGCTTGGTGCTATGTTTGATTTTTCAGACACTTCATATAGAAAAGCTGCTAGTGTGTTTCTGCAGGAGCTGATGAGCAAGCCTCCTGAGCACGAGGTTGATAATGAAGGGAATGTTGTTGTCATCGGAGATGGCTTAAGTTTTGGTGGAGATACTGATTGGGCAGAAGCCATAGCCAAATTAGCAAAGAAAGTCCATGCGGCTCCTGGTGAATTTGAAGAAATTGTTCTTGCAATCATAGAAAAGCTAGCTCAACCTTGCAGAGAGAGAACAGCAGATTATGTGCAGTGGATACACACCCTTTCTCTTATTGGCCTTTTACTGAAAAATGCAGTGTCCATGCGCTTTCTTCAGGGCAAAGCTATAGAACCTGAAGAACTACTCCAATCTTTACTTCTTCCTGGGGCGAAACAATCTCACTTGGACGTGCAAAGAATTGCTGTAAGATGTCTTGGTCTCTTTGGGCTTTTGGAGAGGAAACCAAATGCTGAACTTTTGAAACAGCTAAGGACTTCATACATTAAGGGGCCACATTTAATTAGTATAGAGGCTGGTAAAGCATTAATTGATCTTGTGATGTGGCACGGTCCTCAAGAAGTTGACAGGGTTTTAAGTCACGATATTCCAAGCCAAGTAAACTGTGACAAGAAATGTTTTGTTCCTGTGAACTTCTCTGATTCTGAAGGGGATTCAAACTCAAATGTTGACATTCTTGATCTTTTATACGGTGGCTTTGAAAATGAAGACTGGGCTAATCCTTTAACTAGCAATGAAGATGAATGCATTTATGCTGTTCTTGGGGAAGGCTTTGCGAAAATTCTTCTCCTAAGTGATAACTATCCAAGCATACCGGCTTCTTTGCACCCTAGGTGTATATTGAAGGCTTTTATTCCAGCTATGCGTTCAATGTGGCCAGGAATTTTTGGCAATTCCGGGGGTTCCCCTTTTATGGTGTCTCAGATGCGTAAGCGTGCGGTTCAAGCTTCACGATTTATGTTGCAGATGGTTCAGATTCCATTATTCGTTAAAGAGACTGAAGCAGTGAGTGAAAACTCTGGTACTGAACATCCACAAGTTATAGACAGTATTGCTGAAGTTCCATTTGAGTGTGGTGAGGAGGGGCTCGCACTACGCCTAGCCGTAGAGGTCGCAAGCTTTCACTCGAAGAAGACAGCTGCTGAGAAGGCATATGTATCTGCATTATGCAAAATACTTGTCTCACTTCATTTTCGGTTATCAGAACAAGGGCCCATAAAAATTATGAGGAAACTTCTATGTCGTATGGCTGAATGTGTATCTTCAGAGAAGGATCTTGTTAAAGAATTGAAACGCATGGCCGATCATCTAATGACAATTGACAGGCAACAAGATCAAGAATTGTTGCAAGAAGAAGTTAATCTCATTTTGGGAAAACTGGAACTCGACTTCAACCTGGATTTGGATGCTTCTGTTGCAATGCCACAAACACCAGCTGTACAGCCAACGAGAGCCACACGTTCAAGGAGAAGGGTAAGGATCGAGGAAGATAGTTCTGATGATGAAGAAGATTCTCAACCTTCTGTGGTTCCTACACCCGTTAATACGGTAAAAGGTCGCTCACAGAGAGCAAGCAAAACTGCAGCCATGAACAAGATGTCGTCTGCCATTAGATCACCCATAATTGATGAATTTGAAGAGGAAGAAGAAGCGTCGAACTTGACATCTGATGATTCTGAAGAATCCAACCAGTCTAGTTAA
Protein sequence

>Msa0506880

MEDTDTDHENRLSQKIASIFDEVRISYATHNRKLKELSLLRSKSTSHSHFFSAFSKSLIPLFNFQRRLASADRVVSFVSSFTAARNSADAEVCDEFLDHFLHFLLVAATAADKTVRFRACQIVSEIILRLPDDAEVSNDLWDEVIECMKVRVRDKIHVVRTFAVRALARFVNDSSNVDILDLFLEMLPLEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTIILRRGLADRSAGVSKECFKLLKDEWLIKCCNGDPLELLKYLDVETYESVSESVMEALLKAGLVKLKNGASIQQHITSNGDTAEGEGVHCPPSIILMEAEAALYWRTVCKHLQSEAHALGSDAAATAGTEAEVYAAEASDKNDLLEKILPASVDEYIELVRAHIVAGPNHRFACRQLLLLGAMFDFSDTSYRKAASVFLQELMSKPPEHEVDNEGNVVVIGDGLSFGGDTDWAEAIAKLAKKVHAAPGEFEEIVLAIIEKLAQPCRERTADYVQWIHTLSLIGLLLKNAVSMRFLQGKAIEPEELLQSLLLPGAKQSHLDVQRIAVRCLGLFGLLERKPNAELLKQLRTSYIKGPHLISIEAGKALIDLVMWHGPQEVDRVLSHDIPSQVNCDKKCFVPVNFSDSEGDSNSNVDILDLLYGGFENEDWANPLTSNEDECIYAVLGEGFAKILLLSDNYPSIPASLHPRCILKAFIPAMRSMWPGIFGNSGGSPFMVSQMRKRAVQASRFMLQMVQIPLFVKETEAVSENSGTEHPQVIDSIAEVPFECGEEGLALRLAVEVASFHSKKTAAEKAYVSALCKILVSLHFRLSEQGPIKIMRKLLCRMAECVSSEKDLVKELKRMADHLMTIDRQQDQELLQEEVNLILGKLELDFNLDLDASVAMPQTPAVQPTRATRSRRRVRIEEDSSDDEEDSQPSVVPTPVNTVKGRSQRASKTAAMNKMSSAIRSPIIDEFEEEEEASNLTSDDSEESNQSS*