Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0913140 | XP_003619105.1 | 87.732 | 269 | 17 | 2 | 1 | 269 | 1 | 253 | 4.05e-162 | 460 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0913140 | 0.832113 | 1.137516e-55 | -8.615850e-47 |
| Msa0009530 | Msa0913140 | 0.829682 | 4.489859e-55 | -8.615850e-47 |
| Msa0009560 | Msa0913140 | 0.817641 | 2.967912e-52 | -8.615850e-47 |
| Msa0012380 | Msa0913140 | 0.840614 | 7.821661e-58 | -8.615850e-47 |
| Msa0024500 | Msa0913140 | 0.801557 | 8.513399e-49 | -8.615850e-47 |
| Msa0027030 | Msa0913140 | 0.804427 | 2.171865e-49 | -8.615850e-47 |
| Msa0034100 | Msa0913140 | 0.801324 | 9.502598e-49 | -8.615850e-47 |
| Msa0037180 | Msa0913140 | -0.833695 | 4.601364e-56 | -8.615850e-47 |
| Msa0037270 | Msa0913140 | 0.836661 | 8.212729e-57 | -8.615850e-47 |
| Msa0044780 | Msa0913140 | 0.834708 | 2.563966e-56 | -8.615850e-47 |
| Msa0045810 | Msa0913140 | -0.809577 | 1.766327e-50 | -8.615850e-47 |
| Msa0046050 | Msa0913140 | 0.806526 | 7.881819e-50 | -8.615850e-47 |
| Msa0046200 | Msa0913140 | -0.813700 | 2.241787e-51 | -8.615850e-47 |
| Msa0046970 | Msa0913140 | -0.810376 | 1.188733e-50 | -8.615850e-47 |
| Msa0072390 | Msa0913140 | 0.848526 | 5.793492e-60 | -8.615850e-47 |
| Msa0081120 | Msa0913140 | 0.857258 | 1.844834e-62 | -8.615850e-47 |
| Msa0091090 | Msa0913140 | 0.825818 | 3.809674e-54 | -8.615850e-47 |
| Msa0092220 | Msa0913140 | -0.831310 | 1.794664e-55 | -8.615850e-47 |
| Msa0105590 | Msa0913140 | 0.812377 | 4.372270e-51 | -8.615850e-47 |
| Msa0120320 | Msa0913140 | 0.828946 | 6.776201e-55 | -8.615850e-47 |
| Msa0604880 | Msa0913140 | 0.801280 | 9.700988e-49 | -8.615850e-47 |
| Msa0608780 | Msa0913140 | 0.851421 | 8.971371e-61 | -8.615850e-47 |
| Msa0608820 | Msa0913140 | -0.821410 | 4.098882e-53 | -8.615850e-47 |
| Msa0610700 | Msa0913140 | 0.865189 | 7.070530e-65 | -8.615850e-47 |
| Msa0610780 | Msa0913140 | 0.873566 | 1.331021e-67 | -8.615850e-47 |
| Msa0610810 | Msa0913140 | 0.857582 | 1.479542e-62 | -8.615850e-47 |
| Msa0619390 | Msa0913140 | 0.802152 | 6.425012e-49 | -8.615850e-47 |
| Msa0621670 | Msa0913140 | 0.825242 | 5.216674e-54 | -8.615850e-47 |
| Msa0624930 | Msa0913140 | -0.808400 | 3.155130e-50 | -8.615850e-47 |
| Msa0634260 | Msa0913140 | 0.818042 | 2.408929e-52 | -8.615850e-47 |
| Msa0646190 | Msa0913140 | 0.803888 | 2.811278e-49 | -8.615850e-47 |
| Msa0649250 | Msa0913140 | 0.863292 | 2.761874e-64 | -8.615850e-47 |
| Msa0651310 | Msa0913140 | 0.856964 | 2.253092e-62 | -8.615850e-47 |
| Msa0670580 | Msa0913140 | -0.801063 | 1.074520e-48 | -8.615850e-47 |
| Msa0691610 | Msa0913140 | -0.814871 | 1.235203e-51 | -8.615850e-47 |
| Msa0693500 | Msa0913140 | 0.871073 | 9.019040e-67 | -8.615850e-47 |
| Msa0701090 | Msa0913140 | 0.803209 | 3.887614e-49 | -8.615850e-47 |
| Msa0702360 | Msa0913140 | 0.828052 | 1.113798e-54 | -8.615850e-47 |
| Msa0702560 | Msa0913140 | 0.833498 | 5.151547e-56 | -8.615850e-47 |
| Msa0702690 | Msa0913140 | 0.837969 | 3.798527e-57 | -8.615850e-47 |
| Msa0705810 | Msa0913140 | 0.840905 | 6.560862e-58 | -8.615850e-47 |
| Msa0707880 | Msa0913140 | 0.805780 | 1.131352e-49 | -8.615850e-47 |
| Msa0719270 | Msa0913140 | -0.800419 | 1.453945e-48 | -8.615850e-47 |
| Msa0720130 | Msa0913140 | 0.809764 | 1.610306e-50 | -8.615850e-47 |
| Msa0732970 | Msa0913140 | -0.806174 | 9.350339e-50 | -8.615850e-47 |
| Msa0742090 | Msa0913140 | 0.837958 | 3.823570e-57 | -8.615850e-47 |
| Msa0744010 | Msa0913140 | 0.819539 | 1.101281e-52 | -8.615850e-47 |
| Msa0745140 | Msa0913140 | -0.842050 | 3.276833e-58 | -8.615850e-47 |
| Msa0754020 | Msa0913140 | 0.846550 | 2.024454e-59 | -8.615850e-47 |
| Msa0756670 | Msa0913140 | 0.801382 | 9.245139e-49 | -8.615850e-47 |
| Msa0769910 | Msa0913140 | 0.809412 | 1.916612e-50 | -8.615850e-47 |
| Msa0773960 | Msa0913140 | -0.824377 | 8.343821e-54 | -8.615850e-47 |
| Msa0776640 | Msa0913140 | -0.840447 | 8.648925e-58 | -8.615850e-47 |
| Msa0788160 | Msa0913140 | 0.849955 | 2.319184e-60 | -8.615850e-47 |
| Msa0790650 | Msa0913140 | 0.807958 | 3.918970e-50 | -8.615850e-47 |
| Msa0794030 | Msa0913140 | -0.801127 | 1.042337e-48 | -8.615850e-47 |
| Msa0802950 | Msa0913140 | 0.823278 | 1.509996e-53 | -8.615850e-47 |
| Msa0803530 | Msa0913140 | 0.820361 | 7.144841e-53 | -8.615850e-47 |
| Msa0804170 | Msa0913140 | -0.804798 | 1.817238e-49 | -8.615850e-47 |
| Msa0807100 | Msa0913140 | 0.847813 | 9.120955e-60 | -8.615850e-47 |
| Msa0817690 | Msa0913140 | -0.813240 | 2.828817e-51 | -8.615850e-47 |
| Msa0823310 | Msa0913140 | 0.864118 | 1.529715e-64 | -8.615850e-47 |
| Msa0825360 | Msa0913140 | 0.817901 | 2.593474e-52 | -8.615850e-47 |
| Msa0825920 | Msa0913140 | -0.841939 | 3.504239e-58 | -8.615850e-47 |
| Msa0833030 | Msa0913140 | 0.843116 | 1.707895e-58 | -8.615850e-47 |
| Msa0128110 | Msa0913140 | 0.800104 | 1.685248e-48 | -8.615850e-47 |
| Msa0137010 | Msa0913140 | 0.813915 | 2.009623e-51 | -8.615850e-47 |
| Msa0147540 | Msa0913140 | 0.804216 | 2.403107e-49 | -8.615850e-47 |
| Msa0163960 | Msa0913140 | 0.841703 | 4.045361e-58 | -8.615850e-47 |
| Msa0167150 | Msa0913140 | 0.812662 | 3.787712e-51 | -8.615850e-47 |
| Msa0177320 | Msa0913140 | -0.820712 | 5.934402e-53 | -8.615850e-47 |
