AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1106220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106220 MtrunA17_Chr7g0238581 92.319 664 24 1 1 664 1 637 0.0 1253
Msa1106220 MtrunA17_Chr6g0470541 34.632 462 246 13 25 485 5 411 7.26e-64 227
Msa1106220 MtrunA17_Chr6g0470541 42.857 105 54 2 554 656 800 900 6.20e-17 85.1
Msa1106220 MtrunA17_Chr3g0132921 30.676 414 206 10 19 396 3 371 1.31e-48 178
Msa1106220 MtrunA17_Chr1g0182151 31.053 380 202 11 26 380 55 399 4.49e-45 173
Msa1106220 MtrunA17_Chr5g0427481 30.964 394 195 10 19 380 11 359 1.81e-44 171
Msa1106220 MtrunA17_Chr1g0153061 30.923 401 187 12 26 380 9 365 2.17e-44 171
Msa1106220 MtrunA17_Chr3g0134191 31.078 399 189 13 26 380 9 365 3.07e-44 171
Msa1106220 MtrunA17_Chr1g0178411 30.155 388 199 10 26 380 14 362 5.34e-44 170
Msa1106220 MtrunA17_Chr7g0266631 29.948 384 205 9 26 380 10 358 7.16e-44 169
Msa1106220 MtrunA17_Chr2g0327581 30.079 379 206 10 26 380 50 393 1.52e-42 165
Msa1106220 MtrunA17_Chr4g0053211 32.378 349 155 10 85 380 53 373 3.97e-40 158
Msa1106220 MtrunA17_Chr4g0062291 34.409 372 187 16 24 376 122 455 6.33e-40 156
Msa1106220 MtrunA17_Chr2g0307481 31.186 388 212 13 25 396 68 416 8.76e-40 155
Msa1106220 MtrunA17_Chr2g0331761 31.622 370 199 15 22 379 182 509 4.41e-39 153
Msa1106220 MtrunA17_Chr8g0369881 30.685 365 203 9 25 380 875 1198 4.05e-38 152
Msa1106220 MtrunA17_Chr6g0485471 32.162 370 195 15 23 379 113 439 6.70e-38 150
Msa1106220 MtrunA17_Chr1g0191181 29.442 394 218 9 26 402 89 439 1.15e-37 149
Msa1106220 MtrunA17_Chr5g0407791 31.165 369 196 10 25 380 889 1212 3.81e-37 149
Msa1106220 MtrunA17_Chr5g0411971 30.471 361 204 11 26 378 400 721 7.23e-37 148
Msa1106220 MtrunA17_Chr3g0142261 30.851 376 207 10 17 379 8 343 7.41e-37 148
Msa1106220 MtrunA17_Chr5g0421591 30.194 361 205 11 26 378 375 696 3.39e-36 145
Msa1106220 MtrunA17_Chr5g0421521 29.602 402 229 15 26 418 375 731 7.05e-36 145
Msa1106220 MtrunA17_Chr4g0067421 29.255 376 209 11 23 379 203 540 7.07e-36 144
Msa1106220 MtrunA17_Chr2g0295881 29.574 399 207 14 23 387 195 553 9.84e-36 144
Msa1106220 MtrunA17_Chr7g0258991 29.243 383 206 13 11 378 60 392 1.40e-35 144
Msa1106220 MtrunA17_Chr4g0049011 29.787 376 196 11 26 374 280 614 7.36e-35 140
Msa1106220 MtrunA17_Chr5g0398521 28.866 388 206 10 25 382 57 404 1.20e-34 141
Msa1106220 MtrunA17_Chr1g0152231 28.947 380 207 10 23 382 1 337 1.26e-34 140
Msa1106220 MtrunA17_Chr3g0145071 27.390 387 216 10 8 382 87 420 2.80e-34 140
Msa1106220 MtrunA17_Chr7g0245931 28.836 378 218 11 25 382 52 398 3.01e-34 139
Msa1106220 MtrunA17_Chr7g0272871 31.016 374 208 13 16 378 117 451 4.03e-34 139
Msa1106220 MtrunA17_Chr4g0035661 28.696 345 198 9 53 382 99 410 4.71e-34 139
Msa1106220 MtrunA17_Chr2g0312631 30.959 365 200 12 26 378 385 709 1.40e-33 138
Msa1106220 MtrunA17_Chr5g0405181 27.851 377 211 10 25 390 20 346 4.49e-33 136
Msa1106220 MtrunA17_Chr4g0042061 30.027 373 200 10 26 374 433 768 4.73e-33 135
Msa1106220 MtrunA17_Chr3g0122121 28.093 388 206 9 22 380 95 438 7.21e-33 135
Msa1106220 MtrunA17_Chr2g0280421 30.667 375 202 12 26 383 438 771 3.61e-32 133
Msa1106220 MtrunA17_Chr1g0191851 29.752 363 206 11 26 378 148 471 4.75e-32 132
Msa1106220 MtrunA17_Chr4g0036001 28.571 371 202 12 25 379 24 347 6.13e-32 132
Msa1106220 MtrunA17_Chr8g0372171 27.696 408 235 12 25 417 19 381 6.27e-32 132
Msa1106220 MtrunA17_Chr4g0045381 30.795 302 158 6 103 380 258 532 3.32e-31 131
Msa1106220 MtrunA17_Chr2g0322291 28.346 381 205 11 26 380 89 427 5.24e-31 130
Msa1106220 MtrunA17_Chr4g0069141 28.496 379 207 10 26 380 154 492 6.32e-31 130
Msa1106220 MtrunA17_Chr1g0193221 28.080 349 200 10 79 404 39 359 8.98e-31 129
Msa1106220 MtrunA17_Chr7g0271961 30.220 364 193 13 26 374 402 719 1.84e-30 128
Msa1106220 MtrunA17_Chr6g0483701 29.923 391 207 13 12 380 9 354 2.76e-30 127
Msa1106220 MtrunA17_Chr3g0102921 31.117 376 192 13 26 374 439 774 3.76e-30 127
Msa1106220 MtrunA17_Chr8g0377731 27.644 416 215 12 5 380 23 392 4.62e-30 127
Msa1106220 MtrunA17_Chr2g0319271 28.283 396 214 10 26 388 400 758 8.96e-30 125
Msa1106220 MtrunA17_Chr1g0195111 28.989 376 194 12 26 373 397 727 2.38e-29 124
Msa1106220 MtrunA17_Chr5g0447041 29.064 406 190 13 26 374 435 799 3.96e-29 124
Msa1106220 MtrunA17_Chr4g0070001 28.378 370 210 11 21 380 139 463 1.81e-28 122
Msa1106220 MtrunA17_Chr1g0192481 28.931 318 183 7 93 397 115 402 1.45e-27 117
Msa1106220 MtrunA17_Chr8g0386891 40.678 177 75 4 200 374 4 152 3.39e-25 108
Msa1106220 MtrunA17_Chr7g0257301 29.049 389 194 14 26 374 393 739 1.91e-24 109
Msa1106220 MtrunA17_Chr3g0101021 25.307 407 221 12 4 380 57 410 6.23e-23 104
Msa1106220 MtrunA17_Chr1g0187411 24.324 407 207 13 10 378 125 468 6.72e-22 100
Msa1106220 MtrunA17_Chr5g0445211 26.923 416 208 18 3 380 54 411 1.76e-21 100
Msa1106220 MtrunA17_Chr8g0367581 26.596 376 215 16 13 377 134 459 7.63e-17 85.1
Msa1106220 MtrunA17_Chr6g0484501 34.831 178 86 3 199 374 33 182 1.32e-16 79.7
Msa1106220 MtrunA17_Chr8g0390991 35.955 178 84 4 199 374 3 152 3.78e-16 82.0
Msa1106220 MtrunA17_Chr7g0269681 33.862 189 86 5 196 373 37 197 4.50e-16 81.6
Msa1106220 MtrunA17_Chr3g0142841 25.478 314 174 12 94 383 157 434 7.56e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106220 AT5G02370.1 53.213 607 225 12 8 601 4 564 0.0 562
Msa1106220 AT5G23910.2 36.538 312 160 8 64 374 44 318 3.45e-51 189
Msa1106220 AT5G23910.2 52.381 84 40 0 572 655 622 705 6.22e-19 91.7
Msa1106220 AT5G23910.1 36.538 312 160 8 64 374 40 314 4.00e-51 189
Msa1106220 AT5G23910.1 52.381 84 40 0 572 655 618 701 5.92e-19 91.7
Msa1106220 AT3G50240.2 31.591 440 205 14 26 415 26 419 9.98e-46 175
Msa1106220 AT3G50240.4 31.591 440 205 14 26 415 26 419 1.79e-45 175
Msa1106220 AT3G50240.1 31.591 440 205 14 26 415 26 419 1.91e-45 174
Msa1106220 AT3G49650.1 34.324 370 191 10 28 382 17 349 3.54e-45 173
Msa1106220 AT5G60930.2 30.905 398 190 10 26 380 7 362 4.42e-45 174
Msa1106220 AT5G60930.1 30.905 398 190 10 26 380 7 362 4.83e-45 174
Msa1106220 AT5G60930.3 30.905 398 190 10 26 380 7 362 5.16e-45 174
Msa1106220 AT5G47820.2 30.273 403 191 12 26 380 12 372 7.63e-45 173
Msa1106220 AT5G47820.1 30.273 403 191 12 26 380 12 372 7.63e-45 173
Msa1106220 AT2G28620.1 30.402 398 204 12 17 380 36 394 1.41e-44 172
Msa1106220 AT2G28620.3 30.402 398 204 12 17 380 36 394 1.56e-44 172
Msa1106220 AT2G28620.2 30.402 398 204 12 17 380 36 394 1.56e-44 172
Msa1106220 AT3G45850.2 29.243 383 204 10 26 380 56 399 5.00e-43 167
Msa1106220 AT3G45850.1 29.243 383 204 10 26 380 56 399 5.00e-43 167
Msa1106220 AT2G36200.1 29.639 388 201 9 26 380 13 361 5.95e-42 164
Msa1106220 AT2G36200.2 29.639 388 201 9 26 380 13 361 7.28e-42 164
Msa1106220 AT1G18550.1 33.600 375 189 13 22 376 148 482 2.47e-41 160
Msa1106220 AT3G16060.1 31.989 372 195 16 22 379 166 493 4.08e-41 160
Msa1106220 AT2G37420.1 29.974 387 212 10 26 388 49 400 4.18e-41 161
Msa1106220 AT2G37420.2 29.974 387 212 10 26 388 49 400 4.18e-41 161
Msa1106220 AT1G12430.1 29.927 411 219 11 25 406 70 440 6.33e-40 157
Msa1106220 AT1G12430.2 29.927 411 219 11 25 406 70 440 6.63e-40 157
Msa1106220 AT5G65930.1 28.788 396 227 11 25 410 887 1237 1.28e-38 154
Msa1106220 AT5G06670.5 28.796 382 205 12 11 378 57 385 1.33e-38 152
Msa1106220 AT5G65930.2 28.788 396 227 11 25 410 888 1238 1.36e-38 154
Msa1106220 AT5G65930.3 28.788 396 227 11 25 410 894 1244 1.60e-38 154
