AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0475400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475400 MtrunA17_Chr3g0132571 93.117 523 16 1 1 523 1 503 0.0 1000
Msa0475400 MtrunA17_Chr8g0359961 31.965 463 311 3 50 511 26 485 5.01e-76 248
Msa0475400 MtrunA17_Chr1g0185601 31.337 501 328 8 28 518 2 496 1.14e-75 248
Msa0475400 MtrunA17_Chr2g0282091 28.247 485 340 4 40 519 7 488 1.19e-60 207
Msa0475400 MtrunA17_Chr4g0021331 28.894 443 291 9 75 506 45 474 5.15e-59 203
Msa0475400 MtrunA17_Chr8g0368151 29.442 394 273 3 77 468 43 433 2.04e-57 199
Msa0475400 MtrunA17_Chr1g0155351 29.602 402 274 5 6 405 8 402 2.06e-56 194
Msa0475400 MtrunA17_Chr2g0303221 28.246 439 295 9 39 466 8 437 5.48e-56 195
Msa0475400 MtrunA17_Chr2g0324251 29.929 421 282 5 74 486 49 464 2.16e-52 185
Msa0475400 MtrunA17_Chr1g0194521 28.606 416 282 7 56 466 89 494 1.72e-51 184
Msa0475400 MtrunA17_Chr8g0335951 25.676 296 192 4 244 518 160 448 3.47e-31 125
Msa0475400 MtrunA17_Chr8g0349421 27.426 237 168 1 282 518 4 236 4.85e-28 112
Msa0475400 MtrunA17_Chr7g0256181 23.974 463 323 10 54 508 156 597 3.55e-27 115
Msa0475400 MtrunA17_Chr1g0171501 24.545 440 308 11 76 508 158 580 4.51e-25 109
Msa0475400 MtrunA17_Chr2g0328121 20.682 469 362 6 57 519 41 505 2.08e-20 94.4
Msa0475400 MtrunA17_Chr8g0349431 34.259 108 70 1 76 182 12 119 1.38e-15 73.6
Msa0475400 MtrunA17_Chr8g0359551 24.176 273 202 3 160 431 214 482 3.71e-13 72.0
Msa0475400 MtrunA17_Chr1g0170071 23.891 293 198 6 65 355 578 847 1.37e-12 70.5
Msa0475400 MtrunA17_Chr6g0481621 21.930 342 250 9 95 430 231 561 5.27e-11 65.1
Msa0475400 MtrunA17_Chr1g0168811 21.186 354 236 7 112 426 203 552 5.86e-11 65.1
Msa0475400 MtrunA17_Chr8g0353181 22.393 326 241 5 164 487 171 486 6.72e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475400 AT5G27460.1 53.895 475 211 4 39 508 20 491 3.77e-178 510
Msa0475400 AT1G02150.1 34.375 384 246 3 76 458 86 464 9.03e-80 259
Msa0475400 AT4G02820.1 30.802 474 322 4 46 519 50 517 3.37e-77 252
Msa0475400 AT4G21705.1 29.065 492 338 4 29 518 4 486 5.61e-69 229
Msa0475400 AT1G02370.1 28.667 450 309 5 76 519 90 533 2.16e-65 221
Msa0475400 AT2G20710.1 30.465 430 294 4 34 462 15 440 4.62e-64 217
Msa0475400 AT1G60770.1 31.738 397 264 4 126 518 91 484 8.38e-61 208
Msa0475400 AT4G01990.1 27.865 445 313 4 76 518 59 497 8.30e-57 197
Msa0475400 AT5G09450.1 31.105 344 232 4 55 395 53 394 8.39e-56 192
Msa0475400 AT2G20710.2 30.946 349 236 4 115 462 1 345 4.30e-48 171
Msa0475400 AT1G28020.1 30.675 326 214 4 74 393 53 372 5.18e-43 160
Msa0475400 AT1G80270.1 23.570 437 313 10 76 506 147 568 2.06e-28 119
Msa0475400 AT1G80270.3 23.570 437 313 10 76 506 147 568 2.06e-28 119
Msa0475400 AT1G80270.2 23.570 437 313 10 76 506 147 568 2.06e-28 119
Msa0475400 AT1G80270.5 23.570 437 313 10 76 506 147 568 2.06e-28 119
Msa0475400 AT1G80270.4 23.570 437 313 10 76 506 147 568 2.06e-28 119
Msa0475400 AT1G15480.1 22.146 438 322 9 76 508 145 568 1.19e-24 108
Msa0475400 AT3G11380.1 27.653 311 186 8 92 398 78 353 1.85e-20 95.1
Msa0475400 AT3G11380.1 32.044 181 114 4 72 243 360 540 8.00e-15 77.4
Msa0475400 AT3G15590.1 22.917 432 322 6 76 506 160 581 2.57e-20 95.1
Msa0475400 AT3G15590.2 22.917 432 322 6 76 506 160 581 2.57e-20 95.1
Msa0475400 AT1G28000.1 26.457 223 157 4 75 293 51 270 1.60e-18 88.2
Msa0475400 AT1G07590.1 21.711 456 349 6 68 519 76 527 1.09e-17 86.7
Msa0475400 AT1G43010.1 28.638 213 142 3 74 285 53 256 1.94e-17 82.8
Msa0475400 AT2G31400.2 25.000 268 197 3 160 426 270 534 1.94e-14 77.0
Msa0475400 AT2G31400.1 25.000 268 197 3 160 426 270 534 2.26e-14 76.6
Msa0475400 AT2G32630.1 24.014 279 189 7 158 426 294 559 3.89e-12 69.3
Msa0475400 AT3G06920.2 20.968 310 229 7 159 464 183 480 8.77e-12 68.6
Msa0475400 AT3G06920.3 20.968 310 229 7 159 464 183 480 8.77e-12 68.6
Msa0475400 AT3G06920.1 20.968 310 229 7 159 464 169 466 1.08e-11 68.2

Find 198 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTAATCCATTAGAATTTA+TGG 0.026049 3_3:+78584193 Msa0475400:three_prime_UTR
CATTGCCAGTGCTTCAAAAT+TGG 0.126495 3_3:+78582188 Msa0475400:CDS
GAGACTGTTTCCATTCTTAA+AGG 0.176026 3_3:+78584152 Msa0475400:CDS
ATTAGCCATAGCTGAATATT+TGG 0.185459 3_3:+78583959 Msa0475400:CDS
AATCATTGACCAGCTGAAAA+TGG 0.194638 3_3:-78584750 None:intergenic
AGTTTCATCATTTCATTATA+AGG 0.208074 3_3:-78583198 None:intergenic
TCTTCCACCAACTGCCTTAC+TGG 0.224446 3_3:-78583592 None:intergenic
CACTCACGTTACTAGGGTTC+TGG 0.230426 3_3:-78586903 Msa0475410:CDS
AGAGGGCCAAGGCGCGATTT+TGG 0.235373 3_3:-78586645 Msa0475410:CDS
CCATTCTCTGAAGATTCTTC+TGG 0.238798 3_3:-78583679 None:intergenic
ATGTAAACAACACGTGTATT+AGG 0.239103 3_3:-78584252 None:intergenic
GAAGACAGAGTATAAATTAA+TGG 0.266357 3_3:+78584790 Msa0475400:three_prime_UTR
ATTAATGGCTATCAAGCTTT+TGG 0.270529 3_3:+78584805 Msa0475400:three_prime_UTR
CATGAACGTCTCAGCTTTAC+TGG 0.276241 3_3:-78583136 None:intergenic
TAAAATCTTCTTCAACATAT+TGG 0.276929 3_3:+78586824 Msa0475400:three_prime_UTR
TTTGGTATATTTGTAGAATC+TGG 0.278988 3_3:+78584823 Msa0475400:three_prime_UTR
AATTTGCCGCTAAATGTAAA+TGG 0.286570 3_3:-78581887 None:intergenic
AAATATTCACCTCATGAAAA+AGG 0.287129 3_3:-78584321 None:intergenic
TCGCGCCTTGGCCCTCTCAT+AGG 0.290203 3_3:+78586651 Msa0475400:three_prime_UTR
AAGTGGGCTCTTGAACTAAA+AGG 0.296086 3_3:-78586856 Msa0475410:CDS
ATCACAGATATTCATAATTT+AGG 0.309949 3_3:+78584017 Msa0475400:CDS
ATTTCCCACGTCTTGTAGTT+TGG 0.313223 3_3:-78583825 None:intergenic
TTTGGATTTGATGAGCCTTC+TGG 0.315146 3_3:-78582257 None:intergenic
AATGATCAATAAAGACAAAA+TGG 0.322417 3_3:+78584118 Msa0475400:CDS
GGAGACTCACTCACGTTACT+AGG 0.328682 3_3:-78586910 Msa0475410:CDS
CTGCGAAGAGAAGAAGTATA+TGG 0.336111 3_3:-78582040 None:intergenic
GTTTCATCATTTCATTATAA+GGG 0.337687 3_3:-78583197 None:intergenic
CATGTTCAAGCTGAAGTGTT+TGG 0.351636 3_3:+78584272 Msa0475400:three_prime_UTR
GATATTCATAATTTAGGTCT+TGG 0.351730 3_3:+78584023 Msa0475400:CDS
GACATCTTCATCAGCTTAAG+AGG 0.360365 3_3:-78585931 Msa0475410:exon
GGCGTGCATTCTTTGATAAC+AGG 0.364374 3_3:+78586002 Msa0475400:three_prime_UTR
