Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379540 | XP_013461683.2 | 94.118 | 527 | 27 | 1 | 1 | 523 | 1 | 527 | 0.0 | 1012 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379540 | sp|Q3E911|PP400_ARATH | 53.895 | 475 | 211 | 4 | 39 | 508 | 20 | 491 | 4.32e-177 | 510 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379540 | A0A072V2Y1 | 94.118 | 527 | 27 | 1 | 1 | 523 | 1 | 527 | 0.0 | 1011 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0379540 | 0.843636 | 1.240641e-58 | -8.615850e-47 |
| Msa0030030 | Msa0379540 | 0.826133 | 3.206062e-54 | -8.615850e-47 |
| Msa0055280 | Msa0379540 | 0.847073 | 1.456193e-59 | -8.615850e-47 |
| Msa0077330 | Msa0379540 | 0.813186 | 2.907458e-51 | -8.615850e-47 |
| Msa0096020 | Msa0379540 | 0.852108 | 5.730135e-61 | -8.615850e-47 |
| Msa0101060 | Msa0379540 | 0.843158 | 1.664579e-58 | -8.615850e-47 |
| Msa0153440 | Msa0379540 | 0.812048 | 5.157364e-51 | -8.615850e-47 |
| Msa0169960 | Msa0379540 | 0.831143 | 1.972506e-55 | -8.615850e-47 |
| Msa0203180 | Msa0379540 | 0.812614 | 3.879940e-51 | -8.615850e-47 |
| Msa0213090 | Msa0379540 | 0.803218 | 3.872107e-49 | -8.615850e-47 |
| Msa0223100 | Msa0379540 | 0.843360 | 1.470266e-58 | -8.615850e-47 |
| Msa0223290 | Msa0379540 | 0.833360 | 5.577275e-56 | -8.615850e-47 |
| Msa0223380 | Msa0379540 | 0.837924 | 3.899718e-57 | -8.615850e-47 |
| Msa0232860 | Msa0379540 | 0.823669 | 1.222877e-53 | -8.615850e-47 |
| Msa0379540 | Msa0389050 | 0.826191 | 3.105903e-54 | -8.615850e-47 |
| Msa0379540 | Msa0393520 | 0.800304 | 1.534862e-48 | -8.615850e-47 |
| Msa0379540 | Msa0404220 | 0.966943 | 1.335125e-126 | -8.615850e-47 |
| Msa0379540 | Msa0404230 | 0.846791 | 1.739672e-59 | -8.615850e-47 |
| Msa0379540 | Msa0411000 | 0.804012 | 2.649999e-49 | -8.615850e-47 |
| Msa0379540 | Msa0419620 | -0.806292 | 8.830974e-50 | -8.615850e-47 |
| Msa0379540 | Msa0431520 | 0.816855 | 4.459362e-52 | -8.615850e-47 |
| Msa0379540 | Msa0431830 | 0.836488 | 9.089209e-57 | -8.615850e-47 |
| Msa0379540 | Msa0475400 | 0.966384 | 7.546540e-126 | -8.615850e-47 |
| Msa0379540 | Msa0475410 | 0.801247 | 9.854340e-49 | -8.615850e-47 |
| Msa0379540 | Msa0488850 | 0.810161 | 1.322857e-50 | -8.615850e-47 |
| Msa0379540 | Msa0502910 | 0.802480 | 5.498741e-49 | -8.615850e-47 |
| Msa0379540 | Msa0510560 | 0.801788 | 7.632556e-49 | -8.615850e-47 |
| Msa0379540 | Msa0530380 | 0.839992 | 1.137121e-57 | -8.615850e-47 |
| Msa0379540 | Msa0533460 | 0.815716 | 8.015534e-52 | -8.615850e-47 |
| Msa0379540 | Msa0549740 | 0.814502 | 1.491104e-51 | -8.615850e-47 |
| Msa0379540 | Msa0579340 | 0.829241 | 5.748226e-55 | -8.615850e-47 |
| Msa0379540 | Msa0580540 | 0.839771 | 1.298037e-57 | -8.615850e-47 |
| Msa0379540 | Msa0620640 | 0.845047 | 5.179639e-59 | -8.615850e-47 |
| Msa0379540 | Msa0620750 | 0.808140 | 3.584062e-50 | -8.615850e-47 |
| Msa0379540 | Msa0621780 | 0.837528 | 4.929377e-57 | -8.615850e-47 |
| Msa0379540 | Msa0622340 | 0.808143 | 3.579376e-50 | -8.615850e-47 |
| Msa0379540 | Msa0639030 | 0.802231 | 6.187884e-49 | -8.615850e-47 |
| Msa0379540 | Msa0643020 | -0.800763 | 1.237412e-48 | -8.615850e-47 |
| Msa0379540 | Msa0644770 | -0.806869 | 6.672183e-50 | -8.615850e-47 |
| Msa0379540 | Msa0646390 | 0.814714 | 1.338658e-51 | -8.615850e-47 |
| Msa0379540 | Msa0650650 | 0.817832 | 2.688171e-52 | -8.615850e-47 |
| Msa0379540 | Msa0650740 | 0.819276 | 1.264161e-52 | -8.615850e-47 |
| Msa0379540 | Msa0656270 | 0.815053 | 1.126017e-51 | -8.615850e-47 |
| Msa0379540 | Msa0697600 | 0.806755 | 7.050480e-50 | -8.615850e-47 |
| Msa0379540 | Msa0700070 | 0.808688 | 2.738312e-50 | -8.615850e-47 |
| Msa0379540 | Msa0731710 | 0.806200 | 9.233505e-50 | -8.615850e-47 |
| Msa0379540 | Msa0739610 | 0.812147 | 4.907835e-51 | -8.615850e-47 |
| Msa0379540 | Msa0743640 | 0.829298 | 5.566212e-55 | -8.615850e-47 |
| Msa0379540 | Msa0754350 | 0.879770 | 9.499944e-70 | -8.615850e-47 |
| Msa0379540 | Msa0755090 | 0.812856 | 3.434802e-51 | -8.615850e-47 |
| Msa0379540 | Msa0756410 | 0.813429 | 2.570754e-51 | -8.615850e-47 |
| Msa0379540 | Msa0771960 | 0.802596 | 5.203511e-49 | -8.615850e-47 |
| Msa0379540 | Msa0774810 | -0.802200 | 6.280940e-49 | -8.615850e-47 |
| Msa0379540 | Msa0782030 | 0.816995 | 4.147517e-52 | -8.615850e-47 |
| Msa0379540 | Msa0787720 | 0.821537 | 3.830978e-53 | -8.615850e-47 |
| Msa0379540 | Msa0787730 | 0.808967 | 2.387516e-50 | -8.615850e-47 |
| Msa0379540 | Msa0795710 | 0.837490 | 5.040561e-57 | -8.615850e-47 |
| Msa0379540 | Msa0796950 | 0.806825 | 6.815623e-50 | -8.615850e-47 |
| Msa0379540 | Msa0797000 | 0.812476 | 4.159925e-51 | -8.615850e-47 |
| Msa0379540 | Msa0811940 | 0.816062 | 6.710542e-52 | -8.615850e-47 |
| Msa0379540 | Msa0819670 | 0.808492 | 3.016040e-50 | -8.615850e-47 |
| Msa0379540 | Msa0824770 | 0.801779 | 7.664318e-49 | -8.615850e-47 |
| Msa0379540 | Msa0833450 | 0.827631 | 1.406493e-54 | -8.615850e-47 |
| Msa0379540 | Msa0834450 | 0.801894 | 7.259478e-49 | -8.615850e-47 |
| Msa0379540 | Msa0834460 | 0.818892 | 1.545926e-52 | -8.615850e-47 |
| Msa0379540 | Msa0853500 | 0.802329 | 5.908674e-49 | -8.615850e-47 |
| Msa0379540 | Msa0863760 | 0.830213 | 3.333493e-55 | -8.615850e-47 |
| Msa0379540 | Msa0867810 | 0.807704 | 4.438148e-50 | -8.615850e-47 |
| Msa0379540 | Msa0883660 | 0.808920 | 2.443103e-50 | -8.615850e-47 |
| Msa0379540 | Msa0883670 | 0.802015 | 6.854807e-49 | -8.615850e-47 |
| Msa0379540 | Msa0885100 | 0.803798 | 2.935182e-49 | -8.615850e-47 |
| Msa0379540 | Msa0887070 | 0.860801 | 1.603163e-63 | -8.615850e-47 |
| Msa0379540 | Msa0903730 | 0.820042 | 8.451592e-53 | -8.615850e-47 |
| Msa0379540 | Msa0950410 | 0.878204 | 3.392185e-69 | -8.615850e-47 |
| Msa0379540 | Msa0950620 | 0.840929 | 6.467052e-58 | -8.615850e-47 |
| Msa0379540 | Msa0964680 | 0.811578 | 6.526935e-51 | -8.615850e-47 |
| Msa0379540 | Msa0971860 | 0.807686 | 4.477679e-50 | -8.615850e-47 |
| Msa0379540 | Msa0973130 | 0.800774 | 1.230986e-48 | -8.615850e-47 |
| Msa0379540 | Msa0973230 | 0.818586 | 1.814868e-52 | -8.615850e-47 |
| Msa0379540 | Msa0982590 | 0.843888 | 1.062177e-58 | -8.615850e-47 |
| Msa0379540 | Msa0984850 | 0.801223 | 9.964752e-49 | -8.615850e-47 |
| Msa0379540 | Msa1016110 | 0.817842 | 2.673286e-52 | -8.615850e-47 |
| Msa0379540 | Msa1037020 | 0.813253 | 2.811004e-51 | -8.615850e-47 |
| Msa0379540 | Msa1069180 | 0.810610 | 1.057979e-50 | -8.615850e-47 |
| Msa0379540 | Msa1118140 | 0.803331 | 3.669127e-49 | -8.615850e-47 |
| Msa0379540 | Msa1120620 | 0.834794 | 2.439357e-56 | -8.615850e-47 |
| Msa0379540 | Msa1157020 | 0.821982 | 3.022634e-53 | -8.615850e-47 |
| Msa0379540 | Msa1164530 | 0.814643 | 1.387679e-51 | -8.615850e-47 |
| Msa0379540 | Msa1177620 | 0.803025 | 4.243783e-49 | -8.615850e-47 |
| Msa0379540 | Msa1182830 | 0.821179 | 4.633378e-53 | -8.615850e-47 |
| Msa0379540 | Msa1188820 | 0.812938 | 3.295420e-51 | -8.615850e-47 |
| Msa0379540 | Msa1211390 | 0.813730 | 2.207560e-51 | -8.615850e-47 |
| Msa0379540 | Msa1218650 | 0.811055 | 8.476984e-51 | -8.615850e-47 |
| Msa0379540 | Msa1225820 | 0.811287 | 7.548195e-51 | -8.615850e-47 |
| Msa0379540 | Msa1237260 | 0.817137 | 3.854441e-52 | -8.615850e-47 |
| Msa0379540 | Msa1242990 | 0.808972 | 2.381861e-50 | -8.615850e-47 |
| Msa0379540 | Msa1272960 | 0.835659 | 1.475728e-56 | -8.615850e-47 |
| Msa0379540 | Msa1282210 | 0.817734 | 2.827299e-52 | -8.615850e-47 |
| Msa0379540 | Msa1306700 | 0.822548 | 2.233926e-53 | -8.615850e-47 |
