AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1169690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169690 MtrunA17_Chr7g0263671 96.419 754 23 2 1 754 1 750 0.0 1452
Msa1169690 MtrunA17_Chr1g0181631 46.861 446 208 9 220 649 46 478 7.63e-56 199
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169690 AT3G53320.1 34.653 303 154 12 19 297 16 298 2.34e-24 108
Msa1169690 AT2G37070.2 40.602 133 64 5 19 144 18 142 8.64e-16 81.3
Msa1169690 AT2G37070.1 40.602 133 64 5 19 144 18 142 1.16e-15 81.3

Find 166 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCGTCTAGCTCTGGGATTC+TGG 0.097225 7_4:+62732315 Msa1169690:CDS
GGTAGCTGCACTAGCAATTT+TGG 0.153480 7_4:-62732287 None:intergenic
TTTCTTCTTGCGGAATTAAA+TGG 0.190171 7_4:-62733624 None:intergenic
TCCAATTACCACCAAAATTC+AGG 0.233828 7_4:+62731709 Msa1169690:CDS
TCAAAATATCCGATGCTAAA+AGG 0.236588 7_4:-62735239 None:intergenic
TGACTGGCCAGGAGTTAATT+TGG 0.237626 7_4:-62733529 None:intergenic
GTGTTAATGTTTAGGGGTTT+TGG 0.243930 7_4:+62732066 Msa1169690:intron
AACACTAAGCGATGCTCTTT+TGG 0.247393 7_4:-62733289 None:intergenic
ACAAACCTTTGCTTAATTCT+TGG 0.254223 7_4:-62734859 None:intergenic
TCAAGAAACAAAACTGAATC+TGG 0.266121 7_4:+62733714 Msa1169690:CDS
CCAAAGATTGGTTTCTTTGA+TGG 0.281624 7_4:+62734083 Msa1169690:CDS
GTGTCAAGAGCATCTGTTAT+TGG 0.287645 7_4:+62733468 Msa1169690:CDS
CTTGCAGCTTTGCTTTGATT+TGG 0.294963 7_4:-62734406 None:intergenic
CCAGCTGTTGCGAGAGTAAT+CGG 0.318243 7_4:+62732981 Msa1169690:CDS
TAAGTTGCTACCGGAAGATT+TGG 0.323444 7_4:-62733580 None:intergenic
AATGATTCATCAATATGATT+TGG 0.323598 7_4:-62734488 None:intergenic
CCAGCTCCTGCAAAACCTTC+AGG 0.325778 7_4:+62734044 Msa1169690:CDS
TGAAACTGAAAGTGTTGATT+TGG 0.331552 7_4:+62732210 Msa1169690:CDS
CCATACCATTGGATTTATCT+TGG 0.343022 7_4:-62734796 None:intergenic
TGTGAATCCATTTCGACCTT+AGG 0.344717 7_4:+62732169 Msa1169690:CDS
GACAAGGCAAAACACATAAA+TGG 0.355451 7_4:+62733333 Msa1169690:CDS
AGCGAAGCCCGATGGTGTTC+TGG 0.355565 7_4:-62733691 None:intergenic
TCGTCTAGCTCTGGGATTCT+GGG 0.368045 7_4:+62732316 Msa1169690:CDS
CCCAGAGCTAGACGACATTC+TGG 0.369940 7_4:-62732308 None:intergenic
CAAAGATTGGTTTCTTTGAT+GGG 0.372758 7_4:+62734084 Msa1169690:CDS
CACCCCTACCAGCATTGATA+TGG 0.384562 7_4:+62734901 Msa1169690:CDS
AGCAACTTATCTGATAATAT+TGG 0.387973 7_4:+62733594 Msa1169690:CDS
TCCGATGCTAAAAGGATTCA+TGG 0.388467 7_4:-62735231 None:intergenic
ACCAGAATGTCGTCTAGCTC+TGG 0.390989 7_4:+62732307 Msa1169690:CDS
CGACTGCCTTCGCCAAAGAT+TGG 0.391284 7_4:+62734071 Msa1169690:CDS
CCATCAAAGAAACCAATCTT+TGG 0.394047 7_4:-62734083 None:intergenic
GGGCAGGAGGCTCAGCAAAA+TGG 0.394670 7_4:+62733972 Msa1169690:CDS
TATACATCCTCTTCAATCCT+TGG 0.397018 7_4:-62732139 None:intergenic
GCAAGAAGAAACGTTATTGC+TGG 0.399942 7_4:+62733636 Msa1169690:CDS
GAATTTGCACTAGGCTTTGT+TGG 0.406749 7_4:-62733255 None:intergenic
ATCAACCAACTTACCTGTGC+TGG 0.411015 7_4:+62735015 Msa1169690:CDS
TTGGATAATATTGTGGACTT+AGG 0.412150 7_4:-62733510 None:intergenic
TCTTTCGCAGATTGAACTTA+GGG 0.413908 7_4:-62731916 None:intergenic
TGGTGGTAATTGGAAGAAAC+GGG 0.413945 7_4:-62731700 None:intergenic
TGTTTCAGAAATTTGAACTT+AGG 0.415299 7_4:-62731540 None:intergenic
TACATCACTGTCGCATGAAA+TGG 0.416230 7_4:+62734598 Msa1169690:CDS
TCTTTGACATCGTTGTTTAT+CGG 0.416620 7_4:-62731625 None:intergenic
TTGGTGGTAATTGGAAGAAA+CGG 0.418940 7_4:-62731701 None:intergenic
CTCTTTCGCAGATTGAACTT+AGG 0.423818 7_4:-62731917 None:intergenic
TCAGCAACTTCCAAATCTTC+CGG 0.426512 7_4:+62733570 Msa1169690:CDS
ATCGCTCCCTAAGGTCGAAA+TGG 0.427949 7_4:-62732176 None:intergenic
GTATAAATTCTCAGATTTCT+CGG 0.431931 7_4:+62733931 Msa1169690:CDS
TTTGGAGGGTGATTTGTTTG+AGG 0.435278 7_4:+62732228 Msa1169690:CDS
CCCTCCCGCCAGAACACCAT+CGG 0.440512 7_4:+62733683 Msa1169690:CDS
GTGAATCCATTTCGACCTTA+GGG 0.441776 7_4:+62732170 Msa1169690:CDS
CATCAATATGATTTGGATGT+GGG 0.447348 7_4:-62734481 None:intergenic
GAACTATCACACATGTGTTT+AGG 0.449363 7_4:-62733846 None:intergenic
GAAGATTTAAATCCATGTAA+TGG 0.458165 7_4:+62735318 Msa1169690:three_prime_UTR
AGCAATAACGTTTCTTCTTG+CGG 0.458182 7_4:-62733634 None:intergenic
AACACATGTGTGATAGTTCA+AGG 0.461632 7_4:+62733850 Msa1169690:CDS
CATCTGTTATTGGAGGTTCA+AGG 0.462665 7_4:+62733478 Msa1169690:CDS
TTTGTAATGCTTTCCAGCAC+AGG 0.466793 7_4:-62735028 None:intergenic
ATCAACACTTTCAGTTTCAA+AGG 0.467451 7_4:-62732206 None:intergenic
TGAAGGCATCACCTGCTTCA+AGG 0.467661 7_4:+62732952 Msa1169690:CDS
CGGCGAAAGTGATGTGAAGA+AGG 0.479720 7_4:-62731575 None:intergenic
TGTGGTATTTGTGTAAAAGT+AGG 0.484204 7_4:-62733026 None:intergenic
CTGGCGGGAGGGCGAGATGA+GGG 0.488219 7_4:-62733672 None:intergenic
TTGTCTTGGTTGATATTGAC+TGG 0.491915 7_4:-62733545 None:intergenic
GAACAAGAAGAAAATGAACT+TGG 0.498335 7_4:+62735260 Msa1169690:three_prime_UTR