AATCACTAGTGATTCTGATA+TGG 0.369693 3_3:+78586726 Msa0475400:three_prime_UTR
TGTGATGAGGGAGAGCGATA+TGG 0.373547 3_3:+78583327 Msa0475400:CDS
GGCAATGGAGTTTGCGTTGA+AGG 0.373565 3_3:-78582172 None:intergenic
ACAGGTACCTTCTTATAAAC+AGG 0.378107 3_3:+78586769 Msa0475400:three_prime_UTR
AAATGATGAGAATGTTGAAA+TGG 0.383490 3_3:+78583386 Msa0475400:CDS
CCCAGTGAAGCCTTTAAGAA+TGG 0.389532 3_3:-78584162 None:intergenic
GAGCAATCCATAAATTCTAA+TGG 0.389560 3_3:-78584200 None:intergenic
GGCTTTGCTGATATTGCTGT+TGG 0.390337 3_3:-78586134 Msa0475410:CDS
ATGTTCTGTCTTACAACCTT+TGG 0.391181 3_3:+78583295 Msa0475400:CDS
TTCCCTCAAGTCCACTTTCA+AGG 0.391350 3_3:+78586183 Msa0475400:three_prime_UTR
ATTGCCAGTGCTTCAAAATT+GGG 0.393171 3_3:+78582189 Msa0475400:CDS
CATGGAGAAGCTCTATGAAC+TGG 0.396411 3_3:+78583155 Msa0475400:CDS
TATTGCCATGAAAAGAGCTT+TGG 0.402179 3_3:+78583893 Msa0475400:CDS
CACTTGACCCTCAGGACAAA+TGG 0.402811 3_3:+78586874 Msa0475400:three_prime_UTR
AACTTCAGAGCATGATCAGC+TGG 0.404901 3_3:-78582988 None:intergenic
TGTAAACAACACGTGTATTA+GGG 0.404953 3_3:-78584251 None:intergenic
GGCTAAATTCGCCGATGATA+AGG 0.406052 3_3:-78586623 Msa0475410:intron
TCCATTCTTAAAGGCTTCAC+TGG 0.406952 3_3:+78584161 Msa0475400:CDS
TAACAAGCTTGGTGAAGCTT+GGG 0.412299 3_3:+78583643 Msa0475400:CDS
CTTAAAGGCTTCACTGGGTA+AGG 0.413189 3_3:+78584167 Msa0475400:CDS
ATCCTTGAAAGTGGACTTGA+GGG 0.416245 3_3:-78586185 Msa0475410:CDS
CCATGGACTCTGTATCAATC+AGG 0.416951 3_3:+78586063 Msa0475400:three_prime_UTR
CTTGAGGGAAGGCGCTACTT+TGG 0.416974 3_3:-78586170 Msa0475410:CDS
AGGAGGGAGTCTTGCGGCTG+TGG 0.422261 3_3:+78583565 Msa0475400:CDS
TAGAGTATGTTGATGAGATC+TGG 0.424571 3_3:-78586702 Msa0475410:CDS
GCTTTCTTTCCAGCTGAGTC+AGG 0.427827 3_3:-78583069 None:intergenic
CAGTAAAGCTGAGACGTTCA+TGG 0.430914 3_3:+78583137 Msa0475400:CDS
TCATTGAAGGATATGTCAAT+TGG 0.432642 3_3:+78583850 Msa0475400:CDS
TTTGCACACAGGTATTCAAC+TGG 0.435844 3_3:+78582935 Msa0475400:intron
GAATGCGTGATTGTAGCGTT+TGG 0.439592 3_3:-78582275 None:intergenic
TGTTAGTATGCAAATATAGT+TGG 0.439822 3_3:-78583625 None:intergenic
TACTTTGGAGGTGAAAATAT+AGG 0.440103 3_3:-78586155 Msa0475410:CDS
ATAACATTTGTTAGAGAACT+AGG 0.446766 3_3:-78586974 Msa0475410:five_prime_UTR
CCAGAAGAATCTTCAGAGAA+TGG 0.455350 3_3:+78583679 Msa0475400:CDS
GTGATGAGGGAGAGCGATAT+GGG 0.460171 3_3:+78583328 Msa0475400:CDS
ATCATTGACCAGCTGAAAAT+GGG 0.460791 3_3:-78584749 None:intergenic
ACATGTAGACAGTTTCTCTT+CGG 0.461851 3_3:-78583490 None:intergenic
TTACCGTCATGCACAAGAAC+AGG 0.465185 3_3:+78586751 Msa0475400:three_prime_UTR
CCAGCTGAAAATGGGACAAT+TGG 0.466279 3_3:-78584741 None:intergenic
AATGATGAGAATGTTGAAAT+GGG 0.468069 3_3:+78583387 Msa0475400:CDS
CGCGCCTTGGCCCTCTCATA+GGG 0.469964 3_3:+78586652 Msa0475400:three_prime_UTR
AGCTGATCATGCTCTGAAGT+TGG 0.470813 3_3:+78582990 Msa0475400:CDS
GCCACGTAGAAGTGGGAGAT+AGG 0.471094 3_3:-78583094 None:intergenic
AGTGGGCTCTTGAACTAAAA+GGG 0.471204 3_3:-78586855 Msa0475410:CDS
CTAACAAGCTTGGTGAAGCT+TGG 0.471247 3_3:+78583642 Msa0475400:CDS
CAGAAGAATCTTCAGAGAAT+GGG 0.472581 3_3:+78583680 Msa0475400:CDS
ACTCACGTTACTAGGGTTCT+GGG 0.475091 3_3:-78586902 Msa0475410:CDS
CTGAATATTTGGAGAAATGT+GGG 0.476542 3_3:+78583970 Msa0475400:CDS
GGATAACTAGGGGTACCTTT+CGG 0.478712 3_3:-78583242 None:intergenic
GAAGGAGGAAAAGCTGCAAT+TGG 0.478844 3_3:+78584871 Msa0475400:three_prime_UTR
GCGGCTGTGGGAAGCCAGTA+AGG 0.479826 3_3:+78583578 Msa0475400:CDS
TGCGAAGAGAAGAAGTATAT+GGG 0.480978 3_3:-78582039 None:intergenic
GTATCACGGCGGTGAGAGAT+TGG 0.481133 3_3:-78581979 None:intergenic
GTTGTAAGACAGAACATTCA+AGG 0.484662 3_3:-78583289 None:intergenic
GAGGGAAGGCGCTACTTTGG+AGG 0.487384 3_3:-78586167 Msa0475410:CDS
GCTTTGCTGATATTGCTGTT+GGG 0.489214 3_3:-78586133 Msa0475410:CDS
ACTTTCTCATTTAGCAAGCA+AGG 0.492033 3_3:+78581855 Msa0475400:five_prime_UTR
CAAGAGCCCACTTGACCCTC+AGG 0.492284 3_3:+78586866 Msa0475400:three_prime_UTR
CTATGTTGAAAGACTGCCAT+TGG 0.497964 3_3:+78583916 Msa0475400:CDS
CCACTTCTACGTGGCTATGT+AGG 0.500824 3_3:+78583102 Msa0475400:CDS
GTTTAACCATTTACATTTAG+CGG 0.503561 3_3:+78581881 Msa0475400:five_prime_UTR
ATACGCCTCTTTGAAGCAAA+AGG 0.504517 3_3:+78583545 Msa0475400:CDS
ATATGTCAATTGGCAAAAGA+TGG 0.504962 3_3:+78583860 Msa0475400:CDS
ACGTGGGAAATTCTCATTGA+AGG 0.506864 3_3:+78583837 Msa0475400:CDS
TTCTTTGTGGCGGCCTCCAA+TGG 0.509216 3_3:-78583932 None:intergenic
GCCAATGTGTATATGAAAGC+AGG 0.509662 3_3:+78583432 Msa0475400:CDS
ATGGCTAATACAATTCTTTG+TGG 0.512455 3_3:-78583945 None:intergenic
CTTCAAAATTGGGTCGATCA+AGG 0.514502 3_3:+78582199 Msa0475400:CDS
ACACGTTGAATCTGCCGTGA+AGG 0.517519 3_3:+78581918 Msa0475400:five_prime_UTR
TTTCTCCAAATATTCAGCTA+TGG 0.517860 3_3:-78583964 None:intergenic
TCTGCCGTGAAGGGCTTCAT+CGG 0.518815 3_3:+78581928 Msa0475400:five_prime_UTR
ATGCGTATACCTGACTCAGC+TGG 0.523390 3_3:+78583060 Msa0475400:CDS
GGGTAGTCCATTTGTCCTGA+GGG 0.524592 3_3:-78586881 Msa0475410:CDS
CCATTCTTAAAGGCTTCACT+GGG 0.526110 3_3:+78584162 Msa0475400:CDS
GCGATATGGGGTTGCAGCAG+TGG 0.527736 3_3:+78583341 Msa0475400:CDS
GTCGCCGATGAAGCCCTTCA+CGG 0.527747 3_3:-78581932 None:intergenic
GCTGAATATTTGGAGAAATG+TGG 0.530476 3_3:+78583969 Msa0475400:CDS
CCTGATTGATACAGAGTCCA+TGG 0.533258 3_3:-78586063 Msa0475410:CDS
GTAGAATCTGGAAAAGAAGA+TGG 0.534042 3_3:+78584835 Msa0475400:three_prime_UTR
CACACAGGTATTCAACTGGA+TGG 0.535536 3_3:+78582939 Msa0475400:intron
AATTTGAAGATCCTTGAAAG+TGG 0.535582 3_3:-78586194 Msa0475410:CDS
TGGATGAGTGCTTGTGATGA+GGG 0.538983 3_3:+78583315 Msa0475400:CDS
ACGCTACAATCACGCATTCG+AGG 0.542785 3_3:+78582279 Msa0475400:CDS
GGGGTAGTCCATTTGTCCTG+AGG 0.544193 3_3:-78586882 Msa0475410:CDS
GTATAATCCTGTTTATAAGA+AGG 0.544339 3_3:-78586776 Msa0475410:CDS
TACGTGGCTATGTAGGAGAT+AGG 0.544359 3_3:+78583109 Msa0475400:CDS
CTCTCACCGCCGTGATACGA+CGG 0.545445 3_3:+78581984 Msa0475400:CDS
TTTAGCCCAAAATCGCGCCT+TGG 0.545817 3_3:+78586639 Msa0475400:three_prime_UTR
AAGAAAGTCATCGAAGTAAG+TGG 0.546614 3_3:+78586031 Msa0475400:three_prime_UTR
CACGTTGAATCTGCCGTGAA+GGG 0.546834 3_3:+78581919 Msa0475400:five_prime_UTR
TGGTTCGCCATCTGAAGCTA+CGG 0.548716 3_3:-78581959 None:intergenic