| Msa0379540 | Msa1317710 | 0.832515 | 9.044887e-56 | -8.615850e-47 |
| Msa0379540 | Msa1343340 | 0.819027 | 1.440970e-52 | -8.615850e-47 |
| Msa0379540 | Msa1356180 | 0.816204 | 6.239845e-52 | -8.615850e-47 |
| Msa0379540 | Msa1403950 | 0.847213 | 1.333116e-59 | -8.615850e-47 |
| Msa0379540 | Msa1405470 | 0.836017 | 1.197006e-56 | -8.615850e-47 |
| Msa0379540 | Msa1419110 | 0.814813 | 1.272399e-51 | -8.615850e-47 |
| Msa0379540 | Msa1424510 | 0.800995 | 1.109522e-48 | -8.615850e-47 |
| Msa0379540 | Msa1426750 | 0.801320 | 9.518769e-49 | -8.615850e-47 |
| Msa0379540 | Msa1439230 | 0.812993 | 3.204662e-51 | -8.615850e-47 |
| Msa0379540 | Msa1460310 | -0.821302 | 4.340231e-53 | -8.615850e-47 |
| Msa0253370 | Msa0379540 | 0.817723 | 2.843533e-52 | -8.615850e-47 |
| Msa0264940 | Msa0379540 | -0.819633 | 1.048221e-52 | -8.615850e-47 |
| Msa0281940 | Msa0379540 | 0.818068 | 2.377353e-52 | -8.615850e-47 |
| Msa0284870 | Msa0379540 | 0.816172 | 6.341920e-52 | -8.615850e-47 |
| Msa0288320 | Msa0379540 | 0.815294 | 9.950235e-52 | -8.615850e-47 |
| Msa0292180 | Msa0379540 | 0.830540 | 2.773410e-55 | -8.615850e-47 |
| Msa0302650 | Msa0379540 | 0.825119 | 5.576451e-54 | -8.615850e-47 |
| Msa0302990 | Msa0379540 | -0.821216 | 4.542162e-53 | -8.615850e-47 |
| Msa0318070 | Msa0379540 | 0.803690 | 3.091176e-49 | -8.615850e-47 |
| Msa0323630 | Msa0379540 | 0.804917 | 1.716262e-49 | -8.615850e-47 |
| Msa0329550 | Msa0379540 | 0.813029 | 3.147726e-51 | -8.615850e-47 |
| Msa0330400 | Msa0379540 | 0.818426 | 1.972523e-52 | -8.615850e-47 |
| Msa0339870 | Msa0379540 | 0.806036 | 9.996063e-50 | -8.615850e-47 |
| Msa0349050 | Msa0379540 | 0.847840 | 8.966453e-60 | -8.615850e-47 |
| Msa0362430 | Msa0379540 | 0.811641 | 6.325772e-51 | -8.615850e-47 |
| Msa0363100 | Msa0379540 | 0.822025 | 2.954137e-53 | -8.615850e-47 |
| Msa0363170 | Msa0379540 | 0.810526 | 1.103244e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379540 | MtrunA17_Chr3g0132571 | 92.925 | 523 | 17 | 1 | 1 | 523 | 1 | 503 | 0.0 | 999 |
| Msa0379540 | MtrunA17_Chr8g0359961 | 31.965 | 463 | 311 | 3 | 50 | 511 | 26 | 485 | 4.71e-76 | 248 |
| Msa0379540 | MtrunA17_Chr1g0185601 | 31.138 | 501 | 329 | 8 | 28 | 518 | 2 | 496 | 5.93e-75 | 246 |
| Msa0379540 | MtrunA17_Chr2g0282091 | 28.041 | 485 | 341 | 4 | 40 | 519 | 7 | 488 | 6.21e-60 | 205 |
| Msa0379540 | MtrunA17_Chr4g0021331 | 28.894 | 443 | 291 | 9 | 75 | 506 | 45 | 474 | 6.08e-59 | 202 |
| Msa0379540 | MtrunA17_Chr8g0368151 | 29.442 | 394 | 273 | 3 | 77 | 468 | 43 | 433 | 2.24e-57 | 198 |
| Msa0379540 | MtrunA17_Chr1g0155351 | 29.602 | 402 | 274 | 5 | 6 | 405 | 8 | 402 | 1.88e-56 | 194 |
| Msa0379540 | MtrunA17_Chr2g0303221 | 28.916 | 415 | 277 | 8 | 61 | 466 | 32 | 437 | 6.07e-56 | 195 |
| Msa0379540 | MtrunA17_Chr2g0324251 | 29.929 | 421 | 282 | 5 | 74 | 486 | 49 | 464 | 2.25e-52 | 185 |
| Msa0379540 | MtrunA17_Chr1g0194521 | 28.606 | 416 | 282 | 7 | 56 | 466 | 89 | 494 | 2.13e-51 | 183 |
| Msa0379540 | MtrunA17_Chr8g0335951 | 25.676 | 296 | 192 | 4 | 244 | 518 | 160 | 448 | 3.50e-31 | 125 |
| Msa0379540 | MtrunA17_Chr8g0349421 | 27.426 | 237 | 168 | 1 | 282 | 518 | 4 | 236 | 4.62e-28 | 112 |
| Msa0379540 | MtrunA17_Chr7g0256181 | 23.974 | 463 | 323 | 10 | 54 | 508 | 156 | 597 | 3.30e-27 | 115 |
| Msa0379540 | MtrunA17_Chr1g0171501 | 24.545 | 440 | 308 | 11 | 76 | 508 | 158 | 580 | 4.76e-25 | 108 |
| Msa0379540 | MtrunA17_Chr2g0328121 | 20.682 | 469 | 362 | 6 | 57 | 519 | 41 | 505 | 2.08e-20 | 94.4 |
| Msa0379540 | MtrunA17_Chr8g0349431 | 34.259 | 108 | 70 | 1 | 76 | 182 | 12 | 119 | 1.45e-15 | 73.6 |
| Msa0379540 | MtrunA17_Chr8g0359551 | 24.176 | 273 | 202 | 3 | 160 | 431 | 214 | 482 | 3.71e-13 | 72.0 |
| Msa0379540 | MtrunA17_Chr1g0170071 | 23.891 | 293 | 198 | 6 | 65 | 355 | 578 | 847 | 1.35e-12 | 70.5 |
| Msa0379540 | MtrunA17_Chr6g0481621 | 21.930 | 342 | 250 | 9 | 95 | 430 | 231 | 561 | 5.41e-11 | 65.1 |
| Msa0379540 | MtrunA17_Chr1g0168811 | 21.186 | 354 | 236 | 7 | 112 | 426 | 203 | 552 | 6.23e-11 | 65.1 |
| Msa0379540 | MtrunA17_Chr8g0353181 | 22.393 | 326 | 241 | 5 | 164 | 487 | 171 | 486 | 7.21e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379540 | AT5G27460.1 | 53.895 | 475 | 211 | 4 | 39 | 508 | 20 | 491 | 4.39e-178 | 510 |
| Msa0379540 | AT1G02150.1 | 34.375 | 384 | 246 | 3 | 76 | 458 | 86 | 464 | 7.96e-80 | 259 |
| Msa0379540 | AT4G02820.1 | 30.802 | 474 | 322 | 4 | 46 | 519 | 50 | 517 | 2.91e-77 | 253 |
| Msa0379540 | AT4G21705.1 | 29.892 | 465 | 322 | 3 | 56 | 518 | 24 | 486 | 2.44e-68 | 228 |
| Msa0379540 | AT1G02370.1 | 28.667 | 450 | 309 | 5 | 76 | 519 | 90 | 533 | 2.27e-65 | 221 |
| Msa0379540 | AT2G20710.1 | 30.465 | 430 | 294 | 4 | 34 | 462 | 15 | 440 | 4.20e-64 | 217 |
| Msa0379540 | AT1G60770.1 | 31.738 | 397 | 264 | 4 | 126 | 518 | 91 | 484 | 7.63e-61 | 208 |
| Msa0379540 | AT4G01990.1 | 27.865 | 445 | 313 | 4 | 76 | 518 | 59 | 497 | 7.26e-57 | 198 |
| Msa0379540 | AT5G09450.1 | 31.105 | 344 | 232 | 4 | 55 | 395 | 53 | 394 | 7.96e-56 | 192 |
| Msa0379540 | AT2G20710.2 | 30.946 | 349 | 236 | 4 | 115 | 462 | 1 | 345 | 4.77e-48 | 171 |
| Msa0379540 | AT1G28020.1 | 30.675 | 326 | 214 | 4 | 74 | 393 | 53 | 372 | 5.62e-43 | 160 |
| Msa0379540 | AT1G80270.1 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.31e-28 | 119 |
| Msa0379540 | AT1G80270.3 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.31e-28 | 119 |
| Msa0379540 | AT1G80270.2 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.31e-28 | 119 |
| Msa0379540 | AT1G80270.5 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.31e-28 | 119 |
| Msa0379540 | AT1G80270.4 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.31e-28 | 119 |
| Msa0379540 | AT1G15480.1 | 22.146 | 438 | 322 | 9 | 76 | 508 | 145 | 568 | 1.27e-24 | 108 |
| Msa0379540 | AT3G11380.1 | 27.653 | 311 | 186 | 8 | 92 | 398 | 78 | 353 | 1.88e-20 | 95.1 |
| Msa0379540 | AT3G11380.1 | 32.044 | 181 | 114 | 4 | 72 | 243 | 360 | 540 | 7.65e-15 | 77.8 |
| Msa0379540 | AT3G15590.1 | 22.917 | 432 | 322 | 6 | 76 | 506 | 160 | 581 | 2.37e-20 | 95.1 |
| Msa0379540 | AT3G15590.2 | 22.917 | 432 | 322 | 6 | 76 | 506 | 160 | 581 | 2.37e-20 | 95.1 |
| Msa0379540 | AT1G28000.1 | 26.457 | 223 | 157 | 4 | 75 | 293 | 51 | 270 | 1.63e-18 | 88.2 |
| Msa0379540 | AT1G07590.1 | 21.711 | 456 | 349 | 6 | 68 | 519 | 76 | 527 | 9.54e-18 | 86.7 |
| Msa0379540 | AT1G43010.1 | 28.638 | 213 | 142 | 3 | 74 | 285 | 53 | 256 | 1.85e-17 | 82.8 |
| Msa0379540 | AT2G31400.2 | 25.000 | 268 | 197 | 3 | 160 | 426 | 270 | 534 | 2.00e-14 | 76.6 |
| Msa0379540 | AT2G31400.1 | 25.000 | 268 | 197 | 3 | 160 | 426 | 270 | 534 | 2.26e-14 | 76.6 |
| Msa0379540 | AT2G32630.1 | 24.014 | 279 | 189 | 7 | 158 | 426 | 294 | 559 | 3.96e-12 | 69.3 |
| Msa0379540 | AT3G06920.2 | 20.968 | 310 | 229 | 7 | 159 | 464 | 183 | 480 | 9.32e-12 | 68.2 |
| Msa0379540 | AT3G06920.3 | 20.968 | 310 | 229 | 7 | 159 | 464 | 183 | 480 | 9.32e-12 | 68.2 |
| Msa0379540 | AT3G06920.1 | 20.968 | 310 | 229 | 7 | 159 | 464 | 169 | 466 | 1.08e-11 | 68.2 |
| Msa0379540 | AT5G02860.1 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.95e-11 | 65.1 |
| Msa0379540 | AT5G02860.4 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.95e-11 | 65.1 |
| Msa0379540 | AT5G02860.2 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.95e-11 | 65.1 |
| Msa0379540 | AT5G02860.5 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.95e-11 | 65.1 |
| Msa0379540 | AT5G02860.3 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.95e-11 | 65.1 |