| Msa0180100 | Msa0913140 | 0.871376 | 7.166512e-67 | -8.615850e-47 |
| Msa0183200 | Msa0913140 | 0.814914 | 1.208344e-51 | -8.615850e-47 |
| Msa0184510 | Msa0913140 | 0.868265 | 7.422086e-66 | -8.615850e-47 |
| Msa0187980 | Msa0913140 | 0.851282 | 9.824728e-61 | -8.615850e-47 |
| Msa0195140 | Msa0913140 | 0.820300 | 7.378003e-53 | -8.615850e-47 |
| Msa0207680 | Msa0913140 | -0.852429 | 4.642361e-61 | -8.615850e-47 |
| Msa0207690 | Msa0913140 | -0.809142 | 2.189633e-50 | -8.615850e-47 |
| Msa0218430 | Msa0913140 | 0.804249 | 2.365145e-49 | -8.615850e-47 |
| Msa0225070 | Msa0913140 | 0.826497 | 2.626847e-54 | -8.615850e-47 |
| Msa0236940 | Msa0913140 | -0.810694 | 1.015019e-50 | -8.615850e-47 |
| Msa0371350 | Msa0913140 | 0.835610 | 1.517656e-56 | -8.615850e-47 |
| Msa0375570 | Msa0913140 | 0.801014 | 1.099312e-48 | -8.615850e-47 |
| Msa0378310 | Msa0913140 | 0.817056 | 4.019413e-52 | -8.615850e-47 |
| Msa0386880 | Msa0913140 | -0.838352 | 3.025590e-57 | -8.615850e-47 |
| Msa0403740 | Msa0913140 | 0.821783 | 3.360524e-53 | -8.615850e-47 |
| Msa0404060 | Msa0913140 | 0.827792 | 1.286263e-54 | -8.615850e-47 |
| Msa0404070 | Msa0913140 | 0.832324 | 1.008503e-55 | -8.615850e-47 |
| Msa0412580 | Msa0913140 | 0.800437 | 1.441858e-48 | -8.615850e-47 |
| Msa0419420 | Msa0913140 | 0.828069 | 1.103444e-54 | -8.615850e-47 |
| Msa0428330 | Msa0913140 | 0.830401 | 2.998740e-55 | -8.615850e-47 |
| Msa0436840 | Msa0913140 | -0.812331 | 4.473883e-51 | -8.615850e-47 |
| Msa0437790 | Msa0913140 | 0.810378 | 1.187444e-50 | -8.615850e-47 |
| Msa0456450 | Msa0913140 | 0.822003 | 2.987809e-53 | -8.615850e-47 |
| Msa0457070 | Msa0913140 | 0.835410 | 1.705135e-56 | -8.615850e-47 |
| Msa0468360 | Msa0913140 | 0.803261 | 3.792587e-49 | -8.615850e-47 |
| Msa0471130 | Msa0913140 | 0.804277 | 2.333326e-49 | -8.615850e-47 |
| Msa0477030 | Msa0913140 | -0.802439 | 5.608130e-49 | -8.615850e-47 |
| Msa0477900 | Msa0913140 | -0.808246 | 3.403758e-50 | -8.615850e-47 |
| Msa0240590 | Msa0913140 | 0.845966 | 2.919630e-59 | -8.615850e-47 |
| Msa0256540 | Msa0913140 | -0.823391 | 1.420614e-53 | -8.615850e-47 |
| Msa0266140 | Msa0913140 | 0.830454 | 2.910270e-55 | -8.615850e-47 |
| Msa0267450 | Msa0913140 | 0.833610 | 4.831470e-56 | -8.615850e-47 |
| Msa0267510 | Msa0913140 | 0.834087 | 3.670076e-56 | -8.615850e-47 |
| Msa0279090 | Msa0913140 | 0.832781 | 7.771023e-56 | -8.615850e-47 |
| Msa0279810 | Msa0913140 | -0.808382 | 3.182669e-50 | -8.615850e-47 |
| Msa0304060 | Msa0913140 | 0.836542 | 8.806714e-57 | -8.615850e-47 |
| Msa0319220 | Msa0913140 | -0.803916 | 2.774421e-49 | -8.615850e-47 |
| Msa0333350 | Msa0913140 | 0.808794 | 2.599589e-50 | -8.615850e-47 |
| Msa0334320 | Msa0913140 | -0.808860 | 2.516046e-50 | -8.615850e-47 |
| Msa0349930 | Msa0913140 | -0.808399 | 3.156253e-50 | -8.615850e-47 |
| Msa0364030 | Msa0913140 | 0.821071 | 4.905651e-53 | -8.615850e-47 |
| Msa0508780 | Msa0913140 | 0.802309 | 5.964434e-49 | -8.615850e-47 |
| Msa0530340 | Msa0913140 | 0.804139 | 2.492661e-49 | -8.615850e-47 |
| Msa0555280 | Msa0913140 | -0.808170 | 3.533040e-50 | -8.615850e-47 |
| Msa0556070 | Msa0913140 | 0.816850 | 4.469744e-52 | -8.615850e-47 |
| Msa0566090 | Msa0913140 | 0.825250 | 5.194233e-54 | -8.615850e-47 |
| Msa0570680 | Msa0913140 | 0.812103 | 5.017400e-51 | -8.615850e-47 |
| Msa0575380 | Msa0913140 | -0.822937 | 1.813214e-53 | -8.615850e-47 |
| Msa0576180 | Msa0913140 | -0.840162 | 1.026756e-57 | -8.615850e-47 |
| Msa0577050 | Msa0913140 | 0.814725 | 1.331279e-51 | -8.615850e-47 |
| Msa0579070 | Msa0913140 | 0.852069 | 5.880657e-61 | -8.615850e-47 |
| Msa0579170 | Msa0913140 | 0.845363 | 4.255360e-59 | -8.615850e-47 |
| Msa0579230 | Msa0913140 | 0.855789 | 4.983131e-62 | -8.615850e-47 |
| Msa0587250 | Msa0913140 | 0.838778 | 2.349945e-57 | -8.615850e-47 |
| Msa0597700 | Msa0913140 | -0.828739 | 7.602240e-55 | -8.615850e-47 |
| Msa0848670 | Msa0913140 | 0.802631 | 5.119914e-49 | -8.615850e-47 |
| Msa0861400 | Msa0913140 | 0.804692 | 1.911881e-49 | -8.615850e-47 |
| Msa0862230 | Msa0913140 | 0.813837 | 2.090729e-51 | -8.615850e-47 |
| Msa0864530 | Msa0913140 | 0.820323 | 7.288157e-53 | -8.615850e-47 |
| Msa0865420 | Msa0913140 | -0.820951 | 5.228204e-53 | -8.615850e-47 |
| Msa0868610 | Msa0913140 | -0.832059 | 1.173444e-55 | -8.615850e-47 |
| Msa0879650 | Msa0913140 | 0.849126 | 3.948780e-60 | -8.615850e-47 |
| Msa0880910 | Msa0913140 | -0.810744 | 9.900890e-51 | -8.615850e-47 |
| Msa0887100 | Msa0913140 | 0.947352 | 7.953433e-106 | -8.615850e-47 |
| Msa0913140 | Msa0925630 | 0.831156 | 1.958668e-55 | -8.615850e-47 |
| Msa0913140 | Msa0930210 | -0.855181 | 7.493333e-62 | -8.615850e-47 |
| Msa0913140 | Msa0931550 | 0.827878 | 1.226380e-54 | -8.615850e-47 |
| Msa0913140 | Msa0932140 | -0.828547 | 8.460948e-55 | -8.615850e-47 |
| Msa0913140 | Msa0932150 | -0.820605 | 6.278913e-53 | -8.615850e-47 |
| Msa0913140 | Msa0950470 | 0.883331 | 4.910838e-71 | -8.615850e-47 |
| Msa0913140 | Msa0950570 | 0.896747 | 2.741358e-76 | -8.615850e-47 |
| Msa0913140 | Msa0956910 | 0.811674 | 6.220940e-51 | -8.615850e-47 |
| Msa0913140 | Msa0967780 | -0.817168 | 3.792753e-52 | -8.615850e-47 |
