Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096020 | XP_003611237.2 | 97.395 | 499 | 13 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1022 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096020 | sp|Q9SB00|PHR_ARATH | 73.805 | 481 | 118 | 4 | 13 | 486 | 6 | 485 | 0.0 | 760 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096020 | G7KG67 | 97.395 | 499 | 13 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1022 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0096020 | 0.808179 | 3.517482e-50 | -8.615850e-47 |
| Msa0005690 | Msa0096020 | 0.826788 | 2.237742e-54 | -8.615850e-47 |
| Msa0006820 | Msa0096020 | 0.803734 | 3.026326e-49 | -8.615850e-47 |
| Msa0018470 | Msa0096020 | 0.800131 | 1.664355e-48 | -8.615850e-47 |
| Msa0020320 | Msa0096020 | 0.813240 | 2.828489e-51 | -8.615850e-47 |
| Msa0032450 | Msa0096020 | 0.840341 | 9.220360e-58 | -8.615850e-47 |
| Msa0039920 | Msa0096020 | 0.862573 | 4.607140e-64 | -8.615850e-47 |
| Msa0040090 | Msa0096020 | 0.857269 | 1.831349e-62 | -8.615850e-47 |
| Msa0041780 | Msa0096020 | 0.807588 | 4.697428e-50 | -8.615850e-47 |
| Msa0042790 | Msa0096020 | 0.821196 | 4.592292e-53 | -8.615850e-47 |
| Msa0049330 | Msa0096020 | 0.800326 | 1.518837e-48 | -8.615850e-47 |
| Msa0057740 | Msa0096020 | 0.809731 | 1.636821e-50 | -8.615850e-47 |
| Msa0064160 | Msa0096020 | 0.818047 | 2.403665e-52 | -8.615850e-47 |
| Msa0064170 | Msa0096020 | 0.823255 | 1.528078e-53 | -8.615850e-47 |
| Msa0064180 | Msa0096020 | 0.825537 | 4.441904e-54 | -8.615850e-47 |
| Msa0072830 | Msa0096020 | 0.827028 | 1.961157e-54 | -8.615850e-47 |
| Msa0072860 | Msa0096020 | 0.828176 | 1.039881e-54 | -8.615850e-47 |
| Msa0085580 | Msa0096020 | 0.803180 | 3.943160e-49 | -8.615850e-47 |
| Msa0087580 | Msa0096020 | 0.862142 | 6.248530e-64 | -8.615850e-47 |
| Msa0087780 | Msa0096020 | 0.832728 | 8.009727e-56 | -8.615850e-47 |
| Msa0087790 | Msa0096020 | 0.811782 | 5.892164e-51 | -8.615850e-47 |
| Msa0096020 | Msa0096510 | 0.832535 | 8.941765e-56 | -8.615850e-47 |
| Msa0096020 | Msa0103060 | 0.810596 | 1.065398e-50 | -8.615850e-47 |
| Msa0096020 | Msa0104390 | 0.808807 | 2.582891e-50 | -8.615850e-47 |
| Msa0096020 | Msa0117300 | 0.800584 | 1.345695e-48 | -8.615850e-47 |
| Msa0096020 | Msa0131090 | 0.815778 | 7.766791e-52 | -8.615850e-47 |
| Msa0096020 | Msa0134300 | 0.862780 | 3.977891e-64 | -8.615850e-47 |
| Msa0096020 | Msa0134380 | 0.845906 | 3.031830e-59 | -8.615850e-47 |
| Msa0096020 | Msa0134390 | 0.805151 | 1.532770e-49 | -8.615850e-47 |
| Msa0096020 | Msa0134400 | 0.820136 | 8.044068e-53 | -8.615850e-47 |
| Msa0096020 | Msa0134420 | 0.815789 | 7.721741e-52 | -8.615850e-47 |
| Msa0096020 | Msa0147540 | 0.801686 | 8.010381e-49 | -8.615850e-47 |
| Msa0096020 | Msa0147800 | 0.814808 | 1.275766e-51 | -8.615850e-47 |
| Msa0096020 | Msa0148430 | 0.827173 | 1.810854e-54 | -8.615850e-47 |
| Msa0096020 | Msa0175720 | 0.817564 | 3.088846e-52 | -8.615850e-47 |
| Msa0096020 | Msa0178700 | 0.809015 | 2.331403e-50 | -8.615850e-47 |
| Msa0096020 | Msa0180590 | 0.818177 | 2.245991e-52 | -8.615850e-47 |
| Msa0096020 | Msa0180600 | 0.857624 | 1.438314e-62 | -8.615850e-47 |
| Msa0096020 | Msa0180780 | 0.842240 | 2.917450e-58 | -8.615850e-47 |
| Msa0096020 | Msa0184330 | 0.806024 | 1.005277e-49 | -8.615850e-47 |
| Msa0096020 | Msa0186510 | 0.823984 | 1.031599e-53 | -8.615850e-47 |
| Msa0096020 | Msa0187980 | 0.814553 | 1.452935e-51 | -8.615850e-47 |
| Msa0096020 | Msa0188500 | 0.807092 | 5.985398e-50 | -8.615850e-47 |
| Msa0096020 | Msa0197730 | 0.842854 | 2.005667e-58 | -8.615850e-47 |
| Msa0096020 | Msa0200840 | 0.812218 | 4.736522e-51 | -8.615850e-47 |
| Msa0096020 | Msa0210880 | 0.827739 | 1.324846e-54 | -8.615850e-47 |
| Msa0096020 | Msa0212730 | 0.803458 | 3.452870e-49 | -8.615850e-47 |
| Msa0096020 | Msa0218430 | 0.825009 | 5.920661e-54 | -8.615850e-47 |
| Msa0096020 | Msa0224400 | 0.809850 | 1.543582e-50 | -8.615850e-47 |
| Msa0096020 | Msa0225880 | 0.812503 | 4.103324e-51 | -8.615850e-47 |
| Msa0096020 | Msa0230980 | 0.828865 | 7.087170e-55 | -8.615850e-47 |
| Msa0096020 | Msa0231590 | 0.807862 | 4.107283e-50 | -8.615850e-47 |
| Msa0096020 | Msa0239610 | 0.840958 | 6.354772e-58 | -8.615850e-47 |
| Msa0096020 | Msa0251150 | 0.804830 | 1.789481e-49 | -8.615850e-47 |
| Msa0096020 | Msa0256430 | 0.800665 | 1.295683e-48 | -8.615850e-47 |
| Msa0096020 | Msa0260470 | 0.820423 | 6.914775e-53 | -8.615850e-47 |
| Msa0096020 | Msa0270460 | 0.842453 | 2.561550e-58 | -8.615850e-47 |
| Msa0096020 | Msa0274950 | -0.808550 | 2.930761e-50 | -8.615850e-47 |
| Msa0096020 | Msa0277250 | 0.814388 | 1.580259e-51 | -8.615850e-47 |
| Msa0096020 | Msa0304110 | 0.820957 | 5.212240e-53 | -8.615850e-47 |
| Msa0096020 | Msa0309060 | 0.813050 | 3.114740e-51 | -8.615850e-47 |
| Msa0096020 | Msa0317360 | 0.847163 | 1.376284e-59 | -8.615850e-47 |
| Msa0096020 | Msa0341190 | 0.825416 | 4.744821e-54 | -8.615850e-47 |
| Msa0096020 | Msa0358720 | 0.806572 | 7.707588e-50 | -8.615850e-47 |
| Msa0096020 | Msa0372990 | 0.815832 | 7.552881e-52 | -8.615850e-47 |
| Msa0096020 | Msa0378670 | 0.850590 | 1.539099e-60 | -8.615850e-47 |
| Msa0096020 | Msa0378700 | 0.861380 | 1.068726e-63 | -8.615850e-47 |
| Msa0096020 | Msa0379540 | 0.852108 | 5.730135e-61 | -8.615850e-47 |
| Msa0096020 | Msa0385770 | 0.810802 | 9.616643e-51 | -8.615850e-47 |
| Msa0096020 | Msa0388200 | 0.806740 | 7.102742e-50 | -8.615850e-47 |
| Msa0096020 | Msa0393140 | 0.812194 | 4.792909e-51 | -8.615850e-47 |
| Msa0096020 | Msa0404220 | 0.826325 | 2.885667e-54 | -8.615850e-47 |
| Msa0096020 | Msa0419040 | 0.828134 | 1.064380e-54 | -8.615850e-47 |
| Msa0096020 | Msa0421390 | 0.803649 | 3.152274e-49 | -8.615850e-47 |
| Msa0096020 | Msa0428310 | 0.841789 | 3.839544e-58 | -8.615850e-47 |
| Msa0096020 | Msa0428330 | 0.833979 | 3.905855e-56 | -8.615850e-47 |
| Msa0096020 | Msa0431940 | 0.836652 | 8.256162e-57 | -8.615850e-47 |
| Msa0096020 | Msa0433670 | 0.800466 | 1.422591e-48 | -8.615850e-47 |
| Msa0096020 | Msa0456480 | 0.850937 | 1.229490e-60 | -8.615850e-47 |
| Msa0096020 | Msa0465640 | 0.817623 | 2.995342e-52 | -8.615850e-47 |
| Msa0096020 | Msa0475400 | 0.840547 | 8.141584e-58 | -8.615850e-47 |
| Msa0096020 | Msa0477550 | 0.801684 | 8.016570e-49 | -8.615850e-47 |
| Msa0096020 | Msa0500490 | 0.810807 | 9.592528e-51 | -8.615850e-47 |
| Msa0096020 | Msa0501350 | 0.802127 | 6.501659e-49 | -8.615850e-47 |
| Msa0096020 | Msa0511600 | 0.825881 | 3.679666e-54 | -8.615850e-47 |
| Msa0096020 | Msa0518480 | 0.822450 | 2.353806e-53 | -8.615850e-47 |
| Msa0096020 | Msa0519060 | 0.828375 | 9.309194e-55 | -8.615850e-47 |
| Msa0096020 | Msa0520810 | 0.846331 | 2.322225e-59 | -8.615850e-47 |