Find 195 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTAATCCATTAGAATTTA+TGG | 0.026049 | 3_1:+80726858 | Msa0379540:three_prime_UTR |
| CATTGCCAGTGCTTCAAAAT+TGG | 0.126495 | 3_1:+80724853 | Msa0379540:CDS |
| GAGACTGTTTCCATTCTTAA+AGG | 0.176026 | 3_1:+80726817 | Msa0379540:CDS |
| ATTAGCCATAGCTGAATATT+TGG | 0.185459 | 3_1:+80726624 | Msa0379540:CDS |
| AATCATTGACCAGCTGAAAA+TGG | 0.194638 | 3_1:-80727415 | None:intergenic |
| AGTTTCATCATTTCATTATA+AGG | 0.208074 | 3_1:-80725863 | None:intergenic |
| AAATATTCACTTCATGAAAA+AGG | 0.223695 | 3_1:-80726986 | None:intergenic |
| TCTTCCACCAACTGCCTTAC+TGG | 0.224446 | 3_1:-80726257 | None:intergenic |
| CACTCACGTTACTAGGGTTC+TGG | 0.230426 | 3_1:-80729568 | Msa0379550:CDS |
| AGAGGGCCAAGGCGCGATTT+TGG | 0.235373 | 3_1:-80729310 | Msa0379550:CDS |
| CCATTCTCTGAAGATTCTTC+TGG | 0.238798 | 3_1:-80726344 | None:intergenic |
| ATGTAAACAACACGTGTATT+AGG | 0.239103 | 3_1:-80726917 | None:intergenic |
| GAAGACAGAGTATAAATTAA+TGG | 0.266357 | 3_1:+80727455 | Msa0379540:three_prime_UTR |
| ATTAATGGCTATCAAGCTTT+TGG | 0.270529 | 3_1:+80727470 | Msa0379540:three_prime_UTR |
| CATGAACGTCTCAGCTTTAC+TGG | 0.276241 | 3_1:-80725801 | None:intergenic |
| TAAAATCTTCTTCAACATAT+TGG | 0.276929 | 3_1:+80729489 | Msa0379540:three_prime_UTR |
| TTTGGTATATTTGTAGAATC+TGG | 0.278988 | 3_1:+80727488 | Msa0379540:three_prime_UTR |
| AATTTGCCGCTAAATGTAAA+TGG | 0.286570 | 3_1:-80724555 | None:intergenic |
| TCGCGCCTTGGCCCTCTCAT+AGG | 0.290203 | 3_1:+80729316 | Msa0379540:three_prime_UTR |
| AAGTGGGCTCTTGAACTAAA+AGG | 0.296086 | 3_1:-80729521 | Msa0379550:CDS |
| ATCACAGATATTCATAATTT+AGG | 0.309949 | 3_1:+80726682 | Msa0379540:CDS |
| ATTTCCCACGTCTTGTAGTT+TGG | 0.313223 | 3_1:-80726490 | None:intergenic |
| TTTGGATTTGATGAGCCTTC+TGG | 0.315146 | 3_1:-80724922 | None:intergenic |
| AATGATCAATAAAGACAAAA+TGG | 0.322417 | 3_1:+80726783 | Msa0379540:CDS |
| GGAGACTCACTCACGTTACT+AGG | 0.328682 | 3_1:-80729575 | Msa0379550:CDS |
| CTGCGAAGAGAAGAAGTATA+TGG | 0.336111 | 3_1:-80724705 | None:intergenic |
| GTTTCATCATTTCATTATAA+GGG | 0.337687 | 3_1:-80725862 | None:intergenic |
| CATGTTCAAGCTGAAGTGTT+TGG | 0.351636 | 3_1:+80726937 | Msa0379540:three_prime_UTR |
| GATATTCATAATTTAGGTCT+TGG | 0.351730 | 3_1:+80726688 | Msa0379540:CDS |
| GACATCTTCATCAGCTTAAG+AGG | 0.360365 | 3_1:-80728596 | Msa0379550:exon |
| GGCGTGCATTCTTTGATAAC+AGG | 0.364374 | 3_1:+80728667 | Msa0379540:three_prime_UTR |
| AATCACTAGTGATTCTGATA+TGG | 0.369693 | 3_1:+80729391 | Msa0379540:three_prime_UTR |
| TGTGATGAGGGAGAGCGATA+TGG | 0.373547 | 3_1:+80725992 | Msa0379540:CDS |
| GGCAATGGAGTTTGCGTTGA+AGG | 0.373565 | 3_1:-80724837 | None:intergenic |
| ACAGGTACCTTCTTATAAAC+AGG | 0.378107 | 3_1:+80729434 | Msa0379540:three_prime_UTR |
| AAATGATGAGAATGTTGAAA+TGG | 0.383490 | 3_1:+80726051 | Msa0379540:CDS |
| CCCAGTGAAGCCTTTAAGAA+TGG | 0.389532 | 3_1:-80726827 | None:intergenic |
| GAGCAATCCATAAATTCTAA+TGG | 0.389560 | 3_1:-80726865 | None:intergenic |
| GGCTTTGCTGATATTGCTGT+TGG | 0.390337 | 3_1:-80728799 | Msa0379550:CDS |
| ATGTTCTGTCTTACAACCTT+TGG | 0.391181 | 3_1:+80725960 | Msa0379540:CDS |
| TTCCCTCAAGTCCACTTTCA+AGG | 0.391350 | 3_1:+80728848 | Msa0379540:three_prime_UTR |
| ATTGCCAGTGCTTCAAAATT+GGG | 0.393171 | 3_1:+80724854 | Msa0379540:CDS |
| CATGGAGAAGCTCTATGAAC+TGG | 0.396411 | 3_1:+80725820 | Msa0379540:CDS |
| TATTGCCATGAAAAGAGCTT+TGG | 0.402179 | 3_1:+80726558 | Msa0379540:CDS |
| CACTTGACCCTCAGGACAAA+TGG | 0.402811 | 3_1:+80729539 | Msa0379540:three_prime_UTR |
| AACTTCAGAGCATGATCAGC+TGG | 0.404901 | 3_1:-80725653 | None:intergenic |
| TGTAAACAACACGTGTATTA+GGG | 0.404953 | 3_1:-80726916 | None:intergenic |
| GGCTAAATTCGCCGATGATA+AGG | 0.406052 | 3_1:-80729288 | Msa0379550:intron |
| TCCATTCTTAAAGGCTTCAC+TGG | 0.406952 | 3_1:+80726826 | Msa0379540:CDS |
| TAACAAGCTTGGTGAAGCTT+GGG | 0.412299 | 3_1:+80726308 | Msa0379540:CDS |
| CTTAAAGGCTTCACTGGGTA+AGG | 0.413189 | 3_1:+80726832 | Msa0379540:CDS |
| ATCCTTGAAAGTGGACTTGA+GGG | 0.416245 | 3_1:-80728850 | Msa0379550:CDS |
| CCATGGACTCTGTATCAATC+AGG | 0.416951 | 3_1:+80728728 | Msa0379540:three_prime_UTR |
| CTTGAGGGAAGGCGCTACTT+TGG | 0.416974 | 3_1:-80728835 | Msa0379550:CDS |
| AGGAGGGAGTCTTGCGGCTG+TGG | 0.422261 | 3_1:+80726230 | Msa0379540:CDS |
| TAGAGTATGTTGATGAGATC+TGG | 0.424571 | 3_1:-80729367 | Msa0379550:CDS |
| GCTTTCTTTCCAGCTGAGTC+AGG | 0.427827 | 3_1:-80725734 | None:intergenic |
| CAGTAAAGCTGAGACGTTCA+TGG | 0.430914 | 3_1:+80725802 | Msa0379540:CDS |
| TCATTGAAGGATATGTCAAT+TGG | 0.432642 | 3_1:+80726515 | Msa0379540:CDS |
| TTTGCACACAGGTATTCAAC+TGG | 0.435844 | 3_1:+80725600 | Msa0379540:intron |
| GAATGCGTGATTGTAGCGTT+TGG | 0.439592 | 3_1:-80724940 | None:intergenic |
| TGTTAGTATGCAAATATAGT+TGG | 0.439822 | 3_1:-80726290 | None:intergenic |
| TACTTTGGAGGTGAAAATAT+AGG | 0.440103 | 3_1:-80728820 | Msa0379550:CDS |
| ATAACATTTGTTAGAGAACT+AGG | 0.446766 | 3_1:-80729639 | Msa0379550:five_prime_UTR |
| CCAGAAGAATCTTCAGAGAA+TGG | 0.455350 | 3_1:+80726344 | Msa0379540:CDS |
| GTGATGAGGGAGAGCGATAT+GGG | 0.460171 | 3_1:+80725993 | Msa0379540:CDS |
| ATCATTGACCAGCTGAAAAT+GGG | 0.460791 | 3_1:-80727414 | None:intergenic |
| ACATGTAGACAGTTTCTCTT+CGG | 0.461851 | 3_1:-80726155 | None:intergenic |
| TTACCGTCATGCACAAGAAC+AGG | 0.465185 | 3_1:+80729416 | Msa0379540:three_prime_UTR |
| CCAGCTGAAAATGGGACAAT+TGG | 0.466279 | 3_1:-80727406 | None:intergenic |
| AATGATGAGAATGTTGAAAT+GGG | 0.468069 | 3_1:+80726052 | Msa0379540:CDS |
| CGCGCCTTGGCCCTCTCATA+GGG | 0.469964 | 3_1:+80729317 | Msa0379540:three_prime_UTR |
| AGCTGATCATGCTCTGAAGT+TGG | 0.470813 | 3_1:+80725655 | Msa0379540:CDS |
| GCCACGTAGAAGTGGGAGAT+AGG | 0.471094 | 3_1:-80725759 | None:intergenic |
| AGTGGGCTCTTGAACTAAAA+GGG | 0.471204 | 3_1:-80729520 | Msa0379550:CDS |
| CTAACAAGCTTGGTGAAGCT+TGG | 0.471247 | 3_1:+80726307 | Msa0379540:CDS |
| CAGAAGAATCTTCAGAGAAT+GGG | 0.472581 | 3_1:+80726345 | Msa0379540:CDS |
| ACTCACGTTACTAGGGTTCT+GGG | 0.475091 | 3_1:-80729567 | Msa0379550:CDS |
| CTGAATATTTGGAGAAATGT+GGG | 0.476542 | 3_1:+80726635 | Msa0379540:CDS |
| GGATAACTAGGGGTACCTTT+CGG | 0.478712 | 3_1:-80725907 | None:intergenic |
| GAAGGAGGAAAAGCTGCAAT+TGG | 0.478844 | 3_1:+80727536 | Msa0379540:three_prime_UTR |
| GCGGCTGTGGGAAGCCAGTA+AGG | 0.479826 | 3_1:+80726243 | Msa0379540:CDS |
| TGCGAAGAGAAGAAGTATAT+GGG | 0.480978 | 3_1:-80724704 | None:intergenic |
| GTATCACGGCGGTGAGAGAT+TGG | 0.481133 | 3_1:-80724644 | None:intergenic |
| GTTGTAAGACAGAACATTCA+AGG | 0.484662 | 3_1:-80725954 | None:intergenic |
| GAGGGAAGGCGCTACTTTGG+AGG | 0.487384 | 3_1:-80728832 | Msa0379550:CDS |
| GCTTTGCTGATATTGCTGTT+GGG | 0.489214 | 3_1:-80728798 | Msa0379550:CDS |
| CAAGAGCCCACTTGACCCTC+AGG | 0.492284 | 3_1:+80729531 | Msa0379540:three_prime_UTR |
| CTATGTTGAAAGACTGCCAT+TGG | 0.497964 | 3_1:+80726581 | Msa0379540:CDS |
| CCACTTCTACGTGGCTATGT+AGG | 0.500824 | 3_1:+80725767 | Msa0379540:CDS |
| GTTTAACCATTTACATTTAG+CGG | 0.503561 | 3_1:+80724549 | Msa0379540:five_prime_UTR |
| ATACGCCTCTTTGAAGCAAA+AGG | 0.504517 | 3_1:+80726210 | Msa0379540:CDS |
| ATATGTCAATTGGCAAAAGA+TGG | 0.504962 | 3_1:+80726525 | Msa0379540:CDS |
| ACGTGGGAAATTCTCATTGA+AGG | 0.506864 | 3_1:+80726502 | Msa0379540:CDS |
| TTCTTTGTGGCGGCCTCCAA+TGG | 0.509216 | 3_1:-80726597 | None:intergenic |
| GCCAATGTGTATATGAAAGC+AGG | 0.509662 | 3_1:+80726097 | Msa0379540:CDS |
| ATGGCTAATACAATTCTTTG+TGG | 0.512455 | 3_1:-80726610 | None:intergenic |