| Msa0913140 | Msa0967900 | 0.830454 | 2.909842e-55 | -8.615850e-47 |
| Msa0913140 | Msa0970270 | -0.831758 | 1.392123e-55 | -8.615850e-47 |
| Msa0913140 | Msa1002820 | -0.812913 | 3.337118e-51 | -8.615850e-47 |
| Msa0913140 | Msa1004720 | 0.815846 | 7.497167e-52 | -8.615850e-47 |
| Msa0913140 | Msa1024570 | -0.811098 | 8.298868e-51 | -8.615850e-47 |
| Msa0913140 | Msa1025440 | 0.804672 | 1.930490e-49 | -8.615850e-47 |
| Msa0913140 | Msa1031180 | -0.836905 | 7.116056e-57 | -8.615850e-47 |
| Msa0913140 | Msa1031530 | 0.806917 | 6.515841e-50 | -8.615850e-47 |
| Msa0913140 | Msa1032740 | -0.837569 | 4.809859e-57 | -8.615850e-47 |
| Msa0913140 | Msa1070360 | -0.827149 | 1.834890e-54 | -8.615850e-47 |
| Msa0913140 | Msa1070630 | 0.838063 | 3.591107e-57 | -8.615850e-47 |
| Msa0913140 | Msa1078590 | 0.811422 | 7.058021e-51 | -8.615850e-47 |
| Msa0913140 | Msa1078600 | 0.816366 | 5.739981e-52 | -8.615850e-47 |
| Msa0913140 | Msa1078760 | 0.824940 | 6.146069e-54 | -8.615850e-47 |
| Msa0913140 | Msa1078770 | 0.816966 | 4.210190e-52 | -8.615850e-47 |
| Msa0913140 | Msa1088740 | 0.846489 | 2.103652e-59 | -8.615850e-47 |
| Msa0913140 | Msa1096520 | 0.803607 | 3.215870e-49 | -8.615850e-47 |
| Msa0913140 | Msa1096570 | 0.816541 | 5.244847e-52 | -8.615850e-47 |
| Msa0913140 | Msa1119430 | -0.839838 | 1.247092e-57 | -8.615850e-47 |
| Msa0913140 | Msa1133440 | 0.818108 | 2.327795e-52 | -8.615850e-47 |
| Msa0913140 | Msa1143860 | 0.812849 | 3.446022e-51 | -8.615850e-47 |
| Msa0913140 | Msa1158200 | -0.813071 | 3.080930e-51 | -8.615850e-47 |
| Msa0913140 | Msa1158450 | 0.837442 | 5.186529e-57 | -8.615850e-47 |
| Msa0913140 | Msa1169590 | 0.804050 | 2.601526e-49 | -8.615850e-47 |
| Msa0913140 | Msa1169600 | 0.819653 | 1.037256e-52 | -8.615850e-47 |
| Msa0913140 | Msa1173380 | 0.801836 | 7.460266e-49 | -8.615850e-47 |
| Msa0913140 | Msa1190350 | 0.852066 | 5.890410e-61 | -8.615850e-47 |
| Msa0913140 | Msa1205270 | 0.847906 | 8.596858e-60 | -8.615850e-47 |
| Msa0913140 | Msa1206220 | -0.828097 | 1.086169e-54 | -8.615850e-47 |
| Msa0913140 | Msa1209160 | 0.884086 | 2.588187e-71 | -8.615850e-47 |
| Msa0913140 | Msa1217890 | -0.809336 | 1.989614e-50 | -8.615850e-47 |
| Msa0913140 | Msa1219060 | 0.814513 | 1.482903e-51 | -8.615850e-47 |
| Msa0913140 | Msa1219540 | -0.811965 | 5.376626e-51 | -8.615850e-47 |
| Msa0913140 | Msa1224820 | 0.817876 | 2.626617e-52 | -8.615850e-47 |
| Msa0913140 | Msa1225140 | 0.812683 | 3.746829e-51 | -8.615850e-47 |
| Msa0913140 | Msa1228460 | 0.824100 | 9.689173e-54 | -8.615850e-47 |
| Msa0913140 | Msa1236860 | 0.900579 | 6.358117e-78 | -8.615850e-47 |
| Msa0913140 | Msa1243630 | 0.816048 | 6.760215e-52 | -8.615850e-47 |
| Msa0913140 | Msa1244220 | 0.813098 | 3.039000e-51 | -8.615850e-47 |
| Msa0913140 | Msa1255020 | 0.857379 | 1.699427e-62 | -8.615850e-47 |
| Msa0913140 | Msa1255030 | 0.812686 | 3.742642e-51 | -8.615850e-47 |
| Msa0913140 | Msa1256910 | -0.801980 | 6.970808e-49 | -8.615850e-47 |
| Msa0913140 | Msa1266120 | 0.828337 | 9.510605e-55 | -8.615850e-47 |
| Msa0913140 | Msa1286860 | 0.833702 | 4.581051e-56 | -8.615850e-47 |
| Msa0913140 | Msa1295210 | 0.806310 | 8.754524e-50 | -8.615850e-47 |
| Msa0913140 | Msa1295470 | 0.858355 | 8.720153e-63 | -8.615850e-47 |
| Msa0913140 | Msa1295480 | 0.810751 | 9.866201e-51 | -8.615850e-47 |
| Msa0913140 | Msa1297220 | 0.867744 | 1.092186e-65 | -8.615850e-47 |
| Msa0913140 | Msa1303760 | 0.874312 | 7.453292e-68 | -8.615850e-47 |
| Msa0913140 | Msa1303820 | 0.863771 | 1.962012e-64 | -8.615850e-47 |
| Msa0913140 | Msa1317240 | 0.901421 | 2.726655e-78 | -8.615850e-47 |
| Msa0913140 | Msa1323260 | 0.864271 | 1.370771e-64 | -8.615850e-47 |
| Msa0913140 | Msa1332690 | 0.825907 | 3.629462e-54 | -8.615850e-47 |
| Msa0913140 | Msa1333210 | -0.823440 | 1.383884e-53 | -8.615850e-47 |
| Msa0913140 | Msa1342360 | 0.821445 | 4.023174e-53 | -8.615850e-47 |
| Msa0913140 | Msa1343450 | 0.858136 | 1.013526e-62 | -8.615850e-47 |
| Msa0913140 | Msa1350580 | 0.814415 | 1.559161e-51 | -8.615850e-47 |
| Msa0913140 | Msa1359890 | 0.804213 | 2.406869e-49 | -8.615850e-47 |
| Msa0913140 | Msa1363070 | 0.876247 | 1.625659e-68 | -8.615850e-47 |
| Msa0913140 | Msa1365130 | 0.808100 | 3.656298e-50 | -8.615850e-47 |
| Msa0913140 | Msa1365820 | -0.806164 | 9.396376e-50 | -8.615850e-47 |
| Msa0913140 | Msa1366140 | 0.800699 | 1.274795e-48 | -8.615850e-47 |
| Msa0913140 | Msa1367900 | 0.813988 | 1.936401e-51 | -8.615850e-47 |
| Msa0913140 | Msa1368390 | -0.810223 | 1.282906e-50 | -8.615850e-47 |
| Msa0913140 | Msa1369180 | 0.835585 | 1.539946e-56 | -8.615850e-47 |
| Msa0913140 | Msa1373390 | 0.815146 | 1.073375e-51 | -8.615850e-47 |
| Msa0913140 | Msa1376010 | 0.812572 | 3.963157e-51 | -8.615850e-47 |
| Msa0913140 | Msa1379270 | 0.804558 | 2.038831e-49 | -8.615850e-47 |
| Msa0913140 | Msa1382750 | 0.812608 | 3.891147e-51 | -8.615850e-47 |
| Msa0913140 | Msa1408860 | 0.848701 | 5.181046e-60 | -8.615850e-47 |
| Msa0913140 | Msa1413020 | -0.802402 | 5.707909e-49 | -8.615850e-47 |
| Msa0913140 | Msa1414780 | 0.830639 | 2.622338e-55 | -8.615850e-47 |
| Msa0913140 | Msa1418840 | 0.815619 | 8.427382e-52 | -8.615850e-47 |
