Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349050 | XP_003598178.1 | 98.625 | 509 | 7 | 0 | 1 | 509 | 1 | 509 | 0.0 | 1015 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349050 | sp|Q07423|HEX6_RICCO | 78.586 | 495 | 106 | 0 | 6 | 500 | 5 | 499 | 0.0 | 804 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349050 | G7IVL0 | 98.625 | 509 | 7 | 0 | 1 | 509 | 1 | 509 | 0.0 | 1015 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0349050 | 0.833814 | 4.295705e-56 | -8.615850e-47 |
| Msa0008850 | Msa0349050 | 0.821835 | 3.267693e-53 | -8.615850e-47 |
| Msa0028280 | Msa0349050 | 0.821142 | 4.725251e-53 | -8.615850e-47 |
| Msa0030030 | Msa0349050 | 0.820615 | 6.244815e-53 | -8.615850e-47 |
| Msa0039200 | Msa0349050 | 0.800717 | 1.264304e-48 | -8.615850e-47 |
| Msa0047470 | Msa0349050 | 0.848584 | 5.583960e-60 | -8.615850e-47 |
| Msa0051100 | Msa0349050 | 0.850190 | 1.992979e-60 | -8.615850e-47 |
| Msa0055280 | Msa0349050 | 0.828296 | 9.728479e-55 | -8.615850e-47 |
| Msa0060600 | Msa0349050 | 0.803653 | 3.146009e-49 | -8.615850e-47 |
| Msa0074760 | Msa0349050 | 0.806184 | 9.306467e-50 | -8.615850e-47 |
| Msa0077330 | Msa0349050 | 0.810656 | 1.034115e-50 | -8.615850e-47 |
| Msa0083160 | Msa0349050 | 0.823689 | 1.209934e-53 | -8.615850e-47 |
| Msa0100250 | Msa0349050 | 0.803869 | 2.837395e-49 | -8.615850e-47 |
| Msa0101060 | Msa0349050 | 0.834917 | 2.270791e-56 | -8.615850e-47 |
| Msa0101650 | Msa0349050 | 0.828778 | 7.438624e-55 | -8.615850e-47 |
| Msa0103060 | Msa0349050 | 0.811728 | 6.056028e-51 | -8.615850e-47 |
| Msa0133880 | Msa0349050 | 0.800218 | 1.598113e-48 | -8.615850e-47 |
| Msa0169960 | Msa0349050 | 0.841487 | 4.611544e-58 | -8.615850e-47 |
| Msa0188500 | Msa0349050 | 0.809764 | 1.610072e-50 | -8.615850e-47 |
| Msa0200840 | Msa0349050 | 0.808791 | 2.603830e-50 | -8.615850e-47 |
| Msa0200870 | Msa0349050 | 0.804090 | 2.552536e-49 | -8.615850e-47 |
| Msa0203180 | Msa0349050 | 0.837774 | 4.261213e-57 | -8.615850e-47 |
| Msa0222720 | Msa0349050 | 0.804129 | 2.505048e-49 | -8.615850e-47 |
| Msa0223100 | Msa0349050 | 0.821226 | 4.519753e-53 | -8.615850e-47 |
| Msa0223290 | Msa0349050 | 0.814054 | 1.872422e-51 | -8.615850e-47 |
| Msa0223380 | Msa0349050 | 0.824814 | 6.582633e-54 | -8.615850e-47 |
| Msa0232860 | Msa0349050 | 0.807286 | 5.444851e-50 | -8.615850e-47 |
| Msa0243470 | Msa0349050 | 0.808255 | 3.388250e-50 | -8.615850e-47 |
| Msa0246300 | Msa0349050 | 0.816457 | 5.475279e-52 | -8.615850e-47 |
| Msa0251150 | Msa0349050 | 0.814034 | 1.892112e-51 | -8.615850e-47 |
| Msa0253370 | Msa0349050 | 0.806929 | 6.478776e-50 | -8.615850e-47 |
| Msa0256430 | Msa0349050 | 0.834371 | 3.114993e-56 | -8.615850e-47 |
| Msa0265210 | Msa0349050 | 0.805892 | 1.071654e-49 | -8.615850e-47 |
| Msa0281940 | Msa0349050 | 0.833014 | 6.802409e-56 | -8.615850e-47 |
| Msa0284870 | Msa0349050 | 0.839746 | 1.317392e-57 | -8.615850e-47 |
| Msa0288320 | Msa0349050 | 0.823181 | 1.590576e-53 | -8.615850e-47 |
| Msa0292180 | Msa0349050 | 0.817566 | 3.085837e-52 | -8.615850e-47 |
| Msa0323630 | Msa0349050 | 0.826343 | 2.857393e-54 | -8.615850e-47 |
| Msa0330270 | Msa0349050 | 0.806254 | 8.994036e-50 | -8.615850e-47 |
| Msa0330400 | Msa0349050 | 0.806998 | 6.265492e-50 | -8.615850e-47 |
| Msa0336270 | Msa0349050 | 0.810600 | 1.063478e-50 | -8.615850e-47 |
| Msa0349050 | Msa0362430 | 0.824008 | 1.018825e-53 | -8.615850e-47 |
| Msa0349050 | Msa0369780 | 0.804842 | 1.779147e-49 | -8.615850e-47 |
| Msa0349050 | Msa0379500 | 0.808511 | 2.988384e-50 | -8.615850e-47 |
| Msa0349050 | Msa0379540 | 0.847840 | 8.966453e-60 | -8.615850e-47 |
| Msa0349050 | Msa0393520 | 0.866745 | 2.277542e-65 | -8.615850e-47 |
| Msa0349050 | Msa0404220 | 0.834651 | 2.650218e-56 | -8.615850e-47 |
| Msa0349050 | Msa0411000 | 0.825811 | 3.823789e-54 | -8.615850e-47 |
| Msa0349050 | Msa0414070 | 0.803215 | 3.877389e-49 | -8.615850e-47 |
| Msa0349050 | Msa0417150 | 0.802041 | 6.771039e-49 | -8.615850e-47 |
| Msa0349050 | Msa0423600 | 0.811482 | 6.848883e-51 | -8.615850e-47 |
| Msa0349050 | Msa0431520 | 0.829648 | 4.576398e-55 | -8.615850e-47 |
| Msa0349050 | Msa0431830 | 0.842633 | 2.295312e-58 | -8.615850e-47 |
| Msa0349050 | Msa0454940 | 0.802313 | 5.953067e-49 | -8.615850e-47 |
| Msa0349050 | Msa0456480 | 0.828303 | 9.688747e-55 | -8.615850e-47 |
| Msa0349050 | Msa0462140 | 0.869035 | 4.185951e-66 | -8.615850e-47 |
| Msa0349050 | Msa0467800 | 0.801576 | 8.435422e-49 | -8.615850e-47 |
| Msa0349050 | Msa0467880 | 0.801500 | 8.742869e-49 | -8.615850e-47 |
| Msa0349050 | Msa0475400 | 0.820208 | 7.745246e-53 | -8.615850e-47 |
| Msa0349050 | Msa0488850 | 0.930627 | 1.243664e-93 | -8.615850e-47 |
| Msa0349050 | Msa0502910 | 0.830555 | 2.748696e-55 | -8.615850e-47 |
| Msa0349050 | Msa0505660 | 0.803805 | 2.924811e-49 | -8.615850e-47 |
| Msa0349050 | Msa0509540 | 0.810930 | 9.023226e-51 | -8.615850e-47 |
| Msa0349050 | Msa0549740 | 0.825376 | 4.847400e-54 | -8.615850e-47 |
| Msa0349050 | Msa0568610 | 0.810698 | 1.012549e-50 | -8.615850e-47 |
| Msa0349050 | Msa0576600 | 0.801477 | 8.837765e-49 | -8.615850e-47 |
| Msa0349050 | Msa0598250 | 0.807476 | 4.961118e-50 | -8.615850e-47 |
| Msa0349050 | Msa0618520 | 0.800426 | 1.449021e-48 | -8.615850e-47 |
| Msa0349050 | Msa0620640 | 0.844417 | 7.660331e-59 | -8.615850e-47 |
| Msa0349050 | Msa0639030 | 0.810626 | 1.049497e-50 | -8.615850e-47 |
| Msa0349050 | Msa0646390 | 0.833747 | 4.465274e-56 | -8.615850e-47 |
| Msa0349050 | Msa0654060 | 0.826716 | 2.328635e-54 | -8.615850e-47 |
| Msa0349050 | Msa0656270 | 0.826113 | 3.241659e-54 | -8.615850e-47 |
| Msa0349050 | Msa0690350 | 0.804823 | 1.795763e-49 | -8.615850e-47 |
| Msa0349050 | Msa0697600 | 0.806880 | 6.635649e-50 | -8.615850e-47 |
| Msa0349050 | Msa0698900 | 0.817907 | 2.584372e-52 | -8.615850e-47 |
| Msa0349050 | Msa0700070 | 0.825366 | 4.876077e-54 | -8.615850e-47 |
| Msa0349050 | Msa0719340 | 0.818822 | 1.603992e-52 | -8.615850e-47 |
| Msa0349050 | Msa0724050 | 0.806851 | 6.730264e-50 | -8.615850e-47 |
| Msa0349050 | Msa0726610 | 0.816573 | 5.156850e-52 | -8.615850e-47 |
| Msa0349050 | Msa0731710 | 0.800526 | 1.383222e-48 | -8.615850e-47 |
| Msa0349050 | Msa0736930 | 0.811022 | 8.616623e-51 | -8.615850e-47 |
| Msa0349050 | Msa0739610 | 0.822405 | 2.410949e-53 | -8.615850e-47 |
| Msa0349050 | Msa0743640 | 0.813242 | 2.826492e-51 | -8.615850e-47 |
| Msa0349050 | Msa0752580 | 0.819851 | 9.349257e-53 | -8.615850e-47 |
| Msa0349050 | Msa0754350 | 0.815681 | 8.160886e-52 | -8.615850e-47 |
| Msa0349050 | Msa0754500 | 0.818440 | 1.958565e-52 | -8.615850e-47 |
| Msa0349050 | Msa0756410 | 0.806207 | 9.203598e-50 | -8.615850e-47 |
| Msa0349050 | Msa0763880 | 0.818352 | 2.049843e-52 | -8.615850e-47 |
| Msa0349050 | Msa0763910 | 0.829122 | 6.142519e-55 | -8.615850e-47 |
| Msa0349050 | Msa0771960 | 0.832403 | 9.642316e-56 | -8.615850e-47 |
| Msa0349050 | Msa0772150 | 0.815936 | 7.161167e-52 | -8.615850e-47 |
| Msa0349050 | Msa0773260 | 0.826066 | 3.327109e-54 | -8.615850e-47 |
| Msa0349050 | Msa0773290 | 0.802177 | 6.347929e-49 | -8.615850e-47 |
| Msa0349050 | Msa0782030 | 0.801960 | 7.036294e-49 | -8.615850e-47 |
| Msa0349050 | Msa0787720 | 0.823980 | 1.034036e-53 | -8.615850e-47 |
| Msa0349050 | Msa0793060 | 0.801653 | 8.136632e-49 | -8.615850e-47 |
| Msa0349050 | Msa0811940 | 0.818962 | 1.490514e-52 | -8.615850e-47 |
| Msa0349050 | Msa0815950 | 0.804827 | 1.791845e-49 | -8.615850e-47 |