| CTTCAAAATTGGGTCGATCA+AGG | 0.514502 | 3_1:+80724864 | Msa0379540:CDS |
| ACACGTTGAATCTGCCGTGA+AGG | 0.517519 | 3_1:+80724586 | Msa0379540:five_prime_UTR |
| TTTCTCCAAATATTCAGCTA+TGG | 0.517860 | 3_1:-80726629 | None:intergenic |
| TCTGCCGTGAAGGGCTTCAT+CGG | 0.518815 | 3_1:+80724596 | Msa0379540:five_prime_UTR |
| ATGCGTATACCTGACTCAGC+TGG | 0.523390 | 3_1:+80725725 | Msa0379540:CDS |
| GGGTAGTCCATTTGTCCTGA+GGG | 0.524592 | 3_1:-80729546 | Msa0379550:CDS |
| CCATTCTTAAAGGCTTCACT+GGG | 0.526110 | 3_1:+80726827 | Msa0379540:CDS |
| GCGATATGGGGTTGCAGCAG+TGG | 0.527736 | 3_1:+80726006 | Msa0379540:CDS |
| GTCGCCGATGAAGCCCTTCA+CGG | 0.527747 | 3_1:-80724600 | None:intergenic |
| GCTGAATATTTGGAGAAATG+TGG | 0.530476 | 3_1:+80726634 | Msa0379540:CDS |
| CCTGATTGATACAGAGTCCA+TGG | 0.533258 | 3_1:-80728728 | Msa0379550:CDS |
| GTAGAATCTGGAAAAGAAGA+TGG | 0.534042 | 3_1:+80727500 | Msa0379540:three_prime_UTR |
| CACACAGGTATTCAACTGGA+TGG | 0.535536 | 3_1:+80725604 | Msa0379540:intron |
| AATTTGAAGATCCTTGAAAG+TGG | 0.535582 | 3_1:-80728859 | Msa0379550:CDS |
| TGGATGAGTGCTTGTGATGA+GGG | 0.538983 | 3_1:+80725980 | Msa0379540:CDS |
| ACGCTACAATCACGCATTCG+AGG | 0.542785 | 3_1:+80724944 | Msa0379540:CDS |
| GGGGTAGTCCATTTGTCCTG+AGG | 0.544193 | 3_1:-80729547 | Msa0379550:CDS |
| GTATAATCCTGTTTATAAGA+AGG | 0.544339 | 3_1:-80729441 | Msa0379550:CDS |
| TACGTGGCTATGTAGGAGAT+AGG | 0.544359 | 3_1:+80725774 | Msa0379540:CDS |
| CTCTCACCGCCGTGATACGA+CGG | 0.545445 | 3_1:+80724649 | Msa0379540:CDS |
| TTTAGCCCAAAATCGCGCCT+TGG | 0.545817 | 3_1:+80729304 | Msa0379540:three_prime_UTR |
| AAGAAAGTCATCGAAGTAAG+TGG | 0.546614 | 3_1:+80728696 | Msa0379540:three_prime_UTR |
| CACGTTGAATCTGCCGTGAA+GGG | 0.546834 | 3_1:+80724587 | Msa0379540:five_prime_UTR |
| TGGTTCGCCATCTGAAGCTA+CGG | 0.548716 | 3_1:-80724624 | None:intergenic |
| CAATAAAGACAAAATGGAGA+TGG | 0.549030 | 3_1:+80726789 | Msa0379540:CDS |
| CATTTGTCCTGAGGGTCAAG+TGG | 0.551709 | 3_1:-80729538 | Msa0379550:CDS |
| AGGTAACAAGCTTTCATCAT+CGG | 0.555005 | 3_1:+80724884 | Msa0379540:CDS |
| TGTTGAAAGACTGCCATTGG+AGG | 0.555843 | 3_1:+80726584 | Msa0379540:CDS |
| TATTTGCATACTAACAAGCT+TGG | 0.557592 | 3_1:+80726297 | Msa0379540:CDS |
| ATGAGAATGTTGAAATGGGA+TGG | 0.563565 | 3_1:+80726056 | Msa0379540:CDS |
| CATTTAGCGGCAAATTTCTG+TGG | 0.565338 | 3_1:+80724562 | Msa0379540:five_prime_UTR |
| TCCTGCTTTCATATACACAT+TGG | 0.565526 | 3_1:-80726098 | None:intergenic |
| TTAGGAGCATATGTGCGGAA+TGG | 0.567056 | 3_1:+80726412 | Msa0379540:CDS |
| AACTAGGAATGAGAAAGAGC+AGG | 0.568013 | 3_1:-80729623 | Msa0379550:five_prime_UTR |
| GCATCTCCACACATTGCAGA+AGG | 0.568052 | 3_1:+80726459 | Msa0379540:CDS |
| ATGGAGAAGCTCTATGAACT+GGG | 0.568445 | 3_1:+80725821 | Msa0379540:CDS |
| CTGTCTACATGTAATCGTCT+TGG | 0.569357 | 3_1:+80726166 | Msa0379540:CDS |
| CAAGTTATCAACGCAAGCAA+GGG | 0.570969 | 3_1:+80724524 | Msa0379540:five_prime_UTR |
| CATGATCAGCTGGGTTTATG+CGG | 0.572059 | 3_1:-80725643 | None:intergenic |
| ATTTGTCCTGAGGGTCAAGT+GGG | 0.573803 | 3_1:-80729537 | Msa0379550:CDS |
| CGTGTCGTACCGTCGTATCA+CGG | 0.574617 | 3_1:-80724658 | None:intergenic |
| GCCCTCTCATAGGGATCATG+TGG | 0.575393 | 3_1:+80729326 | Msa0379540:three_prime_UTR |
| GAAGCCAGTAAGGCAGTTGG+TGG | 0.575582 | 3_1:+80726253 | Msa0379540:CDS |
| TAGGGATCATGTGGAAGAAG+AGG | 0.575719 | 3_1:+80729335 | Msa0379540:three_prime_UTR |
| GCTCTATGAACTGGGGCTAG+TGG | 0.575872 | 3_1:+80725829 | Msa0379540:CDS |
| ACAAGTTATCAACGCAAGCA+AGG | 0.578248 | 3_1:+80724523 | Msa0379540:five_prime_UTR |
| CGCCTCTTTGAAGCAAAAGG+AGG | 0.583122 | 3_1:+80726213 | Msa0379540:CDS |
| GAGACTCACTCACGTTACTA+GGG | 0.583299 | 3_1:-80729574 | Msa0379550:CDS |
| TTGGATGAGTGCTTGTGATG+AGG | 0.583463 | 3_1:+80725979 | Msa0379540:CDS |
| CCTACATAGCCACGTAGAAG+TGG | 0.584375 | 3_1:-80725767 | None:intergenic |
| ACTTCAGAGCATGATCAGCT+GGG | 0.585003 | 3_1:-80725652 | None:intergenic |
| GATCCTTGAAAGTGGACTTG+AGG | 0.587591 | 3_1:-80728851 | Msa0379550:CDS |
| GTAAGTGGTAAGTTTAGCCA+TGG | 0.594981 | 3_1:+80728711 | Msa0379540:three_prime_UTR |
| AACTGAGATGCATCTCCAGA+AGG | 0.596914 | 3_1:+80724907 | Msa0379540:CDS |
| ACGTGGCTATGTAGGAGATA+GGG | 0.597576 | 3_1:+80725775 | Msa0379540:CDS |
| GGAGGGAGTCTTGCGGCTGT+GGG | 0.599301 | 3_1:+80726231 | Msa0379540:CDS |
| AATAGGAGAGGAACAACAGA+AGG | 0.601970 | 3_1:-80728902 | Msa0379550:CDS |
| CATCACAAGCACTCATCCAA+AGG | 0.605501 | 3_1:-80725976 | None:intergenic |
| TTTATTTGTTGGATAACTAG+GGG | 0.607266 | 3_1:-80725917 | None:intergenic |
| GGCGACGCCGTAGCTTCAGA+TGG | 0.607322 | 3_1:+80724617 | Msa0379540:exon |
| GCTAATACAATTCTTTGTGG+CGG | 0.610024 | 3_1:-80726607 | None:intergenic |
| AGCCACCCTTCTGCAATGTG+TGG | 0.612657 | 3_1:-80726465 | None:intergenic |
| GCCTCTTTGAAGCAAAAGGA+GGG | 0.615558 | 3_1:+80726214 | Msa0379540:CDS |
| TCCACATGATCCCTATGAGA+GGG | 0.621697 | 3_1:-80729327 | Msa0379550:CDS |
| GTTCAAGCTGAAGTGTTTGG+AGG | 0.622053 | 3_1:+80726940 | Msa0379540:three_prime_UTR |
| GATGGTCACCAACCAACTGA+AGG | 0.622078 | 3_1:+80727518 | Msa0379540:three_prime_UTR |
| ATGAAGATGTCAAGACCTTG+TGG | 0.622264 | 3_1:+80728608 | Msa0379540:three_prime_UTR |
| AACAAGCTTGGTGAAGCTTG+GGG | 0.626479 | 3_1:+80726309 | Msa0379540:CDS |
| TGGGAAGCCAGTAAGGCAGT+TGG | 0.629575 | 3_1:+80726250 | Msa0379540:CDS |
| CATCTCCACACATTGCAGAA+GGG | 0.629974 | 3_1:+80726460 | Msa0379540:CDS |
| GTGGGCTCTTGAACTAAAAG+GGG | 0.630143 | 3_1:-80729519 | Msa0379550:CDS |
| TTCCACATGATCCCTATGAG+AGG | 0.630417 | 3_1:-80729328 | Msa0379550:CDS |
| CTCCACACATTGCAGAAGGG+TGG | 0.631048 | 3_1:+80726463 | Msa0379540:CDS |
| TTGTAAGACAGAACATTCAA+GGG | 0.631305 | 3_1:-80725953 | None:intergenic |
| CTACATAGCCACGTAGAAGT+GGG | 0.632992 | 3_1:-80725766 | None:intergenic |
| GGTCACCAACCAACTGAAGG+AGG | 0.633472 | 3_1:+80727521 | Msa0379540:three_prime_UTR |
| TTGAAAGTGGACTTGAGGGA+AGG | 0.636293 | 3_1:-80728846 | Msa0379550:CDS |
| GCTGTCCAAACTACAAGACG+TGG | 0.636885 | 3_1:+80726485 | Msa0379540:CDS |
| TACCTTTCGGTACTCACATG+TGG | 0.641449 | 3_1:-80725894 | None:intergenic |
| GCACAGCAAGGCCTTCCACA+AGG | 0.644456 | 3_1:-80728623 | Msa0379550:CDS |
| AGATGTCAAGACCTTGTGGA+AGG | 0.645290 | 3_1:+80728612 | Msa0379540:three_prime_UTR |
| CTCACGTTACTAGGGTTCTG+GGG | 0.648274 | 3_1:-80729566 | Msa0379550:CDS |
| TCAAGTAACTTATCATGAGA+CGG | 0.652385 | 3_1:+80728646 | Msa0379540:three_prime_UTR |
| TGATCCCTATGAGAGGGCCA+AGG | 0.658261 | 3_1:-80729321 | Msa0379550:CDS |
| CAATTGGCAAAAGATGGATG+AGG | 0.660417 | 3_1:+80726531 | Msa0379540:CDS |
| ACGTAGAAGTGGGAGATAGG+CGG | 0.666086 | 3_1:-80725756 | None:intergenic |
| AAGGTGGTTCTTGAGCAGAA+AGG | 0.666643 | 3_1:-80726747 | None:intergenic |
| GCGAAGAGAAGAAGTATATG+GGG | 0.666763 | 3_1:-80724703 | None:intergenic |
| AGCAAAAGGAGGGAGTCTTG+CGG | 0.669308 | 3_1:+80726224 | Msa0379540:CDS |
| TAAGTTACTTGAGCACAGCA+AGG | 0.675812 | 3_1:-80728635 | Msa0379550:CDS |
| TGCCACATGTGAGTACCGAA+AGG | 0.679332 | 3_1:+80725892 | Msa0379540:CDS |
| GTACCTGTTCTTGTGCATGA+CGG | 0.690851 | 3_1:-80729419 | Msa0379550:CDS |
| GCCTATCTCCCACTTCTACG+TGG | 0.702332 | 3_1:+80725758 | Msa0379540:CDS |
| TGGAGAAGCTCTATGAACTG+GGG | 0.707353 | 3_1:+80725822 | Msa0379540:CDS |
| CGAGTGATAGAAGAAACTGT+AGG | 0.708991 | 3_1:-80728757 | Msa0379550:CDS |
| CTGTCCAAACTACAAGACGT+GGG | 0.720216 | 3_1:+80726486 | Msa0379540:CDS |
| TGATGAGGGAGAGCGATATG+GGG | 0.743042 | 3_1:+80725994 | Msa0379540:CDS |