| Msa0913140 | Msa1421540 | -0.800845 | 1.190465e-48 | -8.615850e-47 |
| Msa0913140 | Msa1436660 | 0.811151 | 8.081739e-51 | -8.615850e-47 |
| Msa0913140 | Msa1438510 | -0.805012 | 1.639386e-49 | -8.615850e-47 |
| Msa0913140 | Msa1450630 | 0.824462 | 7.969033e-54 | -8.615850e-47 |
| Msa0913140 | Msa1450780 | 0.832617 | 8.536025e-56 | -8.615850e-47 |
| Msa0913140 | Msa1452560 | 0.821760 | 3.401757e-53 | -8.615850e-47 |
| Msa0913140 | Msa1456620 | 0.825671 | 4.127974e-54 | -8.615850e-47 |
| Msa0913140 | Msa1457770 | -0.815669 | 8.211424e-52 | -8.615850e-47 |
| Msa0913140 | Msa1460530 | 0.815909 | 7.261974e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0913140 | MtrunA17_Chr6g0466691 | 87.732 | 269 | 17 | 2 | 1 | 269 | 1 | 253 | 3.73e-166 | 460 |
| Msa0913140 | MtrunA17_Chr2g0316751 | 51.724 | 203 | 90 | 3 | 75 | 270 | 70 | 271 | 3.59e-63 | 199 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0913140 | AT3G15110.1 | 42.222 | 270 | 139 | 5 | 8 | 268 | 5 | 266 | 4.61e-58 | 186 |
Find 50 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGTTTGTTGCTTTATTC+TGG | 0.170230 | 6_2:-23319466 | Msa0913140:CDS |
| GGAGGTTTGTGAAGAGAAAT+TGG | 0.266914 | 6_2:+23322279 | None:intergenic |
| GAATAGCACAAAAGGACTTA+TGG | 0.287634 | 6_2:-23320991 | Msa0913140:CDS |
| TACTTCTTGAGAAGGATTAA+TGG | 0.287749 | 6_2:+23322160 | None:intergenic |
| CACTACAGAACGGTAATAAA+TGG | 0.300065 | 6_2:-23319529 | Msa0913140:intron |
| TGGTGTGTGGTGATTGAAAT+AGG | 0.300930 | 6_2:+23322257 | None:intergenic |
| AGAAATTATCTGAAATTGTT+TGG | 0.312877 | 6_2:+23320841 | None:intergenic |
| ATTTGTGGAAATTATTATAA+TGG | 0.320700 | 6_2:+23322210 | None:intergenic |
| ACCTTATGGTGATTGTTATC+TGG | 0.328009 | 6_2:+23319638 | None:intergenic |
| AAACATTATGCTCATGTATA+AGG | 0.330276 | 6_2:+23319231 | None:intergenic |
| GTGTATGGAATAAACTCTTT+TGG | 0.353719 | 6_2:-23319484 | Msa0913140:CDS |
| ACTTGATGACCCTTTCTCAT+AGG | 0.363596 | 6_2:+23319426 | None:intergenic |
| AACAATTTCAGATAATTTCT+CGG | 0.364342 | 6_2:-23320838 | Msa0913140:intron |
| TTTGATCCTGCGCTGGATAG+TGG | 0.365094 | 6_2:+23322001 | None:intergenic |
| GCTCCTAACAATGCTTTATC+TGG | 0.378868 | 6_2:+23320933 | None:intergenic |
| TCACCAGATAAAGCATTGTT+AGG | 0.382378 | 6_2:-23320936 | Msa0913140:CDS |
| AATAGCACAAAAGGACTTAT+GGG | 0.391794 | 6_2:-23320990 | Msa0913140:CDS |
| GAGGATTAATTGTGGATTTG+TGG | 0.395724 | 6_2:+23322195 | None:intergenic |
| AGCATTGTTAGGAGCAGTTA+TGG | 0.422251 | 6_2:-23320925 | Msa0913140:CDS |
| TAAACTAACCACTGCAAAAG+TGG | 0.428450 | 6_2:-23322120 | Msa0913140:CDS |
| GGACAACACTGATAGTTACT+TGG | 0.456972 | 6_2:+23322054 | None:intergenic |
| GAAAACTCAAAGCAAAATCA+TGG | 0.462629 | 6_2:-23319398 | Msa0913140:CDS |
| CATGTAGCAGTAGCAACTAT+TGG | 0.465797 | 6_2:+23319282 | None:intergenic |
| GCACTCAACACCTATGAGAA+AGG | 0.482727 | 6_2:-23319436 | Msa0913140:CDS |
| TCATCATTGAATAGCACAAA+AGG | 0.490794 | 6_2:-23320999 | Msa0913140:CDS |
| GATCAAAAGAGCAAAACAAT+TGG | 0.495344 | 6_2:-23321985 | Msa0913140:intron |
| GTAAGTGAGAGTGCAACATT+TGG | 0.507865 | 6_2:+23322312 | None:intergenic |
| TGAAGAGAAATTGGTGATTG+TGG | 0.522068 | 6_2:+23322288 | None:intergenic |
| CACTCAACACCTATGAGAAA+GGG | 0.529960 | 6_2:-23319435 | Msa0913140:CDS |
| ATTAAAGATACAACAAGTGA+AGG | 0.532915 | 6_2:+23322343 | None:intergenic |
| TTGTTAGGAGCAGTTATGGC+TGG | 0.532963 | 6_2:-23320921 | Msa0913140:CDS |
| TTGATCCTGCGCTGGATAGT+GGG | 0.548692 | 6_2:+23322002 | None:intergenic |
| GTGGTTAGTTTATTTAGCAA+CGG | 0.549937 | 6_2:+23322131 | None:intergenic |
| TACCTAGCTACATTTGTGTA+TGG | 0.551091 | 6_2:-23319499 | Msa0913140:CDS |
| GCCAGATAACAATCACCATA+AGG | 0.551485 | 6_2:-23319639 | Msa0913140:intron |
| AACAATGCTTTATCTGGTGA+AGG | 0.551642 | 6_2:+23320939 | None:intergenic |
| GGTGTGTGGTGATTGAAATA+GGG | 0.567014 | 6_2:+23322258 | None:intergenic |
| AATGCTTTATCTGGTGAAGG+TGG | 0.571857 | 6_2:+23320942 | None:intergenic |
| CATAGGTGTTGAGTGCAAGT+TGG | 0.575800 | 6_2:+23319443 | None:intergenic |
| TTAATGGCTGAAACAGTATG+AGG | 0.581022 | 6_2:+23322176 | None:intergenic |
| TTAAAGATACAACAAGTGAA+GGG | 0.588344 | 6_2:+23322344 | None:intergenic |
| TTCCATACACAAATGTAGCT+AGG | 0.589997 | 6_2:+23319497 | None:intergenic |
| AACAGTATGAGGATTAATTG+TGG | 0.592702 | 6_2:+23322187 | None:intergenic |
| TCTTTCCCACTATCCAGCGC+AGG | 0.592749 | 6_2:-23322007 | Msa0913140:CDS |
| TATGAGAAAGGGTCATCAAG+TGG | 0.593728 | 6_2:-23319424 | Msa0913140:CDS |
| GAACAATACAGCAATAGCTA+CGG | 0.610277 | 6_2:+23322028 | None:intergenic |
| AAATTATTATAATGGAGAAG+TGG | 0.628122 | 6_2:+23322218 | None:intergenic |
| GTGTGGTGATTGAAATAGGG+AGG | 0.635700 | 6_2:+23322261 | None:intergenic |
| TAGTTGCTACTGCTACATGT+TGG | 0.654974 | 6_2:-23319278 | Msa0913140:three_prime_UTR |
| ATACAGCAATAGCTACGGAG+AGG | 0.739717 | 6_2:+23322033 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTTTCTCTTTTAAT+TGG | - | chr6_2:23319641-23319660 | Msa0913140:CDS | 10.0% |
| !!! | ATGTTTTGAATAAATTTTTA+AGG | - | chr6_2:23319880-23319899 | Msa0913140:intron | 10.0% |
| !!! | TGTTTTGAATAAATTTTTAA+GGG | - | chr6_2:23319881-23319900 | Msa0913140:intron | 10.0% |
| !!! | ATCTATCAATTTTTTTTTTT+TGG | + | chr6_2:23320214-23320233 | None:intergenic | 10.0% |