ATTCGATAACTCCATACCAT+TGG 0.498382 7_4:-62734807 None:intergenic
GCTTTCCAGCACAGGTAAGT+TGG 0.501226 7_4:-62735020 None:intergenic
GAATTATCAGTCAAAGTGTA+AGG 0.507200 7_4:+62733994 Msa1169690:CDS
ATCTGCGAAAGAGTTTAGCT+TGG 0.507998 7_4:+62731927 Msa1169690:CDS
ATCTGTTATTGGAGGTTCAA+GGG 0.509068 7_4:+62733479 Msa1169690:CDS
TCTGCGAAAGAGTTTAGCTT+GGG 0.510391 7_4:+62731928 Msa1169690:CDS
TTCTTTGTTTCAGATGTCTG+AGG 0.511993 7_4:-62731887 None:intergenic
CCGCTAGTTCTGTTAGTGAC+TGG 0.512313 7_4:+62733793 Msa1169690:CDS
AATGTGACTTGGCGAATAGA+TGG 0.518814 7_4:-62731443 None:intergenic
CAAGAAACAAAACTGAATCT+GGG 0.519601 7_4:+62733715 Msa1169690:CDS
TCATCAATATGATTTGGATG+TGG 0.521364 7_4:-62734482 None:intergenic
CCGATTACTCTCGCAACAGC+TGG 0.522284 7_4:-62732981 None:intergenic
TTGGTTGATATTGACTGGCC+AGG 0.525155 7_4:-62733540 None:intergenic
AGTTAATTTGGATAATATTG+TGG 0.526161 7_4:-62733517 None:intergenic
GGCTTTGTTGGCACCTTCGA+CGG 0.527206 7_4:-62733243 None:intergenic
CCAAGATAAATCCAATGGTA+TGG 0.527305 7_4:+62734796 Msa1169690:CDS
TAGGGGTGACACATTGATAC+GGG 0.528043 7_4:-62734886 None:intergenic
GCTGGTAGATTCCTTGAAGC+AGG 0.530424 7_4:-62732963 None:intergenic
TCCACATATCATAAGCGAAA+AGG 0.535480 7_4:+62733311 Msa1169690:CDS
GAACATAAATTCCAAGACTC+AGG 0.536096 7_4:+62734724 Msa1169690:CDS
TATTGGAGGTTCAAGGGGTA+CGG 0.538224 7_4:+62733485 Msa1169690:CDS
GCTAGAGTTACTATCAATGC+TGG 0.539482 7_4:-62733874 None:intergenic
ATCTATTTCAAAGCCGTCGA+AGG 0.540506 7_4:+62733230 Msa1169690:CDS
GGCAAATAAATACCATTACA+TGG 0.542601 7_4:-62735330 None:intergenic
CCAGAATGTCGTCTAGCTCT+GGG 0.542743 7_4:+62732308 Msa1169690:CDS
AGCTGCTAGAAAGGTTGGCA+TGG 0.542857 7_4:+62732451 Msa1169690:intron
AAGCCCGATGGTGTTCTGGC+GGG 0.543148 7_4:-62733687 None:intergenic
TATCGGAGAAGCGTCGGAGT+CGG 0.545556 7_4:-62731608 None:intergenic
TGACTCCCTCCTTGTAGCGA+CGG 0.546341 7_4:-62733208 None:intergenic
TCTTTGGCGAAGGCAGTCGC+AGG 0.546881 7_4:-62734067 None:intergenic
AACTGAAAGTGTTGATTTGG+AGG 0.547878 7_4:+62732213 Msa1169690:CDS
TCTGGCGGGAGGGCGAGATG+AGG 0.548702 7_4:-62733673 None:intergenic
TATAATTGAAGGTGTTGAGA+AGG 0.549903 7_4:+62732108 Msa1169690:CDS
GTAGGGGTGACACATTGATA+CGG 0.550011 7_4:-62734887 None:intergenic
TGTTAGTGACTGGTCTTCAG+AGG 0.550980 7_4:+62733803 Msa1169690:CDS
GACTCCCTCCTTGTAGCGAC+GGG 0.552128 7_4:-62733207 None:intergenic
TGCCATATCAATGCTGGTAG+GGG 0.552572 7_4:-62734903 None:intergenic
ATATTATCCAAATTAACTCC+TGG 0.553361 7_4:+62733522 Msa1169690:CDS
TCAGACACTAATGCAGATCA+AGG 0.554880 7_4:+62733909 Msa1169690:CDS
ACTGACCCGTGTCGATCACC+AGG 0.556843 7_4:+62734646 Msa1169690:CDS
TGATAGTAACTCTAGCAGAA+AGG 0.557439 7_4:+62733881 Msa1169690:CDS
AACTTAGGAGTAGCGGCTAG+TGG 0.558153 7_4:-62731525 None:intergenic
GAGTTAACTAGTATAATTGA+AGG 0.559085 7_4:+62732097 Msa1169690:CDS
TTGCCATATCAATGCTGGTA+GGG 0.559511 7_4:-62734904 None:intergenic
GGTTAAACTATCGCTCCCTA+AGG 0.567132 7_4:-62732185 None:intergenic
CAGCTGTTGCGAGAGTAATC+GGG 0.570911 7_4:+62732982 Msa1169690:CDS
ATTATCAGATAAGTTGCTAC+CGG 0.571364 7_4:-62733589 None:intergenic
CACTGTCCTGGTGATCGACA+CGG 0.577273 7_4:-62734652 None:intergenic
TTTCTTGAAGCGAAGCCCGA+TGG 0.578631 7_4:-62733699 None:intergenic
CAGTCACTAACAGAACTAGC+GGG 0.579052 7_4:-62733792 None:intergenic
ACTGTCCTGGTGATCGACAC+GGG 0.579748 7_4:-62734651 None:intergenic
GAAATTGTGGAATTTGCACT+AGG 0.580738 7_4:-62733264 None:intergenic
CTTCTTCACATCACTTTCGC+CGG 0.581138 7_4:+62731576 Msa1169690:five_prime_UTR
AGAACAAGTACTTAAAGACT+TGG 0.583177 7_4:-62735158 None:intergenic
GGATTTCAAAGACAAACAAA+AGG 0.584203 7_4:-62731503 None:intergenic
CCGATGGTGTTCTGGCGGGA+GGG 0.584412 7_4:-62733683 None:intergenic
GGCTTGCTAAAACATGGAGC+AGG 0.585668 7_4:+62734368 Msa1169690:CDS
AAAGATTGGTTTCTTTGATG+GGG 0.587295 7_4:+62734085 Msa1169690:CDS
TGGTGATCGACACGGGTCAG+TGG 0.589738 7_4:-62734644 None:intergenic
AAGTGTAAGGACTGCTTCTG+TGG 0.593654 7_4:+62734007 Msa1169690:CDS
GCGGGAGGGCGAGATGAGGG+AGG 0.596464 7_4:-62733669 None:intergenic
CCACACTCTTCTGTGTCTCA+CGG 0.596515 7_4:+62734347 Msa1169690:CDS
ACTTAGGAGTAGCGGCTAGT+GGG 0.597098 7_4:-62731524 None:intergenic
AAGAAACCAATCTTTGGCGA+AGG 0.598647 7_4:-62734077 None:intergenic
AAATTTGAACTTAGGAGTAG+CGG 0.599706 7_4:-62731532 None:intergenic
GAAGGCAGTCGCAGGCCTGA+AGG 0.602125 7_4:-62734059 None:intergenic
TCTGTTATTGGAGGTTCAAG+GGG 0.602408 7_4:+62733480 Msa1169690:CDS
GATTGTTTGATCGAACAAGT+TGG 0.602661 7_4:+62734695 Msa1169690:CDS
GGCGAAAGTGATGTGAAGAA+GGG 0.603581 7_4:-62731574 None:intergenic
GGGATCGAGAAGAGAATCAT+CGG 0.607587 7_4:-62731680 None:intergenic
TCAAGAGCATCTGTTATTGG+AGG 0.609151 7_4:+62733471 Msa1169690:CDS
GTTGTTTATCGGAGAAGCGT+CGG 0.613172 7_4:-62731614 None:intergenic
GATTCATGGCAATGAACCCA+AGG 0.615849 7_4:-62735217 None:intergenic