| GTCGTACCGTCGTATCACGG+CGG | 0.782153 | 3_1:-80724655 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTTATTAATTCAGTA+CGG | + | chr3_1:80727281-80727300 | Msa0379540:intron | 10.0% |
| !!! | ATATTTATTTTCCTTTTACA+TGG | + | chr3_1:80728189-80728208 | Msa0379540:intron | 15.0% |
| !!! | TATTTATTTTCCTTTTACAT+GGG | + | chr3_1:80728190-80728209 | Msa0379540:intron | 15.0% |
| !!! | TATATTATTTTCCTTTATCA+TGG | + | chr3_1:80728246-80728265 | Msa0379540:intron | 15.0% |
| !! | ATAGAATACTATAATATCAA+GGG | - | chr3_1:80728285-80728304 | Msa0379550:three_prime_UTR | 15.0% |
| !! | TTGATATTATAGTATTCTAT+GGG | + | chr3_1:80728285-80728304 | Msa0379540:intron | 15.0% |
| !!! | CTTGTAAAAGTAATTTTAAT+GGG | - | chr3_1:80728342-80728361 | Msa0379550:three_prime_UTR | 15.0% |
| !!! | TCTTGTAAAAGTAATTTTAA+TGG | - | chr3_1:80728343-80728362 | Msa0379550:three_prime_UTR | 15.0% |
| !! | TATAACATATTGTATTGTAT+AGG | + | chr3_1:80728563-80728582 | Msa0379540:intron | 15.0% |
| !!! | TGATGATGTACTTTTTATTT+TGG | + | chr3_1:80725290-80725309 | Msa0379540:intron | 20.0% |
| !! | GTTTCATCATTTCATTATAA+GGG | - | chr3_1:80725865-80725884 | None:intergenic | 20.0% |
| !! | AGTTTCATCATTTCATTATA+AGG | - | chr3_1:80725866-80725885 | None:intergenic | 20.0% |
| !!! | TTTTATTTGTTGGATAACTA+GGG | - | chr3_1:80725921-80725940 | None:intergenic | 20.0% |
| !!! | CTTTATTTCGTTTTATTTGT+TGG | - | chr3_1:80725931-80725950 | None:intergenic | 20.0% |
| !! | ATCACAGATATTCATAATTT+AGG | + | chr3_1:80726682-80726701 | Msa0379540:CDS | 20.0% |
| !!! | TGTCTTTATTGATCATTTTA+AGG | - | chr3_1:80726780-80726799 | None:intergenic | 20.0% |
| !! | AATGATCAATAAAGACAAAA+TGG | + | chr3_1:80726783-80726802 | Msa0379540:CDS | 20.0% |
| !! | ATCTAATCCATTAGAATTTA+TGG | + | chr3_1:80726858-80726877 | Msa0379540:three_prime_UTR | 20.0% |
| !! | AAATATTCACTTCATGAAAA+AGG | - | chr3_1:80726989-80727008 | None:intergenic | 20.0% |
| !!! | TTTCTATGATTTTGAAAACT+GGG | - | chr3_1:80727250-80727269 | None:intergenic | 20.0% |
| !! | GTTAACAATAACATAAATCT+TGG | + | chr3_1:80727303-80727322 | Msa0379540:intron | 20.0% |
| !! | TAAAAAAGAATGTTAGGAAT+AGG | - | chr3_1:80727382-80727401 | None:intergenic | 20.0% |
| !!! | TGAATTTAATGAAGTTTTGA+AGG | + | chr3_1:80727824-80727843 | Msa0379540:intron | 20.0% |
| !! | CATAGAATACTATAATATCA+AGG | - | chr3_1:80728286-80728305 | Msa0379550:three_prime_UTR | 20.0% |
| !! | CTTGATATTATAGTATTCTA+TGG | + | chr3_1:80728284-80728303 | Msa0379540:intron | 20.0% |
| !! | TGATATTATAGTATTCTATG+GGG | + | chr3_1:80728286-80728305 | Msa0379540:intron | 20.0% |
| !! | ATTAACATATTGCATGATAT+TGG | + | chr3_1:80728481-80728500 | Msa0379540:intron | 20.0% |
| !!! | CTTTTGAGTAATAGTTTAAT+TGG | + | chr3_1:80729108-80729127 | Msa0379540:intron | 20.0% |
| !!! | AATATGTTGAAGAAGATTTT+AGG | - | chr3_1:80729490-80729509 | Msa0379550:CDS | 20.0% |
| !! | TAAAATCTTCTTCAACATAT+TGG | + | chr3_1:80729489-80729508 | Msa0379540:three_prime_UTR | 20.0% |
| !! | TGTTTGATTAAAAGCAAAAA+TGG | - | chr3_1:80729603-80729622 | Msa0379550:exon | 20.0% |
| ! | GTTTAACCATTTACATTTAG+CGG | + | chr3_1:80724549-80724568 | Msa0379540:five_prime_UTR | 25.0% |
| !!! | AGTTCTAAAGTAGTTAATTG+TGG | + | chr3_1:80725018-80725037 | Msa0379540:intron | 25.0% |
| ! | AGTAGTAAATGAAAATGACA+AGG | + | chr3_1:80725115-80725134 | Msa0379540:intron | 25.0% |
| ! | GTAGTAAATGAAAATGACAA+GGG | + | chr3_1:80725116-80725135 | Msa0379540:intron | 25.0% |
| !!! | ATTTAGTTTGTTGCTTATGT+TGG | + | chr3_1:80725220-80725239 | Msa0379540:intron | 25.0% |
| !!! | TGTTTAGCTTATGCTTTTAT+AGG | + | chr3_1:80725248-80725267 | Msa0379540:intron | 25.0% |
| !!! | TGATGTACTTTTTATTTTGG+AGG | + | chr3_1:80725293-80725312 | Msa0379540:intron | 25.0% |
| ! | TGTTATTGCAATGTGATTTA+TGG | + | chr3_1:80725521-80725540 | Msa0379540:intron | 25.0% |
| ! | GTTATTGCAATGTGATTTAT+GGG | + | chr3_1:80725522-80725541 | Msa0379540:intron | 25.0% |
| !! | TTAATTATTCTTTTGCACAC+AGG | + | chr3_1:80725589-80725608 | Msa0379540:intron | 25.0% |
| !! | TTTATTTGTTGGATAACTAG+GGG | - | chr3_1:80725920-80725939 | None:intergenic | 25.0% |
| !!! | GTTTTATTTGTTGGATAACT+AGG | - | chr3_1:80725922-80725941 | None:intergenic | 25.0% |
| ! | AAATGATGAGAATGTTGAAA+TGG | + | chr3_1:80726051-80726070 | Msa0379540:CDS | 25.0% |
| ! | AATGATGAGAATGTTGAAAT+GGG | + | chr3_1:80726052-80726071 | Msa0379540:CDS | 25.0% |
| ! | TGTTAGTATGCAAATATAGT+TGG | - | chr3_1:80726293-80726312 | None:intergenic | 25.0% |
| ! | GATATTCATAATTTAGGTCT+TGG | + | chr3_1:80726688-80726707 | Msa0379540:CDS | 25.0% |
| !!! | TATTGATCATTTTAAGGACA+TGG | - | chr3_1:80726774-80726793 | None:intergenic | 25.0% |
| !!! | CTGCTAGTCTTTATAAAAAT+GGG | - | chr3_1:80727130-80727149 | None:intergenic | 25.0% |
| !! | ATTTTTCTGTGTAGTTAAGA+AGG | + | chr3_1:80727181-80727200 | Msa0379540:intron | 25.0% |
| !!! | GTTTCTATGATTTTGAAAAC+TGG | - | chr3_1:80727251-80727270 | None:intergenic | 25.0% |
| ! | AATCAACAAAGATAAAGAAG+TGG | - | chr3_1:80727353-80727372 | None:intergenic | 25.0% |
| ! | ACTTCTTTATCTTTGTTGAT+TGG | + | chr3_1:80727352-80727371 | Msa0379540:intron | 25.0% |
| ! | GAAGACAGAGTATAAATTAA+TGG | + | chr3_1:80727455-80727474 | Msa0379540:three_prime_UTR | 25.0% |
| ! | TTTGGTATATTTGTAGAATC+TGG | + | chr3_1:80727488-80727507 | Msa0379540:three_prime_UTR | 25.0% |
| ! | AAAATAGACGAGTAAACAAA+AGG | - | chr3_1:80727590-80727609 | None:intergenic | 25.0% |
| ! | AACATATAGAGTATGTTTAG+TGG | - | chr3_1:80727977-80727996 | None:intergenic | 25.0% |
| ! | CTAAATCATAAATGACTCTT+GGG | - | chr3_1:80728154-80728173 | None:intergenic | 25.0% |
| ! | ACTAAATCATAAATGACTCT+TGG | - | chr3_1:80728155-80728174 | None:intergenic | 25.0% |
| ! | TCATTTATGATTTAGTGAGA+AGG | + | chr3_1:80728159-80728178 | Msa0379540:intron | 25.0% |
| ! | TAATGATTCTTCCATGATAA+AGG | - | chr3_1:80728260-80728279 | None:intergenic | 25.0% |
| ! | TAACGTCTTGATTAAATAAG+CGG | + | chr3_1:80728313-80728332 | Msa0379540:intron | 25.0% |
| !!! | TGTGTTTACATGATTAGTTT+AGG | + | chr3_1:80728387-80728406 | Msa0379540:intron | 25.0% |
| !!! | ATAGCTACCTTTTTCAAAAT+AGG | - | chr3_1:80728922-80728941 | Msa0379550:CDS | 25.0% |
| ! | GTATAATCCTGTTTATAAGA+AGG | - | chr3_1:80729444-80729463 | Msa0379550:CDS | 25.0% |
| AATTTGCCGCTAAATGTAAA+TGG | - | chr3_1:80724558-80724577 | None:intergenic | 30.0% | |
| !! | ATTACTAGCTTTAGCCATAT+AGG | + | chr3_1:80725044-80725063 | Msa0379540:intron | 30.0% |
| !! | TTACTAGCTTTAGCCATATA+GGG | + | chr3_1:80725045-80725064 | Msa0379540:intron | 30.0% |
| ACAGAAATTCAACAGAGAAA+TGG | - | chr3_1:80725155-80725174 | None:intergenic | 30.0% | |
| ATTTCCAAAAAACCTTCAAG+CGG | - | chr3_1:80725190-80725209 | None:intergenic | 30.0% | |
| GCTATAGTGAAGTGATTATA+AGG | - | chr3_1:80725397-80725416 | None:intergenic | 30.0% | |
| AAGCTGTAATCAATCCATAA+TGG | - | chr3_1:80725451-80725470 | None:intergenic | 30.0% | |
| AAGATACTGTAACTGATCAT+CGG | + | chr3_1:80725476-80725495 | Msa0379540:intron | 30.0% | |
| AGTTAATCGCTAAAAACTGT+GGG | + | chr3_1:80725678-80725697 | Msa0379540:CDS | 30.0% | |
| TTGTAAGACAGAACATTCAA+GGG | - | chr3_1:80725956-80725975 | None:intergenic | 30.0% | |
| !!! | GGCATTTTTTAGAACTAGAA+TGG | - | chr3_1:80726137-80726156 | None:intergenic | 30.0% |
| TATTTGCATACTAACAAGCT+TGG | + | chr3_1:80726297-80726316 | Msa0379540:CDS | 30.0% | |
| ! | AGAGTCTCTAATGTTCTTTT+AGG | + | chr3_1:80726394-80726413 | Msa0379540:CDS | 30.0% |
| TCATTGAAGGATATGTCAAT+TGG | + | chr3_1:80726515-80726534 | Msa0379540:CDS | 30.0% | |
| ATATGTCAATTGGCAAAAGA+TGG | + | chr3_1:80726525-80726544 | Msa0379540:CDS | 30.0% | |