| Msa0349050 | Msa0819670 | 0.807852 | 4.127906e-50 | -8.615850e-47 |
| Msa0349050 | Msa0822370 | 0.816046 | 6.767042e-52 | -8.615850e-47 |
| Msa0349050 | Msa0824770 | 0.806523 | 7.891413e-50 | -8.615850e-47 |
| Msa0349050 | Msa0830900 | 0.810317 | 1.224237e-50 | -8.615850e-47 |
| Msa0349050 | Msa0844100 | 0.824025 | 1.009131e-53 | -8.615850e-47 |
| Msa0349050 | Msa0861560 | 0.829143 | 6.069268e-55 | -8.615850e-47 |
| Msa0349050 | Msa0861800 | 0.806286 | 8.854694e-50 | -8.615850e-47 |
| Msa0349050 | Msa0863760 | 0.816815 | 4.553339e-52 | -8.615850e-47 |
| Msa0349050 | Msa0887070 | 0.822620 | 2.148470e-53 | -8.615850e-47 |
| Msa0349050 | Msa0899700 | 0.814772 | 1.299672e-51 | -8.615850e-47 |
| Msa0349050 | Msa0903730 | 0.819461 | 1.147341e-52 | -8.615850e-47 |
| Msa0349050 | Msa0934830 | 0.844692 | 6.458181e-59 | -8.615850e-47 |
| Msa0349050 | Msa0950410 | 0.848340 | 6.524682e-60 | -8.615850e-47 |
| Msa0349050 | Msa0950620 | 0.824105 | 9.664474e-54 | -8.615850e-47 |
| Msa0349050 | Msa0964680 | 0.828090 | 1.090589e-54 | -8.615850e-47 |
| Msa0349050 | Msa0971860 | 0.854792 | 9.722206e-62 | -8.615850e-47 |
| Msa0349050 | Msa0973130 | 0.816902 | 4.351287e-52 | -8.615850e-47 |
| Msa0349050 | Msa0973230 | 0.817231 | 3.670821e-52 | -8.615850e-47 |
| Msa0349050 | Msa0975560 | 0.802849 | 4.615477e-49 | -8.615850e-47 |
| Msa0349050 | Msa0978000 | 0.823890 | 1.085750e-53 | -8.615850e-47 |
| Msa0349050 | Msa0982590 | 0.805473 | 1.312531e-49 | -8.615850e-47 |
| Msa0349050 | Msa1016110 | 0.852979 | 3.234438e-61 | -8.615850e-47 |
| Msa0349050 | Msa1033160 | 0.806859 | 6.704169e-50 | -8.615850e-47 |
| Msa0349050 | Msa1043870 | 0.806117 | 9.613556e-50 | -8.615850e-47 |
| Msa0349050 | Msa1044040 | 0.815532 | 8.809261e-52 | -8.615850e-47 |
| Msa0349050 | Msa1071310 | 0.801865 | 7.357977e-49 | -8.615850e-47 |
| Msa0349050 | Msa1102180 | 0.831704 | 1.435589e-55 | -8.615850e-47 |
| Msa0349050 | Msa1120620 | 0.845220 | 4.653287e-59 | -8.615850e-47 |
| Msa0349050 | Msa1138600 | 0.803595 | 3.234132e-49 | -8.615850e-47 |
| Msa0349050 | Msa1157020 | 0.804203 | 2.417624e-49 | -8.615850e-47 |
| Msa0349050 | Msa1157920 | 0.811772 | 5.924025e-51 | -8.615850e-47 |
| Msa0349050 | Msa1166450 | 0.804601 | 1.997498e-49 | -8.615850e-47 |
| Msa0349050 | Msa1182990 | 0.858283 | 9.161901e-63 | -8.615850e-47 |
| Msa0349050 | Msa1184580 | 0.815707 | 8.052508e-52 | -8.615850e-47 |
| Msa0349050 | Msa1186580 | 0.809386 | 1.941883e-50 | -8.615850e-47 |
| Msa0349050 | Msa1188820 | 0.813808 | 2.121923e-51 | -8.615850e-47 |
| Msa0349050 | Msa1191390 | 0.810221 | 1.283901e-50 | -8.615850e-47 |
| Msa0349050 | Msa1200960 | 0.819815 | 9.525124e-53 | -8.615850e-47 |
| Msa0349050 | Msa1209790 | 0.812424 | 4.269470e-51 | -8.615850e-47 |
| Msa0349050 | Msa1211390 | 0.823562 | 1.295570e-53 | -8.615850e-47 |
| Msa0349050 | Msa1220740 | 0.801364 | 9.325573e-49 | -8.615850e-47 |
| Msa0349050 | Msa1225820 | 0.805860 | 1.088431e-49 | -8.615850e-47 |
| Msa0349050 | Msa1231520 | 0.811014 | 8.653192e-51 | -8.615850e-47 |
| Msa0349050 | Msa1235020 | 0.819599 | 1.067467e-52 | -8.615850e-47 |
| Msa0349050 | Msa1237260 | 0.821387 | 4.147512e-53 | -8.615850e-47 |
| Msa0349050 | Msa1242990 | 0.806728 | 7.144853e-50 | -8.615850e-47 |
| Msa0349050 | Msa1253970 | 0.805745 | 1.150893e-49 | -8.615850e-47 |
| Msa0349050 | Msa1272130 | 0.869036 | 4.181747e-66 | -8.615850e-47 |
| Msa0349050 | Msa1272960 | 0.807356 | 5.261236e-50 | -8.615850e-47 |
| Msa0349050 | Msa1282210 | 0.843869 | 1.074815e-58 | -8.615850e-47 |
| Msa0349050 | Msa1306700 | 0.824843 | 6.479520e-54 | -8.615850e-47 |
| Msa0349050 | Msa1317710 | 0.836954 | 6.913102e-57 | -8.615850e-47 |
| Msa0349050 | Msa1333430 | 0.803853 | 2.858425e-49 | -8.615850e-47 |
| Msa0349050 | Msa1335720 | 0.825813 | 3.820645e-54 | -8.615850e-47 |
| Msa0349050 | Msa1340880 | 0.805305 | 1.423432e-49 | -8.615850e-47 |
| Msa0349050 | Msa1346540 | 0.842124 | 3.132331e-58 | -8.615850e-47 |
| Msa0349050 | Msa1355950 | 0.813051 | 3.113235e-51 | -8.615850e-47 |
| Msa0349050 | Msa1357720 | 0.802009 | 6.876370e-49 | -8.615850e-47 |
| Msa0349050 | Msa1360380 | 0.846740 | 1.796610e-59 | -8.615850e-47 |
| Msa0349050 | Msa1361190 | 0.812938 | 3.295775e-51 | -8.615850e-47 |
| Msa0349050 | Msa1405470 | 0.855309 | 6.877045e-62 | -8.615850e-47 |
| Msa0349050 | Msa1428440 | 0.806287 | 8.853403e-50 | -8.615850e-47 |
| Msa0349050 | Msa1440180 | 0.846881 | 1.643230e-59 | -8.615850e-47 |
| Msa0349050 | Msa1449740 | 0.846372 | 2.263776e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349050 | MtrunA17_Chr3g0078971 | 98.625 | 509 | 7 | 0 | 1 | 509 | 1 | 509 | 0.0 | 1015 |
| Msa0349050 | MtrunA17_Chr3g0078991 | 76.495 | 485 | 113 | 1 | 16 | 499 | 16 | 500 | 0.0 | 772 |
| Msa0349050 | MtrunA17_Chr4g0065311 | 59.006 | 483 | 195 | 3 | 15 | 497 | 13 | 492 | 0.0 | 597 |
| Msa0349050 | MtrunA17_Chr5g0437021 | 59.879 | 496 | 193 | 4 | 9 | 501 | 9 | 501 | 0.0 | 593 |
| Msa0349050 | MtrunA17_Chr5g0394341 | 56.619 | 491 | 209 | 4 | 15 | 502 | 14 | 503 | 0.0 | 592 |
| Msa0349050 | MtrunA17_Chr5g0445601 | 58.025 | 486 | 201 | 3 | 15 | 500 | 19 | 501 | 0.0 | 587 |
| Msa0349050 | MtrunA17_Chr7g0257631 | 59.627 | 483 | 192 | 3 | 15 | 497 | 53 | 532 | 0.0 | 587 |
| Msa0349050 | MtrunA17_Chr1g0164871 | 58.097 | 494 | 201 | 4 | 13 | 503 | 13 | 503 | 0.0 | 579 |
| Msa0349050 | MtrunA17_Chr1g0164851 | 58.452 | 491 | 198 | 4 | 13 | 500 | 13 | 500 | 0.0 | 578 |
| Msa0349050 | MtrunA17_Chr4g0048411 | 59.274 | 496 | 196 | 3 | 13 | 503 | 13 | 507 | 0.0 | 572 |
| Msa0349050 | MtrunA17_Chr4g0065324 | 55.556 | 486 | 213 | 3 | 15 | 500 | 21 | 503 | 0.0 | 570 |
| Msa0349050 | MtrunA17_Chr5g0417611 | 57.515 | 499 | 205 | 4 | 8 | 500 | 6 | 503 | 0.0 | 556 |
| Msa0349050 | MtrunA17_Chr5g0420841 | 56.495 | 485 | 206 | 3 | 15 | 495 | 13 | 496 | 0.0 | 556 |
| Msa0349050 | MtrunA17_Chr3g0128081 | 56.823 | 491 | 207 | 3 | 11 | 497 | 10 | 499 | 0.0 | 548 |
| Msa0349050 | MtrunA17_Chr1g0205691 | 55.800 | 500 | 214 | 6 | 11 | 505 | 10 | 507 | 0.0 | 547 |
| Msa0349050 | MtrunA17_Chr1g0205681 | 53.099 | 484 | 223 | 4 | 15 | 495 | 15 | 497 | 0.0 | 546 |
| Msa0349050 | MtrunA17_Chr3g0115751 | 52.295 | 501 | 231 | 6 | 1 | 497 | 6 | 502 | 0.0 | 541 |
| Msa0349050 | MtrunA17_Chr1g0205671 | 53.002 | 483 | 224 | 3 | 15 | 495 | 15 | 496 | 0.0 | 541 |
| Msa0349050 | MtrunA17_Chr3g0115741 | 52.632 | 494 | 225 | 7 | 17 | 505 | 20 | 509 | 0.0 | 541 |
| Msa0349050 | MtrunA17_Chr3g0115721 | 51.594 | 502 | 235 | 6 | 8 | 505 | 8 | 505 | 0.0 | 539 |
| Msa0349050 | MtrunA17_Chr8g0390261 | 53.704 | 486 | 222 | 3 | 15 | 499 | 18 | 501 | 0.0 | 536 |
| Msa0349050 | MtrunA17_Chr3g0115781 | 52.738 | 493 | 224 | 7 | 18 | 505 | 20 | 508 | 0.0 | 535 |
| Msa0349050 | MtrunA17_Chr6g0486681 | 52.941 | 493 | 229 | 3 | 15 | 506 | 18 | 508 | 0.0 | 533 |
| Msa0349050 | MtrunA17_Chr6g0486671 | 52.941 | 493 | 229 | 3 | 15 | 506 | 18 | 508 | 0.0 | 533 |
| Msa0349050 | MtrunA17_Chr4g0048051 | 56.275 | 510 | 214 | 3 | 1 | 502 | 1 | 509 | 0.0 | 533 |
| Msa0349050 | MtrunA17_Chr3g0115711 | 51.710 | 497 | 227 | 6 | 16 | 509 | 16 | 502 | 0.0 | 527 |
| Msa0349050 | MtrunA17_Chr3g0085971 | 53.924 | 497 | 223 | 4 | 15 | 507 | 13 | 507 | 0.0 | 520 |
| Msa0349050 | MtrunA17_Chr8g0390141 | 51.904 | 499 | 234 | 4 | 15 | 509 | 18 | 514 | 9.32e-179 | 512 |
| Msa0349050 | MtrunA17_Chr3g0128171 | 55.432 | 451 | 195 | 3 | 50 | 495 | 1 | 450 | 5.72e-172 | 493 |