AACATTACCAAGGATTGAAG+AGG 0.617361 7_4:+62732132 Msa1169690:CDS
TGAAGTTGCCATATCAATGC+TGG 0.621101 7_4:-62734909 None:intergenic
GAAGCCCGATGGTGTTCTGG+CGG 0.624470 7_4:-62733688 None:intergenic
AAAGCCCGTCGCTACAAGGA+GGG 0.625211 7_4:+62733203 Msa1169690:intron
AGCTTCCAAGATAAATCCAA+TGG 0.625508 7_4:+62734791 Msa1169690:CDS
ATGTAAGTTACCTTGTTGCG+AGG 0.626684 7_4:-62732476 None:intergenic
TCCTCAGTGCGCACTCCACG+TGG 0.629069 7_4:+62734314 Msa1169690:CDS
TATCATAAGCGAAAAGGACA+AGG 0.631796 7_4:+62733317 Msa1169690:CDS
CGTCTAGCTCTGGGATTCTG+GGG 0.633762 7_4:+62732317 Msa1169690:CDS
TCAGTGCGCACTCCACGTGG+TGG 0.638649 7_4:+62734317 Msa1169690:CDS
CCAGTCACTAACAGAACTAG+CGG 0.641140 7_4:-62733793 None:intergenic
TGGCATGGTTCCTCGCAACA+AGG 0.641625 7_4:+62732466 Msa1169690:CDS
GGAGCAGGAAGTTCAAGTGA+AGG 0.642645 7_4:+62734383 Msa1169690:CDS
TGTGGTTGCGCTCCACCACG+TGG 0.647882 7_4:-62734329 None:intergenic
TCTCACGGCTTGCTAAAACA+TGG 0.649356 7_4:+62734362 Msa1169690:CDS
TATCATGATAGACACTGTCC+TGG 0.654242 7_4:-62734664 None:intergenic
TTGATATGGCAACTTCAGCA+AGG 0.657298 7_4:+62734915 Msa1169690:CDS
GTTGCCATATCAATGCTGGT+AGG 0.660587 7_4:-62734905 None:intergenic
ACTGAAAGTGTTGATTTGGA+GGG 0.665976 7_4:+62732214 Msa1169690:CDS
AGTCACTAACAGAACTAGCG+GGG 0.666195 7_4:-62733791 None:intergenic
AAGGCAAAACACATAAATGG+TGG 0.672855 7_4:+62733336 Msa1169690:CDS
AAAAGCCCGTCGCTACAAGG+AGG 0.677449 7_4:+62733202 Msa1169690:intron
AAGACTCAGGAAAAGATCAA+CGG 0.677530 7_4:+62734737 Msa1169690:CDS
CCGTGAGACACAGAAGAGTG+TGG 0.683825 7_4:-62734347 None:intergenic
TTGAGAAGGAAACATTACCA+AGG 0.691255 7_4:+62732122 Msa1169690:CDS
GTCACTAACAGAACTAGCGG+GGG 0.703043 7_4:-62733790 None:intergenic
TATGGAGTTATCGAATCACA+AGG 0.703342 7_4:+62734814 Msa1169690:CDS
AGGGGTGACACATTGATACG+GGG 0.749012 7_4:-62734885 None:intergenic
ACCACGTGGAGTGCGCACTG+AGG 0.755457 7_4:-62734315 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGTTTGAAAAAATATAT+TGG - chr7_4:62731477-62731496 None:intergenic 10.0%
!! AAAAAAAGAAATGAAAAATT+AGG - chr7_4:62731747-62731766 None:intergenic 10.0%
!!! TTTTTCAATTTCTTAAAAAT+AGG + chr7_4:62731996-62732015 Msa1169690:intron 10.0%
!!! TCTTCAAATTTTTTTGAATT+CGG - chr7_4:62731833-62731852 None:intergenic 15.0%
!!! ATTTTTATCGTTTATCAAAA+TGG - chr7_4:62732900-62732919 None:intergenic 15.0%
!!! ATCGTAAATGAAATTTTAAG+TGG + chr7_4:62733131-62733150 Msa1169690:intron 20.0%
!!! AGTTAATTTGGATAATATTG+TGG - chr7_4:62733520-62733539 None:intergenic 20.0%
!! ATATGTGATTCTATTAACTA+TGG + chr7_4:62734244-62734263 Msa1169690:intron 20.0%
!! TAAAGAGATGAAGATTAAAT+TGG - chr7_4:62734283-62734302 None:intergenic 20.0%
!! AATGATTCATCAATATGATT+TGG - chr7_4:62734491-62734510 None:intergenic 20.0%
! TGTTTCAGAAATTTGAACTT+AGG - chr7_4:62731543-62731562 None:intergenic 25.0%
!! AAAAATGTGAACCTGAATTT+TGG - chr7_4:62731723-62731742 None:intergenic 25.0%
! AAGTTTCATTCAGATTCAAT+TGG - chr7_4:62731780-62731799 None:intergenic 25.0%
!!! TTCTATTGGTGTTAATGTTT+AGG + chr7_4:62732058-62732077 Msa1169690:intron 25.0%
!!! TCTATTGGTGTTAATGTTTA+GGG + chr7_4:62732059-62732078 Msa1169690:intron 25.0%
! GAGTTAACTAGTATAATTGA+AGG + chr7_4:62732097-62732116 Msa1169690:CDS 25.0%
! ATAATGCTTATTCAAAACTG+AGG + chr7_4:62732372-62732391 Msa1169690:intron 25.0%
! TAATGCTTATTCAAAACTGA+GGG + chr7_4:62732373-62732392 Msa1169690:intron 25.0%
! TATCAAAATGGAAAGCAATT+AGG - chr7_4:62732888-62732907 None:intergenic 25.0%
!!! TTTCCATTGATTTTAGATGA+AGG + chr7_4:62732935-62732954 Msa1169690:intron 25.0%
! TAAGTTAGTATAACTAGGAA+AGG - chr7_4:62733082-62733101 None:intergenic 25.0%
! AATCGTAAGTTAGTATAACT+AGG - chr7_4:62733087-62733106 None:intergenic 25.0%
!!! TTAATCCTCATTTTTGCATA+AGG + chr7_4:62733393-62733412 Msa1169690:intron 25.0%
! AAATTTACTACAACTCAGAA+AGG - chr7_4:62733423-62733442 None:intergenic 25.0%
! ATATTATCCAAATTAACTCC+TGG + chr7_4:62733522-62733541 Msa1169690:CDS 25.0%
! AGCAACTTATCTGATAATAT+TGG + chr7_4:62733594-62733613 Msa1169690:CDS 25.0%
! GTATAAATTCTCAGATTTCT+CGG + chr7_4:62733931-62733950 Msa1169690:CDS 25.0%
! AATTTGTATCATTATGACCT+TGG + chr7_4:62734175-62734194 Msa1169690:intron 25.0%
!!! TCTAGTTTTTTGTTTGCAAT+TGG - chr7_4:62734449-62734468 None:intergenic 25.0%
!!! TTGCTTAATTCTTGGTTTTT+AGG - chr7_4:62734854-62734873 None:intergenic 25.0%
! AAAAACCAAGAATTAAGCAA+AGG + chr7_4:62734854-62734873 Msa1169690:CDS 25.0%
!! AAAAGATTCATTTTGCAACA+TGG + chr7_4:62734952-62734971 Msa1169690:CDS 25.0%
! GAAGATTTAAATCCATGTAA+TGG + chr7_4:62735318-62735337 Msa1169690:three_prime_UTR 25.0%
TGGAAAGAAAAAATGTGACT+TGG - chr7_4:62731457-62731476 None:intergenic 30.0%
GGATTTCAAAGACAAACAAA+AGG - chr7_4:62731506-62731525 None:intergenic 30.0%