Msa1106220 AT5G06670.8 28.796 382 205 12 11 378 57 385 1.64e-38 152
Msa1106220 AT5G06670.4 28.796 382 205 12 11 378 57 385 1.64e-38 152
Msa1106220 AT5G06670.7 28.796 382 205 12 11 378 57 385 1.64e-38 152
Msa1106220 AT3G63480.2 30.256 390 213 10 23 391 1 352 1.74e-38 149
Msa1106220 AT5G06670.2 28.796 382 205 12 11 378 57 385 2.25e-38 153
Msa1106220 AT5G06670.3 28.796 382 205 12 11 378 57 385 2.25e-38 153
Msa1106220 AT1G21730.1 29.155 367 198 10 26 378 76 394 4.17e-38 152
Msa1106220 AT2G22610.1 30.100 402 227 14 26 418 418 774 7.58e-38 151
Msa1106220 AT2G22610.3 30.100 402 227 14 26 418 419 775 8.23e-38 151
Msa1106220 AT2G22610.2 30.100 402 227 14 26 418 418 774 8.51e-38 151
Msa1106220 AT4G21270.1 30.481 374 198 8 26 374 432 768 1.29e-37 150
Msa1106220 AT4G05190.2 32.021 381 183 12 26 374 416 752 3.20e-37 149
Msa1106220 AT4G05190.1 32.021 381 183 12 26 374 429 765 3.77e-37 149
Msa1106220 AT5G27950.1 32.609 368 190 12 26 378 80 404 6.04e-37 147
Msa1106220 AT3G16630.2 31.088 386 208 15 12 379 182 527 7.55e-37 147
Msa1106220 AT3G16630.1 31.088 386 208 15 12 379 182 527 7.55e-37 147
Msa1106220 AT3G12020.4 30.245 367 194 12 26 378 70 388 1.13e-36 147
Msa1106220 AT3G12020.1 30.245 367 194 12 26 378 70 388 1.13e-36 147
Msa1106220 AT3G63480.1 29.668 391 216 11 23 393 1 352 2.15e-36 143
Msa1106220 AT3G12020.3 30.245 367 194 12 26 378 70 388 2.72e-36 147
Msa1106220 AT3G12020.2 30.245 367 194 12 26 378 70 388 2.72e-36 147
Msa1106220 AT1G59540.1 30.000 370 204 12 23 380 1 327 3.85e-36 145
Msa1106220 AT5G06670.6 28.133 391 205 13 11 378 57 394 6.63e-36 145
Msa1106220 AT5G06670.1 28.133 391 205 13 11 378 57 394 6.63e-36 145
Msa1106220 AT4G39050.1 29.240 342 200 8 53 382 108 419 8.58e-36 145
Msa1106220 AT1G63640.2 30.959 365 188 13 26 374 473 789 1.27e-35 144
Msa1106220 AT1G55550.1 30.055 366 197 12 26 378 92 411 1.51e-35 144
Msa1106220 AT3G50240.3 32.174 345 153 11 121 415 4 317 3.01e-35 143
Msa1106220 AT1G63640.3 30.851 376 181 13 26 374 473 796 4.02e-35 143
Msa1106220 AT1G63640.5 30.645 372 187 13 26 374 463 786 4.20e-35 143
Msa1106220 AT1G63640.1 30.851 376 181 13 26 374 473 796 4.43e-35 143
Msa1106220 AT1G63640.4 30.851 376 181 13 26 374 473 796 4.43e-35 143
Msa1106220 AT1G01950.2 29.948 384 206 12 25 382 60 406 5.30e-35 142
Msa1106220 AT1G01950.3 29.948 384 206 12 25 382 60 406 5.38e-35 142
Msa1106220 AT1G01950.1 29.948 384 206 12 25 382 60 406 5.70e-35 142
Msa1106220 AT1G18410.3 34.737 285 145 8 103 374 557 813 5.93e-35 142
Msa1106220 AT1G18410.2 34.737 285 145 8 103 374 557 813 5.93e-35 142
Msa1106220 AT1G18410.5 35.461 282 139 8 103 374 547 795 6.56e-35 142
Msa1106220 AT5G41310.1 31.694 366 173 13 26 374 423 728 9.02e-35 142
Msa1106220 AT1G18410.1 35.461 282 139 8 103 374 700 948 1.08e-34 142
Msa1106220 AT1G18410.4 34.737 285 145 8 103 374 700 956 1.17e-34 142
Msa1106220 AT1G73860.1 30.303 363 201 11 26 374 510 834 2.24e-34 140
Msa1106220 AT3G43210.3 28.967 397 205 15 11 380 4 350 2.52e-34 140
Msa1106220 AT3G43210.5 28.967 397 205 15 11 380 4 350 2.52e-34 140
Msa1106220 AT3G43210.2 28.967 397 205 15 11 380 4 350 2.52e-34 140
Msa1106220 AT3G43210.4 28.967 397 205 15 11 380 4 350 2.52e-34 140
Msa1106220 AT3G43210.1 28.967 397 205 15 11 380 4 350 2.52e-34 140
Msa1106220 AT1G73860.2 30.303 363 201 11 26 374 427 751 3.37e-34 140
Msa1106220 AT2G21380.2 28.611 360 207 11 26 378 105 421 4.15e-34 140
Msa1106220 AT2G21380.1 28.611 360 207 11 26 378 105 421 4.15e-34 140
Msa1106220 AT3G51150.1 29.589 365 208 9 25 379 17 342 1.17e-33 138
Msa1106220 AT3G51150.2 29.589 365 208 9 25 379 17 342 1.22e-33 138
Msa1106220 AT3G51150.4 29.589 365 208 9 25 379 17 342 1.22e-33 138
Msa1106220 AT3G51150.3 29.589 365 208 9 25 379 17 342 1.22e-33 138
Msa1106220 AT3G19050.1 28.982 383 200 13 26 380 194 532 2.31e-33 138
Msa1106220 AT4G24170.1 30.541 370 194 12 25 379 6 327 2.61e-33 137
Msa1106220 AT4G24170.2 30.541 370 194 12 25 379 6 327 2.61e-33 137
Msa1106220 AT1G72250.2 29.730 370 199 12 26 378 501 826 4.33e-33 137
Msa1106220 AT1G72250.1 29.730 370 199 12 26 378 492 817 5.15e-33 136
Msa1106220 AT1G72250.4 29.730 370 199 12 26 378 512 837 5.59e-33 136
Msa1106220 AT1G72250.3 29.730 370 199 12 26 378 513 838 5.75e-33 136
Msa1106220 AT3G44730.2 30.504 377 181 13 26 374 423 746 1.04e-32 135
Msa1106220 AT3G44730.3 30.504 377 181 13 26 374 423 746 1.04e-32 135
Msa1106220 AT3G44730.1 30.997 371 187 13 26 374 378 701 1.08e-32 135
Msa1106220 AT3G44730.4 30.997 371 187 13 26 374 378 701 1.08e-32 135
Msa1106220 AT5G66310.2 29.589 365 208 8 25 379 18 343 1.36e-32 135
Msa1106220 AT5G66310.3 29.589 365 208 8 25 379 18 343 1.36e-32 135
Msa1106220 AT5G66310.1 29.589 365 208 8 25 379 18 343 1.36e-32 135
Msa1106220 AT3G10310.1 30.026 383 199 13 26 387 364 698 1.68e-32 135
Msa1106220 AT3G44050.1 29.288 379 204 11 26 380 94 432 1.74e-32 135
Msa1106220 AT3G10310.2 30.026 383 199 13 26 387 364 698 2.24e-32 134
Msa1106220 AT5G54670.3 30.649 385 179 14 26 374 337 669 6.67e-32 132
Msa1106220 AT5G54670.1 30.649 385 179 14 26 374 397 729 7.55e-32 132
Msa1106220 AT5G54670.2 30.649 385 179 14 26 374 397 729 7.55e-32 132
Msa1106220 AT3G10180.2 30.312 353 199 9 78 414 39 360 8.35e-32 133
Msa1106220 AT3G10180.1 30.312 353 199 9 78 414 39 360 8.94e-32 133
Msa1106220 AT2G47500.1 29.708 377 188 13 26 373 400 728 1.12e-31 132
Msa1106220 AT3G54870.2 28.219 365 205 10 43 383 115 446 1.22e-31 132
Msa1106220 AT2G47500.2 29.708 377 188 13 26 373 400 728 1.25e-31 132
Msa1106220 AT3G54870.1 28.297 364 204 10 43 382 115 445 1.31e-31 132
Msa1106220 AT3G54870.3 28.297 364 204 10 43 382 115 445 1.43e-31 132
Msa1106220 AT1G18370.1 29.688 384 213 10 10 380 16 355 1.53e-31 132
Msa1106220 AT4G14150.1 28.792 389 201 11 21 380 87 428 2.17e-31 131
Msa1106220 AT4G27180.1 29.144 374 199 9 26 374 388 720 2.29e-31 130
Msa1106220 AT4G27180.2 29.144 374 199 9 26 374 388 720 2.29e-31 130
Msa1106220 AT3G23670.2 27.763 389 205 9 21 380 92 433 1.02e-30 129
Msa1106220 AT3G23670.1 27.506 389 206 10 21 380 92 433 2.01e-30 129
Msa1106220 AT5G27000.1 28.532 361 208 11 26 374 395 717 2.10e-30 128
Msa1106220 AT1G09170.5 29.919 371 196 12 26 373 435 764 5.31e-30 127
Msa1106220 AT5G27550.2 29.268 369 200 13 26 378 133 456 6.08e-30 126
Msa1106220 AT5G27550.1 29.268 369 200 13 26 378 133 456 6.08e-30 126
Msa1106220 AT1G09170.4 29.919 371 196 12 26 373 435 764 9.26e-30 126
Msa1106220 AT1G09170.2 29.919 371 196 12 26 373 435 764 1.41e-29 125
Msa1106220 AT1G09170.3 29.919 371 196 12 26 373 435 764 1.68e-29 125
Msa1106220 AT1G09170.7 29.919 371 196 12 26 373 435 764 1.68e-29 125
Msa1106220 AT3G17360.1 28.010 407 225 11 1 380 142 507 2.79e-29 125
Msa1106220 AT3G17360.3 28.010 407 225 11 1 380 142 507 2.82e-29 125
Msa1106220 AT3G17360.2 28.010 407 225 11 1 380 142 507 3.07e-29 125
Msa1106220 AT2G21300.2 28.571 350 189 10 25 360 24 326 2.38e-28 121
Msa1106220 AT2G21300.4 28.571 350 189 10 25 360 24 326 2.38e-28 121
Msa1106220 AT2G21300.3 28.571 350 189 10 25 360 24 326 2.38e-28 121
Msa1106220 AT2G21300.1 28.571 350 189 10 25 360 24 326 2.38e-28 121
Msa1106220 AT2G21300.5 28.571 350 189 10 25 360 24 326 2.38e-28 121
Msa1106220 AT1G01950.4 30.796 289 154 8 116 382 1 265 4.12e-27 117
Msa1106220 AT4G38950.3 26.801 347 199 8 25 360 13 315 2.01e-26 115
Msa1106220 AT4G38950.5 26.801 347 199 8 25 360 13 315 2.01e-26 115