CAATAAAGACAAAATGGAGA+TGG 0.549030 3_3:+78584124 Msa0475400:CDS
CATTTGTCCTGAGGGTCAAG+TGG 0.551709 3_3:-78586873 Msa0475410:CDS
AGGTAACAAGCTTTCATCAT+CGG 0.555005 3_3:+78582219 Msa0475400:CDS
TGTTGAAAGACTGCCATTGG+AGG 0.555843 3_3:+78583919 Msa0475400:CDS
TATTTGCATACTAACAAGCT+TGG 0.557592 3_3:+78583632 Msa0475400:CDS
ATGAGAATGTTGAAATGGGA+TGG 0.563565 3_3:+78583391 Msa0475400:CDS
CATTTAGCGGCAAATTTCTG+TGG 0.565338 3_3:+78581894 Msa0475400:five_prime_UTR
TCCTGCTTTCATATACACAT+TGG 0.565526 3_3:-78583433 None:intergenic
TTAGGAGCATATGTGCGGAA+TGG 0.567056 3_3:+78583747 Msa0475400:CDS
AACTAGGAATGAGAAAGAGC+AGG 0.568013 3_3:-78586958 Msa0475410:five_prime_UTR
GCATCTCCACACATTGCAGA+AGG 0.568052 3_3:+78583794 Msa0475400:CDS
ATGGAGAAGCTCTATGAACT+GGG 0.568445 3_3:+78583156 Msa0475400:CDS
CTGTCTACATGTAATCGTCT+TGG 0.569357 3_3:+78583501 Msa0475400:CDS
CTTTCTCATTTAGCAAGCAA+GGG 0.570690 3_3:+78581856 Msa0475400:five_prime_UTR
CATGATCAGCTGGGTTTATG+CGG 0.572059 3_3:-78582978 None:intergenic
ATTTGTCCTGAGGGTCAAGT+GGG 0.573803 3_3:-78586872 Msa0475410:CDS
CGTGTCGTACCGTCGTATCA+CGG 0.574617 3_3:-78581993 None:intergenic
GCCCTCTCATAGGGATCATG+TGG 0.575393 3_3:+78586661 Msa0475400:three_prime_UTR
GAAGCCAGTAAGGCAGTTGG+TGG 0.575582 3_3:+78583588 Msa0475400:CDS
TAGGGATCATGTGGAAGAAG+AGG 0.575719 3_3:+78586670 Msa0475400:three_prime_UTR
GCTCTATGAACTGGGGCTAG+TGG 0.575872 3_3:+78583164 Msa0475400:CDS
CGCCTCTTTGAAGCAAAAGG+AGG 0.583122 3_3:+78583548 Msa0475400:CDS
GAGACTCACTCACGTTACTA+GGG 0.583299 3_3:-78586909 Msa0475410:CDS
TTGGATGAGTGCTTGTGATG+AGG 0.583463 3_3:+78583314 Msa0475400:CDS
GACGCCGCCGTAGCTTCAGA+TGG 0.583823 3_3:+78581952 Msa0475400:exon
CCTACATAGCCACGTAGAAG+TGG 0.584375 3_3:-78583102 None:intergenic
ACTTCAGAGCATGATCAGCT+GGG 0.585003 3_3:-78582987 None:intergenic
GATCCTTGAAAGTGGACTTG+AGG 0.587591 3_3:-78586186 Msa0475410:CDS
GTAAGTGGTAAGTTTAGCCA+TGG 0.594981 3_3:+78586046 Msa0475400:three_prime_UTR
AACTGAGATGCATCTCCAGA+AGG 0.596914 3_3:+78582242 Msa0475400:CDS
ACGTGGCTATGTAGGAGATA+GGG 0.597576 3_3:+78583110 Msa0475400:CDS
GGAGGGAGTCTTGCGGCTGT+GGG 0.599301 3_3:+78583566 Msa0475400:CDS
AATAGGAGAGGAACAACAGA+AGG 0.601970 3_3:-78586237 Msa0475410:CDS
CATCACAAGCACTCATCCAA+AGG 0.605501 3_3:-78583311 None:intergenic
TTTATTTGTTGGATAACTAG+GGG 0.607266 3_3:-78583252 None:intergenic
GCTAATACAATTCTTTGTGG+CGG 0.610024 3_3:-78583942 None:intergenic
AGCCACCCTTCTGCAATGTG+TGG 0.612657 3_3:-78583800 None:intergenic
GCCTCTTTGAAGCAAAAGGA+GGG 0.615558 3_3:+78583549 Msa0475400:CDS
TCCACATGATCCCTATGAGA+GGG 0.621697 3_3:-78586662 Msa0475410:CDS
GTTCAAGCTGAAGTGTTTGG+AGG 0.622053 3_3:+78584275 Msa0475400:three_prime_UTR
GATGGTCACCAACCAACTGA+AGG 0.622078 3_3:+78584853 Msa0475400:three_prime_UTR
ATGAAGATGTCAAGACCTTG+TGG 0.622264 3_3:+78585943 Msa0475400:three_prime_UTR
AACAAGCTTGGTGAAGCTTG+GGG 0.626479 3_3:+78583644 Msa0475400:CDS
TGGGAAGCCAGTAAGGCAGT+TGG 0.629575 3_3:+78583585 Msa0475400:CDS
CATCTCCACACATTGCAGAA+GGG 0.629974 3_3:+78583795 Msa0475400:CDS
GTGGGCTCTTGAACTAAAAG+GGG 0.630143 3_3:-78586854 Msa0475410:CDS
TTCCACATGATCCCTATGAG+AGG 0.630417 3_3:-78586663 Msa0475410:CDS
CTCCACACATTGCAGAAGGG+TGG 0.631048 3_3:+78583798 Msa0475400:CDS
TTGTAAGACAGAACATTCAA+GGG 0.631305 3_3:-78583288 None:intergenic
CTACATAGCCACGTAGAAGT+GGG 0.632992 3_3:-78583101 None:intergenic
GGTCACCAACCAACTGAAGG+AGG 0.633472 3_3:+78584856 Msa0475400:three_prime_UTR
TTGAAAGTGGACTTGAGGGA+AGG 0.636293 3_3:-78586181 Msa0475410:CDS
GCTGTCCAAACTACAAGACG+TGG 0.636885 3_3:+78583820 Msa0475400:CDS
TACCTTTCGGTACTCACATG+TGG 0.641449 3_3:-78583229 None:intergenic
GCACAGCAAGGCCTTCCACA+AGG 0.644456 3_3:-78585958 Msa0475410:CDS
AGATGTCAAGACCTTGTGGA+AGG 0.645290 3_3:+78585947 Msa0475400:three_prime_UTR
CTCACGTTACTAGGGTTCTG+GGG 0.648274 3_3:-78586901 Msa0475410:CDS
TCAAGTAACTTATCATGAGA+CGG 0.652385 3_3:+78585981 Msa0475400:three_prime_UTR
TGATCCCTATGAGAGGGCCA+AGG 0.658261 3_3:-78586656 Msa0475410:CDS
CAATTGGCAAAAGATGGATG+AGG 0.660417 3_3:+78583866 Msa0475400:CDS
ACGTAGAAGTGGGAGATAGG+CGG 0.666086 3_3:-78583091 None:intergenic
AAGGTGGTTCTTGAGCAGAA+AGG 0.666643 3_3:-78584082 None:intergenic
GCGAAGAGAAGAAGTATATG+GGG 0.666763 3_3:-78582038 None:intergenic
AGCAAAAGGAGGGAGTCTTG+CGG 0.669308 3_3:+78583559 Msa0475400:CDS
TAAGTTACTTGAGCACAGCA+AGG 0.675812 3_3:-78585970 Msa0475410:CDS
TTCGCCATCTGAAGCTACGG+CGG 0.675999 3_3:-78581956 None:intergenic
TGCCACATGTGAGTACCGAA+AGG 0.679332 3_3:+78583227 Msa0475400:CDS
GTACCTGTTCTTGTGCATGA+CGG 0.690851 3_3:-78586754 Msa0475410:CDS
GCCTATCTCCCACTTCTACG+TGG 0.702332 3_3:+78583093 Msa0475400:CDS
TGGAGAAGCTCTATGAACTG+GGG 0.707353 3_3:+78583157 Msa0475400:CDS
CGAGTGATAGAAGAAACTGT+AGG 0.708991 3_3:-78586092 Msa0475410:CDS
CTGTCCAAACTACAAGACGT+GGG 0.720216 3_3:+78583821 Msa0475400:CDS
TAGAAGTGCGAGAATCTGCG+TGG 0.736054 3_3:-78582102 None:intergenic
TGATGAGGGAGAGCGATATG+GGG 0.743042 3_3:+78583329 Msa0475400:CDS
AGAAGTGCGAGAATCTGCGT+GGG 0.746371 3_3:-78582101 None:intergenic
GTCGTACCGTCGTATCACGG+CGG 0.782153 3_3:-78581990 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTTATTAATTCAGTA+CGG + chr3_3:78584616-78584635 Msa0475400:intron 10.0%
!!! ATATTTATTTTCCTTTTACA+TGG + chr3_3:78585524-78585543 Msa0475400:intron 15.0%
!!! TATTTATTTTCCTTTTACAT+GGG + chr3_3:78585525-78585544 Msa0475400:intron 15.0%
!!! TATATTATTTTCCTTTATCA+TGG + chr3_3:78585581-78585600 Msa0475400:intron 15.0%
!! ATAGAATACTATAATATCAA+GGG - chr3_3:78585620-78585639 Msa0475410:three_prime_UTR 15.0%
!! TTGATATTATAGTATTCTAT+GGG + chr3_3:78585620-78585639 Msa0475400:intron 15.0%
!!! CTTGTAAAAGTAATTTTAAT+GGG - chr3_3:78585677-78585696 Msa0475410:three_prime_UTR 15.0%
!!! TCTTGTAAAAGTAATTTTAA+TGG - chr3_3:78585678-78585697 Msa0475410:three_prime_UTR 15.0%
!! TATAACATATTGTATTGTAT+AGG + chr3_3:78585898-78585917 Msa0475400:intron 15.0%
!!! TGATGATGTACTTTTTATTT+TGG + chr3_3:78582625-78582644 Msa0475400:intron 20.0%
!! GTTTCATCATTTCATTATAA+GGG - chr3_3:78583200-78583219 None:intergenic 20.0%
!! AGTTTCATCATTTCATTATA+AGG - chr3_3:78583201-78583220 None:intergenic 20.0%