AAATTTGAACTTAGGAGTAG+CGG - chr7_4:62731535-62731554 None:intergenic 30.0%
TCTTTGACATCGTTGTTTAT+CGG - chr7_4:62731628-62731647 None:intergenic 30.0%
TGCTACAAAAATTGAACAGT+GGG + chr7_4:62731856-62731875 Msa1169690:CDS 30.0%
!! CTATTGGTGTTAATGTTTAG+GGG + chr7_4:62732060-62732079 Msa1169690:intron 30.0%
!! TATAATTGAAGGTGTTGAGA+AGG + chr7_4:62732108-62732127 Msa1169690:CDS 30.0%
ATCAACACTTTCAGTTTCAA+AGG - chr7_4:62732209-62732228 None:intergenic 30.0%
!! TGAAACTGAAAGTGTTGATT+TGG + chr7_4:62732210-62732229 Msa1169690:CDS 30.0%
ATCATGTTGTCGCAATAAAA+AGG - chr7_4:62732552-62732571 None:intergenic 30.0%
!!! TTACATCCCAAGTTTTGAAA+GGG - chr7_4:62732736-62732755 None:intergenic 30.0%
!!! ATTACATCCCAAGTTTTGAA+AGG - chr7_4:62732737-62732756 None:intergenic 30.0%
! AGAAGTGCAATATCAATTCT+AGG + chr7_4:62732815-62732834 Msa1169690:intron 30.0%
!! TGCAATATCAATTCTAGGAT+AGG + chr7_4:62732820-62732839 Msa1169690:intron 30.0%
! ATGCCTTCATCTAAAATCAA+TGG - chr7_4:62732941-62732960 None:intergenic 30.0%
TGTGGTATTTGTGTAAAAGT+AGG - chr7_4:62733029-62733048 None:intergenic 30.0%
! TACTTTTACACAAATACCAC+AGG + chr7_4:62733028-62733047 Msa1169690:CDS 30.0%
TTAAATTAGTTGCATACCTG+TGG - chr7_4:62733047-62733066 None:intergenic 30.0%
TTGGATAATATTGTGGACTT+AGG - chr7_4:62733513-62733532 None:intergenic 30.0%
ATTATCAGATAAGTTGCTAC+CGG - chr7_4:62733592-62733611 None:intergenic 30.0%
TTTCTTCTTGCGGAATTAAA+TGG - chr7_4:62733627-62733646 None:intergenic 30.0%
TCAAGAAACAAAACTGAATC+TGG + chr7_4:62733714-62733733 Msa1169690:CDS 30.0%
CAAGAAACAAAACTGAATCT+GGG + chr7_4:62733715-62733734 Msa1169690:CDS 30.0%
!!! GGAGTGATTTTAACTTAGAA+GGG + chr7_4:62733952-62733971 Msa1169690:CDS 30.0%
GAATTATCAGTCAAAGTGTA+AGG + chr7_4:62733994-62734013 Msa1169690:CDS 30.0%
!! CAAAGATTGGTTTCTTTGAT+GGG + chr7_4:62734084-62734103 Msa1169690:CDS 30.0%
!! AAAGATTGGTTTCTTTGATG+GGG + chr7_4:62734085-62734104 Msa1169690:CDS 30.0%
TATGTCAAACATAAAGAAGG+CGG - chr7_4:62734120-62734139 None:intergenic 30.0%
GACTATGTCAAACATAAAGA+AGG - chr7_4:62734123-62734142 None:intergenic 30.0%
ATAGAATCACATATTACACG+TGG - chr7_4:62734238-62734257 None:intergenic 30.0%
TAATCTTCATCTCTTTATGC+AGG + chr7_4:62734286-62734305 Msa1169690:intron 30.0%
! CATCAATATGATTTGGATGT+GGG - chr7_4:62734484-62734503 None:intergenic 30.0%
! TCATCAATATGATTTGGATG+TGG - chr7_4:62734485-62734504 None:intergenic 30.0%
ACAAACCTTTGCTTAATTCT+TGG - chr7_4:62734862-62734881 None:intergenic 30.0%
! AATGAATCTTTTGCTGCAAA+GGG - chr7_4:62734944-62734963 None:intergenic 30.0%
! AAATGAATCTTTTGCTGCAA+AGG - chr7_4:62734945-62734964 None:intergenic 30.0%
AGAACAAGTACTTAAAGACT+TGG - chr7_4:62735161-62735180 None:intergenic 30.0%
TCAAAATATCCGATGCTAAA+AGG - chr7_4:62735242-62735261 None:intergenic 30.0%
GAACAAGAAGAAAATGAACT+TGG + chr7_4:62735260-62735279 Msa1169690:three_prime_UTR 30.0%
GGCAAATAAATACCATTACA+TGG - chr7_4:62735333-62735352 None:intergenic 30.0%
! TTGGTGGTAATTGGAAGAAA+CGG - chr7_4:62731704-62731723 None:intergenic 35.0%
TCCAATTACCACCAAAATTC+AGG + chr7_4:62731709-62731728 Msa1169690:CDS 35.0%
!! ACCTGAATTTTGGTGGTAAT+TGG - chr7_4:62731713-62731732 None:intergenic 35.0%
! AATGTGAACCTGAATTTTGG+TGG - chr7_4:62731720-62731739 None:intergenic 35.0%
! CATTTTCAGAAAACGAAGCT+TGG + chr7_4:62731801-62731820 Msa1169690:intron 35.0%
CTGCTACAAAAATTGAACAG+TGG + chr7_4:62731855-62731874 Msa1169690:CDS 35.0%
! TTCTTTGTTTCAGATGTCTG+AGG - chr7_4:62731890-62731909 None:intergenic 35.0%
TCTTTCGCAGATTGAACTTA+GGG - chr7_4:62731919-62731938 None:intergenic 35.0%
!!! ACTGCTTTTTTCACTAATGC+TGG + chr7_4:62731953-62731972 Msa1169690:CDS 35.0%
! GTGTTAATGTTTAGGGGTTT+TGG + chr7_4:62732066-62732085 Msa1169690:intron 35.0%
TTGAGAAGGAAACATTACCA+AGG + chr7_4:62732122-62732141 Msa1169690:CDS 35.0%
AACATTACCAAGGATTGAAG+AGG + chr7_4:62732132-62732151 Msa1169690:CDS 35.0%
TATACATCCTCTTCAATCCT+TGG - chr7_4:62732142-62732161 None:intergenic 35.0%
!! AACTGAAAGTGTTGATTTGG+AGG + chr7_4:62732213-62732232 Msa1169690:CDS 35.0%
!! ACTGAAAGTGTTGATTTGGA+GGG + chr7_4:62732214-62732233 Msa1169690:CDS 35.0%
AAAAACTCACAGTCTCTAGT+TGG - chr7_4:62732346-62732365 None:intergenic 35.0%
!!! TCTTTTTTCAGCTGCTAGAA+AGG + chr7_4:62732442-62732461 Msa1169690:intron 35.0%
TATTTCTTACCGAGTGAGAT+TGG + chr7_4:62732572-62732591 Msa1169690:intron 35.0%
TCTATGTAACCAATCTCACT+CGG - chr7_4:62732584-62732603 None:intergenic 35.0%
CACTTAACAGTAGGATCATA+AGG - chr7_4:62732625-62732644 None:intergenic 35.0%
AGTAATCTTGAGAAGAGACA+GGG - chr7_4:62732652-62732671 None:intergenic 35.0%
AAGTAATCTTGAGAAGAGAC+AGG - chr7_4:62732653-62732672 None:intergenic 35.0%
TGTTTCCCCTTTCAAAACTT+GGG + chr7_4:62732727-62732746 Msa1169690:intron 35.0%
!!! TACATCCCAAGTTTTGAAAG+GGG - chr7_4:62732735-62732754 None:intergenic 35.0%