| Msa0349050 | MtrunA17_Chr3g0115731 | 47.233 | 506 | 222 | 10 | 8 | 502 | 8 | 479 | 6.13e-160 | 463 |
| Msa0349050 | MtrunA17_Chr3g0078791 | 53.196 | 438 | 178 | 4 | 68 | 502 | 16 | 429 | 2.61e-158 | 457 |
| Msa0349050 | MtrunA17_Chr4g0065351 | 54.094 | 342 | 155 | 2 | 161 | 502 | 1 | 340 | 8.33e-136 | 397 |
| Msa0349050 | MtrunA17_Chr3g0115771 | 37.261 | 314 | 149 | 8 | 151 | 461 | 5 | 273 | 3.09e-63 | 207 |
| Msa0349050 | MtrunA17_Chr6g0485661 | 28.758 | 459 | 295 | 9 | 28 | 476 | 63 | 499 | 4.55e-56 | 195 |
| Msa0349050 | MtrunA17_Chr4g0034681 | 27.054 | 499 | 319 | 10 | 27 | 502 | 34 | 510 | 2.64e-54 | 191 |
| Msa0349050 | MtrunA17_Chr3g0144361 | 28.184 | 479 | 301 | 10 | 27 | 484 | 32 | 488 | 1.26e-53 | 189 |
| Msa0349050 | MtrunA17_Chr8g0390521 | 27.112 | 509 | 336 | 10 | 10 | 505 | 3 | 489 | 2.52e-53 | 187 |
| Msa0349050 | MtrunA17_Chr8g0373531 | 29.124 | 491 | 303 | 12 | 28 | 496 | 24 | 491 | 2.32e-51 | 182 |
| Msa0349050 | MtrunA17_Chr4g0021771 | 26.205 | 477 | 318 | 9 | 23 | 490 | 55 | 506 | 5.51e-50 | 179 |
| Msa0349050 | MtrunA17_Chr4g0036021 | 26.283 | 487 | 317 | 10 | 27 | 495 | 31 | 493 | 2.28e-49 | 177 |
| Msa0349050 | MtrunA17_Chr5g0432581 | 27.530 | 494 | 315 | 10 | 18 | 490 | 14 | 485 | 4.45e-49 | 176 |
| Msa0349050 | MtrunA17_Chr4g0065341 | 55.782 | 147 | 62 | 2 | 8 | 152 | 10 | 155 | 3.14e-48 | 164 |
| Msa0349050 | MtrunA17_Chr2g0282031 | 27.941 | 476 | 305 | 12 | 24 | 488 | 53 | 501 | 1.56e-47 | 172 |
| Msa0349050 | MtrunA17_Chr1g0213611 | 27.366 | 486 | 319 | 12 | 20 | 495 | 75 | 536 | 4.70e-47 | 171 |
| Msa0349050 | MtrunA17_Chr4g0039651 | 28.661 | 478 | 298 | 10 | 24 | 484 | 46 | 497 | 2.21e-46 | 169 |
| Msa0349050 | MtrunA17_Chr7g0214451 | 26.349 | 482 | 325 | 11 | 20 | 495 | 30 | 487 | 2.49e-45 | 166 |
| Msa0349050 | MtrunA17_Chr1g0213631 | 28.354 | 395 | 269 | 9 | 103 | 490 | 48 | 435 | 2.80e-44 | 162 |
| Msa0349050 | MtrunA17_Chr5g0446681 | 57.812 | 128 | 54 | 0 | 375 | 502 | 157 | 284 | 1.76e-41 | 150 |
| Msa0349050 | MtrunA17_Chr5g0446681 | 43.646 | 181 | 66 | 2 | 13 | 193 | 12 | 156 | 9.11e-35 | 132 |
| Msa0349050 | MtrunA17_Chr7g0250881 | 25.780 | 481 | 323 | 11 | 6 | 485 | 53 | 500 | 2.29e-40 | 152 |
| Msa0349050 | MtrunA17_Chr5g0403831 | 27.333 | 450 | 293 | 11 | 65 | 490 | 59 | 498 | 5.35e-40 | 151 |
| Msa0349050 | MtrunA17_Chr6g0457781 | 26.763 | 482 | 317 | 10 | 6 | 485 | 93 | 540 | 8.59e-40 | 151 |
| Msa0349050 | MtrunA17_Chr4g0066581 | 26.875 | 480 | 314 | 11 | 8 | 484 | 38 | 483 | 2.19e-39 | 149 |
| Msa0349050 | MtrunA17_Chr8g0373181 | 26.638 | 473 | 299 | 11 | 23 | 484 | 47 | 482 | 9.13e-39 | 147 |
| Msa0349050 | MtrunA17_Chr4g0032021 | 27.869 | 488 | 294 | 11 | 23 | 484 | 96 | 551 | 1.97e-38 | 147 |
| Msa0349050 | MtrunA17_Chr7g0273281 | 26.316 | 494 | 309 | 11 | 8 | 484 | 37 | 492 | 1.83e-36 | 141 |
| Msa0349050 | MtrunA17_Chr1g0155221 | 25.887 | 479 | 315 | 10 | 18 | 488 | 43 | 489 | 2.13e-36 | 140 |
| Msa0349050 | MtrunA17_Chr2g0286721 | 26.240 | 484 | 312 | 12 | 8 | 484 | 35 | 480 | 2.43e-35 | 137 |
| Msa0349050 | MtrunA17_Chr7g0228781 | 40.984 | 183 | 72 | 3 | 6 | 152 | 21 | 203 | 4.48e-34 | 127 |
| Msa0349050 | MtrunA17_Chr2g0303701 | 31.268 | 339 | 203 | 9 | 20 | 351 | 23 | 338 | 1.78e-33 | 133 |
| Msa0349050 | MtrunA17_Chr8g0373191 | 25.910 | 467 | 290 | 11 | 23 | 484 | 39 | 454 | 4.67e-33 | 131 |
| Msa0349050 | MtrunA17_Chr4g0004821 | 26.316 | 399 | 266 | 8 | 95 | 484 | 90 | 469 | 1.57e-32 | 129 |
| Msa0349050 | MtrunA17_Chr2g0303731 | 31.503 | 346 | 200 | 12 | 20 | 353 | 23 | 343 | 3.32e-32 | 130 |
| Msa0349050 | MtrunA17_Chr8g0376631 | 30.814 | 344 | 205 | 11 | 20 | 353 | 23 | 343 | 5.22e-32 | 129 |
| Msa0349050 | MtrunA17_Chr7g0259471 | 25.814 | 430 | 293 | 9 | 62 | 484 | 60 | 470 | 8.62e-32 | 127 |
| Msa0349050 | MtrunA17_Chr2g0290181 | 27.704 | 379 | 236 | 9 | 20 | 381 | 24 | 381 | 3.42e-31 | 127 |
| Msa0349050 | MtrunA17_Chr2g0290181 | 32.075 | 106 | 71 | 1 | 387 | 491 | 455 | 560 | 4.04e-11 | 65.5 |
| Msa0349050 | MtrunA17_Chr6g0486021 | 24.490 | 392 | 284 | 6 | 94 | 484 | 103 | 483 | 2.84e-29 | 120 |
| Msa0349050 | MtrunA17_Chr3g0119401 | 23.110 | 463 | 321 | 12 | 28 | 485 | 98 | 530 | 9.49e-29 | 119 |
| Msa0349050 | MtrunA17_Chr8g0376611 | 32.296 | 257 | 162 | 6 | 103 | 351 | 22 | 274 | 1.19e-28 | 119 |
| Msa0349050 | MtrunA17_Chr8g0376601 | 27.616 | 344 | 216 | 10 | 18 | 351 | 21 | 341 | 3.01e-28 | 118 |
| Msa0349050 | MtrunA17_Chr3g0115761 | 51.456 | 103 | 49 | 1 | 50 | 152 | 1 | 102 | 8.34e-28 | 107 |
| Msa0349050 | MtrunA17_Chr7g0259221 | 26.329 | 414 | 270 | 12 | 83 | 484 | 82 | 472 | 2.95e-27 | 114 |
| Msa0349050 | MtrunA17_Chr3g0121674 | 26.599 | 297 | 198 | 8 | 205 | 490 | 2 | 289 | 4.20e-24 | 102 |
| Msa0349050 | MtrunA17_Chr2g0290161 | 28.179 | 291 | 167 | 7 | 99 | 378 | 19 | 278 | 1.59e-23 | 103 |
| Msa0349050 | MtrunA17_Chr7g0273261 | 30.000 | 210 | 138 | 4 | 276 | 484 | 33 | 234 | 5.91e-19 | 86.7 |
| Msa0349050 | MtrunA17_Chr5g0434231 | 30.337 | 178 | 97 | 2 | 82 | 259 | 4 | 154 | 6.66e-19 | 83.6 |
| Msa0349050 | MtrunA17_Chr5g0407441 | 27.386 | 241 | 152 | 6 | 23 | 261 | 4 | 223 | 3.23e-17 | 85.1 |
| Msa0349050 | MtrunA17_Chr3g0146061 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 8.02e-16 | 80.5 |
| Msa0349050 | MtrunA17_Chr3g0144261 | 30.412 | 194 | 128 | 4 | 74 | 262 | 31 | 222 | 8.13e-16 | 80.5 |
| Msa0349050 | MtrunA17_Chr5g0404191 | 25.287 | 261 | 165 | 6 | 23 | 281 | 50 | 282 | 4.77e-15 | 75.9 |
| Msa0349050 | MtrunA17_Chr8g0370141 | 26.540 | 211 | 145 | 4 | 78 | 280 | 41 | 249 | 1.05e-14 | 75.9 |
| Msa0349050 | MtrunA17_Chr5g0419321 | 26.590 | 173 | 124 | 3 | 90 | 261 | 81 | 251 | 1.08e-14 | 77.0 |
| Msa0349050 | MtrunA17_Chr1g0211861 | 46.575 | 73 | 37 | 1 | 338 | 408 | 21 | 93 | 8.41e-13 | 65.1 |
| Msa0349050 | MtrunA17_Chr8g0370151 | 28.125 | 224 | 143 | 4 | 270 | 481 | 125 | 342 | 2.61e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0349050 | AT5G61520.1 | 62.041 | 490 | 177 | 4 | 17 | 500 | 18 | 504 | 0.0 | 617 |
| Msa0349050 | AT5G26340.1 | 58.384 | 495 | 202 | 4 | 9 | 500 | 9 | 502 | 0.0 | 605 |
| Msa0349050 | AT3G19930.1 | 60.612 | 490 | 189 | 3 | 13 | 500 | 13 | 500 | 0.0 | 600 |
| Msa0349050 | AT3G19930.2 | 60.612 | 490 | 189 | 3 | 13 | 500 | 13 | 500 | 0.0 | 600 |
| Msa0349050 | AT4G02050.2 | 57.732 | 485 | 202 | 3 | 15 | 499 | 19 | 500 | 0.0 | 598 |
| Msa0349050 | AT4G02050.1 | 57.732 | 485 | 202 | 3 | 15 | 499 | 19 | 500 | 0.0 | 598 |
| Msa0349050 | AT3G19940.1 | 58.367 | 490 | 199 | 4 | 19 | 505 | 21 | 508 | 0.0 | 593 |
| Msa0349050 | AT1G11260.1 | 57.980 | 495 | 204 | 2 | 8 | 499 | 8 | 501 | 0.0 | 589 |
| Msa0349050 | AT5G23270.1 | 58.367 | 490 | 200 | 3 | 9 | 495 | 10 | 498 | 0.0 | 580 |
| Msa0349050 | AT1G50310.1 | 57.320 | 485 | 202 | 4 | 19 | 500 | 21 | 503 | 0.0 | 579 |
| Msa0349050 | AT5G61520.2 | 61.790 | 458 | 166 | 4 | 49 | 500 | 2 | 456 | 0.0 | 573 |
| Msa0349050 | AT4G21480.1 | 56.859 | 503 | 211 | 3 | 1 | 500 | 1 | 500 | 0.0 | 558 |
| Msa0349050 | AT1G34580.1 | 51.503 | 499 | 230 | 7 | 4 | 495 | 6 | 499 | 0.0 | 528 |
| Msa0349050 | AT1G77210.2 | 50.920 | 489 | 237 | 3 | 15 | 502 | 18 | 504 | 0.0 | 524 |
| Msa0349050 | AT1G77210.1 | 50.920 | 489 | 237 | 3 | 15 | 502 | 18 | 504 | 0.0 | 524 |
| Msa0349050 | AT5G26250.1 | 48.824 | 510 | 250 | 7 | 1 | 507 | 1 | 502 | 3.39e-171 | 493 |
| Msa0349050 | AT1G34580.2 | 51.214 | 453 | 210 | 6 | 50 | 495 | 1 | 449 | 8.71e-167 | 479 |
| Msa0349050 | AT1G07340.1 | 50.996 | 502 | 239 | 6 | 1 | 499 | 1 | 498 | 7.43e-165 | 476 |