| !! | TTTGTATTTAAATTATTTAG+GGG | + | chr6_2:23321375-23321394 | None:intergenic | 10.0% |
| !!! | GTTTTGTATTTAAATTATTT+AGG | + | chr6_2:23321377-23321396 | None:intergenic | 10.0% |
| !!! | TTTTGTATTTAAATTAGTTA+GGG | - | chr6_2:23321541-23321560 | Msa0913140:intron | 10.0% |
| !!! | TATTTTAAAAGTAATAACAA+CGG | + | chr6_2:23321699-23321718 | None:intergenic | 10.0% |
| !! | ATTTGTGGAAATTATTATAA+TGG | + | chr6_2:23319317-23319336 | None:intergenic | 15.0% |
| !!! | TTAATTGGAAATTTTTATTG+AGG | - | chr6_2:23319656-23319675 | Msa0913140:intron | 15.0% |
| !!! | GTTTTGAATAAATTTTTAAG+GGG | - | chr6_2:23319882-23319901 | Msa0913140:intron | 15.0% |
| !!! | TTTTGAATAAATTTTTAAGG+GGG | - | chr6_2:23319883-23319902 | Msa0913140:intron | 15.0% |
| !!! | CAATTTTTTTTTTTTGGTAA+AGG | + | chr6_2:23320208-23320227 | None:intergenic | 15.0% |
| !! | TAACTATTCATTCATAAAAA+AGG | + | chr6_2:23320738-23320757 | None:intergenic | 15.0% |
| !! | TTGTATTTAAATTATTTAGG+GGG | + | chr6_2:23321374-23321393 | None:intergenic | 15.0% |
| !!! | GTTTTGTATTTAAATTAGTT+AGG | - | chr6_2:23321540-23321559 | Msa0913140:intron | 15.0% |
| !! | TTTGTATTTAAATTAGTTAG+GGG | - | chr6_2:23321542-23321561 | Msa0913140:intron | 15.0% |
| !! | ATAATATTCTTTCATCTTAA+TGG | - | chr6_2:23321798-23321817 | Msa0913140:intron | 15.0% |
| !! | CATAAAAAATGAAAACATTA+AGG | + | chr6_2:23321940-23321959 | None:intergenic | 15.0% |
| !!! | AAATTATTATAATGGAGAAG+TGG | + | chr6_2:23319309-23319328 | None:intergenic | 20.0% |
| !! | TTCAAAATGATGAAAATATG+AGG | - | chr6_2:23320034-23320053 | Msa0913140:intron | 20.0% |
| !! | GAATATTGCTAGTAATATTT+AGG | + | chr6_2:23320078-23320097 | None:intergenic | 20.0% |
| !!! | TCTTATTTGGTAAATTTATG+TGG | - | chr6_2:23320127-23320146 | Msa0913140:intron | 20.0% |
| !!! | GATAGATATTTTATTGAAAG+TGG | - | chr6_2:23320227-23320246 | Msa0913140:intron | 20.0% |
| !! | TTATTCAAAGAATATGTATG+TGG | + | chr6_2:23320383-23320402 | None:intergenic | 20.0% |
| !! | TTTCATCAAAGAATATTATG+TGG | + | chr6_2:23320461-23320480 | None:intergenic | 20.0% |
| !! | CATAATATTCTTTGATGAAA+TGG | - | chr6_2:23320461-23320480 | Msa0913140:intron | 20.0% |
| !!! | ATTGGTGATTTTAGAAATAT+AGG | - | chr6_2:23320484-23320503 | Msa0913140:intron | 20.0% |
| !!! | AGAAATTATCTGAAATTGTT+TGG | + | chr6_2:23320686-23320705 | None:intergenic | 20.0% |
| !! | AACAATTTCAGATAATTTCT+CGG | - | chr6_2:23320686-23320705 | Msa0913140:intron | 20.0% |
| !!! | AATGTGTTTATTTTATCTCT+AGG | - | chr6_2:23320851-23320870 | Msa0913140:CDS | 20.0% |
| !!! | ATGTGTTTATTTTATCTCTA+GGG | - | chr6_2:23320852-23320871 | Msa0913140:CDS | 20.0% |
| !!! | TTTAATTTTTTTTTGGCCTT+GGG | + | chr6_2:23321438-23321457 | None:intergenic | 20.0% |
| !!! | TTTTAATTTTTTTTTGGCCT+TGG | + | chr6_2:23321439-23321458 | None:intergenic | 20.0% |
| !! | AAAATTAAAAAAATGACACG+TGG | - | chr6_2:23321449-23321468 | Msa0913140:intron | 20.0% |
| !! | TCATTTGTATATAACAAAGT+TGG | + | chr6_2:23321616-23321635 | None:intergenic | 20.0% |
| !!! | ACTTATTTGAGATAAGTTTA+GGG | + | chr6_2:23321917-23321936 | None:intergenic | 20.0% |
| ! | TTAAAGATACAACAAGTGAA+GGG | + | chr6_2:23319183-23319202 | None:intergenic | 25.0% |
| ! | ATTAAAGATACAACAAGTGA+AGG | + | chr6_2:23319184-23319203 | None:intergenic | 25.0% |
| ! | TCATCTATAGCATCAAAAAT+GGG | + | chr6_2:23319438-23319457 | None:intergenic | 25.0% |
| !!! | GTATTAGAATGAGTTTTGTT+AGG | - | chr6_2:23319705-23319724 | Msa0913140:intron | 25.0% |
| ! | GTTAGATTTAATTGTAGTTC+TGG | - | chr6_2:23319768-23319787 | Msa0913140:intron | 25.0% |
| ! | CATAAAATGGTGAAAATATG+TGG | + | chr6_2:23319795-23319814 | None:intergenic | 25.0% |
| !! | CACATATTTTCACCATTTTA+TGG | - | chr6_2:23319793-23319812 | Msa0913140:intron | 25.0% |
| ! | TGATAGGTAAATATCAACAT+TGG | + | chr6_2:23319925-23319944 | None:intergenic | 25.0% |
| ! | GCAATATATGATATGATGAT+AGG | + | chr6_2:23319941-23319960 | None:intergenic | 25.0% |
| ! | CATGAAAGTTTAAAAATGCT+GGG | + | chr6_2:23320155-23320174 | None:intergenic | 25.0% |
| ! | ATACATCAATACATGATCAA+GGG | + | chr6_2:23320178-23320197 | None:intergenic | 25.0% |
| ! | AATACATCAATACATGATCA+AGG | + | chr6_2:23320179-23320198 | None:intergenic | 25.0% |
| !! | AATTAATTTTGTACATCCTC+AGG | - | chr6_2:23320287-23320306 | Msa0913140:intron | 25.0% |
| ! | TTGTTTATAATAGTAACCTG+AGG | + | chr6_2:23320306-23320325 | None:intergenic | 25.0% |
| ! | TATTCTTTGATGAAATGGAT+TGG | - | chr6_2:23320466-23320485 | Msa0913140:intron | 25.0% |
| !!! | TTTTAGAAATATAGGTCTTC+TGG | - | chr6_2:23320492-23320511 | Msa0913140:intron | 25.0% |
| !!! | ACATTAAAAGTGTCAACAAA+GGG | + | chr6_2:23320818-23320837 | None:intergenic | 25.0% |
| !!! | CACTTTTAATGTCATTTCAT+TGG | - | chr6_2:23320826-23320845 | Msa0913140:intron | 25.0% |
| ! | TAGTATGAGAATGTATTGAA+TGG | - | chr6_2:23321046-23321065 | Msa0913140:intron | 25.0% |
| ! | CTATCCTTAGTTGTATAAAT+AGG | + | chr6_2:23321108-23321127 | None:intergenic | 25.0% |
| ! | CATTGTAGTGCATTTATATT+CGG | - | chr6_2:23321192-23321211 | Msa0913140:intron | 25.0% |
| !! | GAAAATTATGTGTTCTAGAT+TGG | + | chr6_2:23321298-23321317 | None:intergenic | 25.0% |
