AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1209790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1209790 MtrunA17_Chr4g0058961 98.134 268 3 1 1 268 1 266 0.0 538
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 100 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACCATTTGGTGTGCTTAA+TGG 0.176666 8_1:+68393746 None:intergenic
CAGAAAATGTATTCTCAAAA+TGG 0.231231 8_1:+68392899 None:intergenic
CCAAGCAGAGCGAGAGAAAA+TGG 0.241394 8_1:+68393037 None:intergenic
AACAGTGTCATCTGAGTTAT+TGG 0.256742 8_1:+68394110 None:intergenic
GTTTGGAATTGGGTGGTTAA+TGG 0.263795 8_1:+68396428 None:intergenic
TACCATTTGGTGTGCTTAAT+GGG 0.275902 8_1:+68393747 None:intergenic
TGAGTACTCAAAACTAGTTC+TGG 0.277502 8_1:+68393778 None:intergenic
CGCGGGTATGGTTTGGAATT+GGG 0.290188 8_1:+68396418 None:intergenic
CTTTATTAGCATATGGAGTA+TGG 0.292955 8_1:-68392955 Msa1209790:three_prime_UTR
ATGTATTCTCAAAATGGTTT+TGG 0.302401 8_1:+68392905 None:intergenic
TCGCGGGTATGGTTTGGAAT+TGG 0.314261 8_1:+68396417 None:intergenic
CACGACAAGGACTAAGTCTA+AGG 0.315715 8_1:-68396490 Msa1209790:five_prime_UTR
TTCATCTTATCTAGGGAGTC+AGG 0.329309 8_1:-68394215 Msa1209790:intron
AATGCTATTTGCTTAAAGTT+TGG 0.330878 8_1:+68392632 None:intergenic
GCGTTTAAGGAGGCTAATTA+AGG 0.341665 8_1:-68395960 Msa1209790:CDS
TTTGGCGGGTTTGCGGTTGA+TGG 0.351768 8_1:-68396297 Msa1209790:CDS
TCCTGTTCGCGGGTATGGTT+TGG 0.355689 8_1:+68396411 None:intergenic
ACACTGTTCAACTTCTTAGA+AGG 0.361403 8_1:-68394095 Msa1209790:CDS
GTTCTTACCATTCTACCATT+TGG 0.375872 8_1:+68393734 None:intergenic
GTTAAGTAGTACCAAGAGTT+TGG 0.384169 8_1:-68396315 Msa1209790:CDS
GTTGTGTCTTTATTAGCATA+TGG 0.414514 8_1:-68392962 Msa1209790:three_prime_UTR
AGCCTCCTTAAACGCAAAAC+AGG 0.417473 8_1:+68395968 None:intergenic
TAGAAAAGTGAATCAATTGA+TGG 0.417595 8_1:-68392750 Msa1209790:three_prime_UTR
CTAGTTCTGGGAAGAAGTAC+TGG 0.429029 8_1:+68393791 None:intergenic
CCAAGAGTTTGGCGGGTTTG+CGG 0.430302 8_1:-68396304 Msa1209790:CDS
TGAAATCCTAAGTTACTAAT+CGG 0.437849 8_1:+68396466 None:intergenic
CCGCAAACCCGCCAAACTCT+TGG 0.454081 8_1:+68396304 None:intergenic
TGCTCTCTTGAAACAACAAA+TGG 0.454342 8_1:-68396144 Msa1209790:CDS
GGTGGCATGTAGTAATAATT+CGG 0.455634 8_1:-68396219 Msa1209790:CDS
CAAGCAGAGCGAGAGAAAAT+GGG 0.456582 8_1:+68393038 None:intergenic
TCCAAACCATACCCGCGAAC+AGG 0.460317 8_1:-68396412 Msa1209790:five_prime_UTR
ATTGAACACTAGCACTGTTA+AGG 0.461893 8_1:-68392612 Msa1209790:three_prime_UTR
AGGGAGTCAGGGTTCAAGTC+AGG 0.469382 8_1:-68394203 Msa1209790:CDS
TAAAGTTTGGTTGACACACT+TGG 0.471542 8_1:+68392645 None:intergenic
TTGGCGGGTTTGCGGTTGAT+GGG 0.472771 8_1:-68396296 Msa1209790:CDS
GGATCATAACCGATGCTAAC+GGG 0.473221 8_1:-68394068 Msa1209790:CDS
GATAGAAATGAGGTTGAACT+TGG 0.475178 8_1:+68396182 None:intergenic
AGTCAGGAGTGTATATATAG+AGG 0.482751 8_1:-68394187 Msa1209790:CDS
GCTTAAGTTGTTTGAAGAAG+AGG 0.484114 8_1:-68395993 Msa1209790:CDS
GTTCAACCTCATTTCTATCT+CGG 0.485915 8_1:-68396178 Msa1209790:CDS
GAGTACTCAAAACTAGTTCT+GGG 0.486792 8_1:+68393779 None:intergenic
AATTGCTGATGAGAGATTCC+AGG 0.487924 8_1:-68395933 Msa1209790:intron
AAACAACCATGTAGAGGAAG+TGG 0.491734 8_1:-68392714 Msa1209790:three_prime_UTR
CAGGATCAGTGAGGACGATA+AGG 0.493142 8_1:-68396393 Msa1209790:five_prime_UTR
TACCAATGTTGTAGCATCAC+TGG 0.493572 8_1:+68394798 None:intergenic
TAAGGGCCGATTAGTAACTT+AGG 0.496752 8_1:-68396472 Msa1209790:five_prime_UTR
TTCTGATCTCCCGTTAGCAT+CGG 0.500995 8_1:+68394059 None:intergenic
TGTTTCCATCCTCACAAAAG+AGG 0.501332 8_1:-68392779 Msa1209790:three_prime_UTR
TTCAACTTCTTAGAAGGCAC+TGG 0.506775 8_1:-68394089 Msa1209790:CDS
ATGATCCATGTTGATAAAGT+AGG 0.511158 8_1:-68393088 Msa1209790:CDS
ATATGGAGTATGGGAAAGGA+AGG 0.515399 8_1:-68392945 Msa1209790:three_prime_UTR
TGCTGCAGTTCAATCTCAAA+TGG 0.516025 8_1:+68392997 None:intergenic
CATGTAGAGGAAGTGGATGT+TGG 0.516444 8_1:-68392707 Msa1209790:three_prime_UTR
AAGCACACCAAATGGTAGAA+TGG 0.516600 8_1:-68393741 Msa1209790:intron
CCTTGTCGTGAGGGTATTCA+CGG 0.521240 8_1:+68396503 None:intergenic