| Msa0096020 | Msa0521570 | 0.806760 | 7.033433e-50 | -8.615850e-47 |
| Msa0096020 | Msa0521940 | -0.868530 | 6.098717e-66 | -8.615850e-47 |
| Msa0096020 | Msa0539270 | 0.800682 | 1.284948e-48 | -8.615850e-47 |
| Msa0096020 | Msa0545230 | 0.832597 | 8.630845e-56 | -8.615850e-47 |
| Msa0096020 | Msa0549330 | 0.850282 | 1.877918e-60 | -8.615850e-47 |
| Msa0096020 | Msa0555960 | 0.818207 | 2.211134e-52 | -8.615850e-47 |
| Msa0096020 | Msa0560370 | 0.808129 | 3.604485e-50 | -8.615850e-47 |
| Msa0096020 | Msa0580540 | 0.969071 | 1.380668e-129 | -8.615850e-47 |
| Msa0096020 | Msa0587290 | 0.836202 | 1.074692e-56 | -8.615850e-47 |
| Msa0096020 | Msa0604640 | 0.832026 | 1.195088e-55 | -8.615850e-47 |
| Msa0096020 | Msa0610360 | 0.828375 | 9.310222e-55 | -8.615850e-47 |
| Msa0096020 | Msa0614980 | 0.825232 | 5.244945e-54 | -8.615850e-47 |
| Msa0096020 | Msa0615850 | 0.800960 | 1.128009e-48 | -8.615850e-47 |
| Msa0096020 | Msa0620750 | 0.800182 | 1.624575e-48 | -8.615850e-47 |
| Msa0096020 | Msa0621780 | 0.950925 | 5.985901e-109 | -8.615850e-47 |
| Msa0096020 | Msa0639030 | 0.816328 | 5.852242e-52 | -8.615850e-47 |
| Msa0096020 | Msa0643020 | -0.804233 | 2.383548e-49 | -8.615850e-47 |
| Msa0096020 | Msa0644770 | -0.800022 | 1.751154e-48 | -8.615850e-47 |
| Msa0096020 | Msa0650890 | 0.831001 | 2.137614e-55 | -8.615850e-47 |
| Msa0096020 | Msa0665150 | 0.831155 | 1.959906e-55 | -8.615850e-47 |
| Msa0096020 | Msa0679780 | 0.820870 | 5.458592e-53 | -8.615850e-47 |
| Msa0096020 | Msa0682730 | -0.811974 | 5.353220e-51 | -8.615850e-47 |
| Msa0096020 | Msa0693400 | 0.834262 | 3.318569e-56 | -8.615850e-47 |
| Msa0096020 | Msa0697600 | 0.835746 | 1.402509e-56 | -8.615850e-47 |
| Msa0096020 | Msa0698900 | 0.810936 | 8.997380e-51 | -8.615850e-47 |
| Msa0096020 | Msa0704780 | 0.825961 | 3.522461e-54 | -8.615850e-47 |
| Msa0096020 | Msa0705050 | 0.811177 | 7.974378e-51 | -8.615850e-47 |
| Msa0096020 | Msa0713210 | 0.850519 | 1.611343e-60 | -8.615850e-47 |
| Msa0096020 | Msa0713220 | 0.836267 | 1.034342e-56 | -8.615850e-47 |
| Msa0096020 | Msa0715510 | -0.844248 | 8.505495e-59 | -8.615850e-47 |
| Msa0096020 | Msa0718920 | 0.820282 | 7.447204e-53 | -8.615850e-47 |
| Msa0096020 | Msa0734760 | 0.803689 | 3.092404e-49 | -8.615850e-47 |
| Msa0096020 | Msa0739610 | 0.821769 | 3.386080e-53 | -8.615850e-47 |
| Msa0096020 | Msa0748980 | 0.835154 | 1.979827e-56 | -8.615850e-47 |
| Msa0096020 | Msa0752830 | 0.802969 | 4.359996e-49 | -8.615850e-47 |
| Msa0096020 | Msa0754350 | 0.977982 | 6.985342e-145 | -8.615850e-47 |
| Msa0096020 | Msa0754840 | 0.804433 | 2.165150e-49 | -8.615850e-47 |
| Msa0096020 | Msa0755090 | 0.825268 | 5.141217e-54 | -8.615850e-47 |
| Msa0096020 | Msa0756410 | 0.830827 | 2.358436e-55 | -8.615850e-47 |
| Msa0096020 | Msa0756440 | 0.818970 | 1.484343e-52 | -8.615850e-47 |
| Msa0096020 | Msa0763350 | 0.835277 | 1.842339e-56 | -8.615850e-47 |
| Msa0096020 | Msa0766030 | 0.808117 | 3.626054e-50 | -8.615850e-47 |
| Msa0096020 | Msa0773290 | 0.803341 | 3.650660e-49 | -8.615850e-47 |
| Msa0096020 | Msa0776290 | 0.809392 | 1.936009e-50 | -8.615850e-47 |
| Msa0096020 | Msa0776590 | 0.815032 | 1.138172e-51 | -8.615850e-47 |
| Msa0096020 | Msa0782030 | 0.812992 | 3.207334e-51 | -8.615850e-47 |
| Msa0096020 | Msa0790640 | 0.814069 | 1.858568e-51 | -8.615850e-47 |
| Msa0096020 | Msa0793060 | 0.816984 | 4.171366e-52 | -8.615850e-47 |
| Msa0096020 | Msa0793100 | 0.805521 | 1.282188e-49 | -8.615850e-47 |
| Msa0096020 | Msa0795710 | 0.951150 | 3.744262e-109 | -8.615850e-47 |
| Msa0096020 | Msa0797000 | 0.810992 | 8.746871e-51 | -8.615850e-47 |
| Msa0096020 | Msa0812970 | 0.806320 | 8.711087e-50 | -8.615850e-47 |
| Msa0096020 | Msa0813630 | 0.823404 | 1.410855e-53 | -8.615850e-47 |
| Msa0096020 | Msa0822370 | 0.823093 | 1.667174e-53 | -8.615850e-47 |
| Msa0096020 | Msa0825520 | 0.826034 | 3.384406e-54 | -8.615850e-47 |
| Msa0096020 | Msa0833450 | 0.923234 | 3.473933e-89 | -8.615850e-47 |
| Msa0096020 | Msa0834160 | 0.809170 | 2.159802e-50 | -8.615850e-47 |
| Msa0096020 | Msa0834460 | 0.813332 | 2.699960e-51 | -8.615850e-47 |
| Msa0096020 | Msa0835550 | 0.831206 | 1.903381e-55 | -8.615850e-47 |
| Msa0096020 | Msa0848720 | 0.805224 | 1.479782e-49 | -8.615850e-47 |
| Msa0096020 | Msa0861480 | 0.823542 | 1.309512e-53 | -8.615850e-47 |
| Msa0096020 | Msa0861560 | 0.821315 | 4.310956e-53 | -8.615850e-47 |
| Msa0096020 | Msa0861800 | 0.805275 | 1.444337e-49 | -8.615850e-47 |
| Msa0096020 | Msa0864730 | 0.828868 | 7.077224e-55 | -8.615850e-47 |
| Msa0096020 | Msa0864750 | 0.827067 | 1.919214e-54 | -8.615850e-47 |
| Msa0096020 | Msa0876030 | 0.813553 | 2.415309e-51 | -8.615850e-47 |
| Msa0096020 | Msa0879650 | 0.810172 | 1.315233e-50 | -8.615850e-47 |
| Msa0096020 | Msa0884840 | 0.801088 | 1.061806e-48 | -8.615850e-47 |
| Msa0096020 | Msa0887070 | 0.842059 | 3.257372e-58 | -8.615850e-47 |
| Msa0096020 | Msa0899730 | 0.837992 | 3.746179e-57 | -8.615850e-47 |
| Msa0096020 | Msa0913120 | 0.834839 | 2.376557e-56 | -8.615850e-47 |
| Msa0096020 | Msa0930950 | 0.839681 | 1.370375e-57 | -8.615850e-47 |
| Msa0096020 | Msa0946300 | 0.805355 | 1.389154e-49 | -8.615850e-47 |
| Msa0096020 | Msa0950410 | 0.885427 | 8.209073e-72 | -8.615850e-47 |
| Msa0096020 | Msa0950620 | 0.801623 | 8.251351e-49 | -8.615850e-47 |
| Msa0096020 | Msa0964650 | 0.821160 | 4.680317e-53 | -8.615850e-47 |
| Msa0096020 | Msa0968240 | 0.807119 | 5.905686e-50 | -8.615850e-47 |
| Msa0096020 | Msa0973890 | 0.810879 | 9.254425e-51 | -8.615850e-47 |
| Msa0096020 | Msa0982590 | 0.806121 | 9.591168e-50 | -8.615850e-47 |
| Msa0096020 | Msa0984840 | 0.801408 | 9.134300e-49 | -8.615850e-47 |
| Msa0096020 | Msa0986620 | 0.834921 | 2.265786e-56 | -8.615850e-47 |
| Msa0096020 | Msa0999480 | 0.823402 | 1.412092e-53 | -8.615850e-47 |
| Msa0096020 | Msa0999590 | 0.815611 | 8.459745e-52 | -8.615850e-47 |
| Msa0096020 | Msa1010470 | 0.820059 | 8.376480e-53 | -8.615850e-47 |
| Msa0096020 | Msa1016110 | 0.822446 | 2.358570e-53 | -8.615850e-47 |
| Msa0096020 | Msa1031530 | 0.809273 | 2.052699e-50 | -8.615850e-47 |
| Msa0096020 | Msa1036020 | -0.811109 | 8.249875e-51 | -8.615850e-47 |
| Msa0096020 | Msa1040730 | -0.807520 | 4.856250e-50 | -8.615850e-47 |
| Msa0096020 | Msa1043020 | 0.833262 | 5.898482e-56 | -8.615850e-47 |
| Msa0096020 | Msa1044330 | 0.805255 | 1.457970e-49 | -8.615850e-47 |
| Msa0096020 | Msa1046220 | -0.800841 | 1.192625e-48 | -8.615850e-47 |
| Msa0096020 | Msa1052030 | 0.829866 | 4.049141e-55 | -8.615850e-47 |
| Msa0096020 | Msa1053690 | 0.801314 | 9.547812e-49 | -8.615850e-47 |
| Msa0096020 | Msa1067910 | 0.823273 | 1.514014e-53 | -8.615850e-47 |