Msa1106220 AT4G38950.4 26.801 347 199 8 25 360 13 315 2.01e-26 115
Msa1106220 AT4G38950.1 26.801 347 199 8 25 360 13 315 2.01e-26 115
Msa1106220 AT4G38950.2 26.801 347 199 8 25 360 13 315 2.01e-26 115
Msa1106220 AT1G09170.1 29.041 365 171 11 26 373 435 728 4.58e-26 114
Msa1106220 AT1G09170.6 29.730 333 181 10 26 346 435 726 6.10e-26 114
Msa1106220 AT1G09170.8 29.730 333 181 10 26 346 435 726 6.10e-26 114
Msa1106220 AT5G27950.2 32.075 265 138 6 129 378 1 238 8.39e-25 108
Msa1106220 AT1G59540.2 28.626 262 150 6 129 380 1 235 2.82e-23 105
Msa1106220 AT5G65460.2 25.749 501 280 20 26 493 139 580 9.19e-22 101
Msa1106220 AT5G65460.1 25.749 501 280 20 26 493 139 580 1.00e-21 101
Msa1106220 AT5G65460.4 25.749 501 280 20 26 493 139 580 1.11e-21 101
Msa1106220 AT5G65460.6 25.749 501 280 20 26 493 139 580 1.14e-21 100
Msa1106220 AT5G42490.1 28.846 312 161 11 25 323 9 272 1.81e-21 100
Msa1106220 AT5G42490.2 28.846 312 161 11 25 323 9 272 1.82e-21 100
Msa1106220 AT4G14330.1 25.938 320 176 9 79 378 89 367 1.95e-21 100
Msa1106220 AT5G65460.3 25.394 508 280 21 26 493 139 587 1.60e-19 94.4
Msa1106220 AT5G10470.2 24.934 381 226 12 26 397 143 472 3.15e-18 90.1
Msa1106220 AT5G10470.1 24.934 381 226 12 26 397 143 472 3.35e-18 90.1
Msa1106220 AT3G51150.5 32.812 192 95 4 195 379 25 189 9.39e-18 88.2
Msa1106220 AT3G20150.2 23.754 341 197 11 72 380 129 438 6.64e-17 85.5
Msa1106220 AT3G20150.1 23.754 341 197 11 72 380 129 438 7.59e-17 85.5
Msa1106220 AT1G20060.7 26.176 340 187 11 46 361 130 429 1.06e-14 78.6
Msa1106220 AT1G20060.10 26.176 340 187 11 46 361 130 429 1.17e-14 78.2
Msa1106220 AT1G20060.9 26.176 340 187 11 46 361 130 429 1.18e-14 78.2
Msa1106220 AT1G20060.5 26.176 340 187 11 46 361 130 429 1.19e-14 78.2
Msa1106220 AT1G20060.6 26.176 340 187 11 46 361 130 429 1.25e-14 78.2
Msa1106220 AT1G20060.2 26.176 340 187 11 46 361 130 429 1.32e-14 78.2
Msa1106220 AT1G20060.3 26.176 340 187 11 46 361 130 429 1.39e-14 78.2
Msa1106220 AT1G20060.8 26.176 340 187 11 46 361 130 429 1.41e-14 78.2
Msa1106220 AT1G20060.4 26.176 340 187 11 46 361 130 429 1.47e-14 78.2
Msa1106220 AT5G65460.5 26.870 361 194 15 159 493 18 334 6.34e-11 66.2
Msa1106220 AT1G20060.1 26.582 158 102 3 74 222 157 309 8.40e-11 65.9

Find 169 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAACTGCTACATCATTT+TGG 0.137036 7_3:+45482309 None:intergenic
CTCCACTAAGAAAGGGTTTC+AGG 0.192536 7_3:-45478785 Msa1106220:CDS
CTGTCCCTATAGGGTGTTCT+TGG 0.234705 7_3:+45480497 None:intergenic
AATTCGGACATTGTATTTAC+AGG 0.240436 7_3:+45480884 None:intergenic
AGCAAGTGAGATTTCAGTTT+TGG 0.243100 7_3:-45480951 Msa1106220:CDS
GCTGGTACATCTTTGCTTAA+TGG 0.245212 7_3:+45478916 None:intergenic
TGATTCCAGTGGTGCCTTAT+TGG 0.250316 7_3:+45479274 None:intergenic
CCAAGGTAAGGGTCATTGTT+AGG 0.268466 7_3:-45482418 Msa1106220:CDS
AGAGGAGCTACTAGAGTTAA+AGG 0.271561 7_3:-45478483 Msa1106220:intron
GTGTAACTTTCTTAGTCTTT+TGG 0.286241 7_3:-45477658 Msa1106220:three_prime_UTR
CTAGAGAGTCCTGCAATATA+CGG 0.293700 7_3:+45480465 None:intergenic
TTCTAGCCAAGCTTTCAATT+TGG 0.299864 7_3:+45479871 None:intergenic
ATCTGTTCATACTGTTAGTT+TGG 0.307923 7_3:-45479975 Msa1106220:CDS
CAGGTTACCGTCCACTCAAT+TGG 0.310031 7_3:-45480697 Msa1106220:CDS
AAGAAAGGGTTTCAGGAAAA+TGG 0.319274 7_3:-45478778 Msa1106220:CDS
TGCCCTCATGGTTGCCTGCC+TGG 0.327794 7_3:-45480429 Msa1106220:intron
AAAAGTGAGATACAAGAAAC+TGG 0.328169 7_3:+45482350 None:intergenic
CCTTACCTTGGAAACTGAAA+TGG 0.336754 7_3:+45482430 None:intergenic
AATGCTACTGTGTTTGCTTA+TGG 0.345908 7_3:-45482055 Msa1106220:CDS
GACTGAGCATGAGGCCAATA+AGG 0.351376 7_3:-45479288 Msa1106220:CDS
TTCCTGAAACCCTTTCTTAG+TGG 0.355395 7_3:+45478783 None:intergenic
GTCAATTTGCTGTCCCTATA+GGG 0.356552 7_3:+45480488 None:intergenic
GTGGAGCAGGTTGCAGAAAA+AGG 0.356653 7_3:+45478802 None:intergenic
TGCAAGAAGTTCTGCTTTGA+AGG 0.362396 7_3:-45478734 Msa1106220:intron
TCAGAATCCAGGAGAATATC+AGG 0.366885 7_3:-45479999 Msa1106220:intron
GTCCACTCAATTGGGGTAAT+GGG 0.368280 7_3:-45480688 Msa1106220:CDS
ATAGTCCCCTGAGGTGAATA+TGG 0.371640 7_3:+45480915 None:intergenic
CGTCCACTCAATTGGGGTAA+TGG 0.371974 7_3:-45480689 Msa1106220:CDS
TGAAATGGGGTTGTTGTTGA+TGG 0.374488 7_3:+45482445 None:intergenic
GGTCAATTTGCTGTCCCTAT+AGG 0.380127 7_3:+45480487 None:intergenic
CATTATGTCCTTCCGTTGCT+TGG 0.383909 7_3:+45480654 None:intergenic
CAAACCAAGAACACCCTATA+GGG 0.384546 7_3:-45480501 Msa1106220:CDS
AGCAGAGCTAATGGTGGAAC+CGG 0.386413 7_3:+45479778 None:intergenic
TACTGTGTAAGCAGGGCCTT+TGG 0.386750 7_3:-45479596 Msa1106220:intron
CTTACCTTGGAAACTGAAAT+GGG 0.387259 7_3:+45482431 None:intergenic
TCAGGGCATAGGAGACAAAA+TGG 0.393383 7_3:-45478049 Msa1106220:intron
AGGTTACCGTCCACTCAATT+GGG 0.394689 7_3:-45480696 Msa1106220:CDS
CCATTTCAGTTTCCAAGGTA+AGG 0.394848 7_3:-45482430 Msa1106220:CDS
TCCATGTCAACGTTACCTTT+TGG 0.410793 7_3:+45479896 None:intergenic
AGAAGAAAGTCCACTAAAAT+CGG 0.413708 7_3:-45478004 Msa1106220:intron
ACAAACCAAGAACACCCTAT+AGG 0.421273 7_3:-45480502 Msa1106220:CDS
TTGAATACCATTGATGTTGA+TGG 0.423673 7_3:+45478858 None:intergenic
CAAGGTAAGGGTCATTGTTA+GGG 0.424627 7_3:-45482417 Msa1106220:CDS
TTGAGGAGTGAGAGTGGGAG+AGG 0.426770 7_3:+45482575 None:intergenic
GCTTATGGTGCTACTGGTAG+TGG 0.426928 7_3:-45482040 Msa1106220:CDS
TTGAAATTGAGGAGTGAGAG+TGG 0.427528 7_3:+45482569 None:intergenic
AAAGTAGTGACCGTTTGTTT+TGG 0.432476 7_3:+45482604 None:intergenic
AAACCCTTTCTTAGTGGAGC+AGG 0.438676 7_3:+45478789 None:intergenic
GGAGAAGACCTCTTGAAATT+CGG 0.440719 7_3:+45480868 None:intergenic
GAAATGGGGTTGTTGTTGAT+GGG 0.441229 7_3:+45482446 None:intergenic
GTGTTTGCTTATGGTGCTAC+TGG 0.443703 7_3:-45482046 Msa1106220:CDS
CAAATTGACCCGTATATTGC+AGG 0.450340 7_3:-45480474 Msa1106220:CDS
CGTATATTGCAGGACTCTCT+AGG 0.452947 7_3:-45480464 Msa1106220:CDS
GCTATGTAGAACATGCATTC+TGG 0.454134 7_3:-45479335 Msa1106220:intron
CCTCACGAAACCACAAGAAA+TGG 0.454531 7_3:-45482380 Msa1106220:CDS
TATGTGTGATTTCAGAATCC+AGG 0.457622 7_3:-45480010 Msa1106220:intron
TGATCTCCTAGCAGAGCTAA+TGG 0.462039 7_3:+45479769 None:intergenic
GCAACCTGCTCCACTAAGAA+AGG 0.467614 7_3:-45478793 Msa1106220:CDS
AATGGGGTTGTTGTTGATGG+GGG 0.469219 7_3:+45482448 None:intergenic
AATAGAAGGAGCTGCAATGA+AGG 0.472976 7_3:-45480602 Msa1106220:CDS
TGGAAGCCAAATTGAAAGCT+TGG 0.473460 7_3:-45479877 Msa1106220:CDS
AAATGGGGTTGTTGTTGATG+GGG 0.475568 7_3:+45482447 None:intergenic
TGTGGTTTCGTGAGGAAGGA+AGG 0.477652 7_3:+45482388 None:intergenic
AACTTATAGCTTTACCAGGC+AGG 0.481857 7_3:+45480415 None:intergenic
ACAGATTCCTGATATTCTCC+TGG 0.485357 7_3:+45479992 None:intergenic
TCAAATCTTTCTCACATCAA+TGG 0.485581 7_3:-45482507 Msa1106220:exon
CCTAACAATGACCCTTACCT+TGG 0.487517 7_3:+45482418 None:intergenic
TTAGTTTGGCTGCTCGATCA+AGG 0.490952 7_3:-45479961 Msa1106220:CDS
CTCTCTCCCATCAACATCAA+TGG 0.494198 7_3:-45478865 Msa1106220:CDS
GGGATCTAGTCGTGCCCTCA+TGG 0.500153 7_3:-45480441 Msa1106220:CDS
CAGGTAATGAAGACAATAGA+AGG 0.502947 7_3:-45480616 Msa1106220:CDS
ATTGTATTCCTTCAGGGCAT+AGG 0.503428 7_3:-45478060 Msa1106220:intron
GAAGATTGATGTTGAAATTG+AGG 0.506684 7_3:+45482558 None:intergenic
TTAAGTGACCTGGAGAAGAT+TGG 0.506704 7_3:-45477892 Msa1106220:CDS
AAGATGGCCATATTCACCTC+AGG 0.507995 7_3:-45480922 Msa1106220:CDS
TACTTTCAATAGCTCAGTGA+AGG 0.508772 7_3:-45479744 Msa1106220:CDS
AATGGACTTTGTAGTACTGC+TGG 0.509124 7_3:+45478898 None:intergenic
GATTGGTCTCTCTTTGAAGC+AGG 0.509502 7_3:-45477875 Msa1106220:intron