TTTATTAGCATATGGAGTAT+GGG 0.523677 8_1:-68392954 Msa1209790:three_prime_UTR
GTCCTCACTGATCCTGTTCG+CGG 0.533143 8_1:+68396400 None:intergenic
CAACATCCACTTCCTCTACA+TGG 0.535643 8_1:+68392708 None:intergenic
TGCCCATTAAGCACACCAAA+TGG 0.537654 8_1:-68393749 Msa1209790:CDS
GGAAGAAGTCAGCCTTCGAA+AGG 0.539009 8_1:-68394165 Msa1209790:CDS
AAGTAGTACCAAGAGTTTGG+CGG 0.543463 8_1:-68396312 Msa1209790:CDS
TTCCAGTGATGCTACAACAT+TGG 0.545070 8_1:-68394800 Msa1209790:intron
AGTAGTACCAAGAGTTTGGC+GGG 0.546540 8_1:-68396311 Msa1209790:CDS
TAGACTTAGTCCTTGTCGTG+AGG 0.547003 8_1:+68396493 None:intergenic
TGGCTACAGCATTGAGCACA+AGG 0.547464 8_1:+68392680 None:intergenic
GTCAGGAGTGTATATATAGA+GGG 0.549148 8_1:-68394186 Msa1209790:CDS
AATAAAGACACAACCTCTGA+AGG 0.552604 8_1:+68392971 None:intergenic
AACTGCAGCATCACCTTCAG+AGG 0.556856 8_1:-68392984 Msa1209790:three_prime_UTR
TCATCTTATCTAGGGAGTCA+GGG 0.560049 8_1:-68394214 Msa1209790:intron
AGCATTGTTATAGGATTACA+AGG 0.560344 8_1:-68396038 Msa1209790:intron
GTTTCCATCCTCACAAAAGA+GGG 0.565257 8_1:-68392778 Msa1209790:three_prime_UTR
AGACTTAGTCCTTGTCGTGA+GGG 0.566194 8_1:+68396494 None:intergenic
CAATAGCAATAGCATGGTGG+TGG 0.572915 8_1:-68396237 Msa1209790:CDS
GCAATGATCGCATTAAATGA+AGG 0.573531 8_1:+68393061 None:intergenic
TCCTCACTGATCCTGTTCGC+GGG 0.578364 8_1:+68396401 None:intergenic
TAGCATATGGAGTATGGGAA+AGG 0.580865 8_1:-68392949 Msa1209790:three_prime_UTR
TTGTTGTTTCAAGAGAGCAT+AGG 0.596200 8_1:+68396148 None:intergenic
GCGAGGGTGAAGAGAAGAGG+TGG 0.597970 8_1:-68396266 Msa1209790:CDS
GAAGCGAGGGTGAAGAGAAG+AGG 0.598413 8_1:-68396269 Msa1209790:CDS
ACGGGAGATCAGAAAATGTA+CGG 0.603434 8_1:-68394050 Msa1209790:intron
AAAGTAAGACGAACATAACG+TGG 0.614721 8_1:+68392554 None:intergenic
GGAAGGGTTATCGTTCTCAC+CGG 0.616398 8_1:-68392928 Msa1209790:three_prime_UTR
TGGATCATAACCGATGCTAA+CGG 0.617395 8_1:-68394069 Msa1209790:CDS
GGTTGATGGGTCAAGAAGCG+AGG 0.619722 8_1:-68396283 Msa1209790:CDS
GGGTATGGTTTGGAATTGGG+TGG 0.620236 8_1:+68396421 None:intergenic
GAAGAAGTCAGCCTTCGAAA+GGG 0.621978 8_1:-68394164 Msa1209790:CDS
GTTGATGGGTCAAGAAGCGA+GGG 0.632798 8_1:-68396282 Msa1209790:CDS
CCGTGAATACCCTCACGACA+AGG 0.633405 8_1:-68396503 Msa1209790:five_prime_UTR
TTGAGTCCGAGATAGAAATG+AGG 0.635687 8_1:+68396172 None:intergenic
GGAAGTAGCTGCTAAATCTG+AGG 0.636191 8_1:-68396123 Msa1209790:intron
ACGACAAGGACTAAGTCTAA+GGG 0.636404 8_1:-68396489 Msa1209790:five_prime_UTR
CAATAGCAATAGCAATAGCA+TGG 0.638289 8_1:-68396243 Msa1209790:CDS
GCGAGCCTACTTTATCAACA+TGG 0.641796 8_1:+68393083 None:intergenic
AAGCAGAGCGAGAGAAAATG+GGG 0.642561 8_1:+68393039 None:intergenic
ACACTAGCACTGTTAAGGTA+CGG 0.648551 8_1:-68392607 Msa1209790:three_prime_UTR
AACTTGAAACAACCATGTAG+AGG 0.661717 8_1:-68392720 Msa1209790:three_prime_UTR
TATGGAGTATGGGAAAGGAA+GGG 0.689548 8_1:-68392944 Msa1209790:three_prime_UTR
AAGTAAGACGAACATAACGT+GGG 0.702901 8_1:+68392555 None:intergenic
TAGCAATAGCAATAGCATGG+TGG 0.729970 8_1:-68396240 Msa1209790:CDS
ACCCGCGAACAGGATCAGTG+AGG 0.787875 8_1:-68396402 Msa1209790:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACACTTAATTAAAAATTGT+GGG - chr8_1:68393385-68393404 Msa1209790:intron 15.0%
!!! ATTTAATTTCATCTTATCTA+GGG - chr8_1:68394827-68394846 Msa1209790:CDS 15.0%
!!! ATTCATTCTTTACTATTTTA+TGG - chr8_1:68395032-68395051 Msa1209790:intron 15.0%
!!! AATTAAACAATATTCTAAAG+CGG + chr8_1:68395604-68395623 None:intergenic 15.0%
!!! TTTTATTTCATAATATGGTA+TGG + chr8_1:68395813-68395832 None:intergenic 15.0%
!!! AAAAGGAGTATATTTTGAAA+GGG + chr8_1:68393194-68393213 None:intergenic 20.0%
!! AATGCATTACAATATTCAAT+AGG - chr8_1:68393272-68393291 Msa1209790:intron 20.0%
!! TTAAGTGTACAAAAAATACA+AGG + chr8_1:68393439-68393458 None:intergenic 20.0%
!! GTACACTTAATTAAAAATTG+TGG - chr8_1:68393384-68393403 Msa1209790:intron 20.0%
!! TTAAGTGTACAAAAAATACA+AGG - chr8_1:68393439-68393458 Msa1209790:intron 20.0%
!! AAATTTGAACTCTGTAAATA+TGG + chr8_1:68393908-68393927 None:intergenic 20.0%