!!! TTTTATTTGTTGGATAACTA+GGG - chr3_3:78583256-78583275 None:intergenic 20.0%
!!! CTTTATTTCGTTTTATTTGT+TGG - chr3_3:78583266-78583285 None:intergenic 20.0%
!! ATCACAGATATTCATAATTT+AGG + chr3_3:78584017-78584036 Msa0475400:CDS 20.0%
!!! TGTCTTTATTGATCATTTTA+AGG - chr3_3:78584115-78584134 None:intergenic 20.0%
!! AATGATCAATAAAGACAAAA+TGG + chr3_3:78584118-78584137 Msa0475400:CDS 20.0%
!! ATCTAATCCATTAGAATTTA+TGG + chr3_3:78584193-78584212 Msa0475400:three_prime_UTR 20.0%
!!! TTTCTATGATTTTGAAAACT+GGG - chr3_3:78584585-78584604 None:intergenic 20.0%
!! GTTAACAATAACATAAATCT+TGG + chr3_3:78584638-78584657 Msa0475400:intron 20.0%
!! TAAAAAAGAATGTTAGGAAT+AGG - chr3_3:78584717-78584736 None:intergenic 20.0%
!!! TGAATTTAATGAAGTTTTGA+AGG + chr3_3:78585159-78585178 Msa0475400:intron 20.0%
!! CATAGAATACTATAATATCA+AGG - chr3_3:78585621-78585640 Msa0475410:three_prime_UTR 20.0%
!! CTTGATATTATAGTATTCTA+TGG + chr3_3:78585619-78585638 Msa0475400:intron 20.0%
!! TGATATTATAGTATTCTATG+GGG + chr3_3:78585621-78585640 Msa0475400:intron 20.0%
!! ATTAACATATTGCATGATAT+TGG + chr3_3:78585816-78585835 Msa0475400:intron 20.0%
!!! CTTTTGAGTAATAGTTTAAT+TGG + chr3_3:78586443-78586462 Msa0475400:intron 20.0%
!!! AATATGTTGAAGAAGATTTT+AGG - chr3_3:78586825-78586844 Msa0475410:CDS 20.0%
!! TAAAATCTTCTTCAACATAT+TGG + chr3_3:78586824-78586843 Msa0475400:three_prime_UTR 20.0%
!! TGTTTGATTAAAAGCAAAAA+TGG - chr3_3:78586938-78586957 Msa0475410:exon 20.0%
! GTTTAACCATTTACATTTAG+CGG + chr3_3:78581881-78581900 Msa0475400:five_prime_UTR 25.0%
!!! AGTTCTAAAGTAGTTAATTG+TGG + chr3_3:78582353-78582372 Msa0475400:intron 25.0%
! AGTAGTAAATGAAAATGACA+AGG + chr3_3:78582450-78582469 Msa0475400:intron 25.0%
! GTAGTAAATGAAAATGACAA+GGG + chr3_3:78582451-78582470 Msa0475400:intron 25.0%
!!! ATTTAGTTTGTTGCTTATGT+TGG + chr3_3:78582555-78582574 Msa0475400:intron 25.0%
!!! TGTTTAGCTTATGCTTTTAT+AGG + chr3_3:78582583-78582602 Msa0475400:intron 25.0%
!!! TGATGTACTTTTTATTTTGG+AGG + chr3_3:78582628-78582647 Msa0475400:intron 25.0%
! TGTTATTGCAATGTGATTTA+TGG + chr3_3:78582856-78582875 Msa0475400:intron 25.0%
! GTTATTGCAATGTGATTTAT+GGG + chr3_3:78582857-78582876 Msa0475400:intron 25.0%
!! TTAATTATTCTTTTGCACAC+AGG + chr3_3:78582924-78582943 Msa0475400:intron 25.0%
!! TTTATTTGTTGGATAACTAG+GGG - chr3_3:78583255-78583274 None:intergenic 25.0%
!!! GTTTTATTTGTTGGATAACT+AGG - chr3_3:78583257-78583276 None:intergenic 25.0%
! AAATGATGAGAATGTTGAAA+TGG + chr3_3:78583386-78583405 Msa0475400:CDS 25.0%
! AATGATGAGAATGTTGAAAT+GGG + chr3_3:78583387-78583406 Msa0475400:CDS 25.0%
! TGTTAGTATGCAAATATAGT+TGG - chr3_3:78583628-78583647 None:intergenic 25.0%
! GATATTCATAATTTAGGTCT+TGG + chr3_3:78584023-78584042 Msa0475400:CDS 25.0%
!!! TATTGATCATTTTAAGGACA+TGG - chr3_3:78584109-78584128 None:intergenic 25.0%
! AAATATTCACCTCATGAAAA+AGG - chr3_3:78584324-78584343 None:intergenic 25.0%
!!! CTGCTAGTCTTTATAAAAAT+GGG - chr3_3:78584465-78584484 None:intergenic 25.0%
!! ATTTTTCTGTGTAGTTAAGA+AGG + chr3_3:78584516-78584535 Msa0475400:intron 25.0%
!!! GTTTCTATGATTTTGAAAAC+TGG - chr3_3:78584586-78584605 None:intergenic 25.0%
! AATCAACAAAGATAAAGAAG+TGG - chr3_3:78584688-78584707 None:intergenic 25.0%
! ACTTCTTTATCTTTGTTGAT+TGG + chr3_3:78584687-78584706 Msa0475400:intron 25.0%
! GAAGACAGAGTATAAATTAA+TGG + chr3_3:78584790-78584809 Msa0475400:three_prime_UTR 25.0%
! TTTGGTATATTTGTAGAATC+TGG + chr3_3:78584823-78584842 Msa0475400:three_prime_UTR 25.0%
! AAAATAGACGAGTAAACAAA+AGG - chr3_3:78584925-78584944 None:intergenic 25.0%
! AACATATAGAGTATGTTTAG+TGG - chr3_3:78585312-78585331 None:intergenic 25.0%
! CTAAATCATAAATGACTCTT+GGG - chr3_3:78585489-78585508 None:intergenic 25.0%
! ACTAAATCATAAATGACTCT+TGG - chr3_3:78585490-78585509 None:intergenic 25.0%
! TCATTTATGATTTAGTGAGA+AGG + chr3_3:78585494-78585513 Msa0475400:intron 25.0%
! TAATGATTCTTCCATGATAA+AGG - chr3_3:78585595-78585614 None:intergenic 25.0%
! TAACGTCTTGATTAAATAAG+CGG + chr3_3:78585648-78585667 Msa0475400:intron 25.0%
!!! TGTGTTTACATGATTAGTTT+AGG + chr3_3:78585722-78585741 Msa0475400:intron 25.0%
!!! ATAGCTACCTTTTTCAAAAT+AGG - chr3_3:78586257-78586276 Msa0475410:CDS 25.0%
! GTATAATCCTGTTTATAAGA+AGG - chr3_3:78586779-78586798 Msa0475410:CDS 25.0%
AATTTGCCGCTAAATGTAAA+TGG - chr3_3:78581890-78581909 None:intergenic 30.0%
!! ATTACTAGCTTTAGCCATAT+AGG + chr3_3:78582379-78582398 Msa0475400:intron 30.0%
!! TTACTAGCTTTAGCCATATA+GGG + chr3_3:78582380-78582399 Msa0475400:intron 30.0%
ACAGAAATTCAACAGAGAAA+TGG - chr3_3:78582490-78582509 None:intergenic 30.0%
ATTTCCAAAAAACCTTCAAG+CGG - chr3_3:78582525-78582544 None:intergenic 30.0%
GCTATAGTGAAGTGATTATA+AGG - chr3_3:78582732-78582751 None:intergenic 30.0%
AAGCTGTAATCAATCCATAA+TGG - chr3_3:78582786-78582805 None:intergenic 30.0%
AAGATACTGTAACTGATCAT+CGG + chr3_3:78582811-78582830 Msa0475400:intron 30.0%
AGTTAATCGCTAAAAACTGT+GGG + chr3_3:78583013-78583032 Msa0475400:CDS 30.0%
TTGTAAGACAGAACATTCAA+GGG - chr3_3:78583291-78583310 None:intergenic 30.0%
!!! GGCATTTTTTAGAACTAGAA+TGG - chr3_3:78583472-78583491 None:intergenic 30.0%
TATTTGCATACTAACAAGCT+TGG + chr3_3:78583632-78583651 Msa0475400:CDS 30.0%
! AGAGTCTCTAATGTTCTTTT+AGG + chr3_3:78583729-78583748 Msa0475400:CDS 30.0%
TCATTGAAGGATATGTCAAT+TGG + chr3_3:78583850-78583869 Msa0475400:CDS 30.0%
ATATGTCAATTGGCAAAAGA+TGG + chr3_3:78583860-78583879 Msa0475400:CDS 30.0%
ATGGCTAATACAATTCTTTG+TGG - chr3_3:78583948-78583967 None:intergenic 30.0%
ATTAGCCATAGCTGAATATT+TGG + chr3_3:78583959-78583978 Msa0475400:CDS 30.0%
TTTCTCCAAATATTCAGCTA+TGG - chr3_3:78583967-78583986 None:intergenic 30.0%
CTGAATATTTGGAGAAATGT+GGG + chr3_3:78583970-78583989 Msa0475400:CDS 30.0%
!! ATCATTTTAAGGACATGGAA+AGG - chr3_3:78584104-78584123 None:intergenic 30.0%
CAATAAAGACAAAATGGAGA+TGG + chr3_3:78584124-78584143 Msa0475400:CDS 30.0%
GAGCAATCCATAAATTCTAA+TGG - chr3_3:78584203-78584222 None:intergenic 30.0%
TGTAAACAACACGTGTATTA+GGG - chr3_3:78584254-78584273 None:intergenic 30.0%
ATGTAAACAACACGTGTATT+AGG - chr3_3:78584255-78584274 None:intergenic 30.0%