| ATGGCTAATACAATTCTTTG+TGG | - | chr3_1:80726613-80726632 | None:intergenic | 30.0% | |
| ATTAGCCATAGCTGAATATT+TGG | + | chr3_1:80726624-80726643 | Msa0379540:CDS | 30.0% | |
| TTTCTCCAAATATTCAGCTA+TGG | - | chr3_1:80726632-80726651 | None:intergenic | 30.0% | |
| CTGAATATTTGGAGAAATGT+GGG | + | chr3_1:80726635-80726654 | Msa0379540:CDS | 30.0% | |
| !! | ATCATTTTAAGGACATGGAA+AGG | - | chr3_1:80726769-80726788 | None:intergenic | 30.0% |
| CAATAAAGACAAAATGGAGA+TGG | + | chr3_1:80726789-80726808 | Msa0379540:CDS | 30.0% | |
| GAGCAATCCATAAATTCTAA+TGG | - | chr3_1:80726868-80726887 | None:intergenic | 30.0% | |
| TGTAAACAACACGTGTATTA+GGG | - | chr3_1:80726919-80726938 | None:intergenic | 30.0% | |
| ATGTAAACAACACGTGTATT+AGG | - | chr3_1:80726920-80726939 | None:intergenic | 30.0% | |
| ! | TATGTGATAATGTTGCACTT+TGG | - | chr3_1:80727083-80727102 | None:intergenic | 30.0% |
| !! | GCTGCTAGTCTTTATAAAAA+TGG | - | chr3_1:80727131-80727150 | None:intergenic | 30.0% |
| !!! | TGGTGATTTTAGTTGAATAG+TGG | + | chr3_1:80727323-80727342 | Msa0379540:intron | 30.0% |
| GGCTGATAAAAAAGAATGTT+AGG | - | chr3_1:80727388-80727407 | None:intergenic | 30.0% | |
| ! | ATTAATGGCTATCAAGCTTT+TGG | + | chr3_1:80727470-80727489 | Msa0379540:three_prime_UTR | 30.0% |
| !! | ACGAGTAAACAAAAGGTATT+GGG | - | chr3_1:80727583-80727602 | None:intergenic | 30.0% |
| TAGGTGAAAAATTCAAACCT+CGG | + | chr3_1:80727793-80727812 | Msa0379540:intron | 30.0% | |
| TTAAATTCAAAACTGTACCG+AGG | - | chr3_1:80727813-80727832 | None:intergenic | 30.0% | |
| AACATAAAGGCTAATAGACA+TGG | - | chr3_1:80728054-80728073 | None:intergenic | 30.0% | |
| TATTCTATCTCCCATGTAAA+AGG | - | chr3_1:80728203-80728222 | None:intergenic | 30.0% | |
| GATGTGTGTGTATGATATAT+GGG | - | chr3_1:80728516-80728535 | Msa0379550:three_prime_UTR | 30.0% | |
| TGATGTGTGTGTATGATATA+TGG | - | chr3_1:80728517-80728536 | Msa0379550:three_prime_UTR | 30.0% | |
| CATATTGTATTGTATAGGTG+TGG | + | chr3_1:80728568-80728587 | Msa0379540:intron | 30.0% | |
| TCAAGTAACTTATCATGAGA+CGG | + | chr3_1:80728646-80728665 | Msa0379540:three_prime_UTR | 30.0% | |
| ! | TACTTTGGAGGTGAAAATAT+AGG | - | chr3_1:80728823-80728842 | Msa0379550:CDS | 30.0% |
| AATTTGAAGATCCTTGAAAG+TGG | - | chr3_1:80728862-80728881 | Msa0379550:CDS | 30.0% | |
| !! | TTCCTCTCCTATTTTGAAAA+AGG | + | chr3_1:80728912-80728931 | Msa0379540:three_prime_UTR | 30.0% |
| !!! | TACCTTTTTCAAAATAGGAG+AGG | - | chr3_1:80728917-80728936 | Msa0379550:CDS | 30.0% |
| AAAAAGGTAGCTATAAATGC+TGG | + | chr3_1:80728928-80728947 | Msa0379540:three_prime_UTR | 30.0% | |
| !!! | AAGGTTGGTTTTTGTATTAG+AGG | + | chr3_1:80728968-80728987 | Msa0379540:intron | 30.0% |
| ! | ATCATGTTCTTTAGAAGTCA+TGG | + | chr3_1:80729257-80729276 | Msa0379540:intron | 30.0% |
| ! | TGGCTTTTATACCTTATCAT+CGG | + | chr3_1:80729277-80729296 | Msa0379540:intron | 30.0% |
| AATCACTAGTGATTCTGATA+TGG | + | chr3_1:80729391-80729410 | Msa0379540:three_prime_UTR | 30.0% | |
| TGATTAAAAGCAAAAATGGC+AGG | - | chr3_1:80729599-80729618 | Msa0379550:exon | 30.0% | |
| ! | TGCGAAGAGAAGAAGTATAT+GGG | - | chr3_1:80724707-80724726 | None:intergenic | 35.0% |
| ! | AGCAGCATCAGTTTCTTTTT+GGG | + | chr3_1:80724726-80724745 | Msa0379540:CDS | 35.0% |
| ATTGCCAGTGCTTCAAAATT+GGG | + | chr3_1:80724854-80724873 | Msa0379540:CDS | 35.0% | |
| AGGTAACAAGCTTTCATCAT+CGG | + | chr3_1:80724884-80724903 | Msa0379540:CDS | 35.0% | |
| TTACATTCCTGCAATTTGTG+TGG | + | chr3_1:80724990-80725009 | Msa0379540:intron | 35.0% | |
| CTTTAGCCATATAGGGTTTA+GGG | + | chr3_1:80725052-80725071 | Msa0379540:intron | 35.0% | |
| CATAAACCCTAAACCCTATA+TGG | - | chr3_1:80725061-80725080 | None:intergenic | 35.0% | |
| TTTCCAAAAAACCTTCAAGC+GGG | - | chr3_1:80725189-80725208 | None:intergenic | 35.0% | |
| ! | CACTTCACTATAGCATTTTG+TGG | + | chr3_1:80725403-80725422 | Msa0379540:intron | 35.0% |
| !! | TTTTGTGGATTAATCGCTTC+AGG | + | chr3_1:80725418-80725437 | Msa0379540:intron | 35.0% |
| ! | GGTTTATGCGGAATTTTTGT+TGG | - | chr3_1:80725634-80725653 | None:intergenic | 35.0% |
| GAGTTAATCGCTAAAAACTG+TGG | + | chr3_1:80725677-80725696 | Msa0379540:CDS | 35.0% | |
| GTTGTAAGACAGAACATTCA+AGG | - | chr3_1:80725957-80725976 | None:intergenic | 35.0% | |
| ATGTTCTGTCTTACAACCTT+TGG | + | chr3_1:80725960-80725979 | Msa0379540:CDS | 35.0% | |
| ATGAGAATGTTGAAATGGGA+TGG | + | chr3_1:80726056-80726075 | Msa0379540:CDS | 35.0% | |
| TCCTGCTTTCATATACACAT+TGG | - | chr3_1:80726101-80726120 | None:intergenic | 35.0% | |
| ACATGTAGACAGTTTCTCTT+CGG | - | chr3_1:80726158-80726177 | None:intergenic | 35.0% | |
| CAGAAGAATCTTCAGAGAAT+GGG | + | chr3_1:80726345-80726364 | Msa0379540:CDS | 35.0% | |
| !! | TTCTTTTAGGAGCATATGTG+CGG | + | chr3_1:80726407-80726426 | Msa0379540:CDS | 35.0% |
| TATTGCCATGAAAAGAGCTT+TGG | + | chr3_1:80726558-80726577 | Msa0379540:CDS | 35.0% | |
| GCTAATACAATTCTTTGTGG+CGG | - | chr3_1:80726610-80726629 | None:intergenic | 35.0% | |
| GCTGAATATTTGGAGAAATG+TGG | + | chr3_1:80726634-80726653 | Msa0379540:CDS | 35.0% | |
| !! | ATTTTAAGGACATGGAAAGG+TGG | - | chr3_1:80726766-80726785 | None:intergenic | 35.0% |
| GAGACTGTTTCCATTCTTAA+AGG | + | chr3_1:80726817-80726836 | Msa0379540:CDS | 35.0% | |
| !! | CTATGATTTTGAAAACTGGG+AGG | - | chr3_1:80727247-80727266 | None:intergenic | 35.0% |
| ATCATTGACCAGCTGAAAAT+GGG | - | chr3_1:80727417-80727436 | None:intergenic | 35.0% | |
| AATCATTGACCAGCTGAAAA+TGG | - | chr3_1:80727418-80727437 | None:intergenic | 35.0% | |
| GTAGAATCTGGAAAAGAAGA+TGG | + | chr3_1:80727500-80727519 | Msa0379540:three_prime_UTR | 35.0% | |
| !! | CGAGTAAACAAAAGGTATTG+GGG | - | chr3_1:80727582-80727601 | None:intergenic | 35.0% |
| ! | GACGAGTAAACAAAAGGTAT+TGG | - | chr3_1:80727584-80727603 | None:intergenic | 35.0% |
| TATACTTTCCCAGGTTAACA+GGG | - | chr3_1:80727658-80727677 | None:intergenic | 35.0% | |
| ATATACTTTCCCAGGTTAAC+AGG | - | chr3_1:80727659-80727678 | None:intergenic | 35.0% | |
| ! | TGTTAACCTGGGAAAGTATA+TGG | + | chr3_1:80727658-80727677 | Msa0379540:intron | 35.0% |
| ! | GTTAACCTGGGAAAGTATAT+GGG | + | chr3_1:80727659-80727678 | Msa0379540:intron | 35.0% |
| ATATTCCCATATACTTTCCC+AGG | - | chr3_1:80727667-80727686 | None:intergenic | 35.0% | |
| GAGTATCTAGTCATCTAACA+CGG | - | chr3_1:80727755-80727774 | None:intergenic | 35.0% | |
| TATAGCTAGCAATGAAGGTA+TGG | - | chr3_1:80727937-80727956 | None:intergenic | 35.0% | |
| GAAGAGGAAACGAAACATAA+AGG | - | chr3_1:80728067-80728086 | None:intergenic | 35.0% | |
| CATAAATGACTCTTGGGATA+AGG | - | chr3_1:80728148-80728167 | None:intergenic | 35.0% | |
| ! | ATTAGTTTAGGTTTGAGCTC+AGG | + | chr3_1:80728399-80728418 | Msa0379540:intron | 35.0% |
| TGTGTGTATGATAATATGCG+TGG | - | chr3_1:80728446-80728465 | Msa0379550:three_prime_UTR | 35.0% | |
| AAGAAAGTCATCGAAGTAAG+TGG | + | chr3_1:80728696-80728715 | Msa0379540:three_prime_UTR | 35.0% | |
| !!! | TGTTGGGTTTTTTGGATTCT+GGG | - | chr3_1:80728785-80728804 | Msa0379550:CDS | 35.0% |
| !!! | GATATTGCTGTTGGGTTTTT+TGG | - | chr3_1:80728793-80728812 | Msa0379550:CDS | 35.0% |
| CACACTGAAATAGAAAAGGT+TGG | + | chr3_1:80728953-80728972 | Msa0379540:intron | 35.0% | |
| !! | TTGGTTTTTGTATTAGAGGC+TGG | + | chr3_1:80728972-80728991 | Msa0379540:intron | 35.0% |
| GATCAAACCAAACATCAAGT+TGG | + | chr3_1:80729201-80729220 | Msa0379540:intron | 35.0% | |
| ! | TAGAGTATGTTGATGAGATC+TGG | - | chr3_1:80729370-80729389 | Msa0379550:CDS | 35.0% |
| ACAGGTACCTTCTTATAAAC+AGG | + | chr3_1:80729434-80729453 | Msa0379540:three_prime_UTR | 35.0% | |