CACATTTGACAGTGCAAACA+AGG 0.511891 7_3:+45480544 None:intergenic
CAGGGAACTGAAGAACAACC+TGG 0.514866 7_3:-45481091 Msa1106220:CDS
CATTTCAGTTTCCAAGGTAA+GGG 0.516317 7_3:-45482429 Msa1106220:CDS
AAGCACTCCATGACTCCTGC+TGG 0.523110 7_3:+45480796 None:intergenic
AATGCGTTTAAAGTTGATGC+AGG 0.524374 7_3:-45480635 Msa1106220:CDS
GTCTCTAGTTTATGAGCTGA+AGG 0.524968 7_3:+45479920 None:intergenic
CAACCCCATTTCAGTTTCCA+AGG 0.526451 7_3:-45482435 Msa1106220:CDS
GTATATTGCAGGACTCTCTA+GGG 0.527165 7_3:-45480463 Msa1106220:CDS
TTTGCGCCTCTGAATACCAC+TGG 0.531310 7_3:+45480847 None:intergenic
ATTTGTTAAATAATGCAAGC+AGG 0.533405 7_3:-45478603 Msa1106220:intron
TTCATACTATGAGGTCTACA+TGG 0.535101 7_3:-45481002 Msa1106220:CDS
TGAGGCCAATAAGGCACCAC+TGG 0.535226 7_3:-45479279 Msa1106220:CDS
ATCTCAAAGACCCATTTACC+AGG 0.535678 7_3:-45482289 Msa1106220:intron
TGAATACCATTGATGTTGAT+GGG 0.537076 7_3:+45478859 None:intergenic
ATTGCCAACGGCATCAAGCC+AGG 0.538567 7_3:+45481073 None:intergenic
TCAGGAAAATGGCACTCCAC+TGG 0.539018 7_3:-45478767 Msa1106220:CDS
TTCTTGTGGTTTCGTGAGGA+AGG 0.539019 7_3:+45482384 None:intergenic
AAAATCCAAACCAAAACAAA+CGG 0.539461 7_3:-45482614 Msa1106220:five_prime_UTR
TACTATCGACTCCTCCTGAT+GGG 0.542716 7_3:-45480763 Msa1106220:CDS
TTGACAAATAGACAGGATAG+TGG 0.543005 7_3:+45481048 None:intergenic
AGAAGTTAGTCTGATGATAC+CGG 0.544298 7_3:-45482095 Msa1106220:CDS
ACAAGACTTCCATTCCCATC+AGG 0.544458 7_3:+45480749 None:intergenic
CCATTTCTTGTGGTTTCGTG+AGG 0.545721 7_3:+45482380 None:intergenic
GGATTCGTTCTTTGATCAAG+AGG 0.546912 7_3:-45482146 Msa1106220:CDS
GACGTATCCAGCAGGAGTCA+TGG 0.547288 7_3:-45480803 Msa1106220:CDS
CTGAACCTCATAGACTTGGC+AGG 0.548095 7_3:-45480716 Msa1106220:CDS
CATAAACTAGAGACACCAAA+AGG 0.549478 7_3:-45479911 Msa1106220:CDS
TAGAGAGTCCTGCAATATAC+GGG 0.552724 7_3:+45480466 None:intergenic
CATGTTGCAGTTAAGTGACC+TGG 0.553001 7_3:-45477902 Msa1106220:intron
AAGAGAGACCAATCTTCTCC+AGG 0.553591 7_3:+45477884 None:intergenic
TTAGTGGACTTTCTTCTCTG+AGG 0.555574 7_3:+45478010 None:intergenic
TCGGAACGAGTGTTACAAGT+TGG 0.557175 7_3:-45482167 Msa1106220:CDS
TCGACTCCTCCTGATGGGAA+TGG 0.557805 7_3:-45480758 Msa1106220:CDS
TGGAAAGACATATACTATGC+AGG 0.559413 7_3:-45482020 Msa1106220:intron
AGACAGGTTGATGAGAATTG+TGG 0.559536 7_3:+45482536 None:intergenic
TCAAAGACATAGTCTGAAGA+TGG 0.559622 7_3:+45478833 None:intergenic
CAACCTGCTCCACTAAGAAA+GGG 0.561860 7_3:-45478792 Msa1106220:CDS
AAGAGCTCACAACAAAGACT+TGG 0.567277 7_3:-45479833 Msa1106220:CDS
GCCTCAATGACGTATCCAGC+AGG 0.568523 7_3:-45480811 Msa1106220:CDS
GTACTATCGACTCCTCCTGA+TGG 0.574583 7_3:-45480764 Msa1106220:CDS
AGCTCAAATTTCATACTATG+AGG 0.579166 7_3:-45481011 Msa1106220:CDS
GGTAACCTGCCAAGTCTATG+AGG 0.585231 7_3:+45480711 None:intergenic
GTGGTTTCGTGAGGAAGGAA+GGG 0.589527 7_3:+45482389 None:intergenic
TACAATGTCCGAATTTCAAG+AGG 0.592483 7_3:-45480876 Msa1106220:CDS
TGGGTCATCGCCATTTCTTG+TGG 0.594972 7_3:+45482370 None:intergenic
GATGTATTCCAAGCAACGGA+AGG 0.596808 7_3:-45480662 Msa1106220:CDS
TTTCAAGAGGTCTTCTCCAG+TGG 0.601275 7_3:-45480863 Msa1106220:CDS
CTTGCACTGAATTTGTCCAG+TGG 0.602500 7_3:+45478751 None:intergenic
GCAGAGCTAATGGTGGAACC+GGG 0.605202 7_3:+45479779 None:intergenic
GGGAATGGAAGTCTTGTATG+TGG 0.605834 7_3:-45480743 Msa1106220:CDS
ACAACCTGGCTTGATGCCGT+TGG 0.606768 7_3:-45481077 Msa1106220:CDS
GAATCATATAATGATGTACC+TGG 0.610099 7_3:-45479257 Msa1106220:intron
CTGTCTATTTGTCAAAACAC+TGG 0.610198 7_3:-45481040 Msa1106220:CDS
TTACATCCACCGAAAATAGC+CGG 0.611157 7_3:+45482076 None:intergenic
ACCAAAAGGTAACGTTGACA+TGG 0.612646 7_3:-45479897 Msa1106220:CDS
ACTTTCAATAGCTCAGTGAA+GGG 0.614829 7_3:-45479743 Msa1106220:CDS
ATAGAAGGAGCTGCAATGAA+GGG 0.615772 7_3:-45480601 Msa1106220:CDS
GATCAAGAGGATAACAATGT+GGG 0.616118 7_3:-45482133 Msa1106220:CDS
AGGCGCAAAACTGCACACAC+AGG 0.616518 7_3:-45480833 Msa1106220:CDS
AAAACTGAACCTCATAGACT+TGG 0.619189 7_3:-45480720 Msa1106220:CDS
CATTACCCCAATTGAGTGGA+CGG 0.622510 7_3:+45480690 None:intergenic
AACCCATTACCCCAATTGAG+TGG 0.622973 7_3:+45480686 None:intergenic
GTTTGATGTATTCCAAGCAA+CGG 0.624754 7_3:-45480666 Msa1106220:CDS
TGAAATTGAGGAGTGAGAGT+GGG 0.625065 7_3:+45482570 None:intergenic
ACTCTTTGATGACAAAGCAG+AGG 0.629293 7_3:-45477721 Msa1106220:CDS
TAAGAGAGAGACTGAGCATG+AGG 0.631727 7_3:-45479297 Msa1106220:CDS
AGATGGCCATATTCACCTCA+GGG 0.636559 7_3:-45480921 Msa1106220:CDS
GGTTACCGTCCACTCAATTG+GGG 0.640265 7_3:-45480695 Msa1106220:CDS
TCTTCTCCAGTGGTATTCAG+AGG 0.640669 7_3:-45480853 Msa1106220:CDS
GTTCCACCATTAGCTCTGCT+AGG 0.640753 7_3:-45479775 Msa1106220:CDS
TACCAGGCAGGCAACCATGA+GGG 0.641534 7_3:+45480427 None:intergenic
GAACATGCATTCTGGTGTTG+AGG 0.643262 7_3:-45479327 Msa1106220:CDS
ACTCTAAGAGGTCGTAACAT+CGG 0.645191 7_3:+45480978 None:intergenic
TGATCAAGAGGATAACAATG+TGG 0.647876 7_3:-45482134 Msa1106220:CDS
AAAGCTTGGCTAGAATCAAG+AGG 0.648838 7_3:-45479863 Msa1106220:CDS
AAAGTGAGATACAAGAAACT+GGG 0.651165 7_3:+45482351 None:intergenic
TTCAATAGCTCAGTGAAGGG+TGG 0.656508 7_3:-45479740 Msa1106220:CDS
AGACTTCCATTCCCATCAGG+AGG 0.657956 7_3:+45480752 None:intergenic
TCCTGCTGGATACGTCATTG+AGG 0.658697 7_3:+45480810 None:intergenic
TTCAGACTATGTCTTTGACA+CGG 0.659344 7_3:-45478828 Msa1106220:CDS
AGGATAGTGGACATTGCCAA+CGG 0.676034 7_3:+45481061 None:intergenic
TTACCTTGGAAACTGAAATG+GGG 0.684729 7_3:+45482432 None:intergenic
TCTCCTAGCAGAGCTAATGG+TGG 0.684954 7_3:+45479772 None:intergenic
TATATTGCAGGACTCTCTAG+GGG 0.686018 7_3:-45480462 Msa1106220:CDS
TTACCAGGCAGGCAACCATG+AGG 0.691053 7_3:+45480426 None:intergenic
AAGCTCAACATACTACTGAG+AGG 0.692590 7_3:-45479697 Msa1106220:intron
ATTTCTAAAAGAGACACCAA+AGG 0.694450 7_3:+45479580 None:intergenic
ACATCATTATATGATTCCAG+TGG 0.698043 7_3:+45479263 None:intergenic
GATGGCCATATTCACCTCAG+GGG 0.723977 7_3:-45480920 Msa1106220:CDS
ATATTGCAGGACTCTCTAGG+GGG 0.730181 7_3:-45480461 Msa1106220:CDS
GAACTTGAGATAGTCCCCTG+AGG 0.791662 7_3:+45480906 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTGAATTTTTAGTATT+TGG - chr7_3:45478320-45478339 Msa1106220:intron 10.0%
!! ATATACTCTGATTATTTAAA+AGG - chr7_3:45479978-45479997 Msa1106220:CDS 15.0%
!! TTCGATATTATAATGAAAAA+TGG - chr7_3:45480910-45480929 Msa1106220:CDS 15.0%
!! TTAAAAATTAAACAGTGTTA+AGG + chr7_3:45481597-45481616 None:intergenic 15.0%
!!! AATTGAATTTTTTTGAAACC+TGG + chr7_3:45477838-45477857 None:intergenic 20.0%
!!! CAATTTTGTTTGTATGTTTA+TGG - chr7_3:45478159-45478178 Msa1106220:intron 20.0%
!!! TTATTTTCAATCCTCATTTT+TGG + chr7_3:45478873-45478892 None:intergenic 20.0%
!! AAACTGCTAAAAAATTAAAC+AGG + chr7_3:45478948-45478967 None:intergenic 20.0%
!!! TTTTTCCTCTCATTTAATAT+TGG - chr7_3:45479722-45479741 Msa1106220:CDS 20.0%
!!! TCTTTTAGAAATTTACTAGA+TGG - chr7_3:45480537-45480556 Msa1106220:CDS 20.0%
!!! TTTTAACTTCACTAACAAAA+TGG - chr7_3:45481407-45481426 Msa1106220:intron 20.0%
!! AAAAATAGATTATGTGAGAA+AGG + chr7_3:45481446-45481465 None:intergenic 20.0%
!! AGAAATTATGCAAAATACAA+TGG + chr7_3:45481542-45481561 None:intergenic 20.0%
!!! TTTAATTTTTAAATGCAGAG+AGG - chr7_3:45481605-45481624 Msa1106220:intron 20.0%
!!! TTTCTTCATTTTCTAATACT+TGG - chr7_3:45482014-45482033 Msa1106220:intron 20.0%
!!! TTCTTCATTTTCTAATACTT+GGG - chr7_3:45482015-45482034 Msa1106220:intron 20.0%
!!! TTTTACTTGCATTAACAAAA+AGG - chr7_3:45482597-45482616 Msa1106220:five_prime_UTR 20.0%
! AAAATCCAAACCAAAACAAA+CGG - chr7_3:45477492-45477511 Msa1106220:three_prime_UTR 25.0%