GTGGACATTGATATACATTC+AGG - chr7_4:62732779-62732798 None:intergenic 35.0%
TGATATTGCACTTCTGTGAT+GGG - chr7_4:62732810-62732829 None:intergenic 35.0%
TTGATATTGCACTTCTGTGA+TGG - chr7_4:62732811-62732830 None:intergenic 35.0%
!! ACACAATTTCAGCTTTAGAC+AGG - chr7_4:62732857-62732876 None:intergenic 35.0%
GAAATTGTGGAATTTGCACT+AGG - chr7_4:62733267-62733286 None:intergenic 35.0%
! TGCTCTTTTGGATGAAATTG+TGG - chr7_4:62733280-62733299 None:intergenic 35.0%
TCCACATATCATAAGCGAAA+AGG + chr7_4:62733311-62733330 Msa1169690:CDS 35.0%
! TCCTTTTCGCTTATGATATG+TGG - chr7_4:62733315-62733334 None:intergenic 35.0%
TATCATAAGCGAAAAGGACA+AGG + chr7_4:62733317-62733336 Msa1169690:CDS 35.0%
GACAAGGCAAAACACATAAA+TGG + chr7_4:62733333-62733352 Msa1169690:CDS 35.0%
AAGGCAAAACACATAAATGG+TGG + chr7_4:62733336-62733355 Msa1169690:CDS 35.0%
GCATTCCTTATGCAAAAATG+AGG - chr7_4:62733401-62733420 None:intergenic 35.0%
ATCTGTTATTGGAGGTTCAA+GGG + chr7_4:62733479-62733498 Msa1169690:CDS 35.0%
! TTGTCTTGGTTGATATTGAC+TGG - chr7_4:62733548-62733567 None:intergenic 35.0%
AGCAATAACGTTTCTTCTTG+CGG - chr7_4:62733637-62733656 None:intergenic 35.0%
GAACTATCACACATGTGTTT+AGG - chr7_4:62733849-62733868 None:intergenic 35.0%
AACACATGTGTGATAGTTCA+AGG + chr7_4:62733850-62733869 Msa1169690:CDS 35.0%
TGATAGTAACTCTAGCAGAA+AGG + chr7_4:62733881-62733900 Msa1169690:CDS 35.0%
!!! CGGAGTGATTTTAACTTAGA+AGG + chr7_4:62733951-62733970 Msa1169690:CDS 35.0%
!!! TGATTTTAACTTAGAAGGGC+AGG + chr7_4:62733956-62733975 Msa1169690:CDS 35.0%
CCATCAAAGAAACCAATCTT+TGG - chr7_4:62734086-62734105 None:intergenic 35.0%
!! CCAAAGATTGGTTTCTTTGA+TGG + chr7_4:62734083-62734102 Msa1169690:CDS 35.0%
GAAAAACCAATACATGGCTA+TGG - chr7_4:62734216-62734235 None:intergenic 35.0%
GATTGTTTGATCGAACAAGT+TGG + chr7_4:62734695-62734714 Msa1169690:CDS 35.0%
GAACATAAATTCCAAGACTC+AGG + chr7_4:62734724-62734743 Msa1169690:CDS 35.0%
AAGACTCAGGAAAAGATCAA+CGG + chr7_4:62734737-62734756 Msa1169690:CDS 35.0%
AGCTTCCAAGATAAATCCAA+TGG + chr7_4:62734791-62734810 Msa1169690:CDS 35.0%
CCATACCATTGGATTTATCT+TGG - chr7_4:62734799-62734818 None:intergenic 35.0%
CCAAGATAAATCCAATGGTA+TGG + chr7_4:62734796-62734815 Msa1169690:CDS 35.0%
ATTCGATAACTCCATACCAT+TGG - chr7_4:62734810-62734829 None:intergenic 35.0%
TATGGAGTTATCGAATCACA+AGG + chr7_4:62734814-62734833 Msa1169690:CDS 35.0%
!!! GATTTTATCTCTGAAGTTGC+TGG - chr7_4:62734998-62735017 None:intergenic 35.0%
! AATGTGACTTGGCGAATAGA+TGG - chr7_4:62731446-62731465 None:intergenic 40.0%
TGGTGGTAATTGGAAGAAAC+GGG - chr7_4:62731703-62731722 None:intergenic 40.0%
CTCTTTCGCAGATTGAACTT+AGG - chr7_4:62731920-62731939 None:intergenic 40.0%
ATCTGCGAAAGAGTTTAGCT+TGG + chr7_4:62731927-62731946 Msa1169690:CDS 40.0%
! TCTGCGAAAGAGTTTAGCTT+GGG + chr7_4:62731928-62731947 Msa1169690:CDS 40.0%
TGTGAATCCATTTCGACCTT+AGG + chr7_4:62732169-62732188 Msa1169690:CDS 40.0%
GTGAATCCATTTCGACCTTA+GGG + chr7_4:62732170-62732189 Msa1169690:CDS 40.0%
!! TTTGGAGGGTGATTTGTTTG+AGG + chr7_4:62732228-62732247 Msa1169690:CDS 40.0%
CAGCTGAAAAAAGAGAGTCA+AGG - chr7_4:62732436-62732455 None:intergenic 40.0%
! TTTTCAGCTGCTAGAAAGGT+TGG + chr7_4:62732446-62732465 Msa1169690:intron 40.0%
ATGTAAGTTACCTTGTTGCG+AGG - chr7_4:62732479-62732498 None:intergenic 40.0%
CAGGGTTAACACTTAACAGT+AGG - chr7_4:62732634-62732653 None:intergenic 40.0%
CTGTTTCCCCTTTCAAAACT+TGG + chr7_4:62732726-62732745 Msa1169690:intron 40.0%
TTGGGATGTAATTCCACCTT+TGG + chr7_4:62732745-62732764 Msa1169690:intron 40.0%
CATTCAGGTCAAAGATCCAA+AGG - chr7_4:62732764-62732783 None:intergenic 40.0%
GATATTGCACTTCTGTGATG+GGG - chr7_4:62732809-62732828 None:intergenic 40.0%
ATCTATTTCAAAGCCGTCGA+AGG + chr7_4:62733230-62733249 Msa1169690:CDS 40.0%
! GAATTTGCACTAGGCTTTGT+TGG - chr7_4:62733258-62733277 None:intergenic 40.0%
! AACACTAAGCGATGCTCTTT+TGG - chr7_4:62733292-62733311 None:intergenic 40.0%
ATGGTGGTTAGTACTTGCAT+TGG + chr7_4:62733352-62733371 Msa1169690:intron 40.0%
!! GTGTCAAGAGCATCTGTTAT+TGG + chr7_4:62733468-62733487 Msa1169690:CDS 40.0%
!! TCAAGAGCATCTGTTATTGG+AGG + chr7_4:62733471-62733490 Msa1169690:CDS 40.0%
CATCTGTTATTGGAGGTTCA+AGG + chr7_4:62733478-62733497 Msa1169690:CDS 40.0%
TCTGTTATTGGAGGTTCAAG+GGG + chr7_4:62733480-62733499 Msa1169690:CDS 40.0%
!!! GGAAGTTGCTGATTTTGTCT+TGG - chr7_4:62733562-62733581 None:intergenic 40.0%
TCAGCAACTTCCAAATCTTC+CGG + chr7_4:62733570-62733589 Msa1169690:CDS 40.0%
TAAGTTGCTACCGGAAGATT+TGG - chr7_4:62733583-62733602 None:intergenic 40.0%
GCAAGAAGAAACGTTATTGC+TGG + chr7_4:62733636-62733655 Msa1169690:CDS 40.0%
GCTAGAGTTACTATCAATGC+TGG - chr7_4:62733877-62733896 None:intergenic 40.0%
TCAGACACTAATGCAGATCA+AGG + chr7_4:62733909-62733928 Msa1169690:CDS 40.0%