| Msa0349050 | AT3G05960.1 | 47.023 | 487 | 254 | 4 | 10 | 495 | 8 | 491 | 2.57e-163 | 473 |
| Msa0349050 | AT1G50310.2 | 56.250 | 352 | 149 | 4 | 152 | 500 | 11 | 360 | 2.65e-143 | 417 |
| Msa0349050 | AT1G77210.3 | 50.284 | 352 | 172 | 3 | 152 | 502 | 6 | 355 | 3.38e-126 | 372 |
| Msa0349050 | AT4G36670.1 | 30.237 | 506 | 295 | 15 | 25 | 505 | 18 | 490 | 4.83e-58 | 200 |
| Msa0349050 | AT2G18480.1 | 29.053 | 475 | 286 | 12 | 37 | 487 | 36 | 483 | 1.34e-55 | 194 |
| Msa0349050 | AT3G18830.1 | 28.515 | 505 | 314 | 12 | 27 | 509 | 40 | 519 | 2.93e-55 | 194 |
| Msa0349050 | AT2G16120.1 | 28.893 | 488 | 308 | 8 | 27 | 495 | 30 | 497 | 2.05e-54 | 191 |
| Msa0349050 | AT2G16130.1 | 28.657 | 499 | 317 | 8 | 16 | 495 | 19 | 497 | 3.29e-54 | 191 |
| Msa0349050 | AT3G05165.3 | 26.793 | 474 | 306 | 11 | 16 | 484 | 23 | 460 | 4.94e-44 | 162 |
| Msa0349050 | AT3G05165.2 | 26.793 | 474 | 306 | 11 | 16 | 484 | 23 | 460 | 4.94e-44 | 162 |
| Msa0349050 | AT3G05165.1 | 26.793 | 474 | 306 | 11 | 16 | 484 | 23 | 460 | 4.94e-44 | 162 |
| Msa0349050 | AT5G27360.1 | 25.620 | 484 | 319 | 8 | 6 | 484 | 18 | 465 | 5.99e-43 | 159 |
| Msa0349050 | AT5G17010.1 | 28.302 | 477 | 301 | 12 | 24 | 484 | 48 | 499 | 1.45e-42 | 159 |
| Msa0349050 | AT5G17010.3 | 28.302 | 477 | 301 | 12 | 24 | 484 | 48 | 499 | 1.45e-42 | 159 |
| Msa0349050 | AT5G17010.4 | 28.302 | 477 | 301 | 12 | 24 | 484 | 48 | 499 | 1.45e-42 | 159 |
| Msa0349050 | AT5G27360.3 | 25.620 | 484 | 319 | 8 | 6 | 484 | 66 | 513 | 2.89e-42 | 158 |
| Msa0349050 | AT5G27350.1 | 26.971 | 482 | 315 | 11 | 6 | 484 | 14 | 461 | 3.98e-42 | 157 |
| Msa0349050 | AT2G43330.1 | 25.577 | 477 | 317 | 9 | 27 | 492 | 35 | 484 | 5.66e-42 | 157 |
| Msa0349050 | AT2G20780.1 | 25.208 | 480 | 328 | 11 | 11 | 484 | 43 | 497 | 5.60e-41 | 154 |
| Msa0349050 | AT3G05150.1 | 26.392 | 485 | 315 | 10 | 6 | 484 | 18 | 466 | 1.26e-40 | 152 |
| Msa0349050 | AT3G05150.3 | 26.392 | 485 | 315 | 10 | 6 | 484 | 18 | 466 | 1.26e-40 | 152 |
| Msa0349050 | AT3G05150.2 | 26.392 | 485 | 315 | 10 | 6 | 484 | 18 | 466 | 1.52e-40 | 152 |
| Msa0349050 | AT1G08900.5 | 26.847 | 406 | 274 | 8 | 85 | 484 | 25 | 413 | 4.53e-40 | 150 |
| Msa0349050 | AT1G08900.3 | 26.847 | 406 | 274 | 8 | 85 | 484 | 59 | 447 | 7.89e-40 | 150 |
| Msa0349050 | AT1G08900.1 | 26.847 | 406 | 274 | 8 | 85 | 484 | 67 | 455 | 9.97e-40 | 150 |
| Msa0349050 | AT1G08900.2 | 26.847 | 406 | 274 | 8 | 85 | 484 | 67 | 455 | 9.97e-40 | 150 |
| Msa0349050 | AT5G16150.2 | 25.104 | 482 | 323 | 11 | 6 | 484 | 93 | 539 | 1.58e-39 | 151 |
| Msa0349050 | AT5G16150.1 | 25.104 | 482 | 323 | 11 | 6 | 484 | 93 | 539 | 1.58e-39 | 151 |
| Msa0349050 | AT5G16150.3 | 25.104 | 482 | 323 | 11 | 6 | 484 | 93 | 539 | 1.58e-39 | 151 |
| Msa0349050 | AT2G20780.2 | 26.340 | 429 | 299 | 10 | 66 | 488 | 26 | 443 | 4.40e-39 | 148 |
| Msa0349050 | AT1G75220.1 | 26.569 | 478 | 312 | 11 | 18 | 488 | 42 | 487 | 4.98e-39 | 148 |
| Msa0349050 | AT1G08890.1 | 27.407 | 405 | 275 | 8 | 85 | 485 | 69 | 458 | 6.15e-39 | 148 |
| Msa0349050 | AT5G27360.2 | 27.778 | 360 | 239 | 5 | 130 | 484 | 18 | 361 | 6.97e-39 | 145 |
| Msa0349050 | AT5G27360.5 | 27.778 | 360 | 239 | 5 | 130 | 484 | 18 | 361 | 6.97e-39 | 145 |
| Msa0349050 | AT3G05160.1 | 25.424 | 472 | 315 | 10 | 16 | 484 | 14 | 451 | 1.28e-38 | 147 |
| Msa0349050 | AT3G03090.1 | 27.719 | 469 | 300 | 10 | 31 | 484 | 55 | 499 | 1.74e-38 | 147 |
| Msa0349050 | AT1G08930.1 | 25.684 | 475 | 306 | 11 | 18 | 484 | 53 | 488 | 1.87e-38 | 147 |
| Msa0349050 | AT1G08930.2 | 25.684 | 475 | 306 | 11 | 18 | 484 | 53 | 488 | 1.87e-38 | 147 |
| Msa0349050 | AT5G59250.1 | 27.423 | 485 | 300 | 11 | 23 | 484 | 98 | 553 | 2.59e-38 | 147 |
| Msa0349050 | AT3G05160.3 | 26.485 | 404 | 282 | 7 | 83 | 484 | 12 | 402 | 4.79e-38 | 144 |
| Msa0349050 | AT3G05160.2 | 26.485 | 404 | 282 | 7 | 83 | 484 | 12 | 402 | 4.79e-38 | 144 |
| Msa0349050 | AT5G18840.1 | 27.686 | 484 | 302 | 14 | 16 | 490 | 37 | 481 | 2.00e-37 | 144 |
| Msa0349050 | AT3G05165.6 | 26.174 | 447 | 289 | 11 | 16 | 457 | 23 | 433 | 4.57e-37 | 143 |
| Msa0349050 | AT1G54730.2 | 26.767 | 467 | 289 | 9 | 29 | 484 | 38 | 462 | 6.68e-37 | 142 |
| Msa0349050 | AT3G05165.4 | 26.923 | 416 | 263 | 11 | 16 | 426 | 23 | 402 | 1.95e-36 | 141 |
| Msa0349050 | AT3G05165.5 | 26.923 | 416 | 263 | 11 | 16 | 426 | 23 | 402 | 1.95e-36 | 141 |
| Msa0349050 | AT3G05155.1 | 25.212 | 472 | 316 | 11 | 16 | 485 | 20 | 456 | 2.49e-36 | 140 |
| Msa0349050 | AT2G48020.2 | 26.008 | 496 | 314 | 11 | 2 | 486 | 7 | 460 | 3.46e-36 | 140 |
| Msa0349050 | AT2G48020.1 | 26.008 | 496 | 314 | 11 | 2 | 486 | 7 | 460 | 3.46e-36 | 140 |
| Msa0349050 | AT3G05400.1 | 25.581 | 473 | 313 | 12 | 16 | 484 | 19 | 456 | 4.19e-36 | 140 |
| Msa0349050 | AT1G19450.1 | 27.975 | 479 | 304 | 13 | 18 | 488 | 43 | 488 | 5.99e-36 | 140 |
| Msa0349050 | AT3G05400.2 | 24.947 | 473 | 296 | 13 | 16 | 484 | 19 | 436 | 1.13e-33 | 132 |
| Msa0349050 | AT4G04750.1 | 26.458 | 480 | 313 | 13 | 16 | 490 | 30 | 474 | 1.31e-32 | 130 |
| Msa0349050 | AT4G04750.2 | 26.458 | 480 | 313 | 13 | 16 | 490 | 30 | 474 | 1.31e-32 | 130 |
| Msa0349050 | AT4G04750.3 | 26.829 | 410 | 283 | 9 | 85 | 490 | 122 | 518 | 1.79e-32 | 130 |
| Msa0349050 | AT1G30220.1 | 29.070 | 344 | 211 | 11 | 20 | 353 | 25 | 345 | 5.03e-32 | 130 |
| Msa0349050 | AT1G30220.1 | 33.051 | 118 | 74 | 2 | 383 | 495 | 451 | 568 | 9.72e-11 | 64.7 |
| Msa0349050 | AT4G04760.1 | 25.417 | 480 | 304 | 12 | 24 | 490 | 32 | 470 | 5.17e-32 | 129 |
| Msa0349050 | AT1G08900.4 | 26.099 | 364 | 246 | 8 | 85 | 442 | 67 | 413 | 8.14e-32 | 127 |
| Msa0349050 | AT4G04760.3 | 25.837 | 418 | 278 | 9 | 85 | 490 | 14 | 411 | 1.75e-31 | 126 |
| Msa0349050 | AT1G54730.3 | 26.588 | 425 | 259 | 9 | 29 | 442 | 38 | 420 | 2.06e-31 | 126 |
| Msa0349050 | AT1G05030.1 | 24.675 | 462 | 310 | 12 | 29 | 484 | 85 | 514 | 4.48e-31 | 126 |
| Msa0349050 | AT1G05030.2 | 24.818 | 411 | 292 | 9 | 79 | 484 | 64 | 462 | 9.29e-31 | 125 |
| Msa0349050 | AT1G54730.5 | 25.482 | 467 | 274 | 10 | 29 | 484 | 38 | 441 | 1.09e-30 | 124 |
| Msa0349050 | AT1G67300.2 | 24.755 | 408 | 264 | 8 | 95 | 484 | 105 | 487 | 2.01e-30 | 124 |
| Msa0349050 | AT1G67300.1 | 24.510 | 408 | 264 | 8 | 95 | 484 | 105 | 486 | 3.78e-30 | 123 |
| Msa0349050 | AT1G67300.3 | 24.510 | 408 | 264 | 8 | 95 | 484 | 105 | 486 | 3.78e-30 | 123 |
| Msa0349050 | AT4G04760.2 | 25.620 | 484 | 293 | 14 | 24 | 489 | 32 | 466 | 3.79e-30 | 123 |
| Msa0349050 | AT1G08920.1 | 22.410 | 473 | 324 | 9 | 18 | 484 | 27 | 462 | 1.59e-29 | 121 |
| Msa0349050 | AT1G08920.2 | 22.917 | 480 | 320 | 11 | 18 | 484 | 27 | 469 | 4.41e-29 | 120 |
| Msa0349050 | AT1G67300.6 | 24.719 | 356 | 225 | 7 | 95 | 433 | 105 | 434 | 5.81e-29 | 119 |
| Msa0349050 | AT1G67300.7 | 24.719 | 356 | 225 | 7 | 95 | 433 | 105 | 434 | 5.81e-29 | 119 |
| Msa0349050 | AT4G16480.2 | 28.732 | 355 | 212 | 10 | 20 | 360 | 24 | 351 | 1.01e-28 | 120 |
| Msa0349050 | AT4G16480.2 | 27.083 | 144 | 96 | 3 | 352 | 486 | 416 | 559 | 4.14e-11 | 65.9 |
| Msa0349050 | AT4G16480.3 | 28.732 | 355 | 212 | 10 | 20 | 360 | 24 | 351 | 1.01e-28 | 120 |
| Msa0349050 | AT4G16480.3 | 27.083 | 144 | 96 | 3 | 352 | 486 | 416 | 559 | 4.14e-11 | 65.9 |
| Msa0349050 | AT4G16480.1 | 28.732 | 355 | 212 | 10 | 20 | 360 | 24 | 351 | 1.01e-28 | 120 |
| Msa0349050 | AT4G16480.1 | 27.083 | 144 | 96 | 3 | 352 | 486 | 416 | 559 | 4.14e-11 | 65.9 |