!!! AAAGATTTGATTTTTGAGAC+AGG + chr7_3:45477589-45477608 None:intergenic 25.0%
!! ATAAACTGCTACATCATTTT+GGG + chr7_3:45477799-45477818 None:intergenic 25.0%
!!! TTTTTTGAAACCTGGTAAAT+GGG + chr7_3:45477830-45477849 None:intergenic 25.0%
!!! TTTTTTTGAAACCTGGTAAA+TGG + chr7_3:45477831-45477850 None:intergenic 25.0%
!!! TTAGTAGAGTGTTTGAATTT+TGG - chr7_3:45477883-45477902 Msa1106220:CDS 25.0%
! AACAATTATGTGATTATGTG+AGG - chr7_3:45478264-45478283 Msa1106220:intron 25.0%
! ACAATTATGTGATTATGTGA+GGG - chr7_3:45478265-45478284 Msa1106220:intron 25.0%
! TCAATAAATCTACCAAAAGT+GGG + chr7_3:45478308-45478327 None:intergenic 25.0%
! TTCAATAAATCTACCAAAAG+TGG + chr7_3:45478309-45478328 None:intergenic 25.0%
!! TGGTTATACTTTTCTGAATA+TGG - chr7_3:45478418-45478437 Msa1106220:intron 25.0%
!! CTTTTCTGAATATGGTAAAA+CGG - chr7_3:45478426-45478445 Msa1106220:intron 25.0%
! ATACATTATTGCACTAGATA+AGG + chr7_3:45478514-45478533 None:intergenic 25.0%
! TTATCTAGTGCAATAATGTA+TGG - chr7_3:45478513-45478532 Msa1106220:intron 25.0%
!! ATTGCAATGATTTTATCTCA+AGG - chr7_3:45478692-45478711 Msa1106220:intron 25.0%
! CAATATCAAGAATTCAAAAG+TGG + chr7_3:45478901-45478920 None:intergenic 25.0%
!! CACTTTTGAATTCTTGATAT+TGG - chr7_3:45478899-45478918 Msa1106220:CDS 25.0%
!! ATAAAACTTATAGCTTTACC+AGG + chr7_3:45479698-45479717 None:intergenic 25.0%
! ATGAACCAATATTAAATGAG+AGG + chr7_3:45479730-45479749 None:intergenic 25.0%
!!! CTCATTTAATATTGGTTCAT+TGG - chr7_3:45479730-45479749 Msa1106220:CDS 25.0%
! ACACTAATCAGAATTAATAG+GGG + chr7_3:45479860-45479879 None:intergenic 25.0%
! GACACTAATCAGAATTAATA+GGG + chr7_3:45479861-45479880 None:intergenic 25.0%
! GGATAGAATAACAAATATCT+AGG - chr7_3:45479937-45479956 Msa1106220:CDS 25.0%
! ATCAGAGTATATATTAGATC+TGG + chr7_3:45479970-45479989 None:intergenic 25.0%
!!! ATTCTGAAATCACACATAAA+GGG + chr7_3:45480094-45480113 None:intergenic 25.0%
!!! TGCTTTTGATTCTTGTAAAA+AGG - chr7_3:45480566-45480585 Msa1106220:CDS 25.0%
! ACAGTTGGATAAATACTAAA+CGG - chr7_3:45480981-45481000 Msa1106220:CDS 25.0%
!! CACATACATTGATTAATACT+TGG - chr7_3:45481106-45481125 Msa1106220:intron 25.0%
! TTAGTGAAGTTAAAACAACT+AGG + chr7_3:45481402-45481421 None:intergenic 25.0%
!! ATTTGTTAAATAATGCAAGC+AGG - chr7_3:45481503-45481522 Msa1106220:intron 25.0%
!! AGCTTTTGCTAAAATTAAAG+TGG + chr7_3:45481853-45481872 None:intergenic 25.0%
! AAAATAATGTGATGCATGTT+TGG + chr7_3:45481926-45481945 None:intergenic 25.0%
GAAGATTGATGTTGAAATTG+AGG + chr7_3:45477551-45477570 None:intergenic 30.0%
TCAAATCTTTCTCACATCAA+TGG - chr7_3:45477599-45477618 Msa1106220:three_prime_UTR 30.0%
AAAGTGAGATACAAGAAACT+GGG + chr7_3:45477758-45477777 None:intergenic 30.0%
AAAAGTGAGATACAAGAAAC+TGG + chr7_3:45477759-45477778 None:intergenic 30.0%
! GATAAACTGCTACATCATTT+TGG + chr7_3:45477800-45477819 None:intergenic 30.0%
!! TCGTTGTTTGATTTTTCAGT+CGG - chr7_3:45477920-45477939 Msa1106220:intron 30.0%
! AAATGTAAGTTTGAGTTCAG+AGG - chr7_3:45478347-45478366 Msa1106220:intron 30.0%
! AATGTAAGTTTGAGTTCAGA+GGG - chr7_3:45478348-45478367 Msa1106220:intron 30.0%
TTCATGTTTAACCATGACAT+AGG - chr7_3:45478392-45478411 Msa1106220:intron 30.0%
TTTAACCATGACATAGGTTA+TGG - chr7_3:45478398-45478417 Msa1106220:intron 30.0%
TATAACCATAACCTATGTCA+TGG + chr7_3:45478406-45478425 None:intergenic 30.0%
ATTAGAGTTTGTACAACCTA+TGG + chr7_3:45478583-45478602 None:intergenic 30.0%
ATAGGTTGTACAAACTCTAA+TGG - chr7_3:45478582-45478601 Msa1106220:intron 30.0%
AACTCTAATGGTATTAATGC+CGG - chr7_3:45478594-45478613 Msa1106220:intron 30.0%
TGAACCCTAATCGTATATTA+GGG - chr7_3:45478757-45478776 Msa1106220:CDS 30.0%
ACATCCCTAATATACGATTA+GGG + chr7_3:45478764-45478783 None:intergenic 30.0%
TACATCCCTAATATACGATT+AGG + chr7_3:45478765-45478784 None:intergenic 30.0%
TAGAAGTGAGAAAAACTCTA+GGG + chr7_3:45478820-45478839 None:intergenic 30.0%
TTCCTATACTACCAAAAATG+AGG - chr7_3:45478859-45478878 Msa1106220:CDS 30.0%
!!! ATCCTCATTTTTGGTAGTAT+AGG + chr7_3:45478864-45478883 None:intergenic 30.0%
TAGTTGAAATAAACGATGCT+TGG - chr7_3:45478987-45479006 Msa1106220:intron 30.0%
AGCTCAAATTTCATACTATG+AGG - chr7_3:45479095-45479114 Msa1106220:intron 30.0%
AATTCGGACATTGTATTTAC+AGG + chr7_3:45479225-45479244 None:intergenic 30.0%
AATTCTCTTGGTCATTCTAA+TGG + chr7_3:45479821-45479840 None:intergenic 30.0%
CGACACTAATCAGAATTAAT+AGG + chr7_3:45479862-45479881 None:intergenic 30.0%
ACTAGTAATGACATGAGTAA+TGG + chr7_3:45480027-45480046 None:intergenic 30.0%
!! GATTCTGAAATCACACATAA+AGG + chr7_3:45480095-45480114 None:intergenic 30.0%
ATCTGTTCATACTGTTAGTT+TGG - chr7_3:45480131-45480150 Msa1106220:intron 30.0%
! ATTTCTAAAAGAGACACCAA+AGG + chr7_3:45480529-45480548 None:intergenic 30.0%
ACATCATTATATGATTCCAG+TGG + chr7_3:45480846-45480865 None:intergenic 30.0%
GAATCATATAATGATGTACC+TGG - chr7_3:45480849-45480868 Msa1106220:CDS 30.0%
TAGTATTTATCCAACTGTTC+TGG + chr7_3:45480979-45480998 None:intergenic 30.0%
TGAATACCATTGATGTTGAT+GGG + chr7_3:45481250-45481269 None:intergenic 30.0%
TTGAATACCATTGATGTTGA+TGG + chr7_3:45481251-45481270 None:intergenic 30.0%
GATAAAGAGACTATTCAAAC+TGG + chr7_3:45481679-45481698 None:intergenic 30.0%
TCATTATTGCACTGTTCTTT+AGG - chr7_3:45481709-45481728 Msa1106220:intron 30.0%
CATTATTGCACTGTTCTTTA+GGG - chr7_3:45481710-45481729 Msa1106220:intron 30.0%
AATGATTTCTCAGACCAAAA+TGG + chr7_3:45481737-45481756 None:intergenic 30.0%
TTCAATCATTGTATTCCTTC+AGG - chr7_3:45482039-45482058 Msa1106220:CDS 30.0%
TCAATCATTGTATTCCTTCA+GGG - chr7_3:45482040-45482059 Msa1106220:CDS 30.0%
AGAAGAAAGTCCACTAAAAT+CGG - chr7_3:45482102-45482121 Msa1106220:CDS 30.0%
!! TCTATACTAACCGATTTTAG+TGG + chr7_3:45482115-45482134 None:intergenic 30.0%
!! CTTTTGCTGATGCATTTTTT+TGG - chr7_3:45482181-45482200 Msa1106220:intron 30.0%
! TCTAACTTGTACTACTTGTT+TGG - chr7_3:45482327-45482346 Msa1106220:CDS 30.0%
!! TTTTTGCAGCTTTAGTAAAC+AGG + chr7_3:45482364-45482383 None:intergenic 30.0%
!! GTGTAACTTTCTTAGTCTTT+TGG - chr7_3:45482448-45482467 Msa1106220:CDS 30.0%
! GGTGTGATTCTTTTAATGTA+TGG - chr7_3:45482618-45482637 Msa1106220:five_prime_UTR 30.0%
!! TTTGGATTTTGACGCACTTT+TGG + chr7_3:45477482-45477501 None:intergenic 35.0%
! AAAGTAGTGACCGTTTGTTT+TGG + chr7_3:45477505-45477524 None:intergenic 35.0%
TTACCTTGGAAACTGAAATG+GGG + chr7_3:45477677-45477696 None:intergenic 35.0%
CTTACCTTGGAAACTGAAAT+GGG + chr7_3:45477678-45477697 None:intergenic 35.0%
CATTTCAGTTTCCAAGGTAA+GGG - chr7_3:45477677-45477696 Msa1106220:three_prime_UTR 35.0%
TGATCAAGAGGATAACAATG+TGG - chr7_3:45477972-45477991 Msa1106220:intron 35.0%
GATCAAGAGGATAACAATGT+GGG - chr7_3:45477973-45477992 Msa1106220:intron 35.0%
! AGAAGTTAGTCTGATGATAC+CGG - chr7_3:45478011-45478030 Msa1106220:CDS 35.0%
AATGCTACTGTGTTTGCTTA+TGG - chr7_3:45478051-45478070 Msa1106220:intron 35.0%
TGGAAAGACATATACTATGC+AGG - chr7_3:45478086-45478105 Msa1106220:intron 35.0%
TGTATGTTTATGGCATATGC+AGG - chr7_3:45478169-45478188 Msa1106220:intron 35.0%
GCAATAATGTATGGATCCTT+TGG - chr7_3:45478522-45478541 Msa1106220:intron 35.0%
!!! GAGAGCATTTCTAGCAATTT+TGG - chr7_3:45478628-45478647 Msa1106220:CDS 35.0%
!!! AGCATTTCTAGCAATTTTGG+TGG - chr7_3:45478631-45478650 Msa1106220:CDS 35.0%
!! TTTCTAGCAATTTTGGTGGA+AGG - chr7_3:45478635-45478654 Msa1106220:intron 35.0%
! ATGATTTTATCTCAAGGTGC+TGG - chr7_3:45478698-45478717 Msa1106220:intron 35.0%
! GCTTCATAAGATGTAGCTTT+TGG - chr7_3:45478725-45478744 Msa1106220:intron 35.0%