| Msa0096020 | Msa1071310 | 0.814672 | 1.367138e-51 | -8.615850e-47 |
| Msa0096020 | Msa1088740 | 0.814776 | 1.296959e-51 | -8.615850e-47 |
| Msa0096020 | Msa1096510 | 0.824990 | 5.982069e-54 | -8.615850e-47 |
| Msa0096020 | Msa1096520 | 0.826121 | 3.226759e-54 | -8.615850e-47 |
| Msa0096020 | Msa1096570 | 0.841444 | 4.733143e-58 | -8.615850e-47 |
| Msa0096020 | Msa1101300 | 0.810513 | 1.110669e-50 | -8.615850e-47 |
| Msa0096020 | Msa1102200 | 0.810136 | 1.339509e-50 | -8.615850e-47 |
| Msa0096020 | Msa1122720 | 0.802534 | 5.359720e-49 | -8.615850e-47 |
| Msa0096020 | Msa1138600 | 0.818180 | 2.242825e-52 | -8.615850e-47 |
| Msa0096020 | Msa1140480 | 0.806983 | 6.310143e-50 | -8.615850e-47 |
| Msa0096020 | Msa1150860 | -0.813013 | 3.172322e-51 | -8.615850e-47 |
| Msa0096020 | Msa1172360 | 0.808605 | 2.853027e-50 | -8.615850e-47 |
| Msa0096020 | Msa1187810 | 0.807657 | 4.542412e-50 | -8.615850e-47 |
| Msa0096020 | Msa1188820 | 0.811549 | 6.622074e-51 | -8.615850e-47 |
| Msa0096020 | Msa1190350 | 0.806218 | 9.150520e-50 | -8.615850e-47 |
| Msa0096020 | Msa1203840 | 0.803832 | 2.887619e-49 | -8.615850e-47 |
| Msa0096020 | Msa1203860 | 0.827874 | 1.229429e-54 | -8.615850e-47 |
| Msa0096020 | Msa1209790 | 0.838852 | 2.248190e-57 | -8.615850e-47 |
| Msa0096020 | Msa1209800 | 0.834908 | 2.283612e-56 | -8.615850e-47 |
| Msa0096020 | Msa1211260 | 0.815252 | 1.016846e-51 | -8.615850e-47 |
| Msa0096020 | Msa1211300 | 0.823295 | 1.495749e-53 | -8.615850e-47 |
| Msa0096020 | Msa1211390 | 0.832307 | 1.018445e-55 | -8.615850e-47 |
| Msa0096020 | Msa1219780 | -0.839069 | 1.974851e-57 | -8.615850e-47 |
| Msa0096020 | Msa1222030 | -0.800234 | 1.585921e-48 | -8.615850e-47 |
| Msa0096020 | Msa1237260 | 0.820347 | 7.196957e-53 | -8.615850e-47 |
| Msa0096020 | Msa1242990 | 0.863515 | 2.355929e-64 | -8.615850e-47 |
| Msa0096020 | Msa1243630 | 0.833289 | 5.809622e-56 | -8.615850e-47 |
| Msa0096020 | Msa1244220 | 0.833819 | 4.282999e-56 | -8.615850e-47 |
| Msa0096020 | Msa1248220 | 0.812596 | 3.914673e-51 | -8.615850e-47 |
| Msa0096020 | Msa1249410 | 0.818588 | 1.812090e-52 | -8.615850e-47 |
| Msa0096020 | Msa1258100 | 0.803831 | 2.889360e-49 | -8.615850e-47 |
| Msa0096020 | Msa1266710 | -0.845356 | 4.273396e-59 | -8.615850e-47 |
| Msa0096020 | Msa1272950 | 0.820178 | 7.866084e-53 | -8.615850e-47 |
| Msa0096020 | Msa1282210 | 0.821894 | 3.166554e-53 | -8.615850e-47 |
| Msa0096020 | Msa1284390 | 0.822406 | 2.409632e-53 | -8.615850e-47 |
| Msa0096020 | Msa1286950 | 0.808465 | 3.056440e-50 | -8.615850e-47 |
| Msa0096020 | Msa1288970 | 0.805810 | 1.115103e-49 | -8.615850e-47 |
| Msa0096020 | Msa1295220 | 0.804077 | 2.568581e-49 | -8.615850e-47 |
| Msa0096020 | Msa1306700 | 0.819484 | 1.133654e-52 | -8.615850e-47 |
| Msa0096020 | Msa1317240 | 0.800519 | 1.387693e-48 | -8.615850e-47 |
| Msa0096020 | Msa1317710 | 0.807465 | 4.988486e-50 | -8.615850e-47 |
| Msa0096020 | Msa1323920 | 0.823088 | 1.671880e-53 | -8.615850e-47 |
| Msa0096020 | Msa1330910 | 0.807116 | 5.915962e-50 | -8.615850e-47 |
| Msa0096020 | Msa1340880 | 0.808826 | 2.558881e-50 | -8.615850e-47 |
| Msa0096020 | Msa1342400 | 0.816865 | 4.437232e-52 | -8.615850e-47 |
| Msa0096020 | Msa1348330 | -0.850265 | 1.898984e-60 | -8.615850e-47 |
| Msa0096020 | Msa1349640 | 0.809944 | 1.472643e-50 | -8.615850e-47 |
| Msa0096020 | Msa1349810 | 0.811816 | 5.794383e-51 | -8.615850e-47 |
| Msa0096020 | Msa1349850 | 0.847810 | 9.133709e-60 | -8.615850e-47 |
| Msa0096020 | Msa1356730 | 0.836531 | 8.863399e-57 | -8.615850e-47 |
| Msa0096020 | Msa1363690 | -0.819036 | 1.434288e-52 | -8.615850e-47 |
| Msa0096020 | Msa1364850 | 0.821639 | 3.628905e-53 | -8.615850e-47 |
| Msa0096020 | Msa1368660 | 0.828419 | 9.083872e-55 | -8.615850e-47 |
| Msa0096020 | Msa1369180 | 0.806245 | 9.031822e-50 | -8.615850e-47 |
| Msa0096020 | Msa1370930 | -0.808741 | 2.668627e-50 | -8.615850e-47 |
| Msa0096020 | Msa1384620 | 0.829032 | 6.459473e-55 | -8.615850e-47 |
| Msa0096020 | Msa1384980 | 0.833742 | 4.476728e-56 | -8.615850e-47 |
| Msa0096020 | Msa1387520 | 0.806478 | 8.067585e-50 | -8.615850e-47 |
| Msa0096020 | Msa1388520 | 0.818844 | 1.585856e-52 | -8.615850e-47 |
| Msa0096020 | Msa1395580 | 0.825421 | 4.731804e-54 | -8.615850e-47 |
| Msa0096020 | Msa1396550 | -0.822854 | 1.895346e-53 | -8.615850e-47 |
| Msa0096020 | Msa1403950 | 0.979822 | 8.084868e-149 | -8.615850e-47 |
| Msa0096020 | Msa1407210 | -0.841816 | 3.777446e-58 | -8.615850e-47 |
| Msa0096020 | Msa1409060 | -0.813093 | 3.048082e-51 | -8.615850e-47 |
| Msa0096020 | Msa1413900 | 0.833716 | 4.545391e-56 | -8.615850e-47 |
| Msa0096020 | Msa1417950 | -0.801283 | 9.686898e-49 | -8.615850e-47 |
| Msa0096020 | Msa1431240 | 0.828540 | 8.495549e-55 | -8.615850e-47 |
| Msa0096020 | Msa1435690 | 0.834188 | 3.462634e-56 | -8.615850e-47 |
| Msa0096020 | Msa1443550 | 0.815554 | 8.709551e-52 | -8.615850e-47 |
| Msa0096020 | Msa1446220 | 0.810730 | 9.966865e-51 | -8.615850e-47 |
| Msa0096020 | Msa1451690 | 0.848570 | 5.633374e-60 | -8.615850e-47 |
| Msa0096020 | Msa1452200 | 0.850260 | 1.905173e-60 | -8.615850e-47 |
| Msa0096020 | Msa1459630 | 0.812775 | 3.577463e-51 | -8.615850e-47 |
| Msa0096020 | Msa1463500 | 0.800912 | 1.153794e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096020 | MtrunA17_Chr5g0398681 | 97.260 | 438 | 12 | 0 | 1 | 438 | 37 | 474 | 0.0 | 900 |
| Msa0096020 | MtrunA17_Chr5g0398691 | 97.959 | 49 | 1 | 0 | 451 | 499 | 1 | 49 | 2.23e-26 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096020 | AT1G12370.2 | 73.805 | 481 | 118 | 4 | 13 | 486 | 6 | 485 | 0.0 | 760 |
| Msa0096020 | AT1G12370.1 | 72.557 | 481 | 118 | 5 | 13 | 486 | 6 | 479 | 0.0 | 740 |
| Msa0096020 | AT1G12370.3 | 68.191 | 481 | 115 | 5 | 13 | 486 | 6 | 455 | 0.0 | 685 |
Find 136 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCTTCACTTCTCTTAA+AGG | 0.077903 | 1_3:-1451459 | None:intergenic |
| CTCACAATGTTGTGCCTCTT+TGG | 0.134190 | 1_3:+1451538 | Msa0096020:CDS |
| TTATCTCCCTATTTGCATTT+TGG | 0.174359 | 1_3:+1452090 | Msa0096020:CDS |
| TGTAAACCAACTGCACTTTC+TGG | 0.198914 | 1_3:+1452066 | Msa0096020:CDS |
| AAAATGGATTCTTGACTAAA+AGG | 0.235044 | 1_3:+1452010 | Msa0096020:CDS |
| ATCAACGGTTGAAAGATAAT+TGG | 0.241349 | 1_3:+1450730 | Msa0096020:CDS |
| GGTGCAAAGGCGCGTCATTT+AGG | 0.258100 | 1_3:+1450834 | Msa0096020:CDS |
| ATATACCCGAACTAAGAAAA+AGG | 0.271526 | 1_3:-1450916 | None:intergenic |
| TATCTGTCCAAAATGCAAAT+AGG | 0.281173 | 1_3:-1452097 | None:intergenic |
| GTGCAAAGGCGCGTCATTTA+GGG | 0.286664 | 1_3:+1450835 | Msa0096020:CDS |
| TCATTTAGGGTTTATGCTTA+AGG | 0.317150 | 1_3:+1450848 | Msa0096020:CDS |
| AAAGGCTGTTGATACTTTCT+TGG | 0.322975 | 1_3:+1452277 | Msa0096020:intron |