| Msa0349050 | AT5G27360.4 | 24.048 | 420 | 278 | 8 | 6 | 420 | 18 | 401 | 1.31e-28 | 118 |
| Msa0349050 | AT1G67300.4 | 25.000 | 348 | 218 | 7 | 95 | 425 | 105 | 426 | 3.13e-28 | 117 |
| Msa0349050 | AT1G67300.5 | 25.000 | 348 | 218 | 7 | 95 | 425 | 105 | 426 | 3.13e-28 | 117 |
| Msa0349050 | AT2G35740.1 | 27.635 | 351 | 219 | 10 | 21 | 360 | 24 | 350 | 4.32e-28 | 118 |
| Msa0349050 | AT2G35740.1 | 31.532 | 111 | 75 | 1 | 382 | 491 | 453 | 563 | 2.28e-11 | 66.6 |
| Msa0349050 | AT1G79820.2 | 25.616 | 406 | 260 | 15 | 95 | 484 | 108 | 487 | 7.08e-26 | 111 |
| Msa0349050 | AT1G79820.1 | 25.616 | 406 | 260 | 15 | 95 | 484 | 108 | 487 | 7.08e-26 | 111 |
| Msa0349050 | AT1G54730.4 | 25.176 | 425 | 244 | 10 | 29 | 442 | 38 | 399 | 3.14e-25 | 108 |
| Msa0349050 | AT1G08920.3 | 21.609 | 435 | 298 | 9 | 18 | 446 | 27 | 424 | 2.72e-24 | 105 |
| Msa0349050 | AT1G54730.9 | 26.065 | 399 | 238 | 10 | 29 | 414 | 38 | 392 | 2.83e-24 | 105 |
| Msa0349050 | AT1G54730.7 | 26.065 | 399 | 238 | 10 | 29 | 414 | 38 | 392 | 2.83e-24 | 105 |
| Msa0349050 | AT3G05155.2 | 24.412 | 340 | 221 | 10 | 16 | 353 | 20 | 325 | 4.10e-23 | 100 |
| Msa0349050 | AT5G17010.2 | 23.689 | 515 | 268 | 16 | 7 | 484 | 10 | 436 | 4.04e-22 | 99.4 |
| Msa0349050 | AT3G20460.1 | 22.030 | 404 | 296 | 7 | 85 | 484 | 95 | 483 | 1.51e-21 | 98.2 |
| Msa0349050 | AT1G79820.4 | 24.566 | 346 | 236 | 11 | 95 | 433 | 108 | 435 | 2.24e-21 | 97.1 |
| Msa0349050 | AT1G54730.11 | 26.786 | 336 | 195 | 8 | 29 | 353 | 38 | 333 | 1.24e-20 | 93.6 |
| Msa0349050 | AT2G48020.3 | 25.067 | 375 | 234 | 10 | 2 | 368 | 7 | 342 | 2.56e-19 | 90.1 |
| Msa0349050 | AT2G48020.4 | 25.066 | 379 | 234 | 11 | 2 | 372 | 7 | 343 | 1.08e-18 | 88.6 |
| Msa0349050 | AT1G54730.8 | 24.561 | 399 | 223 | 11 | 29 | 414 | 38 | 371 | 2.24e-18 | 87.4 |
| Msa0349050 | AT3G51490.1 | 26.556 | 241 | 156 | 7 | 23 | 262 | 4 | 224 | 8.45e-18 | 87.4 |
| Msa0349050 | AT3G51490.2 | 26.556 | 241 | 156 | 7 | 23 | 262 | 4 | 224 | 8.99e-18 | 87.0 |
| Msa0349050 | AT3G51490.2 | 26.271 | 236 | 152 | 7 | 261 | 481 | 486 | 714 | 4.66e-12 | 68.9 |
| Msa0349050 | AT1G54730.10 | 25.559 | 313 | 185 | 7 | 29 | 330 | 38 | 313 | 1.64e-17 | 84.0 |
| Msa0349050 | AT1G54730.6 | 25.559 | 313 | 185 | 7 | 29 | 330 | 38 | 313 | 1.64e-17 | 84.0 |
| Msa0349050 | AT3G51490.3 | 29.480 | 173 | 119 | 3 | 91 | 262 | 4 | 174 | 5.42e-17 | 84.7 |
| Msa0349050 | AT3G51490.3 | 26.271 | 236 | 152 | 7 | 261 | 481 | 436 | 664 | 5.14e-12 | 68.9 |
| Msa0349050 | AT1G79820.3 | 21.662 | 397 | 239 | 10 | 95 | 484 | 108 | 439 | 2.26e-16 | 82.0 |
| Msa0349050 | AT1G20840.2 | 30.435 | 161 | 109 | 3 | 103 | 262 | 64 | 222 | 2.02e-14 | 76.6 |
| Msa0349050 | AT1G20840.1 | 30.435 | 161 | 109 | 3 | 103 | 262 | 64 | 222 | 2.02e-14 | 76.6 |
| Msa0349050 | AT4G35300.9 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.29e-13 | 72.0 |
| Msa0349050 | AT4G35300.2 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.29e-13 | 72.0 |
| Msa0349050 | AT4G35300.3 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.29e-13 | 72.0 |
| Msa0349050 | AT4G35300.4 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.98e-13 | 71.6 |
| Msa0349050 | AT4G35300.8 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.98e-13 | 71.6 |
| Msa0349050 | AT4G35300.6 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.98e-13 | 71.6 |
| Msa0349050 | AT4G35300.11 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.98e-13 | 71.6 |
| Msa0349050 | AT4G35300.1 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.98e-13 | 71.6 |
| Msa0349050 | AT4G35300.10 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.98e-13 | 71.6 |
| Msa0349050 | AT4G35300.7 | 30.058 | 173 | 118 | 3 | 91 | 262 | 54 | 224 | 6.98e-13 | 71.6 |
Find 91 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATGCTGTTTGGTGTTTC+TGG | 0.080373 | 3_1:+12231714 | None:intergenic |
| ATTGGAACATTCTTGGTTTC+TGG | 0.128771 | 3_1:+12230964 | None:intergenic |
| AACATCATGTGTCCCTCTTA+TGG | 0.226396 | 3_1:+12231647 | None:intergenic |
| CTTTGTAAGATGTTCTTAAA+TGG | 0.233729 | 3_1:+12231567 | None:intergenic |
| GCCATTTCTGATAGATATAA+TGG | 0.247787 | 3_1:+12231918 | None:intergenic |
| ATACTTGGTCGTGTTCTTCT+TGG | 0.258509 | 3_1:-12232724 | Msa0349050:CDS |
| AAATAGGATTGGAGCATAAA+AGG | 0.275402 | 3_1:+12231470 | None:intergenic |
| GGTTATGATATAGGAATTTC+AGG | 0.277570 | 3_1:-12233891 | Msa0349050:intron |
| TGGAATTGGCTTTGCTAATC+AGG | 0.280534 | 3_1:-12232698 | Msa0349050:intron |
| GGTGGTGCTGCATTCCTTAT+TGG | 0.287192 | 3_1:-12232787 | Msa0349050:CDS |
| TTGCTCAATTGGAACATTCT+TGG | 0.300336 | 3_1:+12230957 | None:intergenic |
| ATGTTATGTCATTTCAAGTA+TGG | 0.305249 | 3_1:-12231048 | Msa0349050:CDS |
| ATTATCTTCGGTTATGATAT+AGG | 0.305759 | 3_1:-12233900 | Msa0349050:CDS |
| ACCCTATCCATTTGCTCAAT+TGG | 0.305882 | 3_1:+12230946 | None:intergenic |
| CTTGTTGTCTTGTTTCATCT+TGG | 0.317999 | 3_1:+12232945 | None:intergenic |
| ACATGATACTTGCTTCAATA+AGG | 0.321693 | 3_1:+12231607 | None:intergenic |
| GTTCTTCTTGGAGTTGGAAT+TGG | 0.324453 | 3_1:-12232712 | Msa0349050:CDS |
| TATTGTGATTCTCTCTTGTA+TGG | 0.347026 | 3_1:-12233940 | Msa0349050:CDS |
| TCTTGTATGGTGGCTGCCAC+TGG | 0.347170 | 3_1:-12233927 | Msa0349050:CDS |
| AAGCAAAGAAAGATGCTAAA+AGG | 0.350210 | 3_1:+12232854 | None:intergenic |
| CCTCTTCCATTGCTTGCAAT+TGG | 0.356504 | 3_1:+12233984 | None:intergenic |
| CATTGATTCCTGTGAATTGT+TGG | 0.356994 | 3_1:+12231499 | None:intergenic |
| TTCATCTTGGTGTATACATC+TGG | 0.359272 | 3_1:+12232958 | None:intergenic |
| TTCTTCTCACAAATTCTAAT+AGG | 0.359757 | 3_1:-12231303 | Msa0349050:CDS |
| TTGATATGCATTTATGTTGC+CGG | 0.361579 | 3_1:-12231210 | Msa0349050:CDS |
| CACCAAGAGCTGCTCCAATA+AGG | 0.370888 | 3_1:+12232773 | None:intergenic |
| CCAGCTACAATCCTCACTTT+AGG | 0.378444 | 3_1:-12231750 | Msa0349050:CDS |
| TTCCTTATTGGAGCAGCTCT+TGG | 0.384601 | 3_1:-12232775 | Msa0349050:CDS |
| TTGAGCAAATGGATAGGGTT+TGG | 0.386241 | 3_1:-12230942 | Msa0349050:CDS |
| ATATAGACCTCAACTTGTTA+TGG | 0.392956 | 3_1:-12231541 | Msa0349050:CDS |
| TTGCCGGATTTGCTTGGTCA+TGG | 0.394117 | 3_1:-12231194 | Msa0349050:CDS |
| TTATGCTGTTTGGTGTTTCT+GGG | 0.396973 | 3_1:+12231715 | None:intergenic |
| GCACCACCTACAAGAATTGA+TGG | 0.406112 | 3_1:+12232802 | None:intergenic |
| TGCCGGATTTGCTTGGTCAT+GGG | 0.407730 | 3_1:-12231193 | Msa0349050:CDS |
| TCAGCAAATTTAATCAACTT+TGG | 0.416918 | 3_1:-12231831 | Msa0349050:CDS |
| GAATGTTCCAATTGAGCAAA+TGG | 0.420157 | 3_1:-12230953 | Msa0349050:CDS |
| AGAAAAGATCAAAGACGGTT+GGG | 0.422002 | 3_1:-12231805 | Msa0349050:CDS |
| GCAGTTATGGTAGGGATTGT+AGG | 0.422925 | 3_1:-12231408 | Msa0349050:CDS |
| CCCATTATATCTATCAGAAA+TGG | 0.423439 | 3_1:-12231919 | Msa0349050:CDS |
| TCATCAATCACAAGAGCCTT+TGG | 0.425277 | 3_1:-12232832 | Msa0349050:CDS |
| GGTCGTGTTCTTCTTGGAGT+TGG | 0.425536 | 3_1:-12232718 | Msa0349050:CDS |
| GCCACTGGAGGCATTATCTT+CGG | 0.431033 | 3_1:-12233912 | Msa0349050:CDS |
| AATTCTAATAGGAAGTATAA+TGG | 0.436111 | 3_1:-12231292 | Msa0349050:CDS |
| TTCCAACTATGTGTTGGAAT+TGG | 0.441232 | 3_1:-12231861 | Msa0349050:CDS |
| CTTATTGGAGCAGCTCTTGG+TGG | 0.464561 | 3_1:-12232772 | Msa0349050:CDS |
| CTAGGAACCAACCATCCTAA+TGG | 0.475289 | 3_1:+12231168 | None:intergenic |
| TTAATGCTGCAATCCATAAG+AGG | 0.481457 | 3_1:-12231660 | Msa0349050:CDS |
| CCATTTCTGATAGATATAAT+GGG | 0.482018 | 3_1:+12231919 | None:intergenic |
| CACCAATTCCAACACATAGT+TGG | 0.488485 | 3_1:+12231859 | None:intergenic |
| GCCGGATTTGCTTGGTCATG+GGG | 0.494733 | 3_1:-12231192 | Msa0349050:CDS |