!!! AAGATGTAGCTTTTGGAGTT+TGG - chr7_3:45478732-45478751 Msa1106220:intron 35.0%
CTGAACCCTAATCGTATATT+AGG - chr7_3:45478756-45478775 Msa1106220:CDS 35.0%
GTAGAAGTGAGAAAAACTCT+AGG + chr7_3:45478821-45478840 None:intergenic 35.0%
TTGACAAATAGACAGGATAG+TGG + chr7_3:45479061-45479080 None:intergenic 35.0%
!!! CAGTGTTTTGACAAATAGAC+AGG + chr7_3:45479068-45479087 None:intergenic 35.0%
CTGTCTATTTGTCAAAACAC+TGG - chr7_3:45479066-45479085 Msa1106220:intron 35.0%
TTCATACTATGAGGTCTACA+TGG - chr7_3:45479104-45479123 Msa1106220:intron 35.0%
!! CACTTGCTTTTAACTCTAAG+AGG + chr7_3:45479143-45479162 None:intergenic 35.0%
! AGCAAGTGAGATTTCAGTTT+TGG - chr7_3:45479155-45479174 Msa1106220:intron 35.0%
!!! TCAGTTTTGGATGACAAAGA+TGG - chr7_3:45479168-45479187 Msa1106220:intron 35.0%
TACAATGTCCGAATTTCAAG+AGG - chr7_3:45479230-45479249 Msa1106220:intron 35.0%
AAAACTGAACCTCATAGACT+TGG - chr7_3:45479386-45479405 Msa1106220:intron 35.0%
GTTTGATGTATTCCAAGCAA+CGG - chr7_3:45479440-45479459 Msa1106220:intron 35.0%
!! AATGCGTTTAAAGTTGATGC+AGG - chr7_3:45479471-45479490 Msa1106220:intron 35.0%
CAGGTAATGAAGACAATAGA+AGG - chr7_3:45479490-45479509 Msa1106220:intron 35.0%
AAGCTAAGATGCAATTCTCT+TGG + chr7_3:45479833-45479852 None:intergenic 35.0%
TTCCAATGTCTAGTCTAATG+CGG + chr7_3:45479903-45479922 None:intergenic 35.0%
TATGTGTGATTTCAGAATCC+AGG - chr7_3:45480096-45480115 Msa1106220:intron 35.0%
CATAAACTAGAGACACCAAA+AGG - chr7_3:45480195-45480214 Msa1106220:intron 35.0%
TTCTAGCCAAGCTTTCAATT+TGG + chr7_3:45480238-45480257 None:intergenic 35.0%
TACTTTCAATAGCTCAGTGA+AGG - chr7_3:45480362-45480381 Msa1106220:intron 35.0%
ACTTTCAATAGCTCAGTGAA+GGG - chr7_3:45480363-45480382 Msa1106220:intron 35.0%
! CAGTAGTATGTTGAGCTTTT+TGG + chr7_3:45480407-45480426 None:intergenic 35.0%
ATACTACTGAGAGGTAAGTA+TGG - chr7_3:45480418-45480437 Msa1106220:intron 35.0%
! TTTTCTCTTACTGTGTAAGC+AGG - chr7_3:45480502-45480521 Msa1106220:CDS 35.0%
TTTCTCTTACTGTGTAAGCA+GGG - chr7_3:45480503-45480522 Msa1106220:CDS 35.0%
GCCACTAATACTGAAAAAGA+CGG - chr7_3:45480648-45480667 Msa1106220:CDS 35.0%
CCACTAATACTGAAAAAGAC+GGG - chr7_3:45480649-45480668 Msa1106220:CDS 35.0%
ATTTATCCAACTGTTCTGGT+TGG + chr7_3:45480975-45480994 None:intergenic 35.0%
CAATGTATGTGACCACAATT+CGG + chr7_3:45481097-45481116 None:intergenic 35.0%
TCAAAGACATAGTCTGAAGA+TGG + chr7_3:45481276-45481295 None:intergenic 35.0%
TTCAGACTATGTCTTTGACA+CGG - chr7_3:45481278-45481297 Msa1106220:intron 35.0%
AAGAAAGGGTTTCAGGAAAA+TGG - chr7_3:45481328-45481347 Msa1106220:intron 35.0%
ATTCAGTGAACCTTCTTTCA+AGG - chr7_3:45481569-45481588 Msa1106220:intron 35.0%
! TAGAGTTAAAGGTACATGCA+CGG - chr7_3:45481634-45481653 Msa1106220:intron 35.0%
ATTCAAACTGGAGATTCATG+TGG + chr7_3:45481667-45481686 None:intergenic 35.0%
!!! AGTGACCGTTTGTTTTGGTT+TGG + chr7_3:45477500-45477519 None:intergenic 40.0%
TGAAATTGAGGAGTGAGAGT+GGG + chr7_3:45477539-45477558 None:intergenic 40.0%
TTGAAATTGAGGAGTGAGAG+TGG + chr7_3:45477540-45477559 None:intergenic 40.0%
!! AGACAGGTTGATGAGAATTG+TGG + chr7_3:45477573-45477592 None:intergenic 40.0%
!! TTGTTGTTGATGGGGGTTTT+TGG + chr7_3:45477654-45477673 None:intergenic 40.0%
! AAATGGGGTTGTTGTTGATG+GGG + chr7_3:45477662-45477681 None:intergenic 40.0%
! GAAATGGGGTTGTTGTTGAT+GGG + chr7_3:45477663-45477682 None:intergenic 40.0%
! TGAAATGGGGTTGTTGTTGA+TGG + chr7_3:45477664-45477683 None:intergenic 40.0%
CCTTACCTTGGAAACTGAAA+TGG + chr7_3:45477679-45477698 None:intergenic 40.0%
CCATTTCAGTTTCCAAGGTA+AGG - chr7_3:45477676-45477695 Msa1106220:three_prime_UTR 40.0%
CAAGGTAAGGGTCATTGTTA+GGG - chr7_3:45477689-45477708 Msa1106220:exon 40.0%
ATCTCAAAGACCCATTTACC+AGG - chr7_3:45477817-45477836 Msa1106220:intron 40.0%
GGATTCGTTCTTTGATCAAG+AGG - chr7_3:45477960-45477979 Msa1106220:intron 40.0%
!! CTGATGATACCGGCTATTTT+CGG - chr7_3:45478021-45478040 Msa1106220:CDS 40.0%
TTACATCCACCGAAAATAGC+CGG + chr7_3:45478033-45478052 None:intergenic 40.0%
! AAAGTGAACGAACCCACTTT+TGG - chr7_3:45478293-45478312 Msa1106220:intron 40.0%
TCCTTTGGCTATGCACAATT+TGG - chr7_3:45478537-45478556 Msa1106220:intron 40.0%
TCTAATGGTATTAATGCCGG+TGG - chr7_3:45478597-45478616 Msa1106220:intron 40.0%
ATGCTCTCTTCATTTACCAC+CGG + chr7_3:45478616-45478635 None:intergenic 40.0%
TATTAGGGATGTAGTAGCTG+TGG - chr7_3:45478772-45478791 Msa1106220:CDS 40.0%
TGTAGTAGCTGTGGTGTAAT+TGG - chr7_3:45478781-45478800 Msa1106220:CDS 40.0%
!! TTCTTGATATTGGTAGTGCC+TGG - chr7_3:45478909-45478928 Msa1106220:CDS 40.0%
ACAGGCACATAAAAACAACC+AGG + chr7_3:45478930-45478949 None:intergenic 40.0%
!! TAAACGATGCTTGGTGTTTC+AGG - chr7_3:45478996-45479015 Msa1106220:intron 40.0%
!! AAACGATGCTTGGTGTTTCA+GGG - chr7_3:45478997-45479016 Msa1106220:intron 40.0%
! ACTCTAAGAGGTCGTAACAT+CGG + chr7_3:45479131-45479150 None:intergenic 40.0%
GGAGAAGACCTCTTGAAATT+CGG + chr7_3:45479241-45479260 None:intergenic 40.0%
AATAGAAGGAGCTGCAATGA+AGG - chr7_3:45479504-45479523 Msa1106220:intron 40.0%
ATAGAAGGAGCTGCAATGAA+GGG - chr7_3:45479505-45479524 Msa1106220:intron 40.0%
CACATTTGACAGTGCAAACA+AGG + chr7_3:45479565-45479584 None:intergenic 40.0%
ACAAACCAAGAACACCCTAT+AGG - chr7_3:45479604-45479623 Msa1106220:intron 40.0%
CAAACCAAGAACACCCTATA+GGG - chr7_3:45479605-45479624 Msa1106220:intron 40.0%
!! GTCAATTTGCTGTCCCTATA+GGG + chr7_3:45479621-45479640 None:intergenic 40.0%
CAAATTGACCCGTATATTGC+AGG - chr7_3:45479632-45479651 Msa1106220:intron 40.0%
TAGAGAGTCCTGCAATATAC+GGG + chr7_3:45479643-45479662 None:intergenic 40.0%
CTAGAGAGTCCTGCAATATA+CGG + chr7_3:45479644-45479663 None:intergenic 40.0%
GTATATTGCAGGACTCTCTA+GGG - chr7_3:45479643-45479662 Msa1106220:intron 40.0%
TATATTGCAGGACTCTCTAG+GGG - chr7_3:45479644-45479663 Msa1106220:intron 40.0%
! AACTTATAGCTTTACCAGGC+AGG + chr7_3:45479694-45479713 None:intergenic 40.0%
CATGACAAGAAAGAGCTTGA+GGG - chr7_3:45479763-45479782 Msa1106220:CDS 40.0%
ATGACAAGAAAGAGCTTGAG+GGG - chr7_3:45479764-45479783 Msa1106220:CDS 40.0%
GGGGGTGATATATAAGTTGT+AGG - chr7_3:45479783-45479802 Msa1106220:CDS 40.0%
TCCAATGTCTAGTCTAATGC+GGG + chr7_3:45479902-45479921 None:intergenic 40.0%
ATTGGAAACGTCAACAACTG+TGG - chr7_3:45479916-45479935 Msa1106220:CDS 40.0%
TCAGAATCCAGGAGAATATC+AGG - chr7_3:45480107-45480126 Msa1106220:intron 40.0%
ACAGATTCCTGATATTCTCC+TGG + chr7_3:45480117-45480136 None:intergenic 40.0%
! GTCTCTAGTTTATGAGCTGA+AGG + chr7_3:45480189-45480208 None:intergenic 40.0%
ACCAAAAGGTAACGTTGACA+TGG - chr7_3:45480209-45480228 Msa1106220:intron 40.0%
! TCCATGTCAACGTTACCTTT+TGG + chr7_3:45480213-45480232 None:intergenic 40.0%
TGGAAGCCAAATTGAAAGCT+TGG - chr7_3:45480229-45480248 Msa1106220:intron 40.0%
AAAGCTTGGCTAGAATCAAG+AGG - chr7_3:45480243-45480262 Msa1106220:intron 40.0%
AAGAGCTCACAACAAAGACT+TGG - chr7_3:45480273-45480292 Msa1106220:intron 40.0%
AAGCTCAACATACTACTGAG+AGG - chr7_3:45480409-45480428 Msa1106220:intron 40.0%
!!! CCCGTCTTTTTCAGTATTAG+TGG + chr7_3:45480652-45480671 None:intergenic 40.0%
! CGGGCATTATCAAAAGTACA+AGG - chr7_3:45480668-45480687 Msa1106220:CDS 40.0%
GCTATGTAGAACATGCATTC+TGG - chr7_3:45480771-45480790 Msa1106220:CDS 40.0%
CACACAAGTAATGACATACC+AGG + chr7_3:45480870-45480889 None:intergenic 40.0%
TCGAATAAATGCAGAGTGCA+GGG + chr7_3:45480895-45480914 None:intergenic 40.0%
ATCGAATAAATGCAGAGTGC+AGG + chr7_3:45480896-45480915 None:intergenic 40.0%
GTAATTGCATTCACCGTTGT+TGG - chr7_3:45480949-45480968 Msa1106220:CDS 40.0%
! CAGTTTCGATTTACTGACTG+CGG - chr7_3:45481051-45481070 Msa1106220:CDS 40.0%