| AGTATAGTGCTAGAACAATA+AGG | 0.328544 | 1_3:+1451580 | Msa0096020:CDS |
| TTTCTTGTACAGAATGTATT+GGG | 0.328825 | 1_3:+1452901 | Msa0096020:intron |
| TCACAATGTTGTGCCTCTTT+GGG | 0.330219 | 1_3:+1451539 | Msa0096020:CDS |
| TTGTGAGAGGGTTAGTGATT+TGG | 0.348183 | 1_3:+1451494 | Msa0096020:CDS |
| ATGATATTTGAAGTAGGAAT+AGG | 0.350851 | 1_3:+1453763 | Msa0096020:three_prime_UTR |
| GGGTTCACCGACGGCGAAAT+TGG | 0.356744 | 1_3:-1450639 | None:intergenic |
| CCTGGTAATTTGCCATTGTT+TGG | 0.366651 | 1_3:+1453852 | Msa0096020:three_prime_UTR |
| CATTTAGGGTTTATGCTTAA+GGG | 0.367715 | 1_3:+1450849 | Msa0096020:CDS |
| CAATTGGAGATGGTTCACTA+TGG | 0.369299 | 1_3:+1452682 | Msa0096020:CDS |
| ATCTGTCCAAAATGCAAATA+GGG | 0.371421 | 1_3:-1452096 | None:intergenic |
| GCTTTGGAATGCTTCTCAAT+TGG | 0.384572 | 1_3:+1452666 | Msa0096020:intron |
| GCAGTTGGTGGTTCGACATC+AGG | 0.385393 | 1_3:-1451645 | None:intergenic |
| AGAATGTGGAGCTTCACTTT+TGG | 0.385826 | 1_3:+1451422 | Msa0096020:CDS |
| TTGGGTTGCTTCTGAGAAGT+TGG | 0.386676 | 1_3:+1451557 | Msa0096020:CDS |
| CGAACCACCAACTGCGAAAT+GGG | 0.396211 | 1_3:+1451653 | Msa0096020:CDS |
| CGGACCTTGAAAGAAGGTTC+TGG | 0.405636 | 1_3:+1450672 | Msa0096020:CDS |
| CCTGGTAATTTGCCATTGTC+TGG | 0.410925 | 1_3:+1453737 | Msa0096020:three_prime_UTR |
| ATGATACTTGAAGTAGGAAT+AGG | 0.414164 | 1_3:+1453878 | Msa0096020:three_prime_UTR |
| CGGTGAACCCTGGTCGCATT+CGG | 0.415152 | 1_3:+1450652 | Msa0096020:CDS |
| AAACGGGTCCCGTCGTGTAC+TGG | 0.419132 | 1_3:+1450697 | Msa0096020:CDS |
| GGCTCACACCAATCCACTTC+AGG | 0.422837 | 1_3:-1451949 | None:intergenic |
| CATATCTCAAGTGCTTCTTC+AGG | 0.423566 | 1_3:-1452953 | None:intergenic |
| ATATCATTGCTCAAGTGTTA+AGG | 0.423610 | 1_3:+1451709 | Msa0096020:CDS |
| GGAAAATTTGCTATCTGAAA+AGG | 0.425354 | 1_3:+1453631 | Msa0096020:CDS |
| GTATAGTGCTAGAACAATAA+GGG | 0.425923 | 1_3:+1451581 | Msa0096020:CDS |
| AGGGATCCAAGTGGTTATAA+TGG | 0.426452 | 1_3:+1453118 | Msa0096020:CDS |
| TCCATTGCAGCAATTTCTCC+AGG | 0.429563 | 1_3:-1451970 | None:intergenic |
| TCGAACCACCAACTGCGAAA+TGG | 0.431415 | 1_3:+1451652 | Msa0096020:CDS |
| AACAACGGCAACAGGAACTT+TGG | 0.432053 | 1_3:-1450787 | None:intergenic |
| GAAAGTGCAGTTGGTTTACA+AGG | 0.434713 | 1_3:-1452063 | None:intergenic |
| GGCGAAATTGGCGGCGGCGA+CGG | 0.439771 | 1_3:-1450627 | None:intergenic |
| TTCTTACAGAAGGGAGCAGT+TGG | 0.440949 | 1_3:+1452504 | Msa0096020:intron |
| TGCTGCAATGGAAGTGTTGA+TGG | 0.442384 | 1_3:+1451981 | Msa0096020:CDS |
| TCTTGGAGGAGTTGATTGTT+CGG | 0.444155 | 1_3:+1452294 | Msa0096020:CDS |
| GTTGCACACCTTGCAGTTCA+AGG | 0.450618 | 1_3:+1453929 | Msa0096020:three_prime_UTR |
| GGCTGTTGATACTTTCTTGG+AGG | 0.457372 | 1_3:+1452280 | Msa0096020:intron |
| ATCAGAGGCGTGGTCGAGTA+AGG | 0.459791 | 1_3:-1452396 | None:intergenic |
| TCAACGGTTGAAAGATAATT+GGG | 0.460189 | 1_3:+1450731 | Msa0096020:CDS |
| ATAAAATAGTTGGTGAGCTC+AGG | 0.462164 | 1_3:+1453597 | Msa0096020:CDS |
| TATATGTGGGGTACATGATC+AGG | 0.462446 | 1_3:+1453153 | Msa0096020:CDS |
| GAAGTAGGAATAGGTTTATG+TGG | 0.462493 | 1_3:+1453772 | Msa0096020:three_prime_UTR |
| GAATAGGTTTATGTGGATTG+TGG | 0.462929 | 1_3:+1453779 | Msa0096020:three_prime_UTR |
| ATTCGATACATGAATTATGA+AGG | 0.471243 | 1_3:+1453530 | Msa0096020:CDS |
| CACCTGACTGCAGTATGAAA+TGG | 0.471472 | 1_3:+1453090 | Msa0096020:intron |
| CTGAGGACCATGTCATAGAC+TGG | 0.473064 | 1_3:+1451682 | Msa0096020:CDS |
| CCTCATTACGATTCATTACA+AGG | 0.477130 | 1_3:+1452350 | Msa0096020:CDS |
| ATGTATATATTTAAATGATA+AGG | 0.477258 | 1_3:+1452973 | Msa0096020:CDS |
| CGCATTCGGACCTTGAAAGA+AGG | 0.484903 | 1_3:+1450666 | Msa0096020:CDS |
| GAAGTGGATTGGTGTGAGCC+TGG | 0.486895 | 1_3:+1451952 | Msa0096020:CDS |
| TTTGTTTAGGTATAGTAGCC+TGG | 0.489309 | 1_3:+1453834 | Msa0096020:three_prime_UTR |
| GCATATGTAAATAAAATAGT+TGG | 0.491237 | 1_3:+1453587 | Msa0096020:CDS |
| TTCAAGGTCCGAATGCGACC+AGG | 0.496662 | 1_3:-1450660 | None:intergenic |
| GTACATGTTCTTCAATCCTC+AGG | 0.499954 | 1_3:-1453677 | None:intergenic |
| ATGACCCATTTCGCAGTTGG+TGG | 0.500881 | 1_3:-1451657 | None:intergenic |
| TTTGTTTAGGCATAATAGCC+TGG | 0.502839 | 1_3:+1453719 | Msa0096020:three_prime_UTR |
| GGCTGCATGTGGTCTATATG+TGG | 0.503441 | 1_3:+1453139 | Msa0096020:CDS |
| TCGAAGTTTGTTAGAGAATG+TGG | 0.506846 | 1_3:+1451408 | Msa0096020:CDS |
| CCAGACAATGGCAAATTACC+AGG | 0.508214 | 1_3:-1453737 | None:intergenic |
| CCAAACAATGGCAAATTACC+AGG | 0.508214 | 1_3:-1453852 | None:intergenic |
| GCTACGAGCTTCATATCCTC+AGG | 0.510731 | 1_3:+1452152 | Msa0096020:CDS |
| GAATGCTTCTCAATTGGAGA+TGG | 0.517008 | 1_3:+1452672 | Msa0096020:CDS |
| CTGAGGTTCCTGAAGTGGAT+TGG | 0.525623 | 1_3:+1451941 | Msa0096020:CDS |
| GTGATGACCCATTTCGCAGT+TGG | 0.526232 | 1_3:-1451660 | None:intergenic |
| CATTACAAGGAGCATGGGAG+TGG | 0.527272 | 1_3:+1452363 | Msa0096020:CDS |
| ACGATTCATTACAAGGAGCA+TGG | 0.534155 | 1_3:+1452357 | Msa0096020:CDS |
| GACGGTGTGGTAGCCATGAT+CGG | 0.534775 | 1_3:-1450609 | None:intergenic |
| CGATTCATTACAAGGAGCAT+GGG | 0.538381 | 1_3:+1452358 | Msa0096020:CDS |
| GCCGCCGCCAATTTCGCCGT+CGG | 0.538485 | 1_3:+1450632 | Msa0096020:CDS |
| GCCTGGAGAAATTGCTGCAA+TGG | 0.546282 | 1_3:+1451969 | Msa0096020:CDS |
| GCTGAAGTTGGTGACACAAT+TGG | 0.547069 | 1_3:-1450878 | None:intergenic |
| TGGAGCTGAGGTTCCTGAAG+TGG | 0.548511 | 1_3:+1451936 | Msa0096020:CDS |
| CAGAAGGGAGCAGTTGGAGA+AGG | 0.554367 | 1_3:+1452510 | Msa0096020:intron |
| TATATTATAGGGTGAGGCGG+AGG | 0.555525 | 1_3:+1451377 | Msa0096020:intron |
| ACAAGGGTTATTGCGATCTG+TGG | 0.555752 | 1_3:-1452046 | None:intergenic |
| CTAAATTAGGAGTGGAGCTG+AGG | 0.557965 | 1_3:+1451924 | Msa0096020:intron |
| AATTGGAGATGGTTCACTAT+GGG | 0.559765 | 1_3:+1452683 | Msa0096020:CDS |
| CAAATCTGAGATTTGTGAGA+GGG | 0.564185 | 1_3:+1451482 | Msa0096020:CDS |
| TTCACCGACGGCGAAATTGG+CGG | 0.565213 | 1_3:-1450636 | None:intergenic |
| TGAGACCAACTCTTTCGAGT+TGG | 0.565413 | 1_3:-1453973 | None:intergenic |
| GCAAATCTGAGATTTGTGAG+AGG | 0.567196 | 1_3:+1451481 | Msa0096020:CDS |
| TATGAAGAGAATGCTGAAGT+TGG | 0.570021 | 1_3:-1450890 | None:intergenic |
| TTCTCAGAAGCAACCCAAAG+AGG | 0.571605 | 1_3:-1451552 | None:intergenic |
| ATTTCGCCGTCGGTGAACCC+TGG | 0.573219 | 1_3:+1450642 | Msa0096020:CDS |
| CTGAACATCCAGTACACGAC+GGG | 0.574855 | 1_3:-1450705 | None:intergenic |
| AATTGGCGGCGGCGACGGTG+TGG | 0.579274 | 1_3:-1450622 | None:intergenic |
| GATAAACCAGAAAGTGCAGT+TGG | 0.580556 | 1_3:-1452072 | None:intergenic |
| GGGCAAAGAAGATACTTGAA+TGG | 0.580989 | 1_3:+1452921 | Msa0096020:CDS |
| TTCGATACATGAATTATGAA+GGG | 0.582152 | 1_3:+1453531 | Msa0096020:CDS |
| AAGATACTTGAATGGACAAG+AGG | 0.585996 | 1_3:+1452929 | Msa0096020:CDS |
| TGGCTGATGATACTTGAAGT+AGG | 0.588149 | 1_3:+1453872 | Msa0096020:three_prime_UTR |