| TGATGTTCAACAAGAATTTG+AGG | 0.494949 | 3_1:-12231631 | Msa0349050:CDS |
| TCCAATTGAGCAAATGGATA+GGG | 0.497217 | 3_1:-12230947 | Msa0349050:CDS |
| ATTGTTGGAGACAAGATTGA+AGG | 0.501127 | 3_1:-12230895 | Msa0349050:CDS |
| TGCAGGTGGTGTAACATCAA+TGG | 0.504221 | 3_1:-12233004 | Msa0349050:intron |
| ATACAAGAGAGAATCACAAT+AGG | 0.504849 | 3_1:+12233942 | None:intergenic |
| GTGATGAAGTGAATGTTGTT+AGG | 0.505701 | 3_1:+12232890 | None:intergenic |
| AGTATAATGGCAGCACAACT+TGG | 0.520104 | 3_1:-12231279 | Msa0349050:CDS |
| ACTTCATCACTATATATAGC+TGG | 0.520261 | 3_1:-12232877 | Msa0349050:CDS |
| ATGGCACTTCCACGATATAG+AGG | 0.524579 | 3_1:-12231900 | Msa0349050:CDS |
| AATATATACATGCTAATACT+TGG | 0.530434 | 3_1:-12232739 | Msa0349050:CDS |
| GCAGCACAACTTGGTGATCA+TGG | 0.536187 | 3_1:-12231270 | Msa0349050:CDS |
| CCTAAAGTGAGGATTGTAGC+TGG | 0.537334 | 3_1:+12231750 | None:intergenic |
| CAGAAAAGATCAAAGACGGT+TGG | 0.543560 | 3_1:-12231806 | Msa0349050:CDS |
| GAGCTACCAATTGCAAGCAA+TGG | 0.546840 | 3_1:-12233990 | Msa0349050:CDS |
| CGCAAACCATCAATTCTTGT+AGG | 0.548548 | 3_1:-12232808 | Msa0349050:CDS |
| AATGGCTTCCAACTATGTGT+TGG | 0.553875 | 3_1:-12231867 | Msa0349050:CDS |
| TGTAGCTGGAACTGCTGCCA+TGG | 0.558668 | 3_1:+12231764 | None:intergenic |
| AATTGATGGTTTGCGACCAA+AGG | 0.563264 | 3_1:+12232816 | None:intergenic |
| GAAAAGATCAAAGACGGTTG+GGG | 0.563993 | 3_1:-12231804 | Msa0349050:CDS |
| TTTATGTTGCCGGATTTGCT+TGG | 0.566712 | 3_1:-12231200 | Msa0349050:CDS |
| AAGTGAATGTTGTTAGGAGT+TGG | 0.571646 | 3_1:+12232896 | None:intergenic |
| TTGATTGCTCCTCTATATCG+TGG | 0.577605 | 3_1:+12231891 | None:intergenic |
| TGTGATTCTCTCTTGTATGG+TGG | 0.579802 | 3_1:-12233937 | Msa0349050:CDS |
| TTCCAATTGAGCAAATGGAT+AGG | 0.581303 | 3_1:-12230948 | Msa0349050:CDS |
| TGCAACTGTAATACTTTGCG+CGG | 0.587190 | 3_1:+12231116 | None:intergenic |
| CCAATTGCAAGCAATGGAAG+AGG | 0.588796 | 3_1:-12233984 | Msa0349050:CDS |
| AGATCAAAGACGGTTGGGGA+TGG | 0.591219 | 3_1:-12231800 | Msa0349050:CDS |
| TGTATGGTGGCTGCCACTGG+AGG | 0.591273 | 3_1:-12233924 | Msa0349050:CDS |
| GGTACAGAAAAGATCAAAGA+CGG | 0.591721 | 3_1:-12231810 | Msa0349050:CDS |
| AGCACTTTCACCTAATCCAA+TGG | 0.595224 | 3_1:+12231443 | None:intergenic |
| TAATGCTGCAATCCATAAGA+GGG | 0.599903 | 3_1:-12231659 | Msa0349050:CDS |
| AGCAATGGAAGAGGATACAA+TGG | 0.603683 | 3_1:-12233975 | Msa0349050:CDS |
| GCTATTGCCATAACAAGTTG+AGG | 0.605625 | 3_1:+12231534 | None:intergenic |
| ATGCTTATAGTCGATAAACT+AGG | 0.611635 | 3_1:-12231363 | Msa0349050:CDS |
| CCGGATTTGCTTGGTCATGG+GGG | 0.615253 | 3_1:-12231191 | Msa0349050:CDS |
| ATGGCGAATTTCTCTAGCCA+TGG | 0.615608 | 3_1:-12231781 | Msa0349050:CDS |
| AAACCATCAATTCTTGTAGG+TGG | 0.619483 | 3_1:-12232805 | Msa0349050:CDS |
| GCGGCTGATCTAATCTCCAA+TGG | 0.626357 | 3_1:+12231135 | None:intergenic |
| ACCGAAGATAATGCCTCCAG+TGG | 0.655294 | 3_1:+12233911 | None:intergenic |
| TATAGAGGAGCAATCAACAA+TGG | 0.661294 | 3_1:-12231885 | Msa0349050:CDS |
| GATTGAAGGCAAACACACTG+TGG | 0.740057 | 3_1:-12230881 | Msa0349050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCTATAATAACTATATAA+GGG | + | chr3_1:12231319-12231338 | None:intergenic | 10.0% |
| !! | ACTTCAAATTTAAAAATTTA+AGG | + | chr3_1:12231621-12231640 | None:intergenic | 10.0% |
| !! | GTATCTATAATAACTATATA+AGG | + | chr3_1:12231320-12231339 | None:intergenic | 15.0% |
| !!! | AATCTACAGTTTTTTTTTAT+AGG | + | chr3_1:12231480-12231499 | None:intergenic | 15.0% |
| !!! | ATTTAAAGATTATTTGGTTT+TGG | + | chr3_1:12231653-12231672 | None:intergenic | 15.0% |
| !! | GAAATATGTAAGTTAATATA+TGG | - | chr3_1:12232302-12232321 | Msa0349050:intron | 15.0% |
| !!! | AATGAATATTTTTATCTAGT+CGG | - | chr3_1:12232396-12232415 | Msa0349050:intron | 15.0% |
| !! | ATATTGTATGAAAATTAAGT+GGG | + | chr3_1:12232560-12232579 | None:intergenic | 15.0% |
| !! | AATATTGTATGAAAATTAAG+TGG | + | chr3_1:12232561-12232580 | None:intergenic | 15.0% |
| !!! | AAATTTTAAGATGATATCAT+AGG | + | chr3_1:12232687-12232706 | None:intergenic | 15.0% |
| !! | TATGATATCATCTTAAAATT+TGG | - | chr3_1:12232686-12232705 | Msa0349050:intron | 15.0% |
| !! | ATGATATCATCTTAAAATTT+GGG | - | chr3_1:12232687-12232706 | Msa0349050:intron | 15.0% |
| !!! | TTTTTTTGGAAAAAAATTGT+TGG | - | chr3_1:12233965-12233984 | Msa0349050:CDS | 15.0% |
| !! | ATATAAGGGATCAAAAATAT+TGG | + | chr3_1:12231305-12231324 | None:intergenic | 20.0% |
| !! | ACTATACAAAATAGATGATA+TGG | - | chr3_1:12231549-12231568 | Msa0349050:CDS | 20.0% |
| !! | AAAAGTCATTGAAATTACAT+GGG | - | chr3_1:12231586-12231605 | Msa0349050:CDS | 20.0% |
| !! | CTCGTAATTTAAAGATTATT+TGG | + | chr3_1:12231659-12231678 | None:intergenic | 20.0% |
| !! | CAAATAATCTTTAAATTACG+AGG | - | chr3_1:12231657-12231676 | Msa0349050:CDS | 20.0% |
| !!! | AAATCCAAAGTTTTTTTACA+TGG | - | chr3_1:12231683-12231702 | Msa0349050:CDS | 20.0% |
| !!! | AATCCAAAGTTTTTTTACAT+GGG | - | chr3_1:12231684-12231703 | Msa0349050:CDS | 20.0% |
| !! | CAAAAAGAGAAAAAAATTGA+AGG | + | chr3_1:12231853-12231872 | None:intergenic | 20.0% |
| !! | AATATATACATGCTAATACT+TGG | - | chr3_1:12232136-12232155 | Msa0349050:intron | 20.0% |
| !! | GTTCTTAAAAACATTGTAAT+TGG | + | chr3_1:12232215-12232234 | None:intergenic | 20.0% |
| !! | CACTAAAATTTCTAAATATG+TGG | + | chr3_1:12232273-12232292 | None:intergenic | 20.0% |
| !! | GATGATTAAAAGTTCAAAAT+TGG | + | chr3_1:12232796-12232815 | None:intergenic | 20.0% |
| !! | TATTAAGCTCTTTAATTCAT+TGG | - | chr3_1:12232858-12232877 | Msa0349050:CDS | 20.0% |
| !! | ACATTAACATAAACTTTAGA+TGG | - | chr3_1:12232903-12232922 | Msa0349050:CDS | 20.0% |
| !!! | AATTCTAATAGGAAGTATAA+TGG | - | chr3_1:12233583-12233602 | Msa0349050:intron | 20.0% |
| ! | ATTATCTTCGGTTATGATAT+AGG | - | chr3_1:12230975-12230994 | Msa0349050:CDS | 25.0% |
| ! | GAAAAGATAATGAAGTTGAA+TGG | + | chr3_1:12231021-12231040 | None:intergenic | 25.0% |
| !! | CTTGAATCTTTATTTGATTG+TGG | + | chr3_1:12231085-12231104 | None:intergenic | 25.0% |
| ! | AAGATTGTTATCGCAAAAAA+TGG | + | chr3_1:12231371-12231390 | None:intergenic | 25.0% |
| ! | AAAATAGATGATATGGTATG+AGG | - | chr3_1:12231556-12231575 | Msa0349050:CDS | 25.0% |
| ! | AAATAGATGATATGGTATGA+GGG | - | chr3_1:12231557-12231576 | Msa0349050:CDS | 25.0% |
| !! | CATGTAATTTCAATGACTTT+TGG | + | chr3_1:12231587-12231606 | None:intergenic | 25.0% |
| ! | CAAAAGTCATTGAAATTACA+TGG | - | chr3_1:12231585-12231604 | Msa0349050:CDS | 25.0% |
| ! | AAAGTCATTGAAATTACATG+GGG | - | chr3_1:12231587-12231606 | Msa0349050:CDS | 25.0% |
| ! | TATCCCATGTAAAAAAACTT+TGG | + | chr3_1:12231690-12231709 | None:intergenic | 25.0% |
| ! | TAAATCAAAATTTGCCCAAA+TGG | - | chr3_1:12231708-12231727 | Msa0349050:CDS | 25.0% |
| !!! | CAATTTTTTTCTCTTTTTGC+AGG | - | chr3_1:12231854-12231873 | Msa0349050:CDS | 25.0% |
| ! | ATTAAAAAGTGAAGTGTGTT+TGG | + | chr3_1:12232431-12232450 | None:intergenic | 25.0% |
| ! | TTAGACTATGATAAGTAAGA+CGG | - | chr3_1:12232452-12232471 | Msa0349050:intron | 25.0% |
| !! | TCACTTATAAACTCATTTTC+AGG | - | chr3_1:12232759-12232778 | Msa0349050:CDS | 25.0% |
| ! | CCATTTCTGATAGATATAAT+GGG | + | chr3_1:12232959-12232978 | None:intergenic | 25.0% |
| ! | TCAGCAAATTTAATCAACTT+TGG | - | chr3_1:12233044-12233063 | Msa0349050:intron | 25.0% |
| ! | CTTTGTAAGATGTTCTTAAA+TGG | + | chr3_1:12233311-12233330 | None:intergenic | 25.0% |
| ! | CTAATCCAATGGTTAAAAAT+AGG | + | chr3_1:12233424-12233443 | None:intergenic | 25.0% |