| ACAAGTTATCAACGCAAGCA+AGG | + | chr3_1:80724523-80724542 | Msa0379540:five_prime_UTR | 40.0% | |
| CAAGTTATCAACGCAAGCAA+GGG | + | chr3_1:80724524-80724543 | Msa0379540:five_prime_UTR | 40.0% | |
| CATTTAGCGGCAAATTTCTG+TGG | + | chr3_1:80724562-80724581 | Msa0379540:five_prime_UTR | 40.0% | |
| ! | GCGAAGAGAAGAAGTATATG+GGG | - | chr3_1:80724706-80724725 | None:intergenic | 40.0% |
| ! | CTGCGAAGAGAAGAAGTATA+TGG | - | chr3_1:80724708-80724727 | None:intergenic | 40.0% |
| ! | CAGCAGCATCAGTTTCTTTT+TGG | + | chr3_1:80724725-80724744 | Msa0379540:CDS | 40.0% |
| !!! | CAATTTTGAAGCACTGGCAA+TGG | - | chr3_1:80724855-80724874 | None:intergenic | 40.0% |
| CATTGCCAGTGCTTCAAAAT+TGG | + | chr3_1:80724853-80724872 | Msa0379540:CDS | 40.0% | |
| CTTCAAAATTGGGTCGATCA+AGG | + | chr3_1:80724864-80724883 | Msa0379540:CDS | 40.0% | |
| TTTGGATTTGATGAGCCTTC+TGG | - | chr3_1:80724925-80724944 | None:intergenic | 40.0% | |
| GCTTTAGCCATATAGGGTTT+AGG | + | chr3_1:80725051-80725070 | Msa0379540:intron | 40.0% | |
| ! | ATTTTCCTTTTCCCGCTTGA+AGG | + | chr3_1:80725175-80725194 | Msa0379540:intron | 40.0% |
| AAAAACCTTCAAGCGGGAAA+AGG | - | chr3_1:80725183-80725202 | None:intergenic | 40.0% | |
| !!! | TTTCCCGCTTGAAGGTTTTT+TGG | + | chr3_1:80725183-80725202 | Msa0379540:intron | 40.0% |
| GCTCAATACGCTGAACTTAA+AGG | - | chr3_1:80725346-80725365 | None:intergenic | 40.0% | |
| ! | CTTCAGGCTACTTTCCATTA+TGG | + | chr3_1:80725434-80725453 | Msa0379540:intron | 40.0% |
| TTTGCACACAGGTATTCAAC+TGG | + | chr3_1:80725600-80725619 | Msa0379540:intron | 40.0% | |
| ATGGAGAAGCTCTATGAACT+GGG | + | chr3_1:80725821-80725840 | Msa0379540:CDS | 40.0% | |
| GCCAATGTGTATATGAAAGC+AGG | + | chr3_1:80726097-80726116 | Msa0379540:CDS | 40.0% | |
| CTGTCTACATGTAATCGTCT+TGG | + | chr3_1:80726166-80726185 | Msa0379540:CDS | 40.0% | |
| !! | ATACGCCTCTTTGAAGCAAA+AGG | + | chr3_1:80726210-80726229 | Msa0379540:CDS | 40.0% |
| ! | TAACAAGCTTGGTGAAGCTT+GGG | + | chr3_1:80726308-80726327 | Msa0379540:CDS | 40.0% |
| ! | CCATTCTCTGAAGATTCTTC+TGG | - | chr3_1:80726347-80726366 | None:intergenic | 40.0% |
| CCAGAAGAATCTTCAGAGAA+TGG | + | chr3_1:80726344-80726363 | Msa0379540:CDS | 40.0% | |
| ATTTCCCACGTCTTGTAGTT+TGG | - | chr3_1:80726493-80726512 | None:intergenic | 40.0% | |
| ACGTGGGAAATTCTCATTGA+AGG | + | chr3_1:80726502-80726521 | Msa0379540:CDS | 40.0% | |
| CAATTGGCAAAAGATGGATG+AGG | + | chr3_1:80726531-80726550 | Msa0379540:CDS | 40.0% | |
| ! | CATAGCCAAAGCTCTTTTCA+TGG | - | chr3_1:80726566-80726585 | None:intergenic | 40.0% |
| CTATGTTGAAAGACTGCCAT+TGG | + | chr3_1:80726581-80726600 | Msa0379540:CDS | 40.0% | |
| TCCATTCTTAAAGGCTTCAC+TGG | + | chr3_1:80726826-80726845 | Msa0379540:CDS | 40.0% | |
| CCATTCTTAAAGGCTTCACT+GGG | + | chr3_1:80726827-80726846 | Msa0379540:CDS | 40.0% | |
| ! | CATGTTCAAGCTGAAGTGTT+TGG | + | chr3_1:80726937-80726956 | Msa0379540:three_prime_UTR | 40.0% |
| TATCATCATGTTCTCACGGA+TGG | - | chr3_1:80727634-80727653 | None:intergenic | 40.0% | |
| GGGTTATCATCATGTTCTCA+CGG | - | chr3_1:80727638-80727657 | None:intergenic | 40.0% | |
| TGATGATAACCCTGTTAACC+TGG | + | chr3_1:80727646-80727665 | Msa0379540:intron | 40.0% | |
| GATGATAACCCTGTTAACCT+GGG | + | chr3_1:80727647-80727666 | Msa0379540:intron | 40.0% | |
| CATTCTCCATTTAGATTGCC+AGG | + | chr3_1:80727726-80727745 | Msa0379540:intron | 40.0% | |
| ! | CATAAGGGCAGTTTTCTAAC+AGG | - | chr3_1:80727885-80727904 | None:intergenic | 40.0% |
| TCATCGCTACATCAGCATAA+GGG | - | chr3_1:80727900-80727919 | None:intergenic | 40.0% | |
| ATCATCGCTACATCAGCATA+AGG | - | chr3_1:80727901-80727920 | None:intergenic | 40.0% | |
| TTATGCTGATGTAGCGATGA+TGG | + | chr3_1:80727900-80727919 | Msa0379540:intron | 40.0% | |
| CGTGATATAGCTAGCAATGA+AGG | - | chr3_1:80727942-80727961 | None:intergenic | 40.0% | |
| ACATCGCAATTCAACTGAAG+AGG | - | chr3_1:80728083-80728102 | None:intergenic | 40.0% | |
| ! | ATACTCTTCAGCCTTATCCA+AGG | + | chr3_1:80728113-80728132 | Msa0379540:intron | 40.0% |
| GACATCTTCATCAGCTTAAG+AGG | - | chr3_1:80728599-80728618 | Msa0379550:exon | 40.0% | |
| ATGAAGATGTCAAGACCTTG+TGG | + | chr3_1:80728608-80728627 | Msa0379540:three_prime_UTR | 40.0% | |
| TAAGTTACTTGAGCACAGCA+AGG | - | chr3_1:80728638-80728657 | Msa0379550:CDS | 40.0% | |
| GTAAGTGGTAAGTTTAGCCA+TGG | + | chr3_1:80728711-80728730 | Msa0379540:three_prime_UTR | 40.0% | |
| CGAGTGATAGAAGAAACTGT+AGG | - | chr3_1:80728760-80728779 | Msa0379550:CDS | 40.0% | |
| !!! | CTGTTGGGTTTTTTGGATTC+TGG | - | chr3_1:80728786-80728805 | Msa0379550:CDS | 40.0% |
| ! | GCTTTGCTGATATTGCTGTT+GGG | - | chr3_1:80728801-80728820 | Msa0379550:CDS | 40.0% |
| ! | ATCCTTGAAAGTGGACTTGA+GGG | - | chr3_1:80728853-80728872 | Msa0379550:CDS | 40.0% |
| AATAGGAGAGGAACAACAGA+AGG | - | chr3_1:80728905-80728924 | Msa0379550:CDS | 40.0% | |
| GGCACACACTGAAATAGAAA+AGG | + | chr3_1:80728949-80728968 | Msa0379540:intron | 40.0% | |
| AGTCTCAACATTTCGATCTC+TGG | - | chr3_1:80729090-80729109 | Msa0379550:intron | 40.0% | |
| CCAGAAACCAACTTGATGTT+TGG | - | chr3_1:80729211-80729230 | Msa0379550:intron | 40.0% | |
| !! | CCAAACATCAAGTTGGTTTC+TGG | + | chr3_1:80729208-80729227 | Msa0379540:intron | 40.0% |
| GTTCAACCATTTGAACCAGA+CGG | + | chr3_1:80729230-80729249 | Msa0379540:intron | 40.0% | |
| ! | ATCAAACCGTCTGGTTCAAA+TGG | - | chr3_1:80729239-80729258 | Msa0379550:intron | 40.0% |
| AAGAACATGATCAAACCGTC+TGG | - | chr3_1:80729248-80729267 | Msa0379550:intron | 40.0% | |
| ! | AGTGGGCTCTTGAACTAAAA+GGG | - | chr3_1:80729523-80729542 | Msa0379550:CDS | 40.0% |
| ! | AAGTGGGCTCTTGAACTAAA+AGG | - | chr3_1:80729524-80729543 | Msa0379550:CDS | 40.0% |
| AACTAGGAATGAGAAAGAGC+AGG | - | chr3_1:80729626-80729645 | Msa0379550:five_prime_UTR | 40.0% | |
| !!! | TCGACCCAATTTTGAAGCAC+TGG | - | chr3_1:80724861-80724880 | None:intergenic | 45.0% |
| AACTGAGATGCATCTCCAGA+AGG | + | chr3_1:80724907-80724926 | Msa0379540:CDS | 45.0% | |
| GAATGCGTGATTGTAGCGTT+TGG | - | chr3_1:80724943-80724962 | None:intergenic | 45.0% | |
| ACAATCACGCATTCGAGGTT+CGG | + | chr3_1:80724949-80724968 | Msa0379540:intron | 45.0% | |
| CTTCGAACCACACAAATTGC+AGG | - | chr3_1:80725000-80725019 | None:intergenic | 45.0% | |
| CACACAGGTATTCAACTGGA+TGG | + | chr3_1:80725604-80725623 | Msa0379540:intron | 45.0% | |
| CATGATCAGCTGGGTTTATG+CGG | - | chr3_1:80725646-80725665 | None:intergenic | 45.0% | |
| ACTTCAGAGCATGATCAGCT+GGG | - | chr3_1:80725655-80725674 | None:intergenic | 45.0% | |
| AACTTCAGAGCATGATCAGC+TGG | - | chr3_1:80725656-80725675 | None:intergenic | 45.0% | |
| !! | AGCTGATCATGCTCTGAAGT+TGG | + | chr3_1:80725655-80725674 | Msa0379540:CDS | 45.0% |
| ! | CGCTAAAAACTGTGGGCTAA+TGG | + | chr3_1:80725685-80725704 | Msa0379540:CDS | 45.0% |
| CTACATAGCCACGTAGAAGT+GGG | - | chr3_1:80725769-80725788 | None:intergenic | 45.0% | |
| TACGTGGCTATGTAGGAGAT+AGG | + | chr3_1:80725774-80725793 | Msa0379540:CDS | 45.0% | |
| ACGTGGCTATGTAGGAGATA+GGG | + | chr3_1:80725775-80725794 | Msa0379540:CDS | 45.0% | |
| CATGAACGTCTCAGCTTTAC+TGG | - | chr3_1:80725804-80725823 | None:intergenic | 45.0% | |
| CAGTAAAGCTGAGACGTTCA+TGG | + | chr3_1:80725802-80725821 | Msa0379540:CDS | 45.0% | |
| CATGGAGAAGCTCTATGAAC+TGG | + | chr3_1:80725820-80725839 | Msa0379540:CDS | 45.0% | |
| TGGAGAAGCTCTATGAACTG+GGG | + | chr3_1:80725822-80725841 | Msa0379540:CDS | 45.0% | |
| TACCTTTCGGTACTCACATG+TGG | - | chr3_1:80725897-80725916 | None:intergenic | 45.0% | |