| !!! | TTAATTTTTTTTTGGCCTTG+GGG | + | chr6_2:23321437-23321456 | None:intergenic | 25.0% |
| !! | TATTGAATCTTTGACAGTTT+TGG | + | chr6_2:23321509-23321528 | None:intergenic | 25.0% |
| ! | TGTCAAAGATTCAATACTTA+GGG | - | chr6_2:23321513-23321532 | Msa0913140:intron | 25.0% |
| !! | GACTTATTTGAGATAAGTTT+AGG | + | chr6_2:23321918-23321937 | None:intergenic | 25.0% |
| !!! | CTACATGTTGGTTTTTTAAT+AGG | - | chr6_2:23322258-23322277 | Msa0913140:CDS | 25.0% |
| ! | AAACATTATGCTCATGTATA+AGG | + | chr6_2:23322296-23322315 | None:intergenic | 25.0% |
| TAATGAAGAAAAATGGTGTG+TGG | + | chr6_2:23319283-23319302 | None:intergenic | 30.0% | |
| GTGGAGATAATGAAGAAAAA+TGG | + | chr6_2:23319290-23319309 | None:intergenic | 30.0% | |
| AACAGTATGAGGATTAATTG+TGG | + | chr6_2:23319340-23319359 | None:intergenic | 30.0% | |
| TACTTCTTGAGAAGGATTAA+TGG | + | chr6_2:23319367-23319386 | None:intergenic | 30.0% | |
| GGTAAAAATACTTCTTGAGA+AGG | + | chr6_2:23319375-23319394 | None:intergenic | 30.0% | |
| !! | GTGGTTAGTTTATTTAGCAA+CGG | + | chr6_2:23319396-23319415 | None:intergenic | 30.0% |
| CATCTATAGCATCAAAAATG+GGG | + | chr6_2:23319437-23319456 | None:intergenic | 30.0% | |
| GTCATCTATAGCATCAAAAA+TGG | + | chr6_2:23319439-23319458 | None:intergenic | 30.0% | |
| GATCAAAAGAGCAAAACAAT+TGG | - | chr6_2:23319539-23319558 | Msa0913140:intron | 30.0% | |
| GTCTAGTTACTAAGAATTTC+TGG | - | chr6_2:23319595-23319614 | Msa0913140:intron | 30.0% | |
| GAACCAATTTCTTTGTAGAA+GGG | + | chr6_2:23319740-23319759 | None:intergenic | 30.0% | |
| TGAACCAATTTCTTTGTAGA+AGG | + | chr6_2:23319741-23319760 | None:intergenic | 30.0% | |
| GGATGATCAATTCCATAAAA+TGG | + | chr6_2:23319808-23319827 | None:intergenic | 30.0% | |
| ATGCATATCATCCTATTTGA+TGG | + | chr6_2:23319862-23319881 | None:intergenic | 30.0% | |
| GCATGAAAGTTTAAAAATGC+TGG | + | chr6_2:23320156-23320175 | None:intergenic | 30.0% | |
| CCTTTGTATATCATCTAAAG+AGG | + | chr6_2:23320411-23320430 | None:intergenic | 30.0% | |
| CCTCTTTAGATGATATACAA+AGG | - | chr6_2:23320408-23320427 | Msa0913140:intron | 30.0% | |
| TCATCATTGAATAGCACAAA+AGG | - | chr6_2:23320525-23320544 | Msa0913140:intron | 30.0% | |
| AATAGCACAAAAGGACTTAT+GGG | - | chr6_2:23320534-23320553 | Msa0913140:intron | 30.0% | |
| CCTCATATGAACATAAACAA+TGG | + | chr6_2:23320780-23320799 | None:intergenic | 30.0% | |
| CCATTGTTTATGTTCATATG+AGG | - | chr6_2:23320777-23320796 | Msa0913140:intron | 30.0% | |
| !! | GACATTAAAAGTGTCAACAA+AGG | + | chr6_2:23320819-23320838 | None:intergenic | 30.0% |
| ! | TATCTCTAGGGAGAAAAATT+AGG | - | chr6_2:23320864-23320883 | Msa0913140:CDS | 30.0% |
| TTTCTTTGATATGTCTCCAT+AGG | - | chr6_2:23320892-23320911 | Msa0913140:CDS | 30.0% | |
| ATGGATTTAAGGGAATCATA+GGG | + | chr6_2:23320931-23320950 | None:intergenic | 30.0% | |
| TATGGATTTAAGGGAATCAT+AGG | + | chr6_2:23320932-23320951 | None:intergenic | 30.0% | |
| CCATGTCATTATGGATTTAA+GGG | + | chr6_2:23320941-23320960 | None:intergenic | 30.0% | |
| CCTTAAATCCATAATGACAT+GGG | - | chr6_2:23320939-23320958 | Msa0913140:CDS | 30.0% | |
| CTTAAATCCATAATGACATG+GGG | - | chr6_2:23320940-23320959 | Msa0913140:CDS | 30.0% | |
| TAGTTGTATAAATAGGTCCT+AGG | + | chr6_2:23321101-23321120 | None:intergenic | 30.0% | |
| AGGACCTATTTATACAACTA+AGG | - | chr6_2:23321101-23321120 | Msa0913140:intron | 30.0% | |
| TGTGATAAGTATGTTGTGTT+CGG | - | chr6_2:23321241-23321260 | Msa0913140:intron | 30.0% | |
| TGCCAAAGATTCAATACTTA+GGG | + | chr6_2:23321405-23321424 | None:intergenic | 30.0% | |
| ! | TATTGAATCTTTGGCAGTTT+TGG | - | chr6_2:23321409-23321428 | Msa0913140:intron | 30.0% |
| !!! | TAATTTTTTTTTGGCCTTGG+GGG | + | chr6_2:23321436-23321455 | None:intergenic | 30.0% |
| CTGTCAAAGATTCAATACTT+AGG | - | chr6_2:23321512-23321531 | Msa0913140:intron | 30.0% | |
| GTCAAAGATTCAATACTTAG+GGG | - | chr6_2:23321514-23321533 | Msa0913140:intron | 30.0% | |
| TCAAAGATTCAATACTTAGG+GGG | - | chr6_2:23321515-23321534 | Msa0913140:intron | 30.0% | |
| ! | TGCATTTTCTTAAGTGCTTT+TGG | + | chr6_2:23321664-23321683 | None:intergenic | 30.0% |
| CACTTAAGAAAATGCACATA+AGG | - | chr6_2:23321668-23321687 | Msa0913140:intron | 30.0% | |
| ! | ATTTGAGATAAGTTTAGGGA+AGG | + | chr6_2:23321913-23321932 | None:intergenic | 30.0% |
| ATATTTATCCCACTACAGAA+CGG | - | chr6_2:23321985-23322004 | Msa0913140:intron | 30.0% | |
| ATTTATTACCGTTCTGTAGT+GGG | + | chr6_2:23321996-23322015 | None:intergenic | 30.0% | |
| ! | GTGTATGGAATAAACTCTTT+TGG | - | chr6_2:23322040-23322059 | Msa0913140:CDS | 30.0% |
| !! | TTTGGTTTGTTGCTTTATTC+TGG | - | chr6_2:23322058-23322077 | Msa0913140:CDS | 30.0% |
| GAAAACTCAAAGCAAAATCA+TGG | - | chr6_2:23322126-23322145 | Msa0913140:CDS | 30.0% | |
| ! | TGAAGAGAAATTGGTGATTG+TGG | + | chr6_2:23319239-23319258 | None:intergenic | 35.0% |
| GAGGATTAATTGTGGATTTG+TGG | + | chr6_2:23319332-23319351 | None:intergenic | 35.0% | |
| TTAATGGCTGAAACAGTATG+AGG | + | chr6_2:23319351-23319370 | None:intergenic | 35.0% | |
| TAAACTAACCACTGCAAAAG+TGG | - | chr6_2:23319404-23319423 | Msa0913140:CDS | 35.0% | |
| GAACAATACAGCAATAGCTA+CGG | + | chr6_2:23319499-23319518 | None:intergenic | 35.0% | |
| CAACCCTTCTACAAAGAAAT+TGG | - | chr6_2:23319734-23319753 | Msa0913140:intron | 35.0% | |