| GCAGTATGAAATGGATGGGA+GGG | 0.599361 | 1_3:+1453099 | Msa0096020:intron |
| ACCGACGGCGAAATTGGCGG+CGG | 0.601194 | 1_3:-1450633 | None:intergenic |
| TCAAGGTCCGAATGCGACCA+GGG | 0.604948 | 1_3:-1450659 | None:intergenic |
| CCTTGTAATGAATCGTAATG+AGG | 0.611817 | 1_3:-1452350 | None:intergenic |
| GACTGCAGTATGAAATGGAT+GGG | 0.612359 | 1_3:+1453095 | Msa0096020:intron |
| AAATATCATCAGCCAGACAA+TGG | 0.615090 | 1_3:-1453749 | None:intergenic |
| GTTCACTATGGGAAAATGCA+CGG | 0.616114 | 1_3:+1452694 | Msa0096020:CDS |
| TATAGTGCTAGAACAATAAG+GGG | 0.617876 | 1_3:+1451582 | Msa0096020:CDS |
| ATGCAGCCATTATAACCACT+TGG | 0.618817 | 1_3:-1453124 | None:intergenic |
| GTACTCCAACTCGAAAGAGT+TGG | 0.619582 | 1_3:+1453968 | Msa0096020:three_prime_UTR |
| GCTGCATGTGGTCTATATGT+GGG | 0.622527 | 1_3:+1453140 | Msa0096020:CDS |
| ATTACAAGGAGCATGGGAGT+GGG | 0.625049 | 1_3:+1452364 | Msa0096020:CDS |
| AAGTATCATCAGCCAAACAA+TGG | 0.628100 | 1_3:-1453864 | None:intergenic |
| AGTTTCGTCCTTGAACTGCA+AGG | 0.628868 | 1_3:-1453937 | None:intergenic |
| CTGCATGTGGTCTATATGTG+GGG | 0.631180 | 1_3:+1453141 | Msa0096020:CDS |
| AACATGTGGTCGCTTATCAG+AGG | 0.633768 | 1_3:-1452411 | None:intergenic |
| ATGCGACCAGGGTTCACCGA+CGG | 0.638577 | 1_3:-1450648 | None:intergenic |
| TGGCTGATGATATTTGAAGT+AGG | 0.638889 | 1_3:+1453757 | Msa0096020:three_prime_UTR |
| AAAGTGCAGTTGGTTTACAA+GGG | 0.645680 | 1_3:-1452062 | None:intergenic |
| GCTGCAATGGAAGTGTTGAT+GGG | 0.650703 | 1_3:+1451982 | Msa0096020:CDS |
| TGCAGTATGAAATGGATGGG+AGG | 0.651233 | 1_3:+1453098 | Msa0096020:intron |
| TGAGGACCATGTCATAGACT+GGG | 0.652891 | 1_3:+1451683 | Msa0096020:CDS |
| TGACTGCAGTATGAAATGGA+TGG | 0.661718 | 1_3:+1453094 | Msa0096020:intron |
| ACTCCGCTGTTGTAATCCTG+AGG | 0.667646 | 1_3:+1453661 | Msa0096020:CDS |
| TATCATCCCAGTCTATGACA+TGG | 0.679585 | 1_3:-1451689 | None:intergenic |
| GTGGTCGCTTATCAGAGGCG+TGG | 0.687884 | 1_3:-1452406 | None:intergenic |
| GTGGTTATAATGGCTGCATG+TGG | 0.695870 | 1_3:+1453128 | Msa0096020:CDS |
| AATCCTCAGGATTACAACAG+CGG | 0.707260 | 1_3:-1453664 | None:intergenic |
| ACTGGATGTTCAGAGATCAA+CGG | 0.717235 | 1_3:+1450715 | Msa0096020:CDS |
| TCTGAACATCCAGTACACGA+CGG | 0.720409 | 1_3:-1450706 | None:intergenic |
| TGCGAAATGGGTCATCACTG+AGG | 0.720581 | 1_3:+1451665 | Msa0096020:CDS |
| TGAGCTCAGGAAGAGAAAAG+CGG | 0.732170 | 1_3:+1453610 | Msa0096020:CDS |
| GTGACTCACGTGTAAACATG+TGG | 0.733331 | 1_3:-1452425 | None:intergenic |
| ATGGATGGGAGGGATCCAAG+TGG | 0.761782 | 1_3:+1453109 | Msa0096020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTATATTAT+AGG | + | chr1_3:1451365-1451384 | Msa0096020:intron | 0.0% |
| !!! | TTTTTTTTTTTTATATTATA+GGG | + | chr1_3:1451366-1451385 | Msa0096020:intron | 0.0% |
| !! | AAAATTCAAATTTCAATTAT+AGG | + | chr1_3:1450963-1450982 | Msa0096020:intron | 10.0% |
| !! | ATGTATATATTTAAATGATA+AGG | + | chr1_3:1452973-1452992 | Msa0096020:CDS | 10.0% |
| !!! | ATTTTTTTCTTTCCTAAATT+AGG | + | chr1_3:1451911-1451930 | Msa0096020:intron | 15.0% |
| !! | TTAGGAAAAACAAAATAAAA+CGG | - | chr1_3:1452201-1452220 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTATTCTTACAGA+AGG | + | chr1_3:1452494-1452513 | Msa0096020:intron | 15.0% |
| !!! | TTTTTTTTATTCTTACAGAA+GGG | + | chr1_3:1452495-1452514 | Msa0096020:intron | 15.0% |
| !! | ATCAAACAGATTAAAAACAA+CGG | - | chr1_3:1450805-1450824 | None:intergenic | 20.0% |
| !!! | TTATATTTGCGTATTTGTTA+TGG | + | chr1_3:1451270-1451289 | Msa0096020:intron | 20.0% |
| !!! | TATATTTGCGTATTTGTTAT+GGG | + | chr1_3:1451271-1451290 | Msa0096020:intron | 20.0% |
| !!! | TTTTTTTATATTATAGGGTG+AGG | + | chr1_3:1451371-1451390 | Msa0096020:intron | 20.0% |
| !! | TAAGAAATATTAGTGATTGA+AGG | - | chr1_3:1451798-1451817 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTCCTAAGAAAA+CGG | + | chr1_3:1452206-1452225 | Msa0096020:intron | 20.0% |
| !! | TTTCTCATATTAAAACTACA+TGG | + | chr1_3:1452579-1452598 | Msa0096020:intron | 20.0% |
| !!! | AAATGAAAGGCATTAATATA+GGG | - | chr1_3:1452628-1452647 | None:intergenic | 20.0% |
| !!! | AAAATGAAAGGCATTAATAT+AGG | - | chr1_3:1452629-1452648 | None:intergenic | 20.0% |
| !!! | TTAATGCCTTTCATTTTTTT+TGG | + | chr1_3:1452632-1452651 | Msa0096020:intron | 20.0% |
| !!! | TAATGCCTTTCATTTTTTTT+GGG | + | chr1_3:1452633-1452652 | Msa0096020:intron | 20.0% |
| !! | GTATAAAAAAATGAATGTTG+AGG | + | chr1_3:1453247-1453266 | Msa0096020:intron | 20.0% |
| !! | ACCTAATGAATTGTAAAATT+TGG | + | chr1_3:1453380-1453399 | Msa0096020:intron | 20.0% |
| !!! | ACCAAATTTTACAATTCATT+AGG | - | chr1_3:1453384-1453403 | None:intergenic | 20.0% |
| !! | GCATATGTAAATAAAATAGT+TGG | + | chr1_3:1453587-1453606 | Msa0096020:CDS | 20.0% |
| !! | AATCTGTTTGATCATTTTCT+TGG | + | chr1_3:1450813-1450832 | Msa0096020:CDS | 25.0% |
| !! | ATATACCCTTTTTCTTAGTT+CGG | + | chr1_3:1450910-1450929 | Msa0096020:CDS | 25.0% |
| !!! | ATATTTGCGTATTTGTTATG+GGG | + | chr1_3:1451272-1451291 | Msa0096020:intron | 25.0% |
| !! | AAAATGGATTCTTGACTAAA+AGG | + | chr1_3:1452010-1452029 | Msa0096020:CDS | 25.0% |
| !!! | TATTTTGTTTTCTAGCTCTA+AGG | + | chr1_3:1452450-1452469 | Msa0096020:intron | 25.0% |
| !!! | AATGAAAGGCATTAATATAG+GGG | - | chr1_3:1452627-1452646 | None:intergenic | 25.0% |
| !!! | AATGCCTTTCATTTTTTTTG+GGG | + | chr1_3:1452634-1452653 | Msa0096020:intron | 25.0% |
| ! | TAATAAACTTACGATTGGAA+TGG | - | chr1_3:1452767-1452786 | None:intergenic | 25.0% |
| ! | ATTCATCAAAACAGTTTACT+TGG | + | chr1_3:1452816-1452835 | Msa0096020:intron | 25.0% |
| ! | CATATAATCTCTTTCTCTAT+TGG | + | chr1_3:1452843-1452862 | Msa0096020:intron | 25.0% |
| !! | TTTTCTTGTACAGAATGTAT+TGG | + | chr1_3:1452900-1452919 | Msa0096020:intron | 25.0% |
| ! | TTTCTTGTACAGAATGTATT+GGG | + | chr1_3:1452901-1452920 | Msa0096020:intron | 25.0% |
| !!! | ACAGTTTAATTTGAATGTTG+AGG | + | chr1_3:1453203-1453222 | Msa0096020:intron | 25.0% |
| !!! | CATTTTTTTATACATCCAAC+AGG | - | chr1_3:1453240-1453259 | None:intergenic | 25.0% |
| !! | TAGGTTCTAATGAAATTAGA+AGG | - | chr1_3:1453365-1453384 | None:intergenic | 25.0% |
| !! | TTTGTGTTTCTATTCATTTC+AGG | + | chr1_3:1453478-1453497 | Msa0096020:intron | 25.0% |
| !! | TTGTGTTTCTATTCATTTCA+GGG | + | chr1_3:1453479-1453498 | Msa0096020:intron | 25.0% |
| !! | TATCGAATTTTCCCAAAAAT+GGG | - | chr1_3:1453518-1453537 | None:intergenic | 25.0% |
| ! | ATTCGATACATGAATTATGA+AGG | + | chr1_3:1453530-1453549 | Msa0096020:CDS | 25.0% |
| ! | TTCGATACATGAATTATGAA+GGG | + | chr1_3:1453531-1453550 | Msa0096020:CDS | 25.0% |
| !!! | TCTAGACATCTTTTTTGTTT+AGG | + | chr1_3:1453706-1453725 | Msa0096020:three_prime_UTR | 25.0% |
| !! | ATGATATTTGAAGTAGGAAT+AGG | + | chr1_3:1453763-1453782 | Msa0096020:three_prime_UTR | 25.0% |