!! TTTATTGAATTGTGAAACAT+AGG + chr8_1:68393966-68393985 None:intergenic 20.0%
!! TATATCTTCATTTGTGTATT+CGG - chr8_1:68394121-68394140 Msa1209790:CDS 20.0%
!!! TTCTTTGATTTAAGCTATAT+TGG - chr8_1:68394321-68394340 Msa1209790:intron 20.0%
!!! AAAGACATGGTATTTTTTAT+AGG + chr8_1:68394546-68394565 None:intergenic 20.0%
!!! AAATACCATGTCTTTAAAAA+TGG - chr8_1:68394551-68394570 Msa1209790:intron 20.0%
!!! TTTTTTCTGAAGATCTTTAA+TGG + chr8_1:68394738-68394757 None:intergenic 20.0%
!! TTAAAGATCTTCAGAAAAAA+AGG - chr8_1:68394738-68394757 Msa1209790:intron 20.0%
!!! TTTTTTCATGTATAAGTTTG+TGG + chr8_1:68394790-68394809 None:intergenic 20.0%
!!! CATTTAATTTCATCTTATCT+AGG - chr8_1:68394826-68394845 Msa1209790:CDS 20.0%
!! TACAACCTACAATATTATAA+GGG + chr8_1:68395440-68395459 None:intergenic 20.0%
!! TTACAACCTACAATATTATA+AGG + chr8_1:68395441-68395460 None:intergenic 20.0%
!! ATAATATTGTAGGTTGTAAT+TGG - chr8_1:68395442-68395461 Msa1209790:intron 20.0%
!!! TAAATTGATAGTTGTTTGTT+TGG + chr8_1:68395782-68395801 None:intergenic 20.0%
! TGAAATCCTAAGTTACTAAT+CGG + chr8_1:68392586-68392605 None:intergenic 25.0%
! TCAATTGTAGAATCTCAAAT+TGG - chr8_1:68392970-68392989 Msa1209790:three_prime_UTR 25.0%
! TAAAGAAAATAATAGACACC+TGG + chr8_1:68393137-68393156 None:intergenic 25.0%
!!! GAAAAGGAGTATATTTTGAA+AGG + chr8_1:68393195-68393214 None:intergenic 25.0%
! ACGCTTTATAATCTATTGTT+AGG + chr8_1:68393336-68393355 None:intergenic 25.0%
! ACTTAATTAAAAATTGTGGG+TGG - chr8_1:68393388-68393407 Msa1209790:intron 25.0%
! CTTAATTAAAAATTGTGGGT+GGG - chr8_1:68393389-68393408 Msa1209790:intron 25.0%
!!! AATACTTTTGAAAACTACAC+CGG - chr8_1:68393580-68393599 Msa1209790:intron 25.0%
! CACATCAATTTGAATATTGT+GGG + chr8_1:68393788-68393807 None:intergenic 25.0%
! TCACATCAATTTGAATATTG+TGG + chr8_1:68393789-68393808 None:intergenic 25.0%
! TTTACAGAGTTCAAATTTGT+TGG - chr8_1:68393910-68393929 Msa1209790:intron 25.0%
! AATTCCACATTCTATCAAAT+CGG - chr8_1:68394057-68394076 Msa1209790:CDS 25.0%
! AATTAGAGATGAAATATGCA+CGG + chr8_1:68394087-68394106 None:intergenic 25.0%
!!! GAACATTTTAAAAAAGAGTG+TGG + chr8_1:68394232-68394251 None:intergenic 25.0%
! CAAAGAAAGAACTATCTATT+AGG + chr8_1:68394308-68394327 None:intergenic 25.0%
! AAAACGAGAATTTACATTCT+AGG + chr8_1:68394362-68394381 None:intergenic 25.0%
! TTTGATTACATCAGTAGAAT+AGG - chr8_1:68394399-68394418 Msa1209790:intron 25.0%
! TTGAAAGAGTTAAAGGATTA+AGG - chr8_1:68394464-68394483 Msa1209790:intron 25.0%
!!! ACATTCCATTTTTAAAGACA+TGG + chr8_1:68394559-68394578 None:intergenic 25.0%
! ATGTTGAATATCATAGACTA+TGG - chr8_1:68394575-68394594 Msa1209790:intron 25.0%
!! AGAAAATTGAACATTTTGTG+AGG + chr8_1:68394646-68394665 None:intergenic 25.0%
!!! AAAAGGTTCGTCTTTTAATT+TGG - chr8_1:68394681-68394700 Msa1209790:intron 25.0%
! TAAGTTTGTGGTGTATAATT+CGG + chr8_1:68394778-68394797 None:intergenic 25.0%
!! TACTTGATTTTCTATATGAC+AGG - chr8_1:68395211-68395230 Msa1209790:intron 25.0%
!! ACTTGATTTTCTATATGACA+GGG - chr8_1:68395212-68395231 Msa1209790:intron 25.0%
!!! TTTTTCCTTTGTTTTTTTCC+TGG - chr8_1:68395344-68395363 Msa1209790:intron 25.0%
! TCAAAACAATTCTTATTACG+CGG + chr8_1:68395396-68395415 None:intergenic 25.0%
! TGATACCCTTATAATATTGT+AGG - chr8_1:68395432-68395451 Msa1209790:intron 25.0%
! CTAACTGTCTAATTGAATAA+TGG + chr8_1:68395517-68395536 None:intergenic 25.0%
! AGATAGTAATATAATCACAG+AGG - chr8_1:68395535-68395554 Msa1209790:intron 25.0%
!!! TTCTGGTTTAATGTCAAATA+TGG + chr8_1:68395908-68395927 None:intergenic 25.0%
! TTTATTAGCATATGGAGTAT+GGG - chr8_1:68396095-68396114 Msa1209790:intron 25.0%
!! ATGTATTCTCAAAATGGTTT+TGG + chr8_1:68396147-68396166 None:intergenic 25.0%
! CAGAAAATGTATTCTCAAAA+TGG + chr8_1:68396153-68396172 None:intergenic 25.0%
!!! CATTTTGAGAATACATTTTC+TGG - chr8_1:68396151-68396170 Msa1209790:CDS 25.0%
! TAGAAAAGTGAATCAATTGA+TGG - chr8_1:68396299-68396318 Msa1209790:CDS 25.0%
!! AATGCTATTTGCTTAAAGTT+TGG + chr8_1:68396420-68396439 None:intergenic 25.0%