| TCTTAATCCAGCCATCAAAT+AGG | - | chr6_2:23319848-23319867 | Msa0913140:intron | 35.0% | |
| ! | ATATCATCCTATTTGATGGC+TGG | + | chr6_2:23319858-23319877 | None:intergenic | 35.0% |
| TCAACATTGGTGAAATCGTA+AGG | + | chr6_2:23319912-23319931 | None:intergenic | 35.0% | |
| TCAACACATGCTCTCTTATT+TGG | - | chr6_2:23320114-23320133 | Msa0913140:intron | 35.0% | |
| GAATAGCACAAAAGGACTTA+TGG | - | chr6_2:23320533-23320552 | Msa0913140:intron | 35.0% | |
| AACAATGCTTTATCTGGTGA+AGG | + | chr6_2:23320588-23320607 | None:intergenic | 35.0% | |
| !! | TCACCAGATAAAGCATTGTT+AGG | - | chr6_2:23320588-23320607 | Msa0913140:intron | 35.0% |
| AACAAAGGGTTATGGACTTA+TGG | + | chr6_2:23320804-23320823 | None:intergenic | 35.0% | |
| ! | AAAGTGTCAACAAAGGGTTA+TGG | + | chr6_2:23320812-23320831 | None:intergenic | 35.0% |
| GGGAGTTAAGTTAAAACCTA+TGG | + | chr6_2:23320911-23320930 | None:intergenic | 35.0% | |
| CCCTTAAATCCATAATGACA+TGG | - | chr6_2:23320938-23320957 | Msa0913140:CDS | 35.0% | |
| CCCATGTCATTATGGATTTA+AGG | + | chr6_2:23320942-23320961 | None:intergenic | 35.0% | |
| ! | TCTTGATGGAATGTTGATTG+AGG | + | chr6_2:23320986-23321005 | None:intergenic | 35.0% |
| ACAACTAAGGATAGAGTTGT+TGG | - | chr6_2:23321114-23321133 | Msa0913140:intron | 35.0% | |
| GTGATAAGTATGTTGTGTTC+GGG | - | chr6_2:23321242-23321261 | Msa0913140:intron | 35.0% | |
| !!! | GCAAGTTTTGGAAAGATAGA+CGG | + | chr6_2:23321343-23321362 | None:intergenic | 35.0% |
| GTCTATCTTTCCAAAACTTG+CGG | - | chr6_2:23321342-23321361 | Msa0913140:intron | 35.0% | |
| CAAAGATTCAATACTTAGGG+GGG | + | chr6_2:23321516-23321535 | None:intergenic | 35.0% | |
| CCAAAGATTCAATACTTAGG+GGG | + | chr6_2:23321403-23321422 | None:intergenic | 35.0% | |
| GCCAAAGATTCAATACTTAG+GGG | + | chr6_2:23321404-23321423 | None:intergenic | 35.0% | |
| CTGCCAAAGATTCAATACTT+AGG | + | chr6_2:23321406-23321425 | None:intergenic | 35.0% | |
| !!! | AATTTTTTTTTGGCCTTGGG+GGG | + | chr6_2:23321435-23321454 | None:intergenic | 35.0% |
| !! | AGTTGGCTTAATTGCACTTT+TGG | + | chr6_2:23321599-23321618 | None:intergenic | 35.0% |
| TGAATGTCTTATGCTTTCTC+AGG | - | chr6_2:23321859-23321878 | Msa0913140:intron | 35.0% | |
| ACCTTATGGTGATTGTTATC+TGG | + | chr6_2:23321889-23321908 | None:intergenic | 35.0% | |
| CATTTATTACCGTTCTGTAG+TGG | + | chr6_2:23321997-23322016 | None:intergenic | 35.0% | |
| CACTACAGAACGGTAATAAA+TGG | - | chr6_2:23321995-23322014 | Msa0913140:CDS | 35.0% | |
| TACCTAGCTACATTTGTGTA+TGG | - | chr6_2:23322025-23322044 | Msa0913140:CDS | 35.0% | |
| TTCCATACACAAATGTAGCT+AGG | + | chr6_2:23322030-23322049 | None:intergenic | 35.0% | |
| ! | GTAAGTGAGAGTGCAACATT+TGG | + | chr6_2:23319215-23319234 | None:intergenic | 40.0% |
| GGAGGTTTGTGAAGAGAAAT+TGG | + | chr6_2:23319248-23319267 | None:intergenic | 40.0% | |
| GGTGTGTGGTGATTGAAATA+GGG | + | chr6_2:23319269-23319288 | None:intergenic | 40.0% | |
| TGGTGTGTGGTGATTGAAAT+AGG | + | chr6_2:23319270-23319289 | None:intergenic | 40.0% | |
| !! | GCTTAATTCCACTTTTGCAG+TGG | + | chr6_2:23319415-23319434 | None:intergenic | 40.0% |
| GGACAACACTGATAGTTACT+TGG | + | chr6_2:23319473-23319492 | None:intergenic | 40.0% | |
| AATGCTTTATCTGGTGAAGG+TGG | + | chr6_2:23320585-23320604 | None:intergenic | 40.0% | |
| GCTCCTAACAATGCTTTATC+TGG | + | chr6_2:23320594-23320613 | None:intergenic | 40.0% | |
| AGCATTGTTAGGAGCAGTTA+TGG | - | chr6_2:23320599-23320618 | Msa0913140:intron | 40.0% | |
| ATGATCACCCCATGTCATTA+TGG | + | chr6_2:23320950-23320969 | None:intergenic | 40.0% | |
| ATTCCATCAAGATGCGAGTT+TGG | - | chr6_2:23320994-23321013 | Msa0913140:CDS | 40.0% | |
| ATTCCAAACTCGCATCTTGA+TGG | + | chr6_2:23321000-23321019 | None:intergenic | 40.0% | |
| ! | TTAAGCGTCAAAGTGTTTGC+TGG | + | chr6_2:23321024-23321043 | None:intergenic | 40.0% |
| AGTTGTGTACCTTTGTGTTG+TGG | - | chr6_2:23321074-23321093 | Msa0913140:intron | 40.0% | |
| TGATACCCACGATTTGTAAC+CGG | + | chr6_2:23321155-23321174 | None:intergenic | 40.0% | |
| TCGGAAGCAAAAGTTTGACA+CGG | - | chr6_2:23321211-23321230 | Msa0913140:intron | 40.0% | |
| AAGCAAAAGTTTGACACGGT+TGG | - | chr6_2:23321215-23321234 | Msa0913140:intron | 40.0% | |
| AGCAAAAGTTTGACACGGTT+GGG | - | chr6_2:23321216-23321235 | Msa0913140:intron | 40.0% | |
| ! | CGTAGCATATAGGGAGTTTT+GGG | - | chr6_2:23321265-23321284 | Msa0913140:intron | 40.0% |
| !!! | TATAGGGAGTTTTGGGTCTT+AGG | - | chr6_2:23321272-23321291 | Msa0913140:intron | 40.0% |
| !! | CCCCCTAAGTATTGAATCTT+TGG | - | chr6_2:23321400-23321419 | Msa0913140:intron | 40.0% |
| !!! | ACCGCAAGTTTTGGAAAGAT+AGG | - | chr6_2:23321570-23321589 | Msa0913140:intron | 40.0% |
| CCCTATCTTTCCAAAACTTG+CGG | + | chr6_2:23321574-23321593 | None:intergenic | 40.0% | |
| !!! | CCGCAAGTTTTGGAAAGATA+GGG | - | chr6_2:23321571-23321590 | Msa0913140:intron | 40.0% |
| !!! | CGCAAGTTTTGGAAAGATAG+GGG | - | chr6_2:23321572-23321591 | Msa0913140:intron | 40.0% |
| !!! | GCAAGTTTTGGAAAGATAGG+GGG | - | chr6_2:23321573-23321592 | Msa0913140:intron | 40.0% |
| GCCAGATAACAATCACCATA+AGG | - | chr6_2:23321885-23321904 | Msa0913140:intron | 40.0% | |
| !! | AGTTTAGGGAAGGTACCTTA+TGG | + | chr6_2:23321903-23321922 | None:intergenic | 40.0% |