!!! TTTTAACTTAGAAGGGCAGG+AGG + chr7_4:62733959-62733978 Msa1169690:CDS 40.0%
AAGAAACCAATCTTTGGCGA+AGG - chr7_4:62734080-62734099 None:intergenic 40.0%
AATACATGGCTATGGCTTTC+AGG - chr7_4:62734208-62734227 None:intergenic 40.0%
TGAAAGCCATAGCCATGTAT+TGG + chr7_4:62734207-62734226 Msa1169690:intron 40.0%
CACGTGGAAAAACCAATACA+TGG - chr7_4:62734222-62734241 None:intergenic 40.0%
CTTGCAGCTTTGCTTTGATT+TGG - chr7_4:62734409-62734428 None:intergenic 40.0%
TACATCACTGTCGCATGAAA+TGG + chr7_4:62734598-62734617 Msa1169690:CDS 40.0%
TATCATGATAGACACTGTCC+TGG - chr7_4:62734667-62734686 None:intergenic 40.0%
! GTTGATCTTTTCCTGAGTCT+TGG - chr7_4:62734738-62734757 None:intergenic 40.0%
TTGCCATATCAATGCTGGTA+GGG - chr7_4:62734907-62734926 None:intergenic 40.0%
TGAAGTTGCCATATCAATGC+TGG - chr7_4:62734912-62734931 None:intergenic 40.0%
TTGATATGGCAACTTCAGCA+AGG + chr7_4:62734915-62734934 Msa1169690:CDS 40.0%
TTTGTAATGCTTTCCAGCAC+AGG - chr7_4:62735031-62735050 None:intergenic 40.0%
!!! TGAGCAGTCTCTTTTTTCCT+TGG + chr7_4:62735200-62735219 Msa1169690:three_prime_UTR 40.0%
!!! GAGCAGTCTCTTTTTTCCTT+GGG + chr7_4:62735201-62735220 Msa1169690:three_prime_UTR 40.0%
! GCCATGAATCCTTTTAGCAT+CGG + chr7_4:62735230-62735249 Msa1169690:three_prime_UTR 40.0%
TCCGATGCTAAAAGGATTCA+TGG - chr7_4:62735234-62735253 None:intergenic 40.0%
GGCGAAAGTGATGTGAAGAA+GGG - chr7_4:62731577-62731596 None:intergenic 45.0%
CTTCTTCACATCACTTTCGC+CGG + chr7_4:62731576-62731595 Msa1169690:five_prime_UTR 45.0%
! GTTGTTTATCGGAGAAGCGT+CGG - chr7_4:62731617-62731636 None:intergenic 45.0%
GGGATCGAGAAGAGAATCAT+CGG - chr7_4:62731683-62731702 None:intergenic 45.0%
!!! TTTAGGGGTTTTGGATGCTG+AGG + chr7_4:62732075-62732094 Msa1169690:intron 45.0%
GGTTAAACTATCGCTCCCTA+AGG - chr7_4:62732188-62732207 None:intergenic 45.0%
! GGTAGCTGCACTAGCAATTT+TGG - chr7_4:62732290-62732309 None:intergenic 45.0%
TCAGGTCAAAGATCCAAAGG+TGG - chr7_4:62732761-62732780 None:intergenic 45.0%
! TCTGTGATGGGGTTACTTTG+TGG - chr7_4:62732798-62732817 None:intergenic 45.0%
!! CAGCTTTAGACAGGACAACA+TGG - chr7_4:62732848-62732867 None:intergenic 45.0%
TATTGGAGGTTCAAGGGGTA+CGG + chr7_4:62733485-62733504 Msa1169690:CDS 45.0%
! TGACTGGCCAGGAGTTAATT+TGG - chr7_4:62733532-62733551 None:intergenic 45.0%
! TTGGTTGATATTGACTGGCC+AGG - chr7_4:62733543-62733562 None:intergenic 45.0%
AGTCACTAACAGAACTAGCG+GGG - chr7_4:62733794-62733813 None:intergenic 45.0%
CAGTCACTAACAGAACTAGC+GGG - chr7_4:62733795-62733814 None:intergenic 45.0%
CCAGTCACTAACAGAACTAG+CGG - chr7_4:62733796-62733815 None:intergenic 45.0%
!! TGTTAGTGACTGGTCTTCAG+AGG + chr7_4:62733803-62733822 Msa1169690:CDS 45.0%
AAGTGTAAGGACTGCTTCTG+TGG + chr7_4:62734007-62734026 Msa1169690:CDS 45.0%
!! TCTCACGGCTTGCTAAAACA+TGG + chr7_4:62734362-62734381 Msa1169690:CDS 45.0%
! GATTTGGATGTGGGTTTTGC+TGG - chr7_4:62734475-62734494 None:intergenic 45.0%
TAGGGGTGACACATTGATAC+GGG - chr7_4:62734889-62734908 None:intergenic 45.0%
GTAGGGGTGACACATTGATA+CGG - chr7_4:62734890-62734909 None:intergenic 45.0%
TGCCATATCAATGCTGGTAG+GGG - chr7_4:62734906-62734925 None:intergenic 45.0%
GTTGCCATATCAATGCTGGT+AGG - chr7_4:62734908-62734927 None:intergenic 45.0%
ATCAACCAACTTACCTGTGC+TGG + chr7_4:62735015-62735034 Msa1169690:CDS 45.0%
GATTCATGGCAATGAACCCA+AGG - chr7_4:62735220-62735239 None:intergenic 45.0%
!!! TTTATTTATTTATTTTCTAT+TGG + chr7_4:62732044-62732063 Msa1169690:intron 5.0%
ACTTAGGAGTAGCGGCTAGT+GGG - chr7_4:62731527-62731546 None:intergenic 50.0%
AACTTAGGAGTAGCGGCTAG+TGG - chr7_4:62731528-62731547 None:intergenic 50.0%
CGGCGAAAGTGATGTGAAGA+AGG - chr7_4:62731578-62731597 None:intergenic 50.0%
ATCGCTCCCTAAGGTCGAAA+TGG - chr7_4:62732179-62732198 None:intergenic 50.0%
! ACCAGAATGTCGTCTAGCTC+TGG + chr7_4:62732307-62732326 Msa1169690:CDS 50.0%
!! CCAGAATGTCGTCTAGCTCT+GGG + chr7_4:62732308-62732327 Msa1169690:CDS 50.0%
!! TCGTCTAGCTCTGGGATTCT+GGG + chr7_4:62732316-62732335 Msa1169690:CDS 50.0%
AGCTGCTAGAAAGGTTGGCA+TGG + chr7_4:62732451-62732470 Msa1169690:intron 50.0%
!! TGAAGGCATCACCTGCTTCA+AGG + chr7_4:62732952-62732971 Msa1169690:CDS 50.0%
GCTGGTAGATTCCTTGAAGC+AGG - chr7_4:62732966-62732985 None:intergenic 50.0%
CCAGCTGTTGCGAGAGTAAT+CGG + chr7_4:62732981-62733000 Msa1169690:CDS 50.0%
CAGCTGTTGCGAGAGTAATC+GGG + chr7_4:62732982-62733001 Msa1169690:CDS 50.0%
TGAAAAAGCCCGTCGCTACA+AGG + chr7_4:62733199-62733218 Msa1169690:intron 50.0%
TTTCTTGAAGCGAAGCCCGA+TGG - chr7_4:62733702-62733721 None:intergenic 50.0%
GTCACTAACAGAACTAGCGG+GGG - chr7_4:62733793-62733812 None:intergenic 50.0%
!! CCGCTAGTTCTGTTAGTGAC+TGG + chr7_4:62733793-62733812 Msa1169690:CDS 50.0%
! TGAAGGTTTTGCAGGAGCTG+GGG - chr7_4:62734045-62734064 None:intergenic 50.0%
! CTGAAGGTTTTGCAGGAGCT+GGG - chr7_4:62734046-62734065 None:intergenic 50.0%