| !!! | CTATTTTTAACCATTGGATT+AGG | - | chr3_1:12233422-12233441 | Msa0349050:intron | 25.0% |
| ! | TTCTTCTCACAAATTCTAAT+AGG | - | chr3_1:12233572-12233591 | Msa0349050:intron | 25.0% |
| !! | ATGTTATGTCATTTCAAGTA+TGG | - | chr3_1:12233827-12233846 | Msa0349050:intron | 25.0% |
| !!! | TATGGAACTTTCTTCTTTTT+TGG | - | chr3_1:12233845-12233864 | Msa0349050:intron | 25.0% |
| !!! | TTTGGAGAGAACATTTTTTT+TGG | - | chr3_1:12233951-12233970 | Msa0349050:CDS | 25.0% |
| ATACAAGAGAGAATCACAAT+AGG | + | chr3_1:12230936-12230955 | None:intergenic | 30.0% | |
| TATTGTGATTCTCTCTTGTA+TGG | - | chr3_1:12230935-12230954 | Msa0349050:CDS | 30.0% | |
| GGTTATGATATAGGAATTTC+AGG | - | chr3_1:12230984-12231003 | Msa0349050:CDS | 30.0% | |
| !!! | TTTTTTTCTCTTTTTGCAGG+TGG | - | chr3_1:12231857-12231876 | Msa0349050:CDS | 30.0% |
| GGAAAAAACTTCTCCAAAAA+TGG | + | chr3_1:12231899-12231918 | None:intergenic | 30.0% | |
| ACTTCATCACTATATATAGC+TGG | - | chr3_1:12231998-12232017 | Msa0349050:intron | 30.0% | |
| AAGCAAAGAAAGATGCTAAA+AGG | + | chr3_1:12232024-12232043 | None:intergenic | 30.0% | |
| ATGATGAGAAAGAGAGATAA+TGG | - | chr3_1:12232236-12232255 | Msa0349050:intron | 30.0% | |
| GGATCTCTTAAAATTTGTGT+TGG | - | chr3_1:12232487-12232506 | Msa0349050:intron | 30.0% | |
| AGCTCTTTAATTCATTGGAT+TGG | - | chr3_1:12232863-12232882 | Msa0349050:CDS | 30.0% | |
| GCTCTTTAATTCATTGGATT+GGG | - | chr3_1:12232864-12232883 | Msa0349050:CDS | 30.0% | |
| ! | AAAAGTTTCTTTTCTTCTGC+AGG | - | chr3_1:12232929-12232948 | Msa0349050:CDS | 30.0% |
| CCCATTATATCTATCAGAAA+TGG | - | chr3_1:12232956-12232975 | Msa0349050:CDS | 30.0% | |
| GCCATTTCTGATAGATATAA+TGG | + | chr3_1:12232960-12232979 | None:intergenic | 30.0% | |
| !!! | TTTGATGGTTTTTGCTGTTT+TGG | + | chr3_1:12233187-12233206 | None:intergenic | 30.0% |
| !! | GCATTAACTTAGCTTTTTGA+TGG | + | chr3_1:12233202-12233221 | None:intergenic | 30.0% |
| TGATGTTCAACAAGAATTTG+AGG | - | chr3_1:12233244-12233263 | Msa0349050:intron | 30.0% | |
| ACATGATACTTGCTTCAATA+AGG | + | chr3_1:12233271-12233290 | None:intergenic | 30.0% | |
| !! | ATATAGACCTCAACTTGTTA+TGG | - | chr3_1:12233334-12233353 | Msa0349050:intron | 30.0% |
| AAATAGGATTGGAGCATAAA+AGG | + | chr3_1:12233408-12233427 | None:intergenic | 30.0% | |
| CCAATGGTTAAAAATAGGAT+TGG | + | chr3_1:12233419-12233438 | None:intergenic | 30.0% | |
| !!! | CCAATCCTATTTTTAACCAT+TGG | - | chr3_1:12233416-12233435 | Msa0349050:intron | 30.0% |
| !! | TTCACTTTTATCTGCAGTTA+TGG | - | chr3_1:12233454-12233473 | Msa0349050:intron | 30.0% |
| ! | TTTTATCTGCAGTTATGGTA+GGG | - | chr3_1:12233459-12233478 | Msa0349050:intron | 30.0% |
| ATGCTTATAGTCGATAAACT+AGG | - | chr3_1:12233512-12233531 | Msa0349050:intron | 30.0% | |
| TTGATATGCATTTATGTTGC+CGG | - | chr3_1:12233665-12233684 | Msa0349050:intron | 30.0% | |
| !!! | TTTCTTCTTTTTTGGAGGTT+GGG | - | chr3_1:12233853-12233872 | Msa0349050:intron | 30.0% |
| AGATACAAGTAGTGTACAAG+TGG | - | chr3_1:12231334-12231353 | Msa0349050:CDS | 35.0% | |
| GTCTTTACATCACTGTCATT+TGG | - | chr3_1:12231435-12231454 | Msa0349050:CDS | 35.0% | |
| AAAATTTGCCCAAATGGCAT+AGG | - | chr3_1:12231714-12231733 | Msa0349050:CDS | 35.0% | |
| AAATTTGCCCAAATGGCATA+GGG | - | chr3_1:12231715-12231734 | Msa0349050:CDS | 35.0% | |
| !!! | AACATCAATGGTGCCATTTT+TGG | - | chr3_1:12231883-12231902 | Msa0349050:CDS | 35.0% |
| ! | TTCATCTTGGTGTATACATC+TGG | + | chr3_1:12231920-12231939 | None:intergenic | 35.0% |
| !! | CTTGTTGTCTTGTTTCATCT+TGG | + | chr3_1:12231933-12231952 | None:intergenic | 35.0% |
| AAGTGAATGTTGTTAGGAGT+TGG | + | chr3_1:12231982-12232001 | None:intergenic | 35.0% | |
| GTGATGAAGTGAATGTTGTT+AGG | + | chr3_1:12231988-12232007 | None:intergenic | 35.0% | |
| AAACCATCAATTCTTGTAGG+TGG | - | chr3_1:12232070-12232089 | Msa0349050:intron | 35.0% | |
| AACTCTTCGACCTAATAGAT+CGG | + | chr3_1:12232358-12232377 | None:intergenic | 35.0% | |
| TATTAGGTCGAAGAGTTTCA+AGG | - | chr3_1:12232361-12232380 | Msa0349050:intron | 35.0% | |
| GTAAGACGGTGAAATATGAA+TGG | - | chr3_1:12232466-12232485 | Msa0349050:intron | 35.0% | |
| ACATTCTTCTTCTCACAAGT+CGG | + | chr3_1:12232738-12232757 | None:intergenic | 35.0% | |
| GTCAGTGTAAAACATGTTCA+TGG | - | chr3_1:12232821-12232840 | Msa0349050:CDS | 35.0% | |
| ! | TGGATTGGGTACTATTATCT+TGG | - | chr3_1:12232878-12232897 | Msa0349050:CDS | 35.0% |
| TATAGAGGAGCAATCAACAA+TGG | - | chr3_1:12232990-12233009 | Msa0349050:CDS | 35.0% | |
| TTCCAACTATGTGTTGGAAT+TGG | - | chr3_1:12233014-12233033 | Msa0349050:intron | 35.0% | |
| GGTACAGAAAAGATCAAAGA+CGG | - | chr3_1:12233065-12233084 | Msa0349050:intron | 35.0% | |
| AGAAAAGATCAAAGACGGTT+GGG | - | chr3_1:12233070-12233089 | Msa0349050:intron | 35.0% | |
| GAAAAAATGCTCCTAAAGTG+AGG | + | chr3_1:12233139-12233158 | None:intergenic | 35.0% | |
| !! | TTATGCTGTTTGGTGTTTCT+GGG | + | chr3_1:12233163-12233182 | None:intergenic | 35.0% |
| !! | ATTATGCTGTTTGGTGTTTC+TGG | + | chr3_1:12233164-12233183 | None:intergenic | 35.0% |
| !! | CTGTTTTGGATTATGCTGTT+TGG | + | chr3_1:12233173-12233192 | None:intergenic | 35.0% |
| TTAATGCTGCAATCCATAAG+AGG | - | chr3_1:12233215-12233234 | Msa0349050:intron | 35.0% | |
| TAATGCTGCAATCCATAAGA+GGG | - | chr3_1:12233216-12233235 | Msa0349050:intron | 35.0% | |
| CCTGTGAATTGTTGGAAAAA+AGG | + | chr3_1:12233371-12233390 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTCCAACAATTCAC+AGG | - | chr3_1:12233368-12233387 | Msa0349050:intron | 35.0% |
| !! | CATTGATTCCTGTGAATTGT+TGG | + | chr3_1:12233379-12233398 | None:intergenic | 35.0% |
| ! | CTTTTATCTGCAGTTATGGT+AGG | - | chr3_1:12233458-12233477 | Msa0349050:intron | 35.0% |
| !!! | CGAAGAGTTTTGTTCATATC+AGG | - | chr3_1:12233536-12233555 | Msa0349050:intron | 35.0% |
| !!! | AGAGTTTTGTTCATATCAGG+TGG | - | chr3_1:12233539-12233558 | Msa0349050:intron | 35.0% |
| ! | TCCTAGTGAGATTTTTCCAT+TGG | - | chr3_1:12233724-12233743 | Msa0349050:intron | 35.0% |
| TCCAATGGAAAAATCTCACT+AGG | + | chr3_1:12233728-12233747 | None:intergenic | 35.0% | |
| !!! | GGAACTTTCTTCTTTTTTGG+AGG | - | chr3_1:12233848-12233867 | Msa0349050:intron | 35.0% |
| !!! | CTTTCTTCTTTTTTGGAGGT+TGG | - | chr3_1:12233852-12233871 | Msa0349050:intron | 35.0% |
| ATTGGAACATTCTTGGTTTC+TGG | + | chr3_1:12233914-12233933 | None:intergenic | 35.0% | |
| TTGCTCAATTGGAACATTCT+TGG | + | chr3_1:12233921-12233940 | None:intergenic | 35.0% | |
| GAATGTTCCAATTGAGCAAA+TGG | - | chr3_1:12233922-12233941 | Msa0349050:CDS | 35.0% | |
| TTCCAATTGAGCAAATGGAT+AGG | - | chr3_1:12233927-12233946 | Msa0349050:CDS | 35.0% | |
| TCCAATTGAGCAAATGGATA+GGG | - | chr3_1:12233928-12233947 | Msa0349050:CDS | 35.0% | |
| ATTGTTGGAGACAAGATTGA+AGG | - | chr3_1:12233980-12233999 | Msa0349050:CDS | 35.0% | |
| AGCAATGGAAGAGGATACAA+TGG | - | chr3_1:12230900-12230919 | Msa0349050:CDS | 40.0% | |
| TGTGATTCTCTCTTGTATGG+TGG | - | chr3_1:12230938-12230957 | Msa0349050:CDS | 40.0% | |
| ! | GTGTTTACCCTATGCCATTT+GGG | + | chr3_1:12231725-12231744 | None:intergenic | 40.0% |
| TCATCAATCACAAGAGCCTT+TGG | - | chr3_1:12232043-12232062 | Msa0349050:intron | 40.0% | |
| ! | AATTGATGGTTTGCGACCAA+AGG | + | chr3_1:12232062-12232081 | None:intergenic | 40.0% |
| CGCAAACCATCAATTCTTGT+AGG | - | chr3_1:12232067-12232086 | Msa0349050:intron | 40.0% | |
| ATACTTGGTCGTGTTCTTCT+TGG | - | chr3_1:12232151-12232170 | Msa0349050:intron | 40.0% | |
| GTTCTTCTTGGAGTTGGAAT+TGG | - | chr3_1:12232163-12232182 | Msa0349050:intron | 40.0% | |