TGTAGAATCTCAAATTGGAA+TGG - chr8_1:68392975-68392994 Msa1209790:three_prime_UTR 30.0%
! TAAGAACTGAGCATTGTTAT+AGG - chr8_1:68393002-68393021 Msa1209790:exon 30.0%
AGCATTGTTATAGGATTACA+AGG - chr8_1:68393011-68393030 Msa1209790:exon 30.0%
! ACTCACATGTTACTTAGAAA+AGG + chr8_1:68393211-68393230 None:intergenic 30.0%
TACAAAAAAAGAAACATGCG+AGG - chr8_1:68393300-68393319 Msa1209790:intron 30.0%
ACAAAAAAAGAAACATGCGA+GGG - chr8_1:68393301-68393320 Msa1209790:intron 30.0%
!! GGTGTAGTTTTCAAAAGTAT+TGG + chr8_1:68393581-68393600 None:intergenic 30.0%
TCTTCTACAAAGAGTTCAAA+GGG + chr8_1:68393639-68393658 None:intergenic 30.0%
ATCTTCTACAAAGAGTTCAA+AGG + chr8_1:68393640-68393659 None:intergenic 30.0%
! CTATTTGTGTTTGACACTTT+TGG + chr8_1:68393686-68393705 None:intergenic 30.0%
AATGAGTAAGAGCTATAGAT+TGG + chr8_1:68393855-68393874 None:intergenic 30.0%
AATCCTCAATAAGTTAGACA+GGG - chr8_1:68393876-68393895 Msa1209790:intron 30.0%
!! AGTTCAAATTTGTTGGAGTA+TGG - chr8_1:68393917-68393936 Msa1209790:intron 30.0%
AAAGGAGTTGAAAGAGTTAA+AGG - chr8_1:68394457-68394476 Msa1209790:intron 30.0%
AAGGATTAAGGTTCAAATTC+CGG - chr8_1:68394476-68394495 Msa1209790:intron 30.0%
GTTGTGATCTGTAATGAAAA+TGG - chr8_1:68394707-68394726 Msa1209790:intron 30.0%
AAGTTTGTGGTGTATAATTC+GGG + chr8_1:68394777-68394796 None:intergenic 30.0%
TGTGGATATAAAAGGGAAAA+TGG + chr8_1:68395080-68395099 None:intergenic 30.0%
! ATTTTCCCTTTTATATCCAC+AGG - chr8_1:68395079-68395098 Msa1209790:intron 30.0%
! TTTTCCCTTTTATATCCACA+GGG - chr8_1:68395080-68395099 Msa1209790:intron 30.0%
! AATTTCCAGAGGTTTAAAAC+AGG + chr8_1:68395171-68395190 None:intergenic 30.0%
! CTTGATTTTCTATATGACAG+GGG - chr8_1:68395213-68395232 Msa1209790:intron 30.0%
! TTGATTTTCTATATGACAGG+GGG - chr8_1:68395214-68395233 Msa1209790:intron 30.0%
TATAGCCAGGAAAAAAACAA+AGG + chr8_1:68395352-68395371 None:intergenic 30.0%
AAAACAATTCTTATTACGCG+GGG + chr8_1:68395394-68395413 None:intergenic 30.0%
CAAAACAATTCTTATTACGC+GGG + chr8_1:68395395-68395414 None:intergenic 30.0%
!! GTTTTGAGTGTCTAGATTTA+CGG - chr8_1:68395409-68395428 Msa1209790:intron 30.0%
ACCTTTCTATCACATAGATT+TGG - chr8_1:68395482-68395501 Msa1209790:intron 30.0%
TCCAAATCTATGTGATAGAA+AGG + chr8_1:68395486-68395505 None:intergenic 30.0%
TTCTATCACATAGATTTGGA+TGG - chr8_1:68395486-68395505 Msa1209790:intron 30.0%
TAGTAATATAATCACAGAGG+AGG - chr8_1:68395538-68395557 Msa1209790:intron 30.0%
TTTCCAAATGAGATCTTCAA+CGG + chr8_1:68395707-68395726 None:intergenic 30.0%
! AAATATGGTGGAAACACAAT+CGG + chr8_1:68395893-68395912 None:intergenic 30.0%
TGGTTTAATGTCAAATATGG+TGG + chr8_1:68395905-68395924 None:intergenic 30.0%
! ATGATCCATGTTGATAAAGT+AGG - chr8_1:68395961-68395980 Msa1209790:CDS 30.0%
GTTGTGTCTTTATTAGCATA+TGG - chr8_1:68396087-68396106 Msa1209790:intron 30.0%
CTTTATTAGCATATGGAGTA+TGG - chr8_1:68396094-68396113 Msa1209790:intron 30.0%
ACACTTGGACTCATTAAAAA+TGG + chr8_1:68396392-68396411 None:intergenic 30.0%
!! TGCATTTTGCTATGCTTCTT+TGG + chr8_1:68392705-68392724 None:intergenic 35.0%
GTTAAGTAGTACCAAGAGTT+TGG - chr8_1:68392734-68392753 Msa1209790:three_prime_UTR 35.0%
CAATAGCAATAGCAATAGCA+TGG - chr8_1:68392806-68392825 Msa1209790:three_prime_UTR 35.0%
GGTGGCATGTAGTAATAATT+CGG - chr8_1:68392830-68392849 Msa1209790:three_prime_UTR 35.0%
GATAGAAATGAGGTTGAACT+TGG + chr8_1:68392870-68392889 None:intergenic 35.0%
GTTCAACCTCATTTCTATCT+CGG - chr8_1:68392871-68392890 Msa1209790:three_prime_UTR 35.0%
!! TTGTTGTTTCAAGAGAGCAT+AGG + chr8_1:68392904-68392923 None:intergenic 35.0%
TGCTCTCTTGAAACAACAAA+TGG - chr8_1:68392905-68392924 Msa1209790:three_prime_UTR 35.0%
! GCTTAAGTTGTTTGAAGAAG+AGG - chr8_1:68393056-68393075 Msa1209790:CDS 35.0%
TTCTAAGTAACATGTGAGTG+AGG - chr8_1:68393212-68393231 Msa1209790:intron 35.0%
ACTTAAGAGCTAATCGTTAG+AGG + chr8_1:68393425-68393444 None:intergenic 35.0%
GTATCAAAGTTACACGAGAA+TGG - chr8_1:68393506-68393525 Msa1209790:intron 35.0%
TGTAGAAGATTCACAACCTT+TGG - chr8_1:68393650-68393669 Msa1209790:intron 35.0%