CCACACTCTTCTGTGTCTCA+CGG + chr7_4:62734347-62734366 Msa1169690:CDS 50.0%
!! GGCTTGCTAAAACATGGAGC+AGG + chr7_4:62734368-62734387 Msa1169690:CDS 50.0%
GGAGCAGGAAGTTCAAGTGA+AGG + chr7_4:62734383-62734402 Msa1169690:CDS 50.0%
AGGGGTGACACATTGATACG+GGG - chr7_4:62734888-62734907 None:intergenic 50.0%
!! CACCCCTACCAGCATTGATA+TGG + chr7_4:62734901-62734920 Msa1169690:CDS 50.0%
GCTTTCCAGCACAGGTAAGT+TGG - chr7_4:62735023-62735042 None:intergenic 50.0%
TCGGAGTCGGAAATCATCGC+CGG - chr7_4:62731598-62731617 None:intergenic 55.0%
!! TATCGGAGAAGCGTCGGAGT+CGG - chr7_4:62731611-62731630 None:intergenic 55.0%
CCCAGAGCTAGACGACATTC+TGG - chr7_4:62732311-62732330 None:intergenic 55.0%
!! GTCGTCTAGCTCTGGGATTC+TGG + chr7_4:62732315-62732334 Msa1169690:CDS 55.0%
!! CGTCTAGCTCTGGGATTCTG+GGG + chr7_4:62732317-62732336 Msa1169690:CDS 55.0%
TGGCATGGTTCCTCGCAACA+AGG + chr7_4:62732466-62732485 Msa1169690:CDS 55.0%
TGCTAGATGTGCCACCCCAA+TGG + chr7_4:62732682-62732701 Msa1169690:intron 55.0%
GCTAGATGTGCCACCCCAAT+GGG + chr7_4:62732683-62732702 Msa1169690:intron 55.0%
CCAGTTGAACCAGCCCATTG+GGG - chr7_4:62732699-62732718 None:intergenic 55.0%
CCCAGTTGAACCAGCCCATT+GGG - chr7_4:62732700-62732719 None:intergenic 55.0%
!! CCCAATGGGCTGGTTCAACT+GGG + chr7_4:62732697-62732716 Msa1169690:intron 55.0%
!! CCAATGGGCTGGTTCAACTG+GGG + chr7_4:62732698-62732717 Msa1169690:intron 55.0%
CCGATTACTCTCGCAACAGC+TGG - chr7_4:62732984-62733003 None:intergenic 55.0%
AAAAGCCCGTCGCTACAAGG+AGG + chr7_4:62733202-62733221 Msa1169690:intron 55.0%
AAAGCCCGTCGCTACAAGGA+GGG + chr7_4:62733203-62733222 Msa1169690:intron 55.0%
TGACTCCCTCCTTGTAGCGA+CGG - chr7_4:62733211-62733230 None:intergenic 55.0%
!! GGCTTTGTTGGCACCTTCGA+CGG - chr7_4:62733246-62733265 None:intergenic 55.0%
! GAAGGTTTTGCAGGAGCTGG+GGG - chr7_4:62734044-62734063 None:intergenic 55.0%
! CCTGAAGGTTTTGCAGGAGC+TGG - chr7_4:62734047-62734066 None:intergenic 55.0%
CCAGCTCCTGCAAAACCTTC+AGG + chr7_4:62734044-62734063 Msa1169690:CDS 55.0%
CGACTGCCTTCGCCAAAGAT+TGG + chr7_4:62734071-62734090 Msa1169690:CDS 55.0%
! GGCTTTCAGGTGTGTCACCA+AGG - chr7_4:62734195-62734214 None:intergenic 55.0%
CCGTGAGACACAGAAGAGTG+TGG - chr7_4:62734350-62734369 None:intergenic 55.0%
ACTGTCCTGGTGATCGACAC+GGG - chr7_4:62734654-62734673 None:intergenic 55.0%
CACTGTCCTGGTGATCGACA+CGG - chr7_4:62734655-62734674 None:intergenic 55.0%
GTTGAACCAGCCCATTGGGG+TGG - chr7_4:62732696-62732715 None:intergenic 60.0%
!! CCCCAATGGGCTGGTTCAAC+TGG + chr7_4:62732696-62732715 Msa1169690:intron 60.0%
CCCCAGTTGAACCAGCCCAT+TGG - chr7_4:62732701-62732720 None:intergenic 60.0%
!! GGGCTGGTTCAACTGGGGAT+AGG + chr7_4:62732703-62732722 Msa1169690:intron 60.0%
GACTCCCTCCTTGTAGCGAC+GGG - chr7_4:62733210-62733229 None:intergenic 60.0%
AAGCCCGATGGTGTTCTGGC+GGG - chr7_4:62733690-62733709 None:intergenic 60.0%
GAAGCCCGATGGTGTTCTGG+CGG - chr7_4:62733691-62733710 None:intergenic 60.0%
AGCGAAGCCCGATGGTGTTC+TGG - chr7_4:62733694-62733713 None:intergenic 60.0%
GGGCAGGAGGCTCAGCAAAA+TGG + chr7_4:62733972-62733991 Msa1169690:CDS 60.0%
! CGCAGGCCTGAAGGTTTTGC+AGG - chr7_4:62734053-62734072 None:intergenic 60.0%
TCTTTGGCGAAGGCAGTCGC+AGG - chr7_4:62734070-62734089 None:intergenic 60.0%
TGGTGATCGACACGGGTCAG+TGG - chr7_4:62734647-62734666 None:intergenic 60.0%
! ACTGACCCGTGTCGATCACC+AGG + chr7_4:62734646-62734665 Msa1169690:CDS 60.0%
GATGTGCCACCCCAATGGGC+TGG + chr7_4:62732687-62732706 Msa1169690:intron 65.0%
CCGATGGTGTTCTGGCGGGA+GGG - chr7_4:62733686-62733705 None:intergenic 65.0%
CCCTCCCGCCAGAACACCAT+CGG + chr7_4:62733683-62733702 Msa1169690:CDS 65.0%
CCTCCCGCCAGAACACCATC+GGG + chr7_4:62733684-62733703 Msa1169690:CDS 65.0%
GAAGGCAGTCGCAGGCCTGA+AGG - chr7_4:62734062-62734081 None:intergenic 65.0%
TCCTCAGTGCGCACTCCACG+TGG + chr7_4:62734314-62734333 Msa1169690:CDS 65.0%
ACCACGTGGAGTGCGCACTG+AGG - chr7_4:62734318-62734337 None:intergenic 65.0%
TCAGTGCGCACTCCACGTGG+TGG + chr7_4:62734317-62734336 Msa1169690:CDS 65.0%
TGTGGTTGCGCTCCACCACG+TGG - chr7_4:62734332-62734351 None:intergenic 65.0%
CTGGCGGGAGGGCGAGATGA+GGG - chr7_4:62733675-62733694 None:intergenic 70.0%
TCTGGCGGGAGGGCGAGATG+AGG - chr7_4:62733676-62733695 None:intergenic 70.0%
CCCGATGGTGTTCTGGCGGG+AGG - chr7_4:62733687-62733706 None:intergenic 70.0%
GCGGGAGGGCGAGATGAGGG+AGG - chr7_4:62733672-62733691 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 62731434 62735353 62731434 ID=Msa1169690;Name=Msa1169690
chr7_4 mRNA 62731434 62735353 62731434 ID=Msa1169690-mRNA-1;Parent=Msa1169690;Name=Msa1169690-mRNA-1;_AED=0.04;_eAED=0.04;_QI=167|1|1|1|1|1|8|290|754
chr7_4 exon 62731434 62731730 62731434 ID=Msa1169690-mRNA-1:exon:19908;Parent=Msa1169690-mRNA-1