TGGTACTATGATCCGAATTG+TGG - chr7_3:45481082-45481101 Msa1106220:CDS 40.0%
GCTGGTACATCTTTGCTTAA+TGG + chr7_3:45481193-45481212 None:intergenic 40.0%
! AATGGACTTTGTAGTACTGC+TGG + chr7_3:45481211-45481230 None:intergenic 40.0%
! GGAGAGAGAGCTTTTCTTAA+TGG + chr7_3:45481229-45481248 None:intergenic 40.0%
TTCCTGAAACCCTTTCTTAG+TGG + chr7_3:45481326-45481345 None:intergenic 40.0%
TGCAAGAAGTTCTGCTTTGA+AGG - chr7_3:45481372-45481391 Msa1106220:intron 40.0%
! TGTTAAGGCACCTTGAAAGA+AGG + chr7_3:45481582-45481601 None:intergenic 40.0%
AGAGGAGCTACTAGAGTTAA+AGG - chr7_3:45481623-45481642 Msa1106220:intron 40.0%
!!! CTGTTCTTTAGGGTCCATTT+TGG - chr7_3:45481720-45481739 Msa1106220:intron 40.0%
AAAACAACCACGTGCATGTT+TGG - chr7_3:45481795-45481814 Msa1106220:intron 40.0%
GTTTGGATTGACGATGAGAT+TGG - chr7_3:45481812-45481831 Msa1106220:intron 40.0%
GTTTGGATGAGCAGTAAGTT+TGG + chr7_3:45481909-45481928 None:intergenic 40.0%
ATTGTATTCCTTCAGGGCAT+AGG - chr7_3:45482046-45482065 Msa1106220:CDS 40.0%
!! TTAGTGGACTTTCTTCTCTG+AGG + chr7_3:45482099-45482118 None:intergenic 40.0%
!! GCATCAGCAAAAGCATTATG+AGG + chr7_3:45482174-45482193 None:intergenic 40.0%
TTAAGTGACCTGGAGAAGAT+TGG - chr7_3:45482214-45482233 Msa1106220:intron 40.0%
ACTTGTACTACTTGTTTGGC+AGG - chr7_3:45482331-45482350 Msa1106220:CDS 40.0%
! ACTCTTTGATGACAAAGCAG+AGG - chr7_3:45482385-45482404 Msa1106220:CDS 40.0%
!!! TGTTGATGGGGGTTTTTGGT+GGG + chr7_3:45477650-45477669 None:intergenic 45.0%
!! TTGTTGATGGGGGTTTTTGG+TGG + chr7_3:45477651-45477670 None:intergenic 45.0%
! AATGGGGTTGTTGTTGATGG+GGG + chr7_3:45477661-45477680 None:intergenic 45.0%
CAACCCCATTTCAGTTTCCA+AGG - chr7_3:45477671-45477690 Msa1106220:three_prime_UTR 45.0%
CCTAACAATGACCCTTACCT+TGG + chr7_3:45477691-45477710 None:intergenic 45.0%
CCAAGGTAAGGGTCATTGTT+AGG - chr7_3:45477688-45477707 Msa1106220:exon 45.0%
TTCTTGTGGTTTCGTGAGGA+AGG + chr7_3:45477725-45477744 None:intergenic 45.0%
CCATTTCTTGTGGTTTCGTG+AGG + chr7_3:45477729-45477748 None:intergenic 45.0%
CCTCACGAAACCACAAGAAA+TGG - chr7_3:45477726-45477745 Msa1106220:CDS 45.0%
TCGGAACGAGTGTTACAAGT+TGG - chr7_3:45477939-45477958 Msa1106220:intron 45.0%
!! ATGATACCGGCTATTTTCGG+TGG - chr7_3:45478024-45478043 Msa1106220:CDS 45.0%
!! GTGTTTGCTTATGGTGCTAC+TGG - chr7_3:45478060-45478079 Msa1106220:intron 45.0%
! GTAAGTTTGAGTTCAGAGGG+TGG - chr7_3:45478351-45478370 Msa1106220:intron 45.0%
GCCAAATTGTGCATAGCCAA+AGG + chr7_3:45478541-45478560 None:intergenic 45.0%
! ACAATTTGGCTCAGCTCAGA+TGG - chr7_3:45478551-45478570 Msa1106220:intron 45.0%
GCTCAGATGGTTATAGCCAT+AGG - chr7_3:45478564-45478583 Msa1106220:intron 45.0%
!! CTAGCAATTTTGGTGGAAGG+AGG - chr7_3:45478638-45478657 Msa1106220:intron 45.0%
!! AGGATAGTGGACATTGCCAA+CGG + chr7_3:45479048-45479067 None:intergenic 45.0%
AAGATGGCCATATTCACCTC+AGG - chr7_3:45479184-45479203 Msa1106220:intron 45.0%
AGATGGCCATATTCACCTCA+GGG - chr7_3:45479185-45479204 Msa1106220:intron 45.0%
ATAGTCCCCTGAGGTGAATA+TGG + chr7_3:45479194-45479213 None:intergenic 45.0%
TTTCAAGAGGTCTTCTCCAG+TGG - chr7_3:45479243-45479262 Msa1106220:intron 45.0%
TCTTCTCCAGTGGTATTCAG+AGG - chr7_3:45479253-45479272 Msa1106220:intron 45.0%
!! TACTATCGACTCCTCCTGAT+GGG - chr7_3:45479343-45479362 Msa1106220:intron 45.0%
ACAAGACTTCCATTCCCATC+AGG + chr7_3:45479360-45479379 None:intergenic 45.0%
! GGGAATGGAAGTCTTGTATG+TGG - chr7_3:45479363-45479382 Msa1106220:intron 45.0%
AGGTTACCGTCCACTCAATT+GGG - chr7_3:45479410-45479429 Msa1106220:intron 45.0%
CATTACCCCAATTGAGTGGA+CGG + chr7_3:45479419-45479438 None:intergenic 45.0%
GTCCACTCAATTGGGGTAAT+GGG - chr7_3:45479418-45479437 Msa1106220:intron 45.0%
AACCCATTACCCCAATTGAG+TGG + chr7_3:45479423-45479442 None:intergenic 45.0%
GATGTATTCCAAGCAACGGA+AGG - chr7_3:45479444-45479463 Msa1106220:intron 45.0%
CATTATGTCCTTCCGTTGCT+TGG + chr7_3:45479455-45479474 None:intergenic 45.0%
!! GGTCAATTTGCTGTCCCTAT+AGG + chr7_3:45479622-45479641 None:intergenic 45.0%
CGTATATTGCAGGACTCTCT+AGG - chr7_3:45479642-45479661 Msa1106220:intron 45.0%
ATATTGCAGGACTCTCTAGG+GGG - chr7_3:45479645-45479664 Msa1106220:intron 45.0%
GCATGACAAGAAAGAGCTTG+AGG - chr7_3:45479762-45479781 Msa1106220:CDS 45.0%
TGACAAGAAAGAGCTTGAGG+GGG - chr7_3:45479765-45479784 Msa1106220:CDS 45.0%
AATGTCTAGTCTAATGCGGG+TGG + chr7_3:45479899-45479918 None:intergenic 45.0%
ACCCGCATTAGACTAGACAT+TGG - chr7_3:45479898-45479917 Msa1106220:CDS 45.0%
! TTAGTTTGGCTGCTCGATCA+AGG - chr7_3:45480145-45480164 Msa1106220:intron 45.0%
CCAGTTGTGCAAAAAACTCC+CGG - chr7_3:45480309-45480328 Msa1106220:intron 45.0%
TGATCTCCTAGCAGAGCTAA+TGG + chr7_3:45480340-45480359 None:intergenic 45.0%
TTCAATAGCTCAGTGAAGGG+TGG - chr7_3:45480366-45480385 Msa1106220:intron 45.0%
TGAGTGAGTGTCTCAAGTGA+AGG - chr7_3:45480589-45480608 Msa1106220:CDS 45.0%
! GAACATGCATTCTGGTGTTG+AGG - chr7_3:45480779-45480798 Msa1106220:CDS 45.0%
TAAGAGAGAGACTGAGCATG+AGG - chr7_3:45480809-45480828 Msa1106220:CDS 45.0%
TGATTCCAGTGGTGCCTTAT+TGG + chr7_3:45480835-45480854 None:intergenic 45.0%
CTCTCTCCCATCAACATCAA+TGG - chr7_3:45481241-45481260 Msa1106220:intron 45.0%
CAACCTGCTCCACTAAGAAA+GGG - chr7_3:45481314-45481333 Msa1106220:intron 45.0%
AAACCCTTTCTTAGTGGAGC+AGG + chr7_3:45481320-45481339 None:intergenic 45.0%
CTCCACTAAGAAAGGGTTTC+AGG - chr7_3:45481321-45481340 Msa1106220:intron 45.0%
CTTGCACTGAATTTGTCCAG+TGG + chr7_3:45481358-45481377 None:intergenic 45.0%
! TTTTGTCTCCTATGCCCTGA+AGG + chr7_3:45482057-45482076 None:intergenic 45.0%
TCAGGGCATAGGAGACAAAA+TGG - chr7_3:45482057-45482076 Msa1106220:CDS 45.0%
CATGTTGCAGTTAAGTGACC+TGG - chr7_3:45482204-45482223 Msa1106220:intron 45.0%
AAGAGAGACCAATCTTCTCC+AGG + chr7_3:45482225-45482244 None:intergenic 45.0%
!! GATTGGTCTCTCTTTGAAGC+AGG - chr7_3:45482231-45482250 Msa1106220:intron 45.0%
!!! GTTGATGGGGGTTTTTGGTG+GGG + chr7_3:45477649-45477668 None:intergenic 50.0%
GTGGTTTCGTGAGGAAGGAA+GGG + chr7_3:45477720-45477739 None:intergenic 50.0%
TGTGGTTTCGTGAGGAAGGA+AGG + chr7_3:45477721-45477740 None:intergenic 50.0%
TGGGTCATCGCCATTTCTTG+TGG + chr7_3:45477739-45477758 None:intergenic 50.0%
!! GCTTATGGTGCTACTGGTAG+TGG - chr7_3:45478066-45478085 Msa1106220:intron 50.0%
! TTTGAGTTCAGAGGGTGGTG+AGG - chr7_3:45478356-45478375 Msa1106220:intron 50.0%
CAGGGAACTGAAGAACAACC+TGG - chr7_3:45479015-45479034 Msa1106220:intron 50.0%
GATGGCCATATTCACCTCAG+GGG - chr7_3:45479186-45479205 Msa1106220:intron 50.0%
GAACTTGAGATAGTCCCCTG+AGG + chr7_3:45479203-45479222 None:intergenic 50.0%
TTTGCGCCTCTGAATACCAC+TGG + chr7_3:45479262-45479281 None:intergenic 50.0%
TCCTGCTGGATACGTCATTG+AGG + chr7_3:45479299-45479318 None:intergenic 50.0%
!! GTACTATCGACTCCTCCTGA+TGG - chr7_3:45479342-45479361 Msa1106220:intron 50.0%
AGACTTCCATTCCCATCAGG+AGG + chr7_3:45479357-45479376 None:intergenic 50.0%
CTGAACCTCATAGACTTGGC+AGG - chr7_3:45479390-45479409 Msa1106220:intron 50.0%
GGTAACCTGCCAAGTCTATG+AGG + chr7_3:45479398-45479417 None:intergenic 50.0%
CAGGTTACCGTCCACTCAAT+TGG - chr7_3:45479409-45479428 Msa1106220:intron 50.0%
GGTTACCGTCCACTCAATTG+GGG - chr7_3:45479411-45479430 Msa1106220:intron 50.0%
CGTCCACTCAATTGGGGTAA+TGG - chr7_3:45479417-45479436 Msa1106220:intron 50.0%
! CTGTCCCTATAGGGTGTTCT+TGG + chr7_3:45479612-45479631 None:intergenic 50.0%
!!! CCGGGAGTTTTTTGCACAAC+TGG + chr7_3:45480312-45480331 None:intergenic 50.0%