! TATGTGATAATGTTGCACTT+TGG - chr3_3:78584418-78584437 None:intergenic 30.0%
!! GCTGCTAGTCTTTATAAAAA+TGG - chr3_3:78584466-78584485 None:intergenic 30.0%
!!! TGGTGATTTTAGTTGAATAG+TGG + chr3_3:78584658-78584677 Msa0475400:intron 30.0%
GGCTGATAAAAAAGAATGTT+AGG - chr3_3:78584723-78584742 None:intergenic 30.0%
! ATTAATGGCTATCAAGCTTT+TGG + chr3_3:78584805-78584824 Msa0475400:three_prime_UTR 30.0%
!! ACGAGTAAACAAAAGGTATT+GGG - chr3_3:78584918-78584937 None:intergenic 30.0%
TAGGTGAAAAATTCAAACCT+CGG + chr3_3:78585128-78585147 Msa0475400:intron 30.0%
TTAAATTCAAAACTGTACCG+AGG - chr3_3:78585148-78585167 None:intergenic 30.0%
AACATAAAGGCTAATAGACA+TGG - chr3_3:78585389-78585408 None:intergenic 30.0%
TATTCTATCTCCCATGTAAA+AGG - chr3_3:78585538-78585557 None:intergenic 30.0%
GATGTGTGTGTATGATATAT+GGG - chr3_3:78585851-78585870 Msa0475410:three_prime_UTR 30.0%
TGATGTGTGTGTATGATATA+TGG - chr3_3:78585852-78585871 Msa0475410:three_prime_UTR 30.0%
CATATTGTATTGTATAGGTG+TGG + chr3_3:78585903-78585922 Msa0475400:intron 30.0%
TCAAGTAACTTATCATGAGA+CGG + chr3_3:78585981-78586000 Msa0475400:three_prime_UTR 30.0%
! TACTTTGGAGGTGAAAATAT+AGG - chr3_3:78586158-78586177 Msa0475410:CDS 30.0%
AATTTGAAGATCCTTGAAAG+TGG - chr3_3:78586197-78586216 Msa0475410:CDS 30.0%
!! TTCCTCTCCTATTTTGAAAA+AGG + chr3_3:78586247-78586266 Msa0475400:three_prime_UTR 30.0%
!!! TACCTTTTTCAAAATAGGAG+AGG - chr3_3:78586252-78586271 Msa0475410:CDS 30.0%
AAAAAGGTAGCTATAAATGC+TGG + chr3_3:78586263-78586282 Msa0475400:three_prime_UTR 30.0%
!!! AAGGTTGGTTTTTGTATTAG+AGG + chr3_3:78586303-78586322 Msa0475400:intron 30.0%
! ATCATGTTCTTTAGAAGTCA+TGG + chr3_3:78586592-78586611 Msa0475400:intron 30.0%
! TGGCTTTTATACCTTATCAT+CGG + chr3_3:78586612-78586631 Msa0475400:intron 30.0%
AATCACTAGTGATTCTGATA+TGG + chr3_3:78586726-78586745 Msa0475400:three_prime_UTR 30.0%
TGATTAAAAGCAAAAATGGC+AGG - chr3_3:78586934-78586953 Msa0475410:exon 30.0%
ACTTTCTCATTTAGCAAGCA+AGG + chr3_3:78581855-78581874 Msa0475400:five_prime_UTR 35.0%
CTTTCTCATTTAGCAAGCAA+GGG + chr3_3:78581856-78581875 Msa0475400:five_prime_UTR 35.0%
! TGCGAAGAGAAGAAGTATAT+GGG - chr3_3:78582042-78582061 None:intergenic 35.0%
! AGCAGCATCAGTTTCTTTTT+GGG + chr3_3:78582061-78582080 Msa0475400:CDS 35.0%
ATTGCCAGTGCTTCAAAATT+GGG + chr3_3:78582189-78582208 Msa0475400:CDS 35.0%
AGGTAACAAGCTTTCATCAT+CGG + chr3_3:78582219-78582238 Msa0475400:CDS 35.0%
TTACATTCCTGCAATTTGTG+TGG + chr3_3:78582325-78582344 Msa0475400:intron 35.0%
CTTTAGCCATATAGGGTTTA+GGG + chr3_3:78582387-78582406 Msa0475400:intron 35.0%
CATAAACCCTAAACCCTATA+TGG - chr3_3:78582396-78582415 None:intergenic 35.0%
TTTCCAAAAAACCTTCAAGC+GGG - chr3_3:78582524-78582543 None:intergenic 35.0%
! CACTTCACTATAGCATTTTG+TGG + chr3_3:78582738-78582757 Msa0475400:intron 35.0%
!! TTTTGTGGATTAATCGCTTC+AGG + chr3_3:78582753-78582772 Msa0475400:intron 35.0%
! GGTTTATGCGGAATTTTTGT+TGG - chr3_3:78582969-78582988 None:intergenic 35.0%
GAGTTAATCGCTAAAAACTG+TGG + chr3_3:78583012-78583031 Msa0475400:CDS 35.0%
GTTGTAAGACAGAACATTCA+AGG - chr3_3:78583292-78583311 None:intergenic 35.0%
ATGTTCTGTCTTACAACCTT+TGG + chr3_3:78583295-78583314 Msa0475400:CDS 35.0%
ATGAGAATGTTGAAATGGGA+TGG + chr3_3:78583391-78583410 Msa0475400:CDS 35.0%
TCCTGCTTTCATATACACAT+TGG - chr3_3:78583436-78583455 None:intergenic 35.0%
ACATGTAGACAGTTTCTCTT+CGG - chr3_3:78583493-78583512 None:intergenic 35.0%
CAGAAGAATCTTCAGAGAAT+GGG + chr3_3:78583680-78583699 Msa0475400:CDS 35.0%
!! TTCTTTTAGGAGCATATGTG+CGG + chr3_3:78583742-78583761 Msa0475400:CDS 35.0%
TATTGCCATGAAAAGAGCTT+TGG + chr3_3:78583893-78583912 Msa0475400:CDS 35.0%
GCTAATACAATTCTTTGTGG+CGG - chr3_3:78583945-78583964 None:intergenic 35.0%
GCTGAATATTTGGAGAAATG+TGG + chr3_3:78583969-78583988 Msa0475400:CDS 35.0%
!! ATTTTAAGGACATGGAAAGG+TGG - chr3_3:78584101-78584120 None:intergenic 35.0%
GAGACTGTTTCCATTCTTAA+AGG + chr3_3:78584152-78584171 Msa0475400:CDS 35.0%
!! TGAAGTCAACCTTTTTCATG+AGG + chr3_3:78584312-78584331 Msa0475400:three_prime_UTR 35.0%
!! CTATGATTTTGAAAACTGGG+AGG - chr3_3:78584582-78584601 None:intergenic 35.0%
ATCATTGACCAGCTGAAAAT+GGG - chr3_3:78584752-78584771 None:intergenic 35.0%
AATCATTGACCAGCTGAAAA+TGG - chr3_3:78584753-78584772 None:intergenic 35.0%
GTAGAATCTGGAAAAGAAGA+TGG + chr3_3:78584835-78584854 Msa0475400:three_prime_UTR 35.0%
!! CGAGTAAACAAAAGGTATTG+GGG - chr3_3:78584917-78584936 None:intergenic 35.0%
! GACGAGTAAACAAAAGGTAT+TGG - chr3_3:78584919-78584938 None:intergenic 35.0%
TATACTTTCCCAGGTTAACA+GGG - chr3_3:78584993-78585012 None:intergenic 35.0%
ATATACTTTCCCAGGTTAAC+AGG - chr3_3:78584994-78585013 None:intergenic 35.0%
! TGTTAACCTGGGAAAGTATA+TGG + chr3_3:78584993-78585012 Msa0475400:intron 35.0%
! GTTAACCTGGGAAAGTATAT+GGG + chr3_3:78584994-78585013 Msa0475400:intron 35.0%
ATATTCCCATATACTTTCCC+AGG - chr3_3:78585002-78585021 None:intergenic 35.0%
GAGTATCTAGTCATCTAACA+CGG - chr3_3:78585090-78585109 None:intergenic 35.0%
TATAGCTAGCAATGAAGGTA+TGG - chr3_3:78585272-78585291 None:intergenic 35.0%
GAAGAGGAAACGAAACATAA+AGG - chr3_3:78585402-78585421 None:intergenic 35.0%
CATAAATGACTCTTGGGATA+AGG - chr3_3:78585483-78585502 None:intergenic 35.0%
! ATTAGTTTAGGTTTGAGCTC+AGG + chr3_3:78585734-78585753 Msa0475400:intron 35.0%
TGTGTGTATGATAATATGCG+TGG - chr3_3:78585781-78585800 Msa0475410:three_prime_UTR 35.0%
AAGAAAGTCATCGAAGTAAG+TGG + chr3_3:78586031-78586050 Msa0475400:three_prime_UTR 35.0%
!!! TGTTGGGTTTTTTGGATTCT+GGG - chr3_3:78586120-78586139 Msa0475410:CDS 35.0%
!!! GATATTGCTGTTGGGTTTTT+TGG - chr3_3:78586128-78586147 Msa0475410:CDS 35.0%
CACACTGAAATAGAAAAGGT+TGG + chr3_3:78586288-78586307 Msa0475400:intron 35.0%
!! TTGGTTTTTGTATTAGAGGC+TGG + chr3_3:78586307-78586326 Msa0475400:intron 35.0%
GATCAAACCAAACATCAAGT+TGG + chr3_3:78586536-78586555 Msa0475400:intron 35.0%
! TAGAGTATGTTGATGAGATC+TGG - chr3_3:78586705-78586724 Msa0475410:CDS 35.0%
ACAGGTACCTTCTTATAAAC+AGG + chr3_3:78586769-78586788 Msa0475400:three_prime_UTR 35.0%
CATTTAGCGGCAAATTTCTG+TGG + chr3_3:78581894-78581913 Msa0475400:five_prime_UTR 40.0%