CAATTTGAATATTGTGGGAC+AGG + chr8_1:68393783-68393802 None:intergenic 35.0%
CAATCCTCAATAAGTTAGAC+AGG - chr8_1:68393875-68393894 Msa1209790:intron 35.0%
TTTCCCTGTCTAACTTATTG+AGG + chr8_1:68393882-68393901 None:intergenic 35.0%
TGTGAAACATAGGATCACAT+AGG + chr8_1:68393956-68393975 None:intergenic 35.0%
TTGTTTGAGCTAAGGGTTAA+AGG - chr8_1:68394439-68394458 Msa1209790:intron 35.0%
! GTTAATTTTTCCTCCTTCAC+CGG + chr8_1:68394498-68394517 None:intergenic 35.0%
! CTTTTCGTCTCTAGTAGAAA+AGG - chr8_1:68394664-68394683 Msa1209790:intron 35.0%
GTATAATTCGGGTGAAATAC+AGG + chr8_1:68394766-68394785 None:intergenic 35.0%
! AGTCAGGAGTGTATATATAG+AGG - chr8_1:68394862-68394881 Msa1209790:CDS 35.0%
! GTCAGGAGTGTATATATAGA+GGG - chr8_1:68394863-68394882 Msa1209790:intron 35.0%
! AAAAAGTATAGCCCTTTCGA+AGG + chr8_1:68394899-68394918 None:intergenic 35.0%
AACAGTGTCATCTGAGTTAT+TGG + chr8_1:68394942-68394961 None:intergenic 35.0%
ACACTGTTCAACTTCTTAGA+AGG - chr8_1:68394954-68394973 Msa1209790:intron 35.0%
!! TTTATGGTGTTATGCTTCGA+AGG - chr8_1:68395048-68395067 Msa1209790:intron 35.0%
TTTATTTCCAAAGCTGGATC+AGG + chr8_1:68395146-68395165 None:intergenic 35.0%
!! AAAGACCTGTTTTAAACCTC+TGG - chr8_1:68395163-68395182 Msa1209790:intron 35.0%
TGTTGAACTTGAATTTCCAG+AGG + chr8_1:68395182-68395201 None:intergenic 35.0%
! GAGTACTCAAAACTAGTTCT+GGG + chr8_1:68395273-68395292 None:intergenic 35.0%
TGAGTACTCAAAACTAGTTC+TGG + chr8_1:68395274-68395293 None:intergenic 35.0%
!! TACCATTTGGTGTGCTTAAT+GGG + chr8_1:68395305-68395324 None:intergenic 35.0%
GTTCTTACCATTCTACCATT+TGG + chr8_1:68395318-68395337 None:intergenic 35.0%
AAACAATTCTTATTACGCGG+GGG + chr8_1:68395393-68395412 None:intergenic 35.0%
TCACATAGATTTGGATGGTA+TGG - chr8_1:68395491-68395510 Msa1209790:intron 35.0%
CGGACATATAAACAAAGAGA+AGG + chr8_1:68395584-68395603 None:intergenic 35.0%
TTCCAAATGAGATCTTCAAC+GGG + chr8_1:68395706-68395725 None:intergenic 35.0%
CGTCAAAGCATGTAAAACAT+GGG + chr8_1:68395865-68395884 None:intergenic 35.0%
ACGTCAAAGCATGTAAAACA+TGG + chr8_1:68395866-68395885 None:intergenic 35.0%
TGCAATATGATACAAGGTTC+TGG + chr8_1:68395925-68395944 None:intergenic 35.0%
AGAACCTTGTATCATATTGC+AGG - chr8_1:68395924-68395943 Msa1209790:intron 35.0%
GCAATGATCGCATTAAATGA+AGG + chr8_1:68395991-68396010 None:intergenic 35.0%
AATAAAGACACAACCTCTGA+AGG + chr8_1:68396081-68396100 None:intergenic 35.0%
!!! ATTCTCAAAATGGTTTTGGC+CGG + chr8_1:68396143-68396162 None:intergenic 35.0%
AACTTGAAACAACCATGTAG+AGG - chr8_1:68396329-68396348 Msa1209790:CDS 35.0%
TAAAGTTTGGTTGACACACT+TGG + chr8_1:68396407-68396426 None:intergenic 35.0%
ATTGAACACTAGCACTGTTA+AGG - chr8_1:68396437-68396456 Msa1209790:five_prime_UTR 35.0%
AAGTAAGACGAACATAACGT+GGG + chr8_1:68396497-68396516 None:intergenic 35.0%
AAAGTAAGACGAACATAACG+TGG + chr8_1:68396498-68396517 None:intergenic 35.0%
ACGACAAGGACTAAGTCTAA+GGG - chr8_1:68392560-68392579 Msa1209790:three_prime_UTR 40.0%
TAAGGGCCGATTAGTAACTT+AGG - chr8_1:68392577-68392596 Msa1209790:three_prime_UTR 40.0%
! GTTTGGAATTGGGTGGTTAA+TGG + chr8_1:68392624-68392643 None:intergenic 40.0%
AAGTAGTACCAAGAGTTTGG+CGG - chr8_1:68392737-68392756 Msa1209790:three_prime_UTR 40.0%
TAGCAATAGCAATAGCATGG+TGG - chr8_1:68392809-68392828 Msa1209790:three_prime_UTR 40.0%
TTGAGTCCGAGATAGAAATG+AGG + chr8_1:68392880-68392899 None:intergenic 40.0%
! AGGAACCTGTTTTGCGTTTA+AGG - chr8_1:68393076-68393095 Msa1209790:CDS 40.0%
! AACCTGTTTTGCGTTTAAGG+AGG - chr8_1:68393079-68393098 Msa1209790:CDS 40.0%
GCGTTTAAGGAGGCTAATTA+AGG - chr8_1:68393089-68393108 Msa1209790:CDS 40.0%
AATTGCTGATGAGAGATTCC+AGG - chr8_1:68393116-68393135 Msa1209790:intron 40.0%
TAACTCTCACTCAGATGGTA+TGG - chr8_1:68393247-68393266 Msa1209790:intron 40.0%
CAAAGTTACACGAGAATGGA+AGG - chr8_1:68393510-68393529 Msa1209790:intron 40.0%
!!! TTGGTTTTGCCATCCAGAAA+GGG + chr8_1:68393562-68393581 None:intergenic 40.0%
!!! ATTGGTTTTGCCATCCAGAA+AGG + chr8_1:68393563-68393582 None:intergenic 40.0%
TGAACATGCTTTCTCTCGTT+TGG - chr8_1:68393727-68393746 Msa1209790:intron 40.0%