| CACTCAACACCTATGAGAAA+GGG | - | chr6_2:23322089-23322108 | Msa0913140:CDS | 40.0% | |
| ! | ACTTGATGACCCTTTCTCAT+AGG | + | chr6_2:23322101-23322120 | None:intergenic | 40.0% |
| TATGAGAAAGGGTCATCAAG+TGG | - | chr6_2:23322100-23322119 | Msa0913140:CDS | 40.0% | |
| CATGTAGCAGTAGCAACTAT+TGG | + | chr6_2:23322245-23322264 | None:intergenic | 40.0% | |
| TAGTTGCTACTGCTACATGT+TGG | - | chr6_2:23322246-23322265 | Msa0913140:CDS | 40.0% | |
| GTGTGGTGATTGAAATAGGG+AGG | + | chr6_2:23319266-23319285 | None:intergenic | 45.0% | |
| ATACAGCAATAGCTACGGAG+AGG | + | chr6_2:23319494-23319513 | None:intergenic | 45.0% | |
| TTGTTAGGAGCAGTTATGGC+TGG | - | chr6_2:23320603-23320622 | Msa0913140:intron | 45.0% | |
| ACATGGGGTGATCATTGATG+TGG | - | chr6_2:23320955-23320974 | Msa0913140:CDS | 45.0% | |
| CATGGGGTGATCATTGATGT+GGG | - | chr6_2:23320956-23320975 | Msa0913140:CDS | 45.0% | |
| ! | GATGGAATGTTGATTGAGGC+AGG | + | chr6_2:23320982-23321001 | None:intergenic | 45.0% |
| TACCTTTGTGTTGTGGTCCT+AGG | - | chr6_2:23321081-23321100 | Msa0913140:intron | 45.0% | |
| ! | GCGTAGCATATAGGGAGTTT+TGG | - | chr6_2:23321264-23321283 | Msa0913140:intron | 45.0% |
| !! | CATAGGTGTTGAGTGCAAGT+TGG | + | chr6_2:23322084-23322103 | None:intergenic | 45.0% |
| GCACTCAACACCTATGAGAA+AGG | - | chr6_2:23322088-23322107 | Msa0913140:CDS | 45.0% | |
| !!! | ATTTACAAATTTTTAAATAT+AGG | + | chr6_2:23319829-23319848 | None:intergenic | 5.0% |
| !!! | TTTTGTATTTAAATTATTTA+GGG | + | chr6_2:23321376-23321395 | None:intergenic | 5.0% |
| !!! | TCATTTTTTTAATTTTTTTT+TGG | + | chr6_2:23321445-23321464 | None:intergenic | 5.0% |
| TTGATCCTGCGCTGGATAGT+GGG | + | chr6_2:23319525-23319544 | None:intergenic | 50.0% | |
| TTTGATCCTGCGCTGGATAG+TGG | + | chr6_2:23319526-23319545 | None:intergenic | 50.0% | |
| ! | TTGCTCTTTTGATCCTGCGC+TGG | + | chr6_2:23319533-23319552 | None:intergenic | 50.0% |
| GTCCTAGGACCACAACACAA+AGG | + | chr6_2:23321086-23321105 | None:intergenic | 50.0% | |
| TGTGTTCGGGCGTAGCATAT+AGG | - | chr6_2:23321255-23321274 | Msa0913140:intron | 50.0% | |
| GTGTTCGGGCGTAGCATATA+GGG | - | chr6_2:23321256-23321275 | Msa0913140:intron | 50.0% | |
| ! | GGGGTTGTAACCGCAAGTTT+TGG | + | chr6_2:23321355-23321374 | None:intergenic | 50.0% |
| TGACACGTGGCACCTCATTT+AGG | - | chr6_2:23321462-23321481 | Msa0913140:intron | 50.0% | |
| GACACGTGGCACCTCATTTA+GGG | - | chr6_2:23321463-23321482 | Msa0913140:intron | 50.0% | |
| TCTTTCCCACTATCCAGCGC+AGG | - | chr6_2:23319517-23319536 | Msa0913140:CDS | 55.0% | |
| AGTTGTTGGAGTAGTCGCCG+AGG | - | chr6_2:23321128-23321147 | Msa0913140:intron | 55.0% | |
| GTTGTTGGAGTAGTCGCCGA+GGG | - | chr6_2:23321129-23321148 | Msa0913140:intron | 55.0% | |
| CACGATTTGTAACCGGCCCT+CGG | + | chr6_2:23321148-23321167 | None:intergenic | 55.0% | |
| GAGGGCCGGTTACAAATCGT+GGG | - | chr6_2:23321147-23321166 | Msa0913140:intron | 55.0% | |
| CTGACGTGGCACCCTAAATG+AGG | + | chr6_2:23321477-23321496 | None:intergenic | 55.0% | |
| ! | GGGGCTGTAACCGCAAGTTT+TGG | - | chr6_2:23321561-23321580 | Msa0913140:intron | 55.0% |
| CGAGGGCCGGTTACAAATCG+TGG | - | chr6_2:23321146-23321165 | Msa0913140:intron | 60.0% | |
| !! | TTGGCAGTTTTGGCCCCCCA+AGG | - | chr6_2:23321419-23321438 | Msa0913140:intron | 60.0% |
| ! | TTAGGGTGCCACGTCAGCGT+TGG | - | chr6_2:23321480-23321499 | Msa0913140:intron | 60.0% |
| ! | TAGGGTGCCACGTCAGCGTT+GGG | - | chr6_2:23321481-23321500 | Msa0913140:intron | 60.0% |
| TTGGAGTAGTCGCCGAGGGC+CGG | - | chr6_2:23321133-23321152 | Msa0913140:intron | 65.0% | |
| ! | AGGGTGCCACGTCAGCGTTG+GGG | - | chr6_2:23321482-23321501 | Msa0913140:intron | 65.0% |
| TTTGGCCCCCAACGCTGACG+TGG | + | chr6_2:23321491-23321510 | None:intergenic | 65.0% | |
| ! | GGGTGCCACGTCAGCGTTGG+GGG | - | chr6_2:23321483-23321502 | Msa0913140:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 23319165 | 23322381 | 23319165 | ID=Msa0913140;Name=Msa0913140 |
| chr6_2 | mRNA | 23319165 | 23322381 | 23319165 | ID=Msa0913140-mRNA-1;Parent=Msa0913140;Name=Msa0913140-mRNA-1;_AED=0.01;_eAED=0.01;_QI=51|1|1|1|1|1|4|147|270 |
| chr6_2 | exon | 23319165 | 23319543 | 23319165 | ID=Msa0913140-mRNA-1:exon:4595;Parent=Msa0913140-mRNA-1 |
| chr6_2 | exon | 23319640 | 23319665 | 23319640 | ID=Msa0913140-mRNA-1:exon:4594;Parent=Msa0913140-mRNA-1 |
| chr6_2 | exon | 23320839 | 23321048 | 23320839 | ID=Msa0913140-mRNA-1:exon:4593;Parent=Msa0913140-mRNA-1 |
| chr6_2 | exon | 23321986 | 23322381 | 23321986 | ID=Msa0913140-mRNA-1:exon:4592;Parent=Msa0913140-mRNA-1 |
| chr6_2 | five_prime_UTR | 23322331 | 23322381 | 23322331 | ID=Msa0913140-mRNA-1:five_prime_utr;Parent=Msa0913140-mRNA-1 |
| chr6_2 | CDS | 23321986 | 23322330 | 23321986 | ID=Msa0913140-mRNA-1:cds;Parent=Msa0913140-mRNA-1 |
| chr6_2 | CDS | 23320839 | 23321048 | 23320839 | ID=Msa0913140-mRNA-1:cds;Parent=Msa0913140-mRNA-1 |
| chr6_2 | CDS | 23319640 | 23319665 | 23319640 | ID=Msa0913140-mRNA-1:cds;Parent=Msa0913140-mRNA-1 |
| chr6_2 | CDS | 23319312 | 23319543 | 23319312 | ID=Msa0913140-mRNA-1:cds;Parent=Msa0913140-mRNA-1 |
| chr6_2 | three_prime_UTR | 23319165 | 23319311 | 23319165 | ID=Msa0913140-mRNA-1:three_prime_utr;Parent=Msa0913140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