! GCGAAGAGAAGAAGTATATG+GGG - chr3_3:78582041-78582060 None:intergenic 40.0%
! CTGCGAAGAGAAGAAGTATA+TGG - chr3_3:78582043-78582062 None:intergenic 40.0%
! CAGCAGCATCAGTTTCTTTT+TGG + chr3_3:78582060-78582079 Msa0475400:CDS 40.0%
!!! CAATTTTGAAGCACTGGCAA+TGG - chr3_3:78582190-78582209 None:intergenic 40.0%
CATTGCCAGTGCTTCAAAAT+TGG + chr3_3:78582188-78582207 Msa0475400:CDS 40.0%
CTTCAAAATTGGGTCGATCA+AGG + chr3_3:78582199-78582218 Msa0475400:CDS 40.0%
TTTGGATTTGATGAGCCTTC+TGG - chr3_3:78582260-78582279 None:intergenic 40.0%
GCTTTAGCCATATAGGGTTT+AGG + chr3_3:78582386-78582405 Msa0475400:intron 40.0%
! ATTTTCCTTTTCCCGCTTGA+AGG + chr3_3:78582510-78582529 Msa0475400:intron 40.0%
AAAAACCTTCAAGCGGGAAA+AGG - chr3_3:78582518-78582537 None:intergenic 40.0%
!!! TTTCCCGCTTGAAGGTTTTT+TGG + chr3_3:78582518-78582537 Msa0475400:intron 40.0%
GCTCAATACGCTGAACTTAA+AGG - chr3_3:78582681-78582700 None:intergenic 40.0%
! CTTCAGGCTACTTTCCATTA+TGG + chr3_3:78582769-78582788 Msa0475400:intron 40.0%
TTTGCACACAGGTATTCAAC+TGG + chr3_3:78582935-78582954 Msa0475400:intron 40.0%
ATGGAGAAGCTCTATGAACT+GGG + chr3_3:78583156-78583175 Msa0475400:CDS 40.0%
GCCAATGTGTATATGAAAGC+AGG + chr3_3:78583432-78583451 Msa0475400:CDS 40.0%
CTGTCTACATGTAATCGTCT+TGG + chr3_3:78583501-78583520 Msa0475400:CDS 40.0%
!! ATACGCCTCTTTGAAGCAAA+AGG + chr3_3:78583545-78583564 Msa0475400:CDS 40.0%
! TAACAAGCTTGGTGAAGCTT+GGG + chr3_3:78583643-78583662 Msa0475400:CDS 40.0%
! CCATTCTCTGAAGATTCTTC+TGG - chr3_3:78583682-78583701 None:intergenic 40.0%
CCAGAAGAATCTTCAGAGAA+TGG + chr3_3:78583679-78583698 Msa0475400:CDS 40.0%
ATTTCCCACGTCTTGTAGTT+TGG - chr3_3:78583828-78583847 None:intergenic 40.0%
ACGTGGGAAATTCTCATTGA+AGG + chr3_3:78583837-78583856 Msa0475400:CDS 40.0%
CAATTGGCAAAAGATGGATG+AGG + chr3_3:78583866-78583885 Msa0475400:CDS 40.0%
! CATAGCCAAAGCTCTTTTCA+TGG - chr3_3:78583901-78583920 None:intergenic 40.0%
CTATGTTGAAAGACTGCCAT+TGG + chr3_3:78583916-78583935 Msa0475400:CDS 40.0%
TCCATTCTTAAAGGCTTCAC+TGG + chr3_3:78584161-78584180 Msa0475400:CDS 40.0%
CCATTCTTAAAGGCTTCACT+GGG + chr3_3:78584162-78584181 Msa0475400:CDS 40.0%
! CATGTTCAAGCTGAAGTGTT+TGG + chr3_3:78584272-78584291 Msa0475400:three_prime_UTR 40.0%
TATCATCATGTTCTCACGGA+TGG - chr3_3:78584969-78584988 None:intergenic 40.0%
GGGTTATCATCATGTTCTCA+CGG - chr3_3:78584973-78584992 None:intergenic 40.0%
TGATGATAACCCTGTTAACC+TGG + chr3_3:78584981-78585000 Msa0475400:intron 40.0%
GATGATAACCCTGTTAACCT+GGG + chr3_3:78584982-78585001 Msa0475400:intron 40.0%
CATTCTCCATTTAGATTGCC+AGG + chr3_3:78585061-78585080 Msa0475400:intron 40.0%
! CATAAGGGCAGTTTTCTAAC+AGG - chr3_3:78585220-78585239 None:intergenic 40.0%
TCATCGCTACATCAGCATAA+GGG - chr3_3:78585235-78585254 None:intergenic 40.0%
ATCATCGCTACATCAGCATA+AGG - chr3_3:78585236-78585255 None:intergenic 40.0%
TTATGCTGATGTAGCGATGA+TGG + chr3_3:78585235-78585254 Msa0475400:intron 40.0%
CGTGATATAGCTAGCAATGA+AGG - chr3_3:78585277-78585296 None:intergenic 40.0%
ACATCGCAATTCAACTGAAG+AGG - chr3_3:78585418-78585437 None:intergenic 40.0%
! ATACTCTTCAGCCTTATCCA+AGG + chr3_3:78585448-78585467 Msa0475400:intron 40.0%
GACATCTTCATCAGCTTAAG+AGG - chr3_3:78585934-78585953 Msa0475410:exon 40.0%
ATGAAGATGTCAAGACCTTG+TGG + chr3_3:78585943-78585962 Msa0475400:three_prime_UTR 40.0%
TAAGTTACTTGAGCACAGCA+AGG - chr3_3:78585973-78585992 Msa0475410:CDS 40.0%
GTAAGTGGTAAGTTTAGCCA+TGG + chr3_3:78586046-78586065 Msa0475400:three_prime_UTR 40.0%
CGAGTGATAGAAGAAACTGT+AGG - chr3_3:78586095-78586114 Msa0475410:CDS 40.0%
!!! CTGTTGGGTTTTTTGGATTC+TGG - chr3_3:78586121-78586140 Msa0475410:CDS 40.0%
! GCTTTGCTGATATTGCTGTT+GGG - chr3_3:78586136-78586155 Msa0475410:CDS 40.0%
! ATCCTTGAAAGTGGACTTGA+GGG - chr3_3:78586188-78586207 Msa0475410:CDS 40.0%
AATAGGAGAGGAACAACAGA+AGG - chr3_3:78586240-78586259 Msa0475410:CDS 40.0%
GGCACACACTGAAATAGAAA+AGG + chr3_3:78586284-78586303 Msa0475400:intron 40.0%
AGTCTCAACATTTCGATCTC+TGG - chr3_3:78586425-78586444 Msa0475410:intron 40.0%
CCAGAAACCAACTTGATGTT+TGG - chr3_3:78586546-78586565 Msa0475410:intron 40.0%
!! CCAAACATCAAGTTGGTTTC+TGG + chr3_3:78586543-78586562 Msa0475400:intron 40.0%
GTTCAACCATTTGAACCAGA+CGG + chr3_3:78586565-78586584 Msa0475400:intron 40.0%
! ATCAAACCGTCTGGTTCAAA+TGG - chr3_3:78586574-78586593 Msa0475410:intron 40.0%
AAGAACATGATCAAACCGTC+TGG - chr3_3:78586583-78586602 Msa0475410:intron 40.0%
! AGTGGGCTCTTGAACTAAAA+GGG - chr3_3:78586858-78586877 Msa0475410:CDS 40.0%
! AAGTGGGCTCTTGAACTAAA+AGG - chr3_3:78586859-78586878 Msa0475410:CDS 40.0%
AACTAGGAATGAGAAAGAGC+AGG - chr3_3:78586961-78586980 Msa0475410:five_prime_UTR 40.0%
!!! TCGACCCAATTTTGAAGCAC+TGG - chr3_3:78582196-78582215 None:intergenic 45.0%
AACTGAGATGCATCTCCAGA+AGG + chr3_3:78582242-78582261 Msa0475400:CDS 45.0%
GAATGCGTGATTGTAGCGTT+TGG - chr3_3:78582278-78582297 None:intergenic 45.0%
ACAATCACGCATTCGAGGTT+CGG + chr3_3:78582284-78582303 Msa0475400:intron 45.0%
CTTCGAACCACACAAATTGC+AGG - chr3_3:78582335-78582354 None:intergenic 45.0%
CACACAGGTATTCAACTGGA+TGG + chr3_3:78582939-78582958 Msa0475400:intron 45.0%
CATGATCAGCTGGGTTTATG+CGG - chr3_3:78582981-78583000 None:intergenic 45.0%
ACTTCAGAGCATGATCAGCT+GGG - chr3_3:78582990-78583009 None:intergenic 45.0%
AACTTCAGAGCATGATCAGC+TGG - chr3_3:78582991-78583010 None:intergenic 45.0%
!! AGCTGATCATGCTCTGAAGT+TGG + chr3_3:78582990-78583009 Msa0475400:CDS 45.0%
! CGCTAAAAACTGTGGGCTAA+TGG + chr3_3:78583020-78583039 Msa0475400:CDS 45.0%
CTACATAGCCACGTAGAAGT+GGG - chr3_3:78583104-78583123 None:intergenic 45.0%
TACGTGGCTATGTAGGAGAT+AGG + chr3_3:78583109-78583128 Msa0475400:CDS 45.0%
ACGTGGCTATGTAGGAGATA+GGG + chr3_3:78583110-78583129 Msa0475400:CDS 45.0%
CATGAACGTCTCAGCTTTAC+TGG - chr3_3:78583139-78583158 None:intergenic 45.0%
CAGTAAAGCTGAGACGTTCA+TGG + chr3_3:78583137-78583156 Msa0475400:CDS 45.0%
CATGGAGAAGCTCTATGAAC+TGG + chr3_3:78583155-78583174 Msa0475400:CDS 45.0%
TGGAGAAGCTCTATGAACTG+GGG + chr3_3:78583157-78583176 Msa0475400:CDS 45.0%
TACCTTTCGGTACTCACATG+TGG - chr3_3:78583232-78583251 None:intergenic 45.0%