! AGCAGAGCTAATGGTGGAAC+CGG + chr7_3:45480331-45480350 None:intergenic 50.0%
!! GTTCCACCATTAGCTCTGCT+AGG - chr7_3:45480331-45480350 Msa1106220:intron 50.0%
TCTCCTAGCAGAGCTAATGG+TGG + chr7_3:45480337-45480356 None:intergenic 50.0%
TACTGTGTAAGCAGGGCCTT+TGG - chr7_3:45480510-45480529 Msa1106220:CDS 50.0%
GACTGAGCATGAGGCCAATA+AGG - chr7_3:45480818-45480837 Msa1106220:CDS 50.0%
! CTGTTCTGGTTGGCCAACAA+CGG + chr7_3:45480965-45480984 None:intergenic 50.0%
TGTTGGCCAACCAGAACAGT+TGG - chr7_3:45480966-45480985 Msa1106220:CDS 50.0%
! TACTGACTGCGGTGAATGTG+TGG - chr7_3:45481062-45481081 Msa1106220:CDS 50.0%
GTGGAGCAGGTTGCAGAAAA+AGG + chr7_3:45481307-45481326 None:intergenic 50.0%
GCAACCTGCTCCACTAAGAA+AGG - chr7_3:45481313-45481332 Msa1106220:intron 50.0%
TCAGGAAAATGGCACTCCAC+TGG - chr7_3:45481339-45481358 Msa1106220:intron 50.0%
CGTCAATCCAAACATGCACG+TGG + chr7_3:45481805-45481824 None:intergenic 50.0%
TTGAGGAGTGAGAGTGGGAG+AGG + chr7_3:45477534-45477553 None:intergenic 55.0%
! ACAACCTGGCTTGATGCCGT+TGG - chr7_3:45479029-45479048 Msa1106220:intron 55.0%
ATTGCCAACGGCATCAAGCC+AGG + chr7_3:45479036-45479055 None:intergenic 55.0%
AGGCGCAAAACTGCACACAC+AGG - chr7_3:45479273-45479292 Msa1106220:CDS 55.0%
GCCTCAATGACGTATCCAGC+AGG - chr7_3:45479295-45479314 Msa1106220:CDS 55.0%
GACGTATCCAGCAGGAGTCA+TGG - chr7_3:45479303-45479322 Msa1106220:CDS 55.0%
AAGCACTCCATGACTCCTGC+TGG + chr7_3:45479313-45479332 None:intergenic 55.0%
TCGACTCCTCCTGATGGGAA+TGG - chr7_3:45479348-45479367 Msa1106220:intron 55.0%
TACCAGGCAGGCAACCATGA+GGG + chr7_3:45479682-45479701 None:intergenic 55.0%
TTACCAGGCAGGCAACCATG+AGG + chr7_3:45479683-45479702 None:intergenic 55.0%
! GCAGAGCTAATGGTGGAACC+GGG + chr7_3:45480330-45480349 None:intergenic 55.0%
! TGAGGCCAATAAGGCACCAC+TGG - chr7_3:45480827-45480846 Msa1106220:CDS 55.0%
GGGATCTAGTCGTGCCCTCA+TGG - chr7_3:45479665-45479684 Msa1106220:intron 60.0%
TGCCCTCATGGTTGCCTGCC+TGG - chr7_3:45479677-45479696 Msa1106220:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 45477466 45482662 45477466 ID=Msa1106220;Name=Msa1106220
chr7_3 mRNA 45477466 45482662 45477466 ID=Msa1106220-mRNA-1;Parent=Msa1106220;Name=Msa1106220-mRNA-1;_AED=0.09;_eAED=0.09;_QI=152|1|1|1|1|1|12|238|665
chr7_3 exon 45477466 45477775 45477466 ID=Msa1106220-mRNA-1:exon:9401;Parent=Msa1106220-mRNA-1
chr7_3 exon 45477876 45477914 45477876 ID=Msa1106220-mRNA-1:exon:9400;Parent=Msa1106220-mRNA-1
chr7_3 exon 45478005 45478067 45478005 ID=Msa1106220-mRNA-1:exon:9399;Parent=Msa1106220-mRNA-1
chr7_3 exon 45478484 45478505 45478484 ID=Msa1106220-mRNA-1:exon:9398;Parent=Msa1106220-mRNA-1
chr7_3 exon 45478604 45478650 45478604 ID=Msa1106220-mRNA-1:exon:9397;Parent=Msa1106220-mRNA-1
chr7_3 exon 45478735 45478943 45478735 ID=Msa1106220-mRNA-1:exon:9396;Parent=Msa1106220-mRNA-1
chr7_3 exon 45479258 45479348 45479258 ID=Msa1106220-mRNA-1:exon:9395;Parent=Msa1106220-mRNA-1
chr7_3 exon 45479541 45479604 45479541 ID=Msa1106220-mRNA-1:exon:9394;Parent=Msa1106220-mRNA-1
chr7_3 exon 45479698 45480017 45479698 ID=Msa1106220-mRNA-1:exon:9393;Parent=Msa1106220-mRNA-1
chr7_3 exon 45480430 45481110 45480430 ID=Msa1106220-mRNA-1:exon:9392;Parent=Msa1106220-mRNA-1
chr7_3 exon 45482021 45482189 45482021 ID=Msa1106220-mRNA-1:exon:9391;Parent=Msa1106220-mRNA-1
chr7_3 exon 45482290 45482662 45482290 ID=Msa1106220-mRNA-1:exon:9390;Parent=Msa1106220-mRNA-1
chr7_3 five_prime_UTR 45482511 45482662 45482511 ID=Msa1106220-mRNA-1:five_prime_utr;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45482290 45482510 45482290 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45482021 45482189 45482021 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45480430 45481110 45480430 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45479698 45480017 45479698 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45479541 45479604 45479541 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45479258 45479348 45479258 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45478735 45478943 45478735 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45478604 45478650 45478604 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45478484 45478505 45478484 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45478005 45478067 45478005 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45477876 45477914 45477876 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 CDS 45477704 45477775 45477704 ID=Msa1106220-mRNA-1:cds;Parent=Msa1106220-mRNA-1
chr7_3 three_prime_UTR 45477466 45477703 45477466 ID=Msa1106220-mRNA-1:three_prime_utr;Parent=Msa1106220-mRNA-1
Gene Sequence

>Msa1106220

ATGGCTACTACTCTTAATTACTCATGCACCCCACCAAAAACCCCCATCAACAACAACCCCATTTCAGTTTCCAAGGTAAGGGTCATTGTTAGGGTTAGACCCTTCCTTCCTCACGAAACCACAAGAAATGGCGATGACCCAGTTTCTTGTATCTCACTTTTAGATCAAGATTTTCAATCCCAAAATGATGTAGCAGTTTATCTCAAAGACCCATTTACCAGTCGGAACGAGTGTTACAAGTTGGATTCGTTCTTTGATCAAGAGGATAACAATGTGGGACAGATATTTGAGAGAGAAGTTAGTCTGATGATACCGGCTATTTTCGGTGGATGTAATGCTACTGTGTTTGCTTATGGTGCTACTGGTAGTGGAAAGACATATACTATGCAGGGAACTGAAGAACAACCTGGCTTGATGCCGTTGGCAATGTCCACTATCCTGTCTATTTGTCAAAACACTGGTAGCACAGCTCAAATTTCATACTATGAGGTCTACATGGACCGATGTTACGACCTCTTAGAGTTAAAAGCAAGTGAGATTTCAGTTTTGGATGACAAAGATGGCCATATTCACCTCAGGGGACTATCTCAAGTTCCTGTAAATACAATGTCCGAATTTCAAGAGGTCTTCTCCAGTGGTATTCAGAGGCGCAAAACTGCACACACAGGCCTCAATGACGTATCCAGCAGGAGTCATGGAGTGCTTGTGATATCTGTACTATCGACTCCTCCTGATGGGAATGGAAGTCTTGTATGTGGAAAACTGAACCTCATAGACTTGGCAGGTTACCGTCCACTCAATTGGGGTAATGGGTTTGATGTATTCCAAGCAACGGAAGGACATAATGCGTTTAAAGTTGATGCAGGTAATGAAGACAATAGAAGGAGCTGCAATGAAGGGATTCGTCTTCAAGAGAGTGCTAAGATAAATCAGTCCTTGTTTGCACTGTCAAATGTGATATATGCGTTGAACAACAACAAACCAAGAACACCCTATAGGGACAGCAAATTGACCCGTATATTGCAGGACTCTCTAGGGGGATCTAGTCGTGCCCTCATGGTTGCCTGCCTGAATCCAGGAGAATATCAGGAATCTGTTCATACTGTTAGTTTGGCTGCTCGATCAAGGCACGTCTCTAATTTTGTACCTTCAGCTCATAAACTAGAGACACCAAAAGGTAACGTTGACATGGAAGCCAAATTGAAAGCTTGGCTAGAATCAAGAGGTAAGACAAAGAGCTCACAACAAAGACTTGGAGCATTTAATTCTCCAGTTGTGCAAAAAACTCCCGGTTCCACCATTAGCTCTGCTAGGAGATCAGTTACTTTCAATAGCTCAGTGAAGGGTGGCAGAACTTTCATCAACCAAAAAGCTCAACATACTACTGAGAGGGCCTTTGGTGTCTCTTTTAGAAATTTACTAGATGGTGAAGTTGCTTTTGATTCTTGTAAAAAGAACATGCATTCTGGTGTTGAGGACAATGATAAGAGAGAGACTGAGCATGAGGCCAATAAGGCACCACTGGAATCATATAATGATGTACCTGATGAACCATTAAGCAAAGATGTACCAGCAGTACTACAAAGTCCATTAAGAAAAGCTCTCTCTCCCATCAACATCAATGGTATTCAAAACCATCTTCAGACTATGTCTTTGACACGGACACCTTTTTCTGCAACCTGCTCCACTAAGAAAGGGTTTCAGGAAAATGGCACTCCACTGGACAAATTCAGTGCAAGAAGTTCTGCTTTGAAGAACTGTCTAGTTCAAGAATACATTGATTTGTTAAATAATGCAAGCAGAGAGGAGCTACTAGAGTTAAAGGGCATAGGAGACAAAATGGCAGATTACATTATTGACCTCAGAGAAGAAAGTCCACTAAAATCGTTAAGTGACCTGGAGAAGATTGGTCTCTCTTTGAAGCAGGCTCATAACCTGTTTACTAAAGCTGCAAAAAAACTCTTTGATGACAAAGCAGAGGATTCAATACTCAATTGA

Protein sequence

>Msa1106220

MATTLNYSCTPPKTPINNNPISVSKVRVIVRVRPFLPHETTRNGDDPVSCISLLDQDFQSQNDVAVYLKDPFTSRNECYKLDSFFDQEDNNVGQIFEREVSLMIPAIFGGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSTILSICQNTGSTAQISYYEVYMDRCYDLLELKASEISVLDDKDGHIHLRGLSQVPVNTMSEFQEVFSSGIQRRKTAHTGLNDVSSRSHGVLVISVLSTPPDGNGSLVCGKLNLIDLAGYRPLNWGNGFDVFQATEGHNAFKVDAGNEDNRRSCNEGIRLQESAKINQSLFALSNVIYALNNNKPRTPYRDSKLTRILQDSLGGSSRALMVACLNPGEYQESVHTVSLAARSRHVSNFVPSAHKLETPKGNVDMEAKLKAWLESRGKTKSSQQRLGAFNSPVVQKTPGSTISSARRSVTFNSSVKGGRTFINQKAQHTTERAFGVSFRNLLDGEVAFDSCKKNMHSGVEDNDKRETEHEANKAPLESYNDVPDEPLSKDVPAVLQSPLRKALSPININGIQNHLQTMSLTRTPFSATCSTKKGFQENGTPLDKFSARSSALKNCLVQEYIDLLNNASREELLELKGIGDKMADYIIDLREESPLKSLSDLEKIGLSLKQAHNLFTKAAKKLFDDKAEDSILN*