! TTTGGCCACTTTGCTTAAAG+CGG - chr8_1:68393745-68393764 Msa1209790:CDS 40.0%
! TTTGCTTAAAGCGGCTTTGA+GGG - chr8_1:68393754-68393773 Msa1209790:CDS 40.0%
!! TGTGCCGATTTGATAGAATG+TGG + chr8_1:68394064-68394083 None:intergenic 40.0%
!!! CACACTTCCCTCTTTTTTCT+AGG - chr8_1:68394168-68394187 Msa1209790:CDS 40.0%
GCTGCATCCTAGAAAAAAGA+GGG + chr8_1:68394178-68394197 None:intergenic 40.0%
AGCTGCATCCTAGAAAAAAG+AGG + chr8_1:68394179-68394198 None:intergenic 40.0%
TTCCAGTGATGCTACAACAT+TGG - chr8_1:68394249-68394268 Msa1209790:intron 40.0%
TACCAATGTTGTAGCATCAC+TGG + chr8_1:68394254-68394273 None:intergenic 40.0%
! AGCTCAACTTGTTTGAGCTA+AGG - chr8_1:68394431-68394450 Msa1209790:intron 40.0%
! GCTCAACTTGTTTGAGCTAA+GGG - chr8_1:68394432-68394451 Msa1209790:intron 40.0%
TAAGGTTCAAATTCCGGTGA+AGG - chr8_1:68394482-68394501 Msa1209790:intron 40.0%
! ACCTAGGGAGTATATATCTG+AGG + chr8_1:68394613-68394632 None:intergenic 40.0%
!! TGAGGCTATTCTGAAACCTA+GGG + chr8_1:68394628-68394647 None:intergenic 40.0%
TTCATCTTATCTAGGGAGTC+AGG - chr8_1:68394834-68394853 Msa1209790:CDS 40.0%
TCATCTTATCTAGGGAGTCA+GGG - chr8_1:68394835-68394854 Msa1209790:CDS 40.0%
! TTCAACTTCTTAGAAGGCAC+TGG - chr8_1:68394960-68394979 Msa1209790:intron 40.0%
TGGATCATAACCGATGCTAA+CGG - chr8_1:68394980-68394999 Msa1209790:intron 40.0%
ACGGGAGATCAGAAAATGTA+CGG - chr8_1:68394999-68395018 Msa1209790:intron 40.0%
AGTGCCCTGTGGATATAAAA+GGG + chr8_1:68395087-68395106 None:intergenic 40.0%
AAGTGCCCTGTGGATATAAA+AGG + chr8_1:68395088-68395107 None:intergenic 40.0%
TTATGTACCTGATCCAGCTT+TGG - chr8_1:68395136-68395155 Msa1209790:intron 40.0%
! CAGGTCTTTATTTCCAAAGC+TGG + chr8_1:68395152-68395171 None:intergenic 40.0%
TTTCTATATGACAGGGGGAT+TGG - chr8_1:68395219-68395238 Msa1209790:intron 40.0%
!! CTACCATTTGGTGTGCTTAA+TGG + chr8_1:68395306-68395325 None:intergenic 40.0%
AAGCACACCAAATGGTAGAA+TGG - chr8_1:68395308-68395327 Msa1209790:intron 40.0%
AACAATTCTTATTACGCGGG+GGG + chr8_1:68395392-68395411 None:intergenic 40.0%
ACAAAGAGAAGGATGAACTC+TGG + chr8_1:68395573-68395592 None:intergenic 40.0%
TCAAAGCTTCTGCAGAAATC+CGG + chr8_1:68395673-68395692 None:intergenic 40.0%
AACCCGTTGAAGATCTCATT+TGG - chr8_1:68395701-68395720 Msa1209790:intron 40.0%
CCTTCCTGCAATATGATACA+AGG + chr8_1:68395931-68395950 None:intergenic 40.0%
CCTTGTATCATATTGCAGGA+AGG - chr8_1:68395928-68395947 Msa1209790:intron 40.0%
TGCTGCAGTTCAATCTCAAA+TGG + chr8_1:68396055-68396074 None:intergenic 40.0%
TAGCATATGGAGTATGGGAA+AGG - chr8_1:68396100-68396119 Msa1209790:intron 40.0%
ATATGGAGTATGGGAAAGGA+AGG - chr8_1:68396104-68396123 Msa1209790:intron 40.0%
TATGGAGTATGGGAAAGGAA+GGG - chr8_1:68396105-68396124 Msa1209790:intron 40.0%
TGTTTCCATCCTCACAAAAG+AGG - chr8_1:68396270-68396289 Msa1209790:CDS 40.0%
GTTTCCATCCTCACAAAAGA+GGG - chr8_1:68396271-68396290 Msa1209790:CDS 40.0%
!! CTATTTCTCCCTCTTTTGTG+AGG + chr8_1:68396282-68396301 None:intergenic 40.0%
AAACAACCATGTAGAGGAAG+TGG - chr8_1:68396335-68396354 Msa1209790:exon 40.0%
ACACTAGCACTGTTAAGGTA+CGG - chr8_1:68396442-68396461 Msa1209790:five_prime_UTR 40.0%
AGACTTAGTCCTTGTCGTGA+GGG + chr8_1:68392558-68392577 None:intergenic 45.0%
TAGACTTAGTCCTTGTCGTG+AGG + chr8_1:68392559-68392578 None:intergenic 45.0%
CACGACAAGGACTAAGTCTA+AGG - chr8_1:68392559-68392578 Msa1209790:three_prime_UTR 45.0%
AGTAGTACCAAGAGTTTGGC+GGG - chr8_1:68392738-68392757 Msa1209790:three_prime_UTR 45.0%
CAATAGCAATAGCATGGTGG+TGG - chr8_1:68392812-68392831 Msa1209790:three_prime_UTR 45.0%
GGAAGTAGCTGCTAAATCTG+AGG - chr8_1:68392926-68392945 Msa1209790:three_prime_UTR 45.0%
AGCCTCCTTAAACGCAAAAC+AGG + chr8_1:68393084-68393103 None:intergenic 45.0%
CTGAGTGAGAGTTATGCTCA+CGG + chr8_1:68393241-68393260 None:intergenic 45.0%
GAGCATAACTCTCACTCAGA+TGG - chr8_1:68393242-68393261 Msa1209790:intron 45.0%
! AGTGTGCCATTAACCCTTTC+TGG - chr8_1:68393546-68393565 Msa1209790:intron 45.0%
TGCCATTAACCCTTTCTGGA+TGG - chr8_1:68393550-68393569 Msa1209790:intron 45.0%
TGCCATCCAGAAAGGGTTAA+TGG + chr8_1:68393555-68393574 None:intergenic 45.0%
AAAACTACACCGGTAGACCT+AGG - chr8_1:68393590-68393609 Msa1209790:intron 45.0%
ATAGCAATGTTGCGTCTCCT+AGG + chr8_1:68393610-68393629 None:intergenic 45.0%
!! GATTCACAACCTTTGGTGCT+AGG - chr8_1:68393657-68393676 Msa1209790:intron 45.0%
!!! TTTTGGCTTCCTAGCACCAA+AGG + chr8_1:68393669-68393688 None:intergenic 45.0%
! CAAAGCCGCTTTAAGCAAAG+TGG + chr8_1:68393753-68393772 None:intergenic 45.0%
CTTTGCTTAAAGCGGCTTTG+AGG - chr8_1:68393753-68393772 Msa1209790:CDS 45.0%
GCCTCAGATATATACTCCCT+AGG - chr8_1:68394609-68394628 Msa1209790:intron 45.0%
!! GTGAGGCTATTCTGAAACCT+AGG + chr8_1:68394629-68394648 None:intergenic 45.0%
GAAGAAGTCAGCCTTCGAAA+GGG - chr8_1:68394885-68394904 Msa1209790:intron 45.0%
GGATCATAACCGATGCTAAC+GGG - chr8_1:68394981-68395000 Msa1209790:intron 45.0%
TTCTGATCTCCCGTTAGCAT+CGG + chr8_1:68394993-68395012 None:intergenic 45.0%
GACATTTACTAAGTGCCCTG+TGG + chr8_1:68395098-68395117 None:intergenic 45.0%
!! CTAGTTCTGGGAAGAAGTAC+TGG + chr8_1:68395261-68395280 None:intergenic 45.0%
TGCCCATTAAGCACACCAAA+TGG - chr8_1:68395300-68395319 Msa1209790:intron 45.0%
ACAATTCTTATTACGCGGGG+GGG + chr8_1:68395391-68395410 None:intergenic 45.0%
AAATGTCAACATCGCCCATC+CGG - chr8_1:68395651-68395670 Msa1209790:intron 45.0%
GCGAGCCTACTTTATCAACA+TGG + chr8_1:68395969-68395988 None:intergenic 45.0%
AAGCAGAGCGAGAGAAAATG+GGG + chr8_1:68396013-68396032 None:intergenic 45.0%
CAAGCAGAGCGAGAGAAAAT+GGG + chr8_1:68396014-68396033 None:intergenic 45.0%
! TTCTCCCTCTTTTGTGAGGA+TGG + chr8_1:68396278-68396297 None:intergenic 45.0%
CAACATCCACTTCCTCTACA+TGG + chr8_1:68396344-68396363 None:intergenic 45.0%
CATGTAGAGGAAGTGGATGT+TGG - chr8_1:68396342-68396361 Msa1209790:exon 45.0%
!!! TTTTTTTTTATTTCATAATA+TGG + chr8_1:68395818-68395837 None:intergenic 5.0%
!! CCTTGTCGTGAGGGTATTCA+CGG + chr8_1:68392549-68392568 None:intergenic 50.0%
! GGGTATGGTTTGGAATTGGG+TGG + chr8_1:68392631-68392650 None:intergenic 50.0%
! CGCGGGTATGGTTTGGAATT+GGG + chr8_1:68392634-68392653 None:intergenic 50.0%
! TCGCGGGTATGGTTTGGAAT+TGG + chr8_1:68392635-68392654 None:intergenic 50.0%
CAGGATCAGTGAGGACGATA+AGG - chr8_1:68392656-68392675 Msa1209790:three_prime_UTR 50.0%
! GTTGATGGGTCAAGAAGCGA+GGG - chr8_1:68392767-68392786 Msa1209790:three_prime_UTR 50.0%
ACACGAGAATGGAAGGCAAG+CGG - chr8_1:68393517-68393536 Msa1209790:intron 50.0%
GGTTCAAATTCCGGTGAAGG+AGG - chr8_1:68394485-68394504 Msa1209790:intron 50.0%
GGAAGAAGTCAGCCTTCGAA+AGG - chr8_1:68394884-68394903 Msa1209790:intron 50.0%
GCTTCTGCAGAAATCCGGAT+GGG + chr8_1:68395668-68395687 None:intergenic 50.0%
AGCTTCTGCAGAAATCCGGA+TGG + chr8_1:68395669-68395688 None:intergenic 50.0%
CCAAGCAGAGCGAGAGAAAA+TGG + chr8_1:68396015-68396034 None:intergenic 50.0%
! CCATTTTCTCTCGCTCTGCT+TGG - chr8_1:68396012-68396031 Msa1209790:CDS 50.0%
AACTGCAGCATCACCTTCAG+AGG - chr8_1:68396065-68396084 Msa1209790:intron 50.0%
GGAAGGGTTATCGTTCTCAC+CGG - chr8_1:68396121-68396140 Msa1209790:intron 50.0%
! TGGCTACAGCATTGAGCACA+AGG + chr8_1:68396372-68396391 None:intergenic 50.0%
CCGTGAATACCCTCACGACA+AGG - chr8_1:68392546-68392565 Msa1209790:three_prime_UTR 55.0%
TCCAAACCATACCCGCGAAC+AGG - chr8_1:68392637-68392656 Msa1209790:three_prime_UTR 55.0%
TCCTGTTCGCGGGTATGGTT+TGG + chr8_1:68392641-68392660 None:intergenic 55.0%
ACTGATCCTGTTCGCGGGTA+TGG + chr8_1:68392646-68392665 None:intergenic 55.0%
TCCTCACTGATCCTGTTCGC+GGG + chr8_1:68392651-68392670 None:intergenic 55.0%
GTCCTCACTGATCCTGTTCG+CGG + chr8_1:68392652-68392671 None:intergenic 55.0%
!! CCAAGAGTTTGGCGGGTTTG+CGG - chr8_1:68392745-68392764 Msa1209790:three_prime_UTR 55.0%
!! TTTGGCGGGTTTGCGGTTGA+TGG - chr8_1:68392752-68392771 Msa1209790:three_prime_UTR 55.0%
!! TTGGCGGGTTTGCGGTTGAT+GGG - chr8_1:68392753-68392772 Msa1209790:three_prime_UTR 55.0%
!! GGTTGATGGGTCAAGAAGCG+AGG - chr8_1:68392766-68392785 Msa1209790:three_prime_UTR 55.0%