!! GGATAACTAGGGGTACCTTT+CGG - chr3_3:78583245-78583264 None:intergenic 45.0%
CATCACAAGCACTCATCCAA+AGG - chr3_3:78583314-78583333 None:intergenic 45.0%
TTGGATGAGTGCTTGTGATG+AGG + chr3_3:78583314-78583333 Msa0475400:CDS 45.0%
TGGATGAGTGCTTGTGATGA+GGG + chr3_3:78583315-78583334 Msa0475400:CDS 45.0%
!! GCCTCTTTGAAGCAAAAGGA+GGG + chr3_3:78583549-78583568 Msa0475400:CDS 45.0%
! TCCCTCCTTTTGCTTCAAAG+AGG - chr3_3:78583553-78583572 None:intergenic 45.0%
! CTAACAAGCTTGGTGAAGCT+TGG + chr3_3:78583642-78583661 Msa0475400:CDS 45.0%
! AACAAGCTTGGTGAAGCTTG+GGG + chr3_3:78583644-78583663 Msa0475400:CDS 45.0%
! TTAGGAGCATATGTGCGGAA+TGG + chr3_3:78583747-78583766 Msa0475400:CDS 45.0%
CATCTCCACACATTGCAGAA+GGG + chr3_3:78583795-78583814 Msa0475400:CDS 45.0%
CTGTCCAAACTACAAGACGT+GGG + chr3_3:78583821-78583840 Msa0475400:CDS 45.0%
TGTTGAAAGACTGCCATTGG+AGG + chr3_3:78583919-78583938 Msa0475400:CDS 45.0%
AAGGTGGTTCTTGAGCAGAA+AGG - chr3_3:78584085-78584104 None:intergenic 45.0%
! CCCAGTGAAGCCTTTAAGAA+TGG - chr3_3:78584165-78584184 None:intergenic 45.0%
CTTAAAGGCTTCACTGGGTA+AGG + chr3_3:78584167-78584186 Msa0475400:CDS 45.0%
! GTTCAAGCTGAAGTGTTTGG+AGG + chr3_3:78584275-78584294 Msa0475400:three_prime_UTR 45.0%
CCAGCTGAAAATGGGACAAT+TGG - chr3_3:78584744-78584763 None:intergenic 45.0%
! CCAATTGTCCCATTTTCAGC+TGG + chr3_3:78584741-78584760 Msa0475400:three_prime_UTR 45.0%
! CTTTTCCTCCTTCAGTTGGT+TGG - chr3_3:78584864-78584883 None:intergenic 45.0%
GAAGGAGGAAAAGCTGCAAT+TGG + chr3_3:78584871-78584890 Msa0475400:three_prime_UTR 45.0%
ATACTCTCTACGCTGTCAAG+AGG + chr3_3:78585104-78585123 Msa0475400:intron 45.0%
TACTCTCTACGCTGTCAAGA+GGG + chr3_3:78585105-78585124 Msa0475400:intron 45.0%
GAGCTCAGGTTCGTGTTTAT+AGG + chr3_3:78585748-78585767 Msa0475400:intron 45.0%
AGATGTCAAGACCTTGTGGA+AGG + chr3_3:78585947-78585966 Msa0475400:three_prime_UTR 45.0%
! GGCGTGCATTCTTTGATAAC+AGG + chr3_3:78586002-78586021 Msa0475400:three_prime_UTR 45.0%
CCTGATTGATACAGAGTCCA+TGG - chr3_3:78586066-78586085 Msa0475410:CDS 45.0%
CCATGGACTCTGTATCAATC+AGG + chr3_3:78586063-78586082 Msa0475400:three_prime_UTR 45.0%
GGCTTTGCTGATATTGCTGT+TGG - chr3_3:78586137-78586156 Msa0475410:CDS 45.0%
! TTGAAAGTGGACTTGAGGGA+AGG - chr3_3:78586184-78586203 Msa0475410:CDS 45.0%
TTCCCTCAAGTCCACTTTCA+AGG + chr3_3:78586183-78586202 Msa0475400:three_prime_UTR 45.0%
! GATCCTTGAAAGTGGACTTG+AGG - chr3_3:78586189-78586208 Msa0475410:CDS 45.0%
GGCTAAATTCGCCGATGATA+AGG - chr3_3:78586626-78586645 Msa0475410:CDS 45.0%
TCCACATGATCCCTATGAGA+GGG - chr3_3:78586665-78586684 Msa0475410:CDS 45.0%
TTCCACATGATCCCTATGAG+AGG - chr3_3:78586666-78586685 Msa0475410:CDS 45.0%
TAGGGATCATGTGGAAGAAG+AGG + chr3_3:78586670-78586689 Msa0475400:three_prime_UTR 45.0%
TTACCGTCATGCACAAGAAC+AGG + chr3_3:78586751-78586770 Msa0475400:three_prime_UTR 45.0%
GTACCTGTTCTTGTGCATGA+CGG - chr3_3:78586757-78586776 Msa0475410:CDS 45.0%
GTGGGCTCTTGAACTAAAAG+GGG - chr3_3:78586857-78586876 Msa0475410:CDS 45.0%
ATTTGTCCTGAGGGTCAAGT+GGG - chr3_3:78586875-78586894 Msa0475410:CDS 45.0%
ACTCACGTTACTAGGGTTCT+GGG - chr3_3:78586905-78586924 Msa0475410:CDS 45.0%
GAGACTCACTCACGTTACTA+GGG - chr3_3:78586912-78586931 Msa0475410:CDS 45.0%
ACACGTTGAATCTGCCGTGA+AGG + chr3_3:78581918-78581937 Msa0475400:five_prime_UTR 50.0%
CACGTTGAATCTGCCGTGAA+GGG + chr3_3:78581919-78581938 Msa0475400:five_prime_UTR 50.0%
! TGGTTCGCCATCTGAAGCTA+CGG - chr3_3:78581962-78581981 None:intergenic 50.0%
! AGAAGTGCGAGAATCTGCGT+GGG - chr3_3:78582104-78582123 None:intergenic 50.0%
! TAGAAGTGCGAGAATCTGCG+TGG - chr3_3:78582105-78582124 None:intergenic 50.0%
GGCAATGGAGTTTGCGTTGA+AGG - chr3_3:78582175-78582194 None:intergenic 50.0%
ACGCTACAATCACGCATTCG+AGG + chr3_3:78582279-78582298 Msa0475400:CDS 50.0%
ATGCGTATACCTGACTCAGC+TGG + chr3_3:78583060-78583079 Msa0475400:CDS 50.0%
GCTTTCTTTCCAGCTGAGTC+AGG - chr3_3:78583072-78583091 None:intergenic 50.0%
ACGTAGAAGTGGGAGATAGG+CGG - chr3_3:78583094-78583113 None:intergenic 50.0%
CCTACATAGCCACGTAGAAG+TGG - chr3_3:78583105-78583124 None:intergenic 50.0%
CCACTTCTACGTGGCTATGT+AGG + chr3_3:78583102-78583121 Msa0475400:CDS 50.0%
!! TGCCACATGTGAGTACCGAA+AGG + chr3_3:78583227-78583246 Msa0475400:CDS 50.0%
TGTGATGAGGGAGAGCGATA+TGG + chr3_3:78583327-78583346 Msa0475400:CDS 50.0%
GTGATGAGGGAGAGCGATAT+GGG + chr3_3:78583328-78583347 Msa0475400:CDS 50.0%
TGATGAGGGAGAGCGATATG+GGG + chr3_3:78583329-78583348 Msa0475400:CDS 50.0%
!! CGCCTCTTTGAAGCAAAAGG+AGG + chr3_3:78583548-78583567 Msa0475400:CDS 50.0%
AGCAAAAGGAGGGAGTCTTG+CGG + chr3_3:78583559-78583578 Msa0475400:CDS 50.0%
TCTTCCACCAACTGCCTTAC+TGG - chr3_3:78583595-78583614 None:intergenic 50.0%
GCATCTCCACACATTGCAGA+AGG + chr3_3:78583794-78583813 Msa0475400:CDS 50.0%
GCTGTCCAAACTACAAGACG+TGG + chr3_3:78583820-78583839 Msa0475400:CDS 50.0%
GATGGTCACCAACCAACTGA+AGG + chr3_3:78584853-78584872 Msa0475400:three_prime_UTR 50.0%
! GCAGCTTTTCCTCCTTCAGT+TGG - chr3_3:78584868-78584887 None:intergenic 50.0%
CGGCAACCTGGCAATCTAAA+TGG - chr3_3:78585070-78585089 None:intergenic 50.0%
AGTCATCTAACACGGCAACC+TGG - chr3_3:78585082-78585101 None:intergenic 50.0%
! CTCTTCAGCCTTATCCAAGG+AGG + chr3_3:78585451-78585470 Msa0475400:intron 50.0%
GGATGTAGCCTCCTTGGATA+AGG - chr3_3:78585462-78585481 None:intergenic 50.0%
GGATAAGGATGTAGCCTCCT+TGG - chr3_3:78585468-78585487 None:intergenic 50.0%
TTTAGCCCAAAATCGCGCCT+TGG + chr3_3:78586639-78586658 Msa0475400:three_prime_UTR 50.0%
CATTTGTCCTGAGGGTCAAG+TGG - chr3_3:78586876-78586895 Msa0475410:CDS 50.0%
CACTTGACCCTCAGGACAAA+TGG + chr3_3:78586874-78586893 Msa0475400:three_prime_UTR 50.0%
GGGTAGTCCATTTGTCCTGA+GGG - chr3_3:78586884-78586903 Msa0475410:CDS 50.0%
CTCACGTTACTAGGGTTCTG+GGG - chr3_3:78586904-78586923 Msa0475410:CDS 50.0%
CACTCACGTTACTAGGGTTC+TGG - chr3_3:78586906-78586925 Msa0475410:CDS 50.0%
GGAGACTCACTCACGTTACT+AGG - chr3_3:78586913-78586932 Msa0475410:CDS 50.0%
TCTGCCGTGAAGGGCTTCAT+CGG + chr3_3:78581928-78581947 Msa0475400:five_prime_UTR 55.0%
! TTCGCCATCTGAAGCTACGG+CGG - chr3_3:78581959-78581978 None:intergenic 55.0%
GTATCACGGCGGTGAGAGAT+TGG - chr3_3:78581982-78582001 None:intergenic 55.0%
CGTGTCGTACCGTCGTATCA+CGG - chr3_3:78581996-78582015 None:intergenic 55.0%
GCCTATCTCCCACTTCTACG+TGG + chr3_3:78583093-78583112 Msa0475400:CDS 55.0%
GCCACGTAGAAGTGGGAGAT+AGG - chr3_3:78583097-78583116 None:intergenic 55.0%
GCTCTATGAACTGGGGCTAG+TGG + chr3_3:78583164-78583183 Msa0475400:CDS 55.0%
TGGGAAGCCAGTAAGGCAGT+TGG + chr3_3:78583585-78583604 Msa0475400:CDS 55.0%
GAAGCCAGTAAGGCAGTTGG+TGG + chr3_3:78583588-78583607 Msa0475400:CDS 55.0%
CTCCACACATTGCAGAAGGG+TGG + chr3_3:78583798-78583817 Msa0475400:CDS 55.0%
AGCCACCCTTCTGCAATGTG+TGG - chr3_3:78583803-78583822 None:intergenic 55.0%
TTCTTTGTGGCGGCCTCCAA+TGG - chr3_3:78583935-78583954 None:intergenic 55.0%
GGTCACCAACCAACTGAAGG+AGG + chr3_3:78584856-78584875 Msa0475400:three_prime_UTR 55.0%
CTCTACGCTGTCAAGAGGGT+AGG + chr3_3:78585109-78585128 Msa0475400:intron 55.0%
!! CTTGAGGGAAGGCGCTACTT+TGG - chr3_3:78586173-78586192 Msa0475410:CDS 55.0%
TGATCCCTATGAGAGGGCCA+AGG - chr3_3:78586659-78586678 Msa0475410:CDS 55.0%
GCCCTCTCATAGGGATCATG+TGG + chr3_3:78586661-78586680 Msa0475400:three_prime_UTR 55.0%
GGGGTAGTCCATTTGTCCTG+AGG - chr3_3:78586885-78586904 Msa0475410:CDS 55.0%
GTCGCCGATGAAGCCCTTCA+CGG - chr3_3:78581935-78581954 None:intergenic 60.0%
CTCTCACCGCCGTGATACGA+CGG + chr3_3:78581984-78582003 Msa0475400:CDS 60.0%
GTCGTACCGTCGTATCACGG+CGG - chr3_3:78581993-78582012 None:intergenic 60.0%
GCGATATGGGGTTGCAGCAG+TGG + chr3_3:78583341-78583360 Msa0475400:CDS 60.0%
GCACAGCAAGGCCTTCCACA+AGG - chr3_3:78585961-78585980 Msa0475410:CDS 60.0%
!! GAGGGAAGGCGCTACTTTGG+AGG - chr3_3:78586170-78586189 Msa0475410:CDS 60.0%
! GAGGGCCAAGGCGCGATTTT+GGG - chr3_3:78586647-78586666 Msa0475410:CDS 60.0%
! AGAGGGCCAAGGCGCGATTT+TGG - chr3_3:78586648-78586667 Msa0475410:CDS 60.0%
CAAGAGCCCACTTGACCCTC+AGG + chr3_3:78586866-78586885 Msa0475400:three_prime_UTR 60.0%
GACGCCGCCGTAGCTTCAGA+TGG + chr3_3:78581952-78581971 Msa0475400:exon 65.0%
AGGAGGGAGTCTTGCGGCTG+TGG + chr3_3:78583565-78583584 Msa0475400:CDS 65.0%
GGAGGGAGTCTTGCGGCTGT+GGG + chr3_3:78583566-78583585 Msa0475400:CDS 65.0%
GCGGCTGTGGGAAGCCAGTA+AGG + chr3_3:78583578-78583597 Msa0475400:CDS 65.0%
TCGCGCCTTGGCCCTCTCAT+AGG + chr3_3:78586651-78586670 Msa0475400:three_prime_UTR 65.0%
CGCGCCTTGGCCCTCTCATA+GGG + chr3_3:78586652-78586671 Msa0475400:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 78581854 78586994 78581854 ID=Msa0475400;Name=Msa0475400
chr3_3 mRNA 78581854 78586994 78581854 ID=Msa0475400-mRNA-1;Parent=Msa0475400;Name=Msa0475400-mRNA-1;_AED=0.07;_eAED=0.07;_QI=117|1|1|1|0.25|0.2|5|1041|523
chr3_3 exon 78581854 78582300 78581854 ID=Msa0475400-mRNA-1:exon:21160;Parent=Msa0475400-mRNA-1
chr3_3 exon 78582946 78584333 78582946 ID=Msa0475400-mRNA-1:exon:21161;Parent=Msa0475400-mRNA-1
chr3_3 exon 78584741 78584892 78584741 ID=Msa0475400-mRNA-1:exon:21162;Parent=Msa0475400-mRNA-1
chr3_3 exon 78585920 78586291 78585920 ID=Msa0475400-mRNA-1:exon:21163;Parent=Msa0475400-mRNA-1
chr3_3 exon 78586624 78586994 78586624 ID=Msa0475400-mRNA-1:exon:21164;Parent=Msa0475400-mRNA-1
chr3_3 five_prime_UTR 78581854 78581970 78581854 ID=Msa0475400-mRNA-1:five_prime_utr;Parent=Msa0475400-mRNA-1
chr3_3 CDS 78581971 78582300 78581971 ID=Msa0475400-mRNA-1:cds;Parent=Msa0475400-mRNA-1
chr3_3 CDS 78582946 78584187 78582946 ID=Msa0475400-mRNA-1:cds;Parent=Msa0475400-mRNA-1
chr3_3 three_prime_UTR 78584188 78584333 78584188 ID=Msa0475400-mRNA-1:three_prime_utr;Parent=Msa0475400-mRNA-1
chr3_3 three_prime_UTR 78584741 78584892 78584741 ID=Msa0475400-mRNA-1:three_prime_utr;Parent=Msa0475400-mRNA-1
chr3_3 three_prime_UTR 78585920 78586291 78585920 ID=Msa0475400-mRNA-1:three_prime_utr;Parent=Msa0475400-mRNA-1
chr3_3 three_prime_UTR 78586624 78586994 78586624 ID=Msa0475400-mRNA-1:three_prime_utr;Parent=Msa0475400-mRNA-1
Gene Sequence

>Msa0475400

ATGGCGAACCAATCTCTCACCGCCGTGATACGACGGTACGACACGCTGAATCTTTCTCTTACTAATTCCCCATATACTTCTTCTCTTCGCAGCAGCATCAGTTTCTTTTTGGGCGCACGAACTCTCTACACCCACGCAGATTCTCGCACTTCTACATTTTCAGATAAACAGAATCTGAAGAGCTTAATTGCGCGATTCAAACCTTCAACGCAAACTCCATTGCCAGTGCTTCAAAATTGGGTCGATCAAGGTAACAAGCTTTCATCATCGGAACTGAGATGCATCTCCAGAAGGCTCATCAAATCCAAACGCTACAATCACGCATTCGAGGTATTCAACTGGATGGAAAACCAACAAAAATTCCGCATAAACCCAGCTGATCATGCTCTGAAGTTGGAGTTAATCGCTAAAAACTGTGGGCTAATGGAAGCTGAAGAATATTTTATGCGTATACCTGACTCAGCTGGAAAGAAAGCCGCCTATCTCCCACTTCTACGTGGCTATGTAGGAGATAGGGACACCAGTAAAGCTGAGACGTTCATGGAGAAGCTCTATGAACTGGGGCTAGTGGTAAACGCTCACCCTTATAATGAAATGATGAAACTATATCTTGCCACATGTGAGTACCGAAAGGTACCCCTAGTTATCCAACAAATAAAACGAAATAAAGTACCCTTGAATGTTCTGTCTTACAACCTTTGGATGAGTGCTTGTGATGAGGGAGAGCGATATGGGGTTGCAGCAGTGGAAACAGTTTTTAGAGAAATGCAAAATGATGAGAATGTTGAAATGGGATGGAGCAGTCTTGCTACTTTAGCCAATGTGTATATGAAAGCAGGACAATATGAGAAAGCCATTCTAGTTCTAAAAAATGCCGAAGAGAAACTGTCTACATGTAATCGTCTTGGTTACTTCTTCATCATAACACTATACGCCTCTTTGAAGCAAAAGGAGGGAGTCTTGCGGCTGTGGGAAGCCAGTAAGGCAGTTGGTGGAAGAATCAGTTGTGCCAACTATATTTGCATACTAACAAGCTTGGTGAAGCTTGGGGACATAGCACAAGCCAGAAGAATCTTCAGAGAATGGGAATCTAATTGTCAAAAATATGATATCAGAGTCTCTAATGTTCTTTTAGGAGCATATGTGCGGAATGGATTAATAGAAGAAGCTGAATCATTGCATCTCCACACATTGCAGAAGGGTGGCTGTCCAAACTACAAGACGTGGGAAATTCTCATTGAAGGATATGTCAATTGGCAAAAGATGGATGAGGCTATTATTGCCATGAAAAGAGCTTTGGCTATGTTGAAAGACTGCCATTGGAGGCCGCCACAAAGAATTGTATTAGCCATAGCTGAATATTTGGAGAAATGTGGGAATTTTGAATATGCAAATGAGTACATCACAGATATTCATAATTTAGGTCTTGGAAGTTTATCATTGTATAAAATATTGCTTAGAATGCACCTTTCTGCTCAAGAACCACCTTTCCATGTCCTTAAAATGATCAATAAAGACAAAATGGAGATGGATAGTGAGACTGTTTCCATTCTTAAAGGCTTCACTGGGTAA
Protein sequence

>Msa0475400

MANQSLTAVIRRYDTLNLSLTNSPYTSSLRSSISFFLGARTLYTHADSRTSTFSDKQNLKSLIARFKPSTQTPLPVLQNWVDQGNKLSSSELRCISRRLIKSKRYNHAFEVFNWMENQQKFRINPADHALKLELIAKNCGLMEAEEYFMRIPDSAGKKAAYLPLLRGYVGDRDTSKAETFMEKLYELGLVVNAHPYNEMMKLYLATCEYRKVPLVIQQIKRNKVPLNVLSYNLWMSACDEGERYGVAAVETVFREMQNDENVEMGWSSLATLANVYMKAGQYEKAILVLKNAEEKLSTCNRLGYFFIITLYASLKQKEGVLRLWEASKAVGGRISCANYICILTSLVKLGDIAQARRIFREWESNCQKYDIRVSNVLLGAYVRNGLIEEAESLHLHTLQKGGCPNYKTWEILIEGYVNWQKMDEAIIAMKRALAMLKDCHWRPPQRIVLAIAEYLEKCGNFEYANEYITDIHNLGLGSLSLYKILLRMHLSAQEPPFHVLKMINKDKMEMDSETVSILKGFTG*