| !! | GGATAACTAGGGGTACCTTT+CGG | - | chr3_1:80725910-80725929 | None:intergenic | 45.0% |
| CATCACAAGCACTCATCCAA+AGG | - | chr3_1:80725979-80725998 | None:intergenic | 45.0% | |
| TTGGATGAGTGCTTGTGATG+AGG | + | chr3_1:80725979-80725998 | Msa0379540:CDS | 45.0% | |
| TGGATGAGTGCTTGTGATGA+GGG | + | chr3_1:80725980-80725999 | Msa0379540:CDS | 45.0% | |
| !! | GCCTCTTTGAAGCAAAAGGA+GGG | + | chr3_1:80726214-80726233 | Msa0379540:CDS | 45.0% |
| ! | TCCCTCCTTTTGCTTCAAAG+AGG | - | chr3_1:80726218-80726237 | None:intergenic | 45.0% |
| ! | CTAACAAGCTTGGTGAAGCT+TGG | + | chr3_1:80726307-80726326 | Msa0379540:CDS | 45.0% |
| ! | AACAAGCTTGGTGAAGCTTG+GGG | + | chr3_1:80726309-80726328 | Msa0379540:CDS | 45.0% |
| ! | TTAGGAGCATATGTGCGGAA+TGG | + | chr3_1:80726412-80726431 | Msa0379540:CDS | 45.0% |
| CATCTCCACACATTGCAGAA+GGG | + | chr3_1:80726460-80726479 | Msa0379540:CDS | 45.0% | |
| CTGTCCAAACTACAAGACGT+GGG | + | chr3_1:80726486-80726505 | Msa0379540:CDS | 45.0% | |
| TGTTGAAAGACTGCCATTGG+AGG | + | chr3_1:80726584-80726603 | Msa0379540:CDS | 45.0% | |
| AAGGTGGTTCTTGAGCAGAA+AGG | - | chr3_1:80726750-80726769 | None:intergenic | 45.0% | |
| ! | CCCAGTGAAGCCTTTAAGAA+TGG | - | chr3_1:80726830-80726849 | None:intergenic | 45.0% |
| CTTAAAGGCTTCACTGGGTA+AGG | + | chr3_1:80726832-80726851 | Msa0379540:CDS | 45.0% | |
| ! | GTTCAAGCTGAAGTGTTTGG+AGG | + | chr3_1:80726940-80726959 | Msa0379540:three_prime_UTR | 45.0% |
| CCAGCTGAAAATGGGACAAT+TGG | - | chr3_1:80727409-80727428 | None:intergenic | 45.0% | |
| ! | CCAATTGTCCCATTTTCAGC+TGG | + | chr3_1:80727406-80727425 | Msa0379540:three_prime_UTR | 45.0% |
| ! | CTTTTCCTCCTTCAGTTGGT+TGG | - | chr3_1:80727529-80727548 | None:intergenic | 45.0% |
| GAAGGAGGAAAAGCTGCAAT+TGG | + | chr3_1:80727536-80727555 | Msa0379540:three_prime_UTR | 45.0% | |
| ATACTCTCTACGCTGTCAAG+AGG | + | chr3_1:80727769-80727788 | Msa0379540:intron | 45.0% | |
| TACTCTCTACGCTGTCAAGA+GGG | + | chr3_1:80727770-80727789 | Msa0379540:intron | 45.0% | |
| GAGCTCAGGTTCGTGTTTAT+AGG | + | chr3_1:80728413-80728432 | Msa0379540:intron | 45.0% | |
| AGATGTCAAGACCTTGTGGA+AGG | + | chr3_1:80728612-80728631 | Msa0379540:three_prime_UTR | 45.0% | |
| ! | GGCGTGCATTCTTTGATAAC+AGG | + | chr3_1:80728667-80728686 | Msa0379540:three_prime_UTR | 45.0% |
| CCTGATTGATACAGAGTCCA+TGG | - | chr3_1:80728731-80728750 | Msa0379550:CDS | 45.0% | |
| CCATGGACTCTGTATCAATC+AGG | + | chr3_1:80728728-80728747 | Msa0379540:three_prime_UTR | 45.0% | |
| GGCTTTGCTGATATTGCTGT+TGG | - | chr3_1:80728802-80728821 | Msa0379550:CDS | 45.0% | |
| ! | TTGAAAGTGGACTTGAGGGA+AGG | - | chr3_1:80728849-80728868 | Msa0379550:CDS | 45.0% |
| TTCCCTCAAGTCCACTTTCA+AGG | + | chr3_1:80728848-80728867 | Msa0379540:three_prime_UTR | 45.0% | |
| ! | GATCCTTGAAAGTGGACTTG+AGG | - | chr3_1:80728854-80728873 | Msa0379550:CDS | 45.0% |
| GGCTAAATTCGCCGATGATA+AGG | - | chr3_1:80729291-80729310 | Msa0379550:CDS | 45.0% | |
| TCCACATGATCCCTATGAGA+GGG | - | chr3_1:80729330-80729349 | Msa0379550:CDS | 45.0% | |
| TTCCACATGATCCCTATGAG+AGG | - | chr3_1:80729331-80729350 | Msa0379550:CDS | 45.0% | |
| TAGGGATCATGTGGAAGAAG+AGG | + | chr3_1:80729335-80729354 | Msa0379540:three_prime_UTR | 45.0% | |
| TTACCGTCATGCACAAGAAC+AGG | + | chr3_1:80729416-80729435 | Msa0379540:three_prime_UTR | 45.0% | |
| GTACCTGTTCTTGTGCATGA+CGG | - | chr3_1:80729422-80729441 | Msa0379550:CDS | 45.0% | |
| GTGGGCTCTTGAACTAAAAG+GGG | - | chr3_1:80729522-80729541 | Msa0379550:CDS | 45.0% | |
| ATTTGTCCTGAGGGTCAAGT+GGG | - | chr3_1:80729540-80729559 | Msa0379550:CDS | 45.0% | |
| ACTCACGTTACTAGGGTTCT+GGG | - | chr3_1:80729570-80729589 | Msa0379550:CDS | 45.0% | |
| GAGACTCACTCACGTTACTA+GGG | - | chr3_1:80729577-80729596 | Msa0379550:CDS | 45.0% | |
| ACACGTTGAATCTGCCGTGA+AGG | + | chr3_1:80724586-80724605 | Msa0379540:five_prime_UTR | 50.0% | |
| CACGTTGAATCTGCCGTGAA+GGG | + | chr3_1:80724587-80724606 | Msa0379540:five_prime_UTR | 50.0% | |
| ! | TGGTTCGCCATCTGAAGCTA+CGG | - | chr3_1:80724627-80724646 | None:intergenic | 50.0% |
| GGCAATGGAGTTTGCGTTGA+AGG | - | chr3_1:80724840-80724859 | None:intergenic | 50.0% | |
| ACGCTACAATCACGCATTCG+AGG | + | chr3_1:80724944-80724963 | Msa0379540:CDS | 50.0% | |
| ATGCGTATACCTGACTCAGC+TGG | + | chr3_1:80725725-80725744 | Msa0379540:CDS | 50.0% | |
| GCTTTCTTTCCAGCTGAGTC+AGG | - | chr3_1:80725737-80725756 | None:intergenic | 50.0% | |
| ACGTAGAAGTGGGAGATAGG+CGG | - | chr3_1:80725759-80725778 | None:intergenic | 50.0% | |
| CCTACATAGCCACGTAGAAG+TGG | - | chr3_1:80725770-80725789 | None:intergenic | 50.0% | |
| CCACTTCTACGTGGCTATGT+AGG | + | chr3_1:80725767-80725786 | Msa0379540:CDS | 50.0% | |
| !! | TGCCACATGTGAGTACCGAA+AGG | + | chr3_1:80725892-80725911 | Msa0379540:CDS | 50.0% |
| TGTGATGAGGGAGAGCGATA+TGG | + | chr3_1:80725992-80726011 | Msa0379540:CDS | 50.0% | |
| GTGATGAGGGAGAGCGATAT+GGG | + | chr3_1:80725993-80726012 | Msa0379540:CDS | 50.0% | |
| TGATGAGGGAGAGCGATATG+GGG | + | chr3_1:80725994-80726013 | Msa0379540:CDS | 50.0% | |
| !! | CGCCTCTTTGAAGCAAAAGG+AGG | + | chr3_1:80726213-80726232 | Msa0379540:CDS | 50.0% |
| AGCAAAAGGAGGGAGTCTTG+CGG | + | chr3_1:80726224-80726243 | Msa0379540:CDS | 50.0% | |
| TCTTCCACCAACTGCCTTAC+TGG | - | chr3_1:80726260-80726279 | None:intergenic | 50.0% | |
| GCATCTCCACACATTGCAGA+AGG | + | chr3_1:80726459-80726478 | Msa0379540:CDS | 50.0% | |
| GCTGTCCAAACTACAAGACG+TGG | + | chr3_1:80726485-80726504 | Msa0379540:CDS | 50.0% | |
| GATGGTCACCAACCAACTGA+AGG | + | chr3_1:80727518-80727537 | Msa0379540:three_prime_UTR | 50.0% | |
| ! | GCAGCTTTTCCTCCTTCAGT+TGG | - | chr3_1:80727533-80727552 | None:intergenic | 50.0% |
| CGGCAACCTGGCAATCTAAA+TGG | - | chr3_1:80727735-80727754 | None:intergenic | 50.0% | |
| AGTCATCTAACACGGCAACC+TGG | - | chr3_1:80727747-80727766 | None:intergenic | 50.0% | |
| ! | CTCTTCAGCCTTATCCAAGG+AGG | + | chr3_1:80728116-80728135 | Msa0379540:intron | 50.0% |
| GGATGTAGCCTCCTTGGATA+AGG | - | chr3_1:80728127-80728146 | None:intergenic | 50.0% | |
| GGATAAGGATGTAGCCTCCT+TGG | - | chr3_1:80728133-80728152 | None:intergenic | 50.0% | |
| TTTAGCCCAAAATCGCGCCT+TGG | + | chr3_1:80729304-80729323 | Msa0379540:three_prime_UTR | 50.0% | |
| CATTTGTCCTGAGGGTCAAG+TGG | - | chr3_1:80729541-80729560 | Msa0379550:CDS | 50.0% | |
| CACTTGACCCTCAGGACAAA+TGG | + | chr3_1:80729539-80729558 | Msa0379540:three_prime_UTR | 50.0% | |
| GGGTAGTCCATTTGTCCTGA+GGG | - | chr3_1:80729549-80729568 | Msa0379550:CDS | 50.0% | |
| CTCACGTTACTAGGGTTCTG+GGG | - | chr3_1:80729569-80729588 | Msa0379550:CDS | 50.0% | |
| CACTCACGTTACTAGGGTTC+TGG | - | chr3_1:80729571-80729590 | Msa0379550:CDS | 50.0% | |
| GGAGACTCACTCACGTTACT+AGG | - | chr3_1:80729578-80729597 | Msa0379550:CDS | 50.0% | |
| TCTGCCGTGAAGGGCTTCAT+CGG | + | chr3_1:80724596-80724615 | Msa0379540:five_prime_UTR | 55.0% | |
| GTATCACGGCGGTGAGAGAT+TGG | - | chr3_1:80724647-80724666 | None:intergenic | 55.0% | |
| CGTGTCGTACCGTCGTATCA+CGG | - | chr3_1:80724661-80724680 | None:intergenic | 55.0% | |
| GCCTATCTCCCACTTCTACG+TGG | + | chr3_1:80725758-80725777 | Msa0379540:CDS | 55.0% | |
| GCCACGTAGAAGTGGGAGAT+AGG | - | chr3_1:80725762-80725781 | None:intergenic | 55.0% | |
| GCTCTATGAACTGGGGCTAG+TGG | + | chr3_1:80725829-80725848 | Msa0379540:CDS | 55.0% | |
| TGGGAAGCCAGTAAGGCAGT+TGG | + | chr3_1:80726250-80726269 | Msa0379540:CDS | 55.0% | |
| GAAGCCAGTAAGGCAGTTGG+TGG | + | chr3_1:80726253-80726272 | Msa0379540:CDS | 55.0% | |
| CTCCACACATTGCAGAAGGG+TGG | + | chr3_