chr7_4 exon 62731810 62731974 62731810 ID=Msa1169690-mRNA-1:exon:19909;Parent=Msa1169690-mRNA-1
chr7_4 exon 62732080 62732355 62732080 ID=Msa1169690-mRNA-1:exon:19910;Parent=Msa1169690-mRNA-1
chr7_4 exon 62732453 62732487 62732453 ID=Msa1169690-mRNA-1:exon:19911;Parent=Msa1169690-mRNA-1
chr7_4 exon 62732951 62733049 62732951 ID=Msa1169690-mRNA-1:exon:19912;Parent=Msa1169690-mRNA-1
chr7_4 exon 62733207 62733357 62733207 ID=Msa1169690-mRNA-1:exon:19913;Parent=Msa1169690-mRNA-1
chr7_4 exon 62733454 62734106 62733454 ID=Msa1169690-mRNA-1:exon:19914;Parent=Msa1169690-mRNA-1
chr7_4 exon 62734308 62735353 62734308 ID=Msa1169690-mRNA-1:exon:19915;Parent=Msa1169690-mRNA-1
chr7_4 five_prime_UTR 62731434 62731600 62731434 ID=Msa1169690-mRNA-1:five_prime_utr;Parent=Msa1169690-mRNA-1
chr7_4 CDS 62731601 62731730 62731601 ID=Msa1169690-mRNA-1:cds;Parent=Msa1169690-mRNA-1
chr7_4 CDS 62731810 62731974 62731810 ID=Msa1169690-mRNA-1:cds;Parent=Msa1169690-mRNA-1
chr7_4 CDS 62732080 62732355 62732080 ID=Msa1169690-mRNA-1:cds;Parent=Msa1169690-mRNA-1
chr7_4 CDS 62732453 62732487 62732453 ID=Msa1169690-mRNA-1:cds;Parent=Msa1169690-mRNA-1
chr7_4 CDS 62732951 62733049 62732951 ID=Msa1169690-mRNA-1:cds;Parent=Msa1169690-mRNA-1
chr7_4 CDS 62733207 62733357 62733207 ID=Msa1169690-mRNA-1:cds;Parent=Msa1169690-mRNA-1
chr7_4 CDS 62733454 62734106 62733454 ID=Msa1169690-mRNA-1:cds;Parent=Msa1169690-mRNA-1
chr7_4 CDS 62734308 62735063 62734308 ID=Msa1169690-mRNA-1:cds;Parent=Msa1169690-mRNA-1
chr7_4 three_prime_UTR 62735064 62735353 62735064 ID=Msa1169690-mRNA-1:three_prime_utr;Parent=Msa1169690-mRNA-1
Gene Sequence

>Msa1169690

ATGATTTCCGACTCCGACGCTTCTCCGATAAACAACGATGTCAAAGATCGACGTCTCAGCATCATCGACTTTCTCTCTGCCGATGATTCTCTTCTCGATCCCGTTTCTTCCAATTACCACCAAAATTCAGAAAACGAAGCTTGGTACACTCCGAATTCAAAAAAATTTGAAGATGCTGCTACAAAAATTGAACAGTGGGAAAACGAACCTCAGACATCTGAAACAAAGAAGAAAAACCCTAAGTTCAATCTGCGAAAGAGTTTAGCTTGGGACACTGCTTTTTTCACTAATGCTGGGGTTTTGGATGCTGAGGAGTTAACTAGTATAATTGAAGGTGTTGAGAAGGAAACATTACCAAGGATTGAAGAGGATGTATACAAATCATGTGAATCCATTTCGACCTTAGGGAGCGATAGTTTAACCTTTGAAACTGAAAGTGTTGATTTGGAGGGTGATTTGTTTGAGGATGTTCGAGCTTCGATTCAGAAATCTAGCAATAAGTCCAAAATTGCTAGTGCAGCTACCAGAATGTCGTCTAGCTCTGGGATTCTGGGGTTGCCAACTAGAGACTCTGCTAGAAAGGTTGGCATGGTTCCTCGCAACAAGATGAAGGCATCACCTGCTTCAAGGAATCTACCAGCTGTTGCGAGAGTAATCGGGAAGACGACAAACAAGAATAATCCTACTTTTACACAAATACCACAGCCCGTCGCTACAAGGAGGGAGTCATCTATTTCAAAGCCGTCGAAGGTGCCAACAAAGCCTAGTGCAAATTCCACAATTTCATCCAAAAGAGCATCGCTTAGTGTTCCACATATCATAAGCGAAAAGGACAAGGCAAAACACATAAATGGTGATAGAGTCAGTTTAGTGTCAAGAGCATCTGTTATTGGAGGTTCAAGGGGTACGGAGCCTAAGTCCACAATATTATCCAAATTAACTCCTGGCCAGTCAATATCAACCAAGACAAAATCAGCAACTTCCAAATCTTCCGGTAGCAACTTATCTGATAATATTGGTAAATCTCCATTTAATTCCGCAAGAAGAAACGTTATTGCTGGAACTTCAAAGCCTCCCTCATCTCGCCCTCCCGCCAGAACACCATCGGGCTTCGCTTCAAGAAACAAAACTGAATCTGGGAATTCTAGTCTCTCAAGCTTGATTTCTGCTAACAAACTTTCTTCTAGTATTTCCCCCGCTAGTTCTGTTAGTGACTGGTCTTCAGAGGCATCTGTATCAACTTCTATGCCTAAACACATGTGTGATAGTTCAAGGTCCAGCATTGATAGTAACTCTAGCAGAAAGGTTTTATCAGACACTAATGCAGATCAAGGTATAAATTCTCAGATTTCTCGGAGTGATTTTAACTTAGAAGGGCAGGAGGCTCAGCAAAATGGAATTATCAGTCAAAGTGTAAGGACTGCTTCTGTGGCAGCAGTTAATCCCCCAGCTCCTGCAAAACCTTCAGGCCTGCGACTGCCTTCGCCAAAGATTGGTTTCTTTGATGGGGCGAAATCCTCAGTGCGCACTCCACGTGGTGGAGCGCAACCACACTCTTCTGTGTCTCACGGCTTGCTAAAACATGGAGCAGGAAGTTCAAGTGAAGGCCAAATCAAAGCAAAGCTGCAAGCAGTGAGATGTATCAAGCCAATTGCAAACAAAAAACTAGATAACCAGCAAAACCCACATCCAAATCATATTGATGAATCATTAGATGTTGCAAATAAGACATCTAGTGCAGAGCAGAACGTCAAAAGCTCTTCTGAAATGCTGAAGTGTGCTGTTAAAAATGTTGAATATACATCACTGTCGCATGAAATGGAGAGAACTAATTATGATTTGCGTCCACTGACCCGTGTCGATCACCAGGACAGTGTCTATCATGATAATCAAGTTGATTGTTTGATCGAACAAGTTGGACTTATGAACATAAATTCCAAGACTCAGGAAAAGATCAACGGTGATTCTCTTTCTTTTTGTAAGACTGATATCAGCTTCCAAGATAAATCCAATGGTATGGAGTTATCGAATCACAAGGAGCTTTTTGATTATCCTAAAAACCAAGAATTAAGCAAAGGTTTGTCTACCCCGTATCAATGTGTCACCCCTACCAGCATTGATATGGCAACTTCAGCAAGGATACCCTTTGCAGCAAAAGATTCATTTTGCAACATGGATTGTACTGTTTTGACAGAACCAGCAACTTCAGAGATAAAATCAACCAACTTACCTGTGCTGGAAAGCATTACAAAAGAAAACAACTGA

Protein sequence

>Msa1169690

MISDSDASPINNDVKDRRLSIIDFLSADDSLLDPVSSNYHQNSENEAWYTPNSKKFEDAATKIEQWENEPQTSETKKKNPKFNLRKSLAWDTAFFTNAGVLDAEELTSIIEGVEKETLPRIEEDVYKSCESISTLGSDSLTFETESVDLEGDLFEDVRASIQKSSNKSKIASAATRMSSSSGILGLPTRDSARKVGMVPRNKMKASPASRNLPAVARVIGKTTNKNNPTFTQIPQPVATRRESSISKPSKVPTKPSANSTISSKRASLSVPHIISEKDKAKHINGDRVSLVSRASVIGGSRGTEPKSTILSKLTPGQSISTKTKSATSKSSGSNLSDNIGKSPFNSARRNVIAGTSKPPSSRPPARTPSGFASRNKTESGNSSLSSLISANKLSSSISPASSVSDWSSEASVSTSMPKHMCDSSRSSIDSNSSRKVLSDTNADQGINSQISRSDFNLEGQEAQQNGIISQSVRTASVAAVNPPAPAKPSGLRLPSPKIGFFDGAKSSVRTPRGGAQPHSSVSHGLLKHGAGSSSEGQIKAKLQAVRCIKPIANKKLDNQQNPHPNHIDESLDVANKTSSAEQNVKSSSEMLKCAVKNVEYTSLSHEMERTNYDLRPLTRVDHQDSVYHDNQVDCLIEQVGLMNINSKTQEKINGDSLSFCKTDISFQDKSNGMELSNHKELFDYPKNQELSKGLSTPYQCVTPTSIDMATSARIPFAAKDSFCNMDCTVLTEPATSEIKSTNLPVLESITKENN*