| !!! | TGCACTAATCTTTTTTGTTT+AGG | + | chr1_3:1453821-1453840 | Msa0096020:three_prime_UTR | 25.0% |
| ATCAACGGTTGAAAGATAAT+TGG | + | chr1_3:1450730-1450749 | Msa0096020:CDS | 30.0% | |
| TCAACGGTTGAAAGATAATT+GGG | + | chr1_3:1450731-1450750 | Msa0096020:CDS | 30.0% | |
| ! | TCATTTAGGGTTTATGCTTA+AGG | + | chr1_3:1450848-1450867 | Msa0096020:CDS | 30.0% |
| ! | CATTTAGGGTTTATGCTTAA+GGG | + | chr1_3:1450849-1450868 | Msa0096020:CDS | 30.0% |
| ! | TATACCCTTTTTCTTAGTTC+GGG | + | chr1_3:1450911-1450930 | Msa0096020:CDS | 30.0% |
| TATACCCGAACTAAGAAAAA+GGG | - | chr1_3:1450918-1450937 | None:intergenic | 30.0% | |
| ATATACCCGAACTAAGAAAA+AGG | - | chr1_3:1450919-1450938 | None:intergenic | 30.0% | |
| AAATGTCGATATTGTTATGC+TGG | + | chr1_3:1451060-1451079 | Msa0096020:intron | 30.0% | |
| !! | TATTTGCGTATTTGTTATGG+GGG | + | chr1_3:1451273-1451292 | Msa0096020:intron | 30.0% |
| ! | TTTTATATTATAGGGTGAGG+CGG | + | chr1_3:1451374-1451393 | Msa0096020:intron | 30.0% |
| CATTTCTTCACTTCTCTTAA+AGG | - | chr1_3:1451462-1451481 | None:intergenic | 30.0% | |
| AGTATAGTGCTAGAACAATA+AGG | + | chr1_3:1451580-1451599 | Msa0096020:CDS | 30.0% | |
| GTATAGTGCTAGAACAATAA+GGG | + | chr1_3:1451581-1451600 | Msa0096020:CDS | 30.0% | |
| TATAGTGCTAGAACAATAAG+GGG | + | chr1_3:1451582-1451601 | Msa0096020:CDS | 30.0% | |
| ATATCATTGCTCAAGTGTTA+AGG | + | chr1_3:1451709-1451728 | Msa0096020:CDS | 30.0% | |
| TTTCTTTCCTAAATTAGGAG+TGG | + | chr1_3:1451916-1451935 | Msa0096020:intron | 30.0% | |
| ! | TTATCTCCCTATTTGCATTT+TGG | + | chr1_3:1452090-1452109 | Msa0096020:CDS | 30.0% |
| ATCTGTCCAAAATGCAAATA+GGG | - | chr1_3:1452099-1452118 | None:intergenic | 30.0% | |
| TATCTGTCCAAAATGCAAAT+AGG | - | chr1_3:1452100-1452119 | None:intergenic | 30.0% | |
| ! | CTTTTTCTGTTCTTCAATGT+TGG | + | chr1_3:1452251-1452270 | Msa0096020:intron | 30.0% |
| TTTGCCCCAAAAAAAATGAA+AGG | - | chr1_3:1452641-1452660 | None:intergenic | 30.0% | |
| !!! | AGTTATTGCCTCCTTTTTTT+TGG | + | chr1_3:1452741-1452760 | Msa0096020:intron | 30.0% |
| CGATGTAATAAACTTACGAT+TGG | - | chr1_3:1452772-1452791 | None:intergenic | 30.0% | |
| ! | TTCTCTACAATGTTGACTAA+TGG | - | chr1_3:1453009-1453028 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGTGAAGTGCTTT+TGG | + | chr1_3:1453285-1453304 | Msa0096020:intron | 30.0% |
| CAAATCAGTTCCACATAAAA+TGG | - | chr1_3:1453336-1453355 | None:intergenic | 30.0% | |
| !! | ATTGTAAAATTTGGTGTTGC+AGG | + | chr1_3:1453389-1453408 | Msa0096020:intron | 30.0% |
| ! | CTTCAAGATTTCTGAGTTTT+TGG | + | chr1_3:1453453-1453472 | Msa0096020:intron | 30.0% |
| ! | TGTGTTTCTATTCATTTCAG+GGG | + | chr1_3:1453480-1453499 | Msa0096020:intron | 30.0% |
| ! | GTATCGAATTTTCCCAAAAA+TGG | - | chr1_3:1453519-1453538 | None:intergenic | 30.0% |
| !! | GGAAAATTTGCTATCTGAAA+AGG | + | chr1_3:1453631-1453650 | Msa0096020:CDS | 30.0% |
| ATGATACTTGAAGTAGGAAT+AGG | + | chr1_3:1453878-1453897 | Msa0096020:three_prime_UTR | 30.0% | |
| GTCTCATTGACATTAAAAAG+AGG | + | chr1_3:1453990-1454009 | Msa0096020:three_prime_UTR | 30.0% | |
| ! | TTTTCCAGAACCTTCTTTCA+AGG | - | chr1_3:1450679-1450698 | None:intergenic | 35.0% |
| !! | GAAAGAAGGTTCTGGAAAAA+CGG | + | chr1_3:1450680-1450699 | Msa0096020:CDS | 35.0% |
| !! | AAAGAAGGTTCTGGAAAAAC+GGG | + | chr1_3:1450681-1450700 | Msa0096020:CDS | 35.0% |
| AGATTAAAAACAACGGCAAC+AGG | - | chr1_3:1450798-1450817 | None:intergenic | 35.0% | |
| !! | TGATCATTTTCTTGGTGCAA+AGG | + | chr1_3:1450821-1450840 | Msa0096020:CDS | 35.0% |
| TATGAAGAGAATGCTGAAGT+TGG | - | chr1_3:1450893-1450912 | None:intergenic | 35.0% | |
| AGAGTAAATGAGAGACAAAG+TGG | - | chr1_3:1451131-1451150 | None:intergenic | 35.0% | |
| TTTGACAGTAAGTCATAACC+AGG | - | chr1_3:1451193-1451212 | None:intergenic | 35.0% | |
| CCTGACATCATTCATAACTA+GGG | + | chr1_3:1451247-1451266 | Msa0096020:intron | 35.0% | |
| !! | TCGAAGTTTGTTAGAGAATG+TGG | + | chr1_3:1451408-1451427 | Msa0096020:CDS | 35.0% |
| ! | CAAATCTGAGATTTGTGAGA+GGG | + | chr1_3:1451482-1451501 | Msa0096020:CDS | 35.0% |
| ! | GTGTTGATGGGAAGTAAAAA+TGG | + | chr1_3:1451994-1452013 | Msa0096020:CDS | 35.0% |
| ! | AAAGTGCAGTTGGTTTACAA+GGG | - | chr1_3:1452065-1452084 | None:intergenic | 35.0% |
| AGCATAGTAAAACAAACCTG+AGG | - | chr1_3:1452171-1452190 | None:intergenic | 35.0% | |
| ! | TAAGATCTCACCGTTTTCTT+AGG | - | chr1_3:1452219-1452238 | None:intergenic | 35.0% |
| AAAACGGTGAGATCTTATCT+TGG | + | chr1_3:1452222-1452241 | Msa0096020:intron | 35.0% | |
| GTTCTTCAATGTTGGTGTAA+AGG | + | chr1_3:1452259-1452278 | Msa0096020:intron | 35.0% | |
| AAAGGCTGTTGATACTTTCT+TGG | + | chr1_3:1452277-1452296 | Msa0096020:intron | 35.0% | |
| CCTTGTAATGAATCGTAATG+AGG | - | chr1_3:1452353-1452372 | None:intergenic | 35.0% | |
| CCTCATTACGATTCATTACA+AGG | + | chr1_3:1452350-1452369 | Msa0096020:CDS | 35.0% | |
| TCCTGTAAGCTAATCTTTCA+TGG | + | chr1_3:1452546-1452565 | Msa0096020:intron | 35.0% | |
| !! | TCCATGAAAGATTAGCTTAC+AGG | - | chr1_3:1452550-1452569 | None:intergenic | 35.0% |
| AATTGGAGATGGTTCACTAT+GGG | + | chr1_3:1452683-1452702 | Msa0096020:CDS | 35.0% | |
| GATTGGAATGGCCAAAAAAA+AGG | - | chr1_3:1452755-1452774 | None:intergenic | 35.0% | |
| AAGATACTTGAATGGACAAG+AGG | + | chr1_3:1452929-1452948 | Msa0096020:CDS | 35.0% | |
| ! | TGTGGTAGTTCCATTTTATG+TGG | + | chr1_3:1453323-1453342 | Msa0096020:intron | 35.0% |
| !! | ATAAAATAGTTGGTGAGCTC+AGG | + | chr1_3:1453597-1453616 | Msa0096020:CDS | 35.0% |
| TTTGTTTAGGCATAATAGCC+TGG | + | chr1_3:1453719-1453738 | Msa0096020:three_prime_UTR | 35.0% | |
| AAATATCATCAGCCAGACAA+TGG | - | chr1_3:1453752-1453771 | None:intergenic | 35.0% | |
| ! | TGGCTGATGATATTTGAAGT+AGG | + | chr1_3:1453757-1453776 | Msa0096020:three_prime_UTR | 35.0% |
| GAAGTAGGAATAGGTTTATG+TGG | + | chr1_3:1453772-1453791 | Msa0096020:three_prime_UTR | 35.0% | |
| ! | GAATAGGTTTATGTGGATTG+TGG | + | chr1_3:1453779-1453798 | Msa0096020:three_prime_UTR | 35.0% |
| TTTGTTTAGGTATAGTAGCC+TGG | + | chr1_3:1453834-1453853 | Msa0096020:three_prime_UTR | 35.0% | |
| AAGTATCATCAGCCAAACAA+TGG | - | chr1_3:1453867-1453886 | None:intergenic | 35.0% | |
| GCAACAAAAATCTCCGATCA+TGG | + | chr1_3:1450596-1450615 | Msa0096020:exon | 40.0% | |
| ACTGGATGTTCAGAGATCAA+CGG | + | chr1_3:1450715-1450734 | Msa0096020:CDS | 40.0% | |
| ATATTGTTATGCTGGATGCG+AGG | + | chr1_3:1451068-1451087 | Msa0096020:intron | 40.0% | |
| TATTGTTATGCTGGATGCGA+GGG | + | chr1_3:1451069-1451088 | Msa0096020:intron | 40.0% | |
| CATCTTAAAGTCACACTCAG+TGG | - | chr1_3:1451101-1451120 | None:intergenic | 40.0% | |
| AAACATGACATAGAGTGACC+TGG | + | chr1_3:1451172-1451191 | Msa0096020:intron | 40.0% | |
| ATGAATGATGTCAGGCAACT+TGG | - | chr1_3:1451242-1451261 | None:intergenic | 40.0% | |