GAAGCGAGGGTGAAGAGAAG+AGG - chr8_1:68392780-68392799 Msa1209790:three_prime_UTR 55.0%
CACGAGAATGGAAGGCAAGC+GGG - chr8_1:68393518-68393537 Msa1209790:intron 55.0%
GTTGCGTCTCCTAGGTCTAC+CGG + chr8_1:68393602-68393621 None:intergenic 55.0%
AGGGAGTCAGGGTTCAAGTC+AGG - chr8_1:68394846-68394865 Msa1209790:CDS 55.0%
GACAGGGGGATTGGAGTTGT+TGG - chr8_1:68395228-68395247 Msa1209790:intron 55.0%
ATTCTTATTACGCGGGGGGG+CGG + chr8_1:68395388-68395407 None:intergenic 55.0%
ACCCGCGAACAGGATCAGTG+AGG - chr8_1:68392647-68392666 Msa1209790:three_prime_UTR 60.0%
CCGCAAACCCGCCAAACTCT+TGG + chr8_1:68392748-68392767 None:intergenic 60.0%
GCGAGGGTGAAGAGAAGAGG+TGG - chr8_1:68392783-68392802 Msa1209790:three_prime_UTR 60.0%
TTCTTATTACGCGGGGGGGC+GGG + chr8_1:68395387-68395406 None:intergenic 60.0%
GGGCGGGGTGAACTATAGCC+AGG + chr8_1:68395365-68395384 None:intergenic 65.0%
TCTTATTACGCGGGGGGGCG+GGG + chr8_1:68395386-68395405 None:intergenic 65.0%
CTTATTACGCGGGGGGGCGG+GGG + chr8_1:68395385-68395404 None:intergenic 70.0%
! ATTACGCGGGGGGGCGGGGG+CGG + chr8_1:68395382-68395401 None:intergenic 80.0%
! TTACGCGGGGGGGCGGGGGC+GGG + chr8_1:68395381-68395400 None:intergenic 85.0%
! TACGCGGGGGGGCGGGGGCG+GGG + chr8_1:68395380-68395399 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 68392538 68396533 68392538 ID=Msa1209790;Name=Msa1209790
chr8_1 mRNA 68392538 68396533 68392538 ID=Msa1209790-mRNA-1;Parent=Msa1209790;Name=Msa1209790-mRNA-1;_AED=0.08;_eAED=0.08;_QI=182|1|1|1|1|1|6|474|268
chr8_1 exon 68392538 68393125 68392538 ID=Msa1209790-mRNA-1:exon:22770;Parent=Msa1209790-mRNA-1
chr8_1 exon 68393742 68393838 68393742 ID=Msa1209790-mRNA-1:exon:22769;Parent=Msa1209790-mRNA-1
chr8_1 exon 68394051 68394223 68394051 ID=Msa1209790-mRNA-1:exon:22768;Parent=Msa1209790-mRNA-1
chr8_1 exon 68394801 68394881 68394801 ID=Msa1209790-mRNA-1:exon:22767;Parent=Msa1209790-mRNA-1
chr8_1 exon 68395934 68396047 68395934 ID=Msa1209790-mRNA-1:exon:22766;Parent=Msa1209790-mRNA-1
chr8_1 exon 68396124 68396533 68396124 ID=Msa1209790-mRNA-1:exon:22765;Parent=Msa1209790-mRNA-1
chr8_1 five_prime_UTR 68396352 68396533 68396352 ID=Msa1209790-mRNA-1:five_prime_utr;Parent=Msa1209790-mRNA-1
chr8_1 CDS 68396124 68396351 68396124 ID=Msa1209790-mRNA-1:cds;Parent=Msa1209790-mRNA-1
chr8_1 CDS 68395934 68396047 68395934 ID=Msa1209790-mRNA-1:cds;Parent=Msa1209790-mRNA-1
chr8_1 CDS 68394801 68394881 68394801 ID=Msa1209790-mRNA-1:cds;Parent=Msa1209790-mRNA-1
chr8_1 CDS 68394051 68394223 68394051 ID=Msa1209790-mRNA-1:cds;Parent=Msa1209790-mRNA-1
chr8_1 CDS 68393742 68393838 68393742 ID=Msa1209790-mRNA-1:cds;Parent=Msa1209790-mRNA-1
chr8_1 CDS 68393012 68393125 68393012 ID=Msa1209790-mRNA-1:cds;Parent=Msa1209790-mRNA-1
chr8_1 three_prime_UTR 68392538 68393011 68392538 ID=Msa1209790-mRNA-1:three_prime_utr;Parent=Msa1209790-mRNA-1
Gene Sequence

>Msa1209790

ATGCAATCGTTATCGTTAAGTAGTACCAAGAGTTTGGCGGGTTTGCGGTTGATGGGTCAAGAAGCGAGGGTGAAGAGAAGAGGTGGCAATAGCAATAGCAATAGCATGGTGGTGGCATGTAGTAATAATTCGGATAAAGACACTGCTCCAAGTTCAACCTCATTTCTATCTCGGACTCAAACCTATGCTCTCTTGAAACAACAAATGGAAGTAGCTGCTAAATCTGAGGATTACAAGGAAGCTGCTAGAATTCGAGACTCGCTTAAGTTGTTTGAAGAAGAGGAACCTGTTTTGCGTTTAAGGAGGCTAATTAAGGAAGCAATTGCTGATGAGAGATTCCAGGATGCAGCTAGTTATCGTGATGAGCTAAAAAGAATTGCTCCACACTCTTTTTTAAAATGTTCCAGTGATGCTACAACATTGGGAGTCAGGGTTCAAGTCAGGAGTGTATATATAGAGGGAAGAAGTCAGCCTTCGAAAGGGCTATACTTTTTTGCATATAGAATAAGAATTACCAATAACTCAGATGACACTGTTCAACTTCTTAGAAGGCACTGGATCATAACCGATGCTAACGGGAGATCAGAAAATGTACGGGGGATTGGAGTTGTTGGTGAACAGCCAGTACTTCTTCCCAGAACTAGTTTTGAGTACTCATCTGCATGCCCATTAAGCACACCAAATGGTAGAATGGAAGGTGAATATGAGATGATCCATGTTGATAAAGTAGGCTCGCCTTCATTTAATGCGATCATTGCCCCATTTTCTCTCGCTCTGCTTGGAGATGATGACTGCAATACCATTTGA

Protein sequence

>Msa1209790

MQSLSLSSTKSLAGLRLMGQEARVKRRGGNSNSNSMVVACSNNSDKDTAPSSTSFLSRTQTYALLKQQMEVAAKSEDYKEAARIRDSLKLFEEEEPVLRLRRLIKEAIADERFQDAASYRDELKRIAPHSFLKCSSDATTLGVRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDDTVQLLRRHWIITDANGRSENVRGIGVVGEQPVLLPRTSFEYSSACPLSTPNGRMEGEYEMIHVDKVGSPSFNAIIAPFSLALLGDDDCNTI*