| !! | TGGAATTGGCTTTGCTAATC+AGG | - | chr3_1:12232177-12232196 | Msa0349050:intron | 40.0% |
| ! | GAGAGATAATGGCACTCTTT+AGG | - | chr3_1:12232247-12232266 | Msa0349050:intron | 40.0% |
| TAGGACAAGACCGATCTATT+AGG | - | chr3_1:12232345-12232364 | Msa0349050:intron | 40.0% | |
| !! | AAATCGACTTGTAGAGGTGA+GGG | - | chr3_1:12232528-12232547 | Msa0349050:intron | 40.0% |
| ACGTCACACTCTAAATGTCT+GGG | + | chr3_1:12232619-12232638 | None:intergenic | 40.0% | |
| !! | TCTCACAAGTCGGTTTTGTA+TGG | + | chr3_1:12232728-12232747 | None:intergenic | 40.0% |
| TTGATTGCTCCTCTATATCG+TGG | + | chr3_1:12232987-12233006 | None:intergenic | 40.0% | |
| AATGGCTTCCAACTATGTGT+TGG | - | chr3_1:12233008-12233027 | Msa0349050:intron | 40.0% | |
| CACCAATTCCAACACATAGT+TGG | + | chr3_1:12233019-12233038 | None:intergenic | 40.0% | |
| CAGAAAAGATCAAAGACGGT+TGG | - | chr3_1:12233069-12233088 | Msa0349050:intron | 40.0% | |
| GAAAAGATCAAAGACGGTTG+GGG | - | chr3_1:12233071-12233090 | Msa0349050:intron | 40.0% | |
| AACATCATGTGTCCCTCTTA+TGG | + | chr3_1:12233231-12233250 | None:intergenic | 40.0% | |
| GCTATTGCCATAACAAGTTG+AGG | + | chr3_1:12233344-12233363 | None:intergenic | 40.0% | |
| AGCACTTTCACCTAATCCAA+TGG | + | chr3_1:12233435-12233454 | None:intergenic | 40.0% | |
| AGTATAATGGCAGCACAACT+TGG | - | chr3_1:12233596-12233615 | Msa0349050:intron | 40.0% | |
| ! | TTTATGTTGCCGGATTTGCT+TGG | - | chr3_1:12233675-12233694 | Msa0349050:intron | 40.0% |
| TGCAACTGTAATACTTTGCG+CGG | + | chr3_1:12233762-12233781 | None:intergenic | 40.0% | |
| ACCCTATCCATTTGCTCAAT+TGG | + | chr3_1:12233932-12233951 | None:intergenic | 40.0% | |
| TTGAGCAAATGGATAGGGTT+TGG | - | chr3_1:12233933-12233952 | Msa0349050:CDS | 40.0% | |
| GAGCTACCAATTGCAAGCAA+TGG | - | chr3_1:12230885-12230904 | Msa0349050:CDS | 45.0% | |
| CCTCTTCCATTGCTTGCAAT+TGG | + | chr3_1:12230894-12230913 | None:intergenic | 45.0% | |
| CCAATTGCAAGCAATGGAAG+AGG | - | chr3_1:12230891-12230910 | Msa0349050:CDS | 45.0% | |
| CGTGTTTACCCTATGCCATT+TGG | + | chr3_1:12231726-12231745 | None:intergenic | 45.0% | |
| TGCAGGTGGTGTAACATCAA+TGG | - | chr3_1:12231871-12231890 | Msa0349050:CDS | 45.0% | |
| GCACCACCTACAAGAATTGA+TGG | + | chr3_1:12232076-12232095 | None:intergenic | 45.0% | |
| TTCCTTATTGGAGCAGCTCT+TGG | - | chr3_1:12232100-12232119 | Msa0349050:intron | 45.0% | |
| ! | CCTCTACAAGTCGATTTCAC+AGG | + | chr3_1:12232525-12232544 | None:intergenic | 45.0% |
| !! | CCTGTGAAATCGACTTGTAG+AGG | - | chr3_1:12232522-12232541 | Msa0349050:intron | 45.0% |
| !! | GAAATCGACTTGTAGAGGTG+AGG | - | chr3_1:12232527-12232546 | Msa0349050:intron | 45.0% |
| TCTAAATGTCTGGGCATGAG+GGG | + | chr3_1:12232610-12232629 | None:intergenic | 45.0% | |
| CTCTAAATGTCTGGGCATGA+GGG | + | chr3_1:12232611-12232630 | None:intergenic | 45.0% | |
| ACTCTAAATGTCTGGGCATG+AGG | + | chr3_1:12232612-12232631 | None:intergenic | 45.0% | |
| CACGTCACACTCTAAATGTC+TGG | + | chr3_1:12232620-12232639 | None:intergenic | 45.0% | |
| ! | CATTTAGAGTGTGACGTGAG+TGG | - | chr3_1:12232622-12232641 | Msa0349050:intron | 45.0% |
| ATGGCACTTCCACGATATAG+AGG | - | chr3_1:12232975-12232994 | Msa0349050:CDS | 45.0% | |
| ATGGCGAATTTCTCTAGCCA+TGG | - | chr3_1:12233094-12233113 | Msa0349050:intron | 45.0% | |
| CCTAAAGTGAGGATTGTAGC+TGG | + | chr3_1:12233128-12233147 | None:intergenic | 45.0% | |
| CCAGCTACAATCCTCACTTT+AGG | - | chr3_1:12233125-12233144 | Msa0349050:intron | 45.0% | |
| GCAGTTATGGTAGGGATTGT+AGG | - | chr3_1:12233467-12233486 | Msa0349050:intron | 45.0% | |
| CTAGGAACCAACCATCCTAA+TGG | + | chr3_1:12233710-12233729 | None:intergenic | 45.0% | |
| !!! | CTTCTTTTTTGGAGGTTGGG+TGG | - | chr3_1:12233856-12233875 | Msa0349050:intron | 45.0% |
| GATTGAAGGCAAACACACTG+TGG | - | chr3_1:12233994-12234013 | Msa0349050:CDS | 45.0% | |
| !! | GCCACTGGAGGCATTATCTT+CGG | - | chr3_1:12230963-12230982 | Msa0349050:CDS | 50.0% |
| ACCGAAGATAATGCCTCCAG+TGG | + | chr3_1:12230967-12230986 | None:intergenic | 50.0% | |
| !! | GGTGGTGCTGCATTCCTTAT+TGG | - | chr3_1:12232088-12232107 | Msa0349050:intron | 50.0% |
| CACCAAGAGCTGCTCCAATA+AGG | + | chr3_1:12232105-12232124 | None:intergenic | 50.0% | |
| CTTATTGGAGCAGCTCTTGG+TGG | - | chr3_1:12232103-12232122 | Msa0349050:intron | 50.0% | |
| GGTCGTGTTCTTCTTGGAGT+TGG | - | chr3_1:12232157-12232176 | Msa0349050:intron | 50.0% | |
| TGCCTTTATGACACGCTGCT+AGG | - | chr3_1:12232326-12232345 | Msa0349050:intron | 50.0% | |
| GTCCTAGCAGCGTGTCATAA+AGG | + | chr3_1:12232331-12232350 | None:intergenic | 50.0% | |
| CTAAATGTCTGGGCATGAGG+GGG | + | chr3_1:12232609-12232628 | None:intergenic | 50.0% | |
| AGATCAAAGACGGTTGGGGA+TGG | - | chr3_1:12233075-12233094 | Msa0349050:intron | 50.0% | |
| ! | GCAGCACAACTTGGTGATCA+TGG | - | chr3_1:12233605-12233624 | Msa0349050:intron | 50.0% |
| ! | TTGCCGGATTTGCTTGGTCA+TGG | - | chr3_1:12233681-12233700 | Msa0349050:intron | 50.0% |
| ! | TGCCGGATTTGCTTGGTCAT+GGG | - | chr3_1:12233682-12233701 | Msa0349050:intron | 50.0% |
| GCGGCTGATCTAATCTCCAA+TGG | + | chr3_1:12233743-12233762 | None:intergenic | 50.0% | |
| TCTTGTATGGTGGCTGCCAC+TGG | - | chr3_1:12230948-12230967 | Msa0349050:CDS | 55.0% | |
| TGTAGCTGGAACTGCTGCCA+TGG | + | chr3_1:12233114-12233133 | None:intergenic | 55.0% | |
| ! | GCCGGATTTGCTTGGTCATG+GGG | - | chr3_1:12233683-12233702 | Msa0349050:intron | 55.0% |
| CCCCCATGACCAAGCAAATC+CGG | + | chr3_1:12233687-12233706 | None:intergenic | 55.0% | |
| ! | CCGGATTTGCTTGGTCATGG+GGG | - | chr3_1:12233684-12233703 | Msa0349050:intron | 55.0% |
| ATGGGGGCCATTAGGATGGT+TGG | - | chr3_1:12233700-12233719 | Msa0349050:intron | 55.0% | |
| TGTATGGTGGCTGCCACTGG+AGG | - | chr3_1:12230951-12230970 | Msa0349050:CDS | 60.0% | |
| TGACGTGAGTGGCCCGATAG+CGG | - | chr3_1:12232633-12232652 | Msa0349050:intron | 60.0% | |
| TGAGCTACCCAGCCCGCTAT+CGG | + | chr3_1:12232649-12232668 | None:intergenic | 60.0% | |
| !! | TAGCGGGCTGGGTAGCTCAA+CGG | - | chr3_1:12232650-12232669 | Msa0349050:intron | 60.0% |
| GCTTGGTCATGGGGGCCATT+AGG | - | chr3_1:12233692-12233711 | Msa0349050:intron | 60.0% | |
| GGTCATGGGGGCCATTAGGA+TGG | - | chr3_1:12233696-12233715 | Msa0349050:intron | 60.0% | |
| GACGTGAGTGGCCCGATAGC+GGG | - | chr3_1:12232634-12232653 | Msa0349050:intron | 65.0% | |
| GAGCTACCCAGCCCGCTATC+GGG | + | chr3_1:12232648-12232667 | None:intergenic | 65.0% | |
| !! | TGAGTGGCCCGATAGCGGGC+TGG | - | chr3_1:12232638-12232657 | Msa0349050:intron | 70.0% |
| !! | GAGTGGCCCGATAGCGGGCT+GGG | - | chr3_1:12232639-12232658 | Msa0349050:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 12230873 | 12234024 | 12230873 | ID=Msa0349050;Name=Msa0349050 |
| chr3_1 | mRNA | 12230873 | 12234024 | 12230873 | ID=Msa0349050-mRNA-1;Parent=Msa0349050;Name=Msa0349050-mRNA-1;_AED=0.57;_eAED=0.57;_QI=0|0|0|0.33|1|1|3|0|509 |
| chr3_1 | exon | 12233892 | 12234024 | 12233892 | ID=Msa0349050-mRNA-1:exon:3206;Parent=Msa0349050-mRNA-1 |
| chr3_1 | exon | 12232699 | 12233021 | 12232699 | ID=Msa0349050-mRNA-1:exon:3205;Parent=Msa0349050-mRNA-1 |
| chr3_1 | exon | 12230873 | 12231946 | 12230873 | ID=Msa0349050-mRNA-1:exon:3204;Parent=Msa0349050-mRNA-1 |
| chr3_1 | CDS | 12233892 | 12234024 | 12233892 | ID=Msa0349050-mRNA-1:cds;Parent=Msa0349050-mRNA-1 |
| chr3_1 | CDS | 12232699 | 12233021 | 12232699 | ID=Msa0349050-mRNA-1:cds;Parent=Msa0349050-mRNA-1 |
| chr3_1 | CDS | 12230873 | 12231946 | 12230873 | ID=Msa0349050-mRNA-1:cds;Parent=Msa0349050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