| GCCTGACATCATTCATAACT+AGG | + | chr1_3:1451246-1451265 | Msa0096020:intron | 40.0% | |
| CCCTAGTTATGAATGATGTC+AGG | - | chr1_3:1451250-1451269 | None:intergenic | 40.0% | |
| ATTAGCCCTGTGAAATTGTC+CGG | - | chr1_3:1451311-1451330 | None:intergenic | 40.0% | |
| GACAATTTCACAGGGCTAAT+TGG | + | chr1_3:1451311-1451330 | Msa0096020:intron | 40.0% | |
| ! | AGAATGTGGAGCTTCACTTT+TGG | + | chr1_3:1451422-1451441 | Msa0096020:CDS | 40.0% |
| ! | GCAAATCTGAGATTTGTGAG+AGG | + | chr1_3:1451481-1451500 | Msa0096020:CDS | 40.0% |
| ! | TTGTGAGAGGGTTAGTGATT+TGG | + | chr1_3:1451494-1451513 | Msa0096020:CDS | 40.0% |
| TCACAATGTTGTGCCTCTTT+GGG | + | chr1_3:1451539-1451558 | Msa0096020:CDS | 40.0% | |
| TATCATCCCAGTCTATGACA+TGG | - | chr1_3:1451692-1451711 | None:intergenic | 40.0% | |
| !! | TTATGTAGCACCGACAGATA+TGG | + | chr1_3:1451769-1451788 | Msa0096020:intron | 40.0% |
| TTGAAGGCAACCATATCTGT+CGG | - | chr1_3:1451782-1451801 | None:intergenic | 40.0% | |
| ACTGACACTGACATTAGACA+CGG | - | chr1_3:1451847-1451866 | None:intergenic | 40.0% | |
| ! | GAAAGTGCAGTTGGTTTACA+AGG | - | chr1_3:1452066-1452085 | None:intergenic | 40.0% |
| TGTAAACCAACTGCACTTTC+TGG | + | chr1_3:1452066-1452085 | Msa0096020:CDS | 40.0% | |
| ! | GATAAACCAGAAAGTGCAGT+TGG | - | chr1_3:1452075-1452094 | None:intergenic | 40.0% |
| ! | TCTTGGAGGAGTTGATTGTT+CGG | + | chr1_3:1452294-1452313 | Msa0096020:CDS | 40.0% |
| ACGATTCATTACAAGGAGCA+TGG | + | chr1_3:1452357-1452376 | Msa0096020:CDS | 40.0% | |
| ! | CGATTCATTACAAGGAGCAT+GGG | + | chr1_3:1452358-1452377 | Msa0096020:CDS | 40.0% |
| ! | TTTGGGGCAAATATCAGCTT+TGG | + | chr1_3:1452650-1452669 | Msa0096020:intron | 40.0% |
| !! | GCTTTGGAATGCTTCTCAAT+TGG | + | chr1_3:1452666-1452685 | Msa0096020:intron | 40.0% |
| GAATGCTTCTCAATTGGAGA+TGG | + | chr1_3:1452672-1452691 | Msa0096020:CDS | 40.0% | |
| CAATTGGAGATGGTTCACTA+TGG | + | chr1_3:1452682-1452701 | Msa0096020:CDS | 40.0% | |
| GTTCACTATGGGAAAATGCA+CGG | + | chr1_3:1452694-1452713 | Msa0096020:CDS | 40.0% | |
| !! | GGAAAATGCACGGTTTTATG+CGG | + | chr1_3:1452704-1452723 | Msa0096020:CDS | 40.0% |
| TGGAATGGCCAAAAAAAAGG+AGG | - | chr1_3:1452752-1452771 | None:intergenic | 40.0% | |
| GGGCAAAGAAGATACTTGAA+TGG | + | chr1_3:1452921-1452940 | Msa0096020:CDS | 40.0% | |
| CATATCTCAAGTGCTTCTTC+AGG | - | chr1_3:1452956-1452975 | None:intergenic | 40.0% | |
| GATGCAGTTTCATGAGATGA+AGG | + | chr1_3:1453043-1453062 | Msa0096020:intron | 40.0% | |
| ATCCATTTCATACTGCAGTC+AGG | - | chr1_3:1453095-1453114 | None:intergenic | 40.0% | |
| TGACTGCAGTATGAAATGGA+TGG | + | chr1_3:1453094-1453113 | Msa0096020:intron | 40.0% | |
| GACTGCAGTATGAAATGGAT+GGG | + | chr1_3:1453095-1453114 | Msa0096020:intron | 40.0% | |
| AGGGATCCAAGTGGTTATAA+TGG | + | chr1_3:1453118-1453137 | Msa0096020:CDS | 40.0% | |
| ATGCAGCCATTATAACCACT+TGG | - | chr1_3:1453127-1453146 | None:intergenic | 40.0% | |
| TATATGTGGGGTACATGATC+AGG | + | chr1_3:1453153-1453172 | Msa0096020:CDS | 40.0% | |
| GTAGCAAACAAGAACAAAGC+AGG | - | chr1_3:1453183-1453202 | None:intergenic | 40.0% | |
| GTTTCTATTCATTTCAGGGG+TGG | + | chr1_3:1453483-1453502 | Msa0096020:intron | 40.0% | |
| AATCCTCAGGATTACAACAG+CGG | - | chr1_3:1453667-1453686 | None:intergenic | 40.0% | |
| GTACATGTTCTTCAATCCTC+AGG | - | chr1_3:1453680-1453699 | None:intergenic | 40.0% | |
| CCAAACAATGGCAAATTACC+AGG | - | chr1_3:1453855-1453874 | None:intergenic | 40.0% | |
| ! | CCTGGTAATTTGCCATTGTT+TGG | + | chr1_3:1453852-1453871 | Msa0096020:three_prime_UTR | 40.0% |
| TGGCTGATGATACTTGAAGT+AGG | + | chr1_3:1453872-1453891 | Msa0096020:three_prime_UTR | 40.0% | |
| ! | AGATTTTTGTTGCGTGGCGT+AGG | - | chr1_3:1450589-1450608 | None:intergenic | 45.0% |
| ! | GATCGGAGATTTTTGTTGCG+TGG | - | chr1_3:1450595-1450614 | None:intergenic | 45.0% |
| TCTGAACATCCAGTACACGA+CGG | - | chr1_3:1450709-1450728 | None:intergenic | 45.0% | |
| AACAACGGCAACAGGAACTT+TGG | - | chr1_3:1450790-1450809 | None:intergenic | 45.0% | |
| !! | GCTGAAGTTGGTGACACAAT+TGG | - | chr1_3:1450881-1450900 | None:intergenic | 45.0% |
| TAAAGTCACACTCAGTGGCA+AGG | - | chr1_3:1451096-1451115 | None:intergenic | 45.0% | |
| TATATTATAGGGTGAGGCGG+AGG | + | chr1_3:1451377-1451396 | Msa0096020:intron | 45.0% | |
| CTCACAATGTTGTGCCTCTT+TGG | + | chr1_3:1451538-1451557 | Msa0096020:CDS | 45.0% | |
| TTCTCAGAAGCAACCCAAAG+AGG | - | chr1_3:1451555-1451574 | None:intergenic | 45.0% | |
| ! | TTGGGTTGCTTCTGAGAAGT+TGG | + | chr1_3:1451557-1451576 | Msa0096020:CDS | 45.0% |
| TGAGGACCATGTCATAGACT+GGG | + | chr1_3:1451683-1451702 | Msa0096020:CDS | 45.0% | |
| AGACACGGCTGACAATAAGA+CGG | - | chr1_3:1451832-1451851 | None:intergenic | 45.0% | |
| TGTCAGTGCGAAGATTCACA+TGG | + | chr1_3:1451860-1451879 | Msa0096020:intron | 45.0% | |
| CTCAGCTCCACTCCTAATTT+AGG | - | chr1_3:1451926-1451945 | None:intergenic | 45.0% | |
| CTAAATTAGGAGTGGAGCTG+AGG | + | chr1_3:1451924-1451943 | Msa0096020:intron | 45.0% | |
| TCCATTGCAGCAATTTCTCC+AGG | - | chr1_3:1451973-1451992 | None:intergenic | 45.0% | |
| !! | TGCTGCAATGGAAGTGTTGA+TGG | + | chr1_3:1451981-1452000 | Msa0096020:CDS | 45.0% |
| !! | GCTGCAATGGAAGTGTTGAT+GGG | + | chr1_3:1451982-1452001 | Msa0096020:CDS | 45.0% |
| ACAAGGGTTATTGCGATCTG+TGG | - | chr1_3:1452049-1452068 | None:intergenic | 45.0% | |
| GGCTGTTGATACTTTCTTGG+AGG | + | chr1_3:1452280-1452299 | Msa0096020:intron | 45.0% | |
| ! | ATTACAAGGAGCATGGGAGT+GGG | + | chr1_3:1452364-1452383 | Msa0096020:CDS | 45.0% |
| AACATGTGGTCGCTTATCAG+AGG | - | chr1_3:1452414-1452433 | None:intergenic | 45.0% | |
| GTGACTCACGTGTAAACATG+TGG | - | chr1_3:1452428-1452447 | None:intergenic | 45.0% | |
| TTCTTACAGAAGGGAGCAGT+TGG | + | chr1_3:1452504-1452523 | Msa0096020:intron | 45.0% | |
| CACCTGACTGCAGTATGAAA+TGG | + | chr1_3:1453090-1453109 | Msa0096020:intron | 45.0% | |
| TGCAGTATGAAATGGATGGG+AGG | + | chr1_3:1453098-1453117 | Msa0096020:intron | 45.0% | |
| GCAGTATGAAATGGATGGGA+GGG | + | chr1_3:1453099-1453118 | Msa0096020:intron | 45.0% | |
| GTGGTTATAATGGCTGCATG+TGG | + | chr1_3:1453128-1453147 | Msa0096020:CDS | 45.0% | |
| GCTGCATGTGGTCTATATGT+GGG | + | chr1_3:1453140-1453159 | Msa0096020:CDS | 45.0% | |
| CTGCATGTGGTCTATATGTG+GGG | + | chr1_3:1453141-1453160 | Msa0096020:CDS | 45.0% | |
| GAGGAATTTCTGACTCCTGT+TGG | + | chr1_3:1453222-1453241 | Msa0096020:intron | 45.0% | |
| TGAGCTCAGGAAGAGAAAAG+CGG | + | chr1_3:1453610-1453629 | Msa0096020:CDS | 45.0% | |
| CCAGACAATGGCAAATTACC+AGG | - | chr1_3:1453740-1453759 | None:intergenic | 45.0% | |
| ! | CCTGGTAATTTGCCATTGTC+TGG | + | chr1_3:1453737-1453756 | Msa0096020:three_prime_UTR | 45.0% |
| AGTTTCGTCCTTGAACTGCA+AGG | - | chr1_3:1453940-1453959 | None:intergenic | 45.0% | |
| GTACTCCAACTCGAAAGAGT+TGG | + | chr1_3:1453968-1453987 | Msa0096020:three_prime_UTR | 45.0% | |
| ! | TGAGACCAACTCTTTCGAGT+TGG | - | chr1_3:1453976-1453995 | None:intergenic | 45.0% |
| CGCATTCGGACCTTGAAAGA+AGG | + | chr1_3:1450666-1450685 | Msa0096020:CDS | 50.0% | |
| CGGACCTTGAAAGAAGGTTC+TGG | + | chr1_3:1450672-1450691 | Msa0096020:CDS | 50.0% | |
| CTGAACATCCAGTACACGAC+GGG | - | chr1_3:1450708-1450727 | None:intergenic | 50.0% | |
| ! | GTGCAAAGGCGCGTCATTTA+GGG | + | chr1_3:1450835-1450854 | Msa0096020:CDS | 50.0% |
| TCGAGCCGGACAATTTCACA+GGG | + | chr1_3:1451303-1451322 | Msa0096020:intron | 50.0% | |
| TCGAACCACCAACTGCGAAA+TGG | + | chr1_3:1451652-1451671 | Msa0096020:CDS | 50.0% | |
| CGAACCACCAACTGCGAAAT+GGG | + | chr1_3:1451653-1451672 | Msa0096020:CDS | 50.0% | |
| ATGACCCATTTCGCAGTTGG+TGG | - | chr1_3:1451660-1451679 | None:intergenic | 50.0% | |
| GTGATGACCCATTTCGCAGT+TGG | - | chr1_3:1451663-1451682 | None:intergenic | 50.0% | |
| TGCGAAATGGGTCATCACTG+AGG | + | chr1_3:1451665-1451684 | Msa0096020:CDS | 50.0% | |
| CTGAGGACCATGTCATAGAC+TGG | + | chr1_3:1451682-1451701 | Msa0096020:CDS | 50.0% | |
| CTGAGGTTCCTGAAGTGGAT+TGG | + | chr1_3:1451941-1451960 | Msa0096020:CDS | 50.0% | |
| GCCTGGAGAAATTGCTGCAA+TGG | + | chr1_3:1451969-1451988 | Msa0096020:CDS | 50.0% | |
| GCTACGAGCTTCATATCCTC+AGG | + | chr1_3:1452152-1452171 | Msa0096020:CDS | 50.0% | |
| ! | CATTACAAGGAGCATGGGAG+TGG | + | chr1_3:1452363-1452382 | Msa0096020:CDS | 50.0% |
| GGCTGCATGTGGTCTATATG+TGG | + | chr1_3:1453139-1453158 | Msa0096020:CDS | 50.0% | |
| !!! | TGCTTTTGGTGCCTCTAGCT+AGG | + | chr1_3:1453299-1453318 | Msa0096020:intron | 50.0% |
| AACTACCACAGCCTAGCTAG+AGG | - | chr1_3:1453313-1453332 | None:intergenic | 50.0% | |
| ACTCCGCTGTTGTAATCCTG+AGG | + | chr1_3:1453661-1453680 | Msa0096020:CDS | 50.0% | |
| GTTGCACACCTTGCAGTTCA+AGG | + | chr1_3:1453929-1453948 | Msa0096020:three_prime_UTR | 50.0% | |
| GACGGTGTGGTAGCCATGAT+CGG | - | chr1_3:1450612-1450631 | None:intergenic | 55.0% | |
| TTCACCGACGGCGAAATTGG+CGG | - | chr1_3:1450639-1450658 | None:intergenic | 55.0% | |
| TCAAGGTCCGAATGCGACCA+GGG | - | chr1_3:1450662-1450681 | None:intergenic | 55.0% | |
| TTCAAGGTCCGAATGCGACC+AGG | - | chr1_3:1450663-1450682 | None:intergenic | 55.0% | |
| ! | GGTGCAAAGGCGCGTCATTT+AGG | + | chr1_3:1450834-1450853 | Msa0096020:CDS | 55.0% |
| ATGGGGGTAATTGCTCGAGC+CGG | + | chr1_3:1451289-1451308 | Msa0096020:intron | 55.0% | |
| CTCGAGCCGGACAATTTCAC+AGG | + | chr1_3:1451302-1451321 | Msa0096020:intron | 55.0% | |
| !! | GCAGTTGGTGGTTCGACATC+AGG | - | chr1_3:1451648-1451667 | None:intergenic | 55.0% |
| TGGAGCTGAGGTTCCTGAAG+TGG | + | chr1_3:1451936-1451955 | Msa0096020:CDS | 55.0% | |
| GGCTCACACCAATCCACTTC+AGG | - | chr1_3:1451952-1451971 | None:intergenic | 55.0% | |
| !! | GAAGTGGATTGGTGTGAGCC+TGG | + | chr1_3:1451952-1451971 | Msa0096020:CDS | 55.0% |
| ! | ATCAGAGGCGTGGTCGAGTA+AGG | - | chr1_3:1452399-1452418 | None:intergenic | 55.0% |
| CAGAAGGGAGCAGTTGGAGA+AGG | + | chr1_3:1452510-1452529 | Msa0096020:intron | 55.0% | |
| ATGGATGGGAGGGATCCAAG+TGG | + | chr1_3:1453109-1453128 | Msa0096020:CDS | 55.0% | |
| !!! | TGGCGAGAGCGTCCCATTTT+TGG | + | chr1_3:1453503-1453522 | Msa0096020:CDS | 55.0% |
| !!! | GGCGAGAGCGTCCCATTTTT+GGG | + | chr1_3:1453504-1453523 | Msa0096020:CDS | 55.0% |
| GGGTTCACCGACGGCGAAAT+TGG | - | chr1_3:1450642-1450661 | None:intergenic | 60.0% | |
| ATTTCGCCGTCGGTGAACCC+TGG | + | chr1_3:1450642-1450661 | Msa0096020:CDS | 60.0% | |
| ATGCGACCAGGGTTCACCGA+CGG | - | chr1_3:1450651-1450670 | None:intergenic | 60.0% | |
| CGGTGAACCCTGGTCGCATT+CGG | + | chr1_3:1450652-1450671 | Msa0096020:CDS | 60.0% | |
| AAACGGGTCCCGTCGTGTAC+TGG | + | chr1_3:1450697-1450716 | Msa0096020:CDS | 60.0% | |
| GTGGTCGCTTATCAGAGGCG+TGG | - | chr1_3:1452409-1452428 | None:intergenic | 60.0% | |
| TGGTGCCTCTAGCTAGGCTG+TGG | + | chr1_3:1453305-1453324 | Msa0096020:intron | 60.0% | |
| ACCGACGGCGAAATTGGCGG+CGG | - | chr1_3:1450636-1450655 | None:intergenic | 65.0% | |
| AATTGGCGGCGGCGACGGTG+TGG | - | chr1_3:1450625-1450644 | None:intergenic | 70.0% | |
| GGCGAAATTGGCGGCGGCGA+CGG | - | chr1_3:1450630-1450649 | None:intergenic | 70.0% | |
| GCCGCCGCCAATTTCGCCGT+CGG | + | chr1_3:1450632-1450651 | Msa0096020:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 1450573 | 1454110 | 1450573 | ID=Msa0096020;Name=Msa0096020 |
| chr1_3 | mRNA | 1450573 | 1454110 | 1450573 | ID=Msa0096020-mRNA-1;Parent=Msa0096020;Name=Msa0096020-mRNA-1;_AED=0.12;_eAED=0.12;_QI=42|1|1|1|1|1|9|422|499 |
| chr1_3 | exon | 1450573 | 1450932 | 1450573 | ID=Msa0096020-mRNA-1:exon:278;Parent=Msa0096020-mRNA-1 |
| chr1_3 | exon | 1451387 | 1451730 | 1451387 | ID=Msa0096020-mRNA-1:exon:279;Parent=Msa0096020-mRNA-1 |
| chr1_3 | exon | 1451933 | 1452173 | 1451933 | ID=Msa0096020-mRNA-1:exon:280;Parent=Msa0096020-mRNA-1 |
| chr1_3 | exon | 1452281 | 1452438 | 1452281 | ID=Msa0096020-mRNA-1:exon:281;Parent=Msa0096020-mRNA-1 |
| chr1_3 | exon | 1452513 | 1452549 | 1452513 | ID=Msa0096020-mRNA-1:exon:282;Parent=Msa0096020-mRNA-1 |
| chr1_3 | exon | 1452667 | 1452725 | 1452667 | ID=Msa0096020-mRNA-1:exon:283;Parent=Msa0096020-mRNA-1 |
| chr1_3 | exon | 1452913 | 1452994 | 1452913 | ID=Msa0096020-mRNA-1:exon:284;Parent=Msa0096020-mRNA-1 |
| chr1_3 | exon | 1453103 | 1453174 | 1453103 | ID=Msa0096020-mRNA-1:exon:285;Parent=Msa0096020-mRNA-1 |
| chr1_3 | exon | 1453500 | 1454110 | 1453500 | ID=Msa0096020-mRNA-1:exon:286;Parent=Msa0096020-mRNA-1 |
| chr1_3 | five_prime_UTR | 1450573 | 1450614 | 1450573 | ID=Msa0096020-mRNA-1:five_prime_utr;Parent=Msa0096020-mRNA-1 |
| chr1_3 | CDS | 1450615 | 1450932 | 1450615 | ID=Msa0096020-mRNA-1:cds;Parent=Msa0096020-mRNA-1 |
| chr1_3 | CDS | 1451387 | 1451730 | 1451387 | ID=Msa0096020-mRNA-1:cds;Parent=Msa0096020-mRNA-1 |
| chr1_3 | CDS | 1451933 | 1452173 | 1451933 | ID=Msa0096020-mRNA-1:cds;Parent=Msa0096020-mRNA-1 |
| chr1_3 | CDS | 1452281 | 1452438 | 1452281 | ID=Msa0096020-mRNA-1:cds;Parent=Msa0096020-mRNA-1 |
| chr1_3 | CDS | 1452513 | 1452549 | 1452513 | ID=Msa0096020-mRNA-1:cds;Parent=Msa0096020-mRNA-1 |
| chr1_3 | CDS | 1452667 | 1452725 | 1452667 | ID=Msa0096020-mRNA-1:cds;Parent=Msa0096020-mRNA-1 |
| chr1_3 | CDS | 1452913 | 1452994 | 1452913 | ID=Msa0096020-mRNA-1:cds;Parent=Msa0096020-mRNA-1 |
| chr1_3 | CDS | 1453103 | 1453174 | 1453103 | ID=Msa0096020-mRNA-1:cds;Parent=Msa0096020-mRNA-1 |
| chr1_3 | CDS | 1453500 | 1453688 | 1453500 | ID=Msa0096020-mRNA-1:cds;Parent=Msa0096020-mRNA-1 |
| chr1_3 | three_prime_UTR | 1453689 | 1454110 | 1453689 | ID=Msa0096020-mRNA-1:three_prime_utr;Parent=Msa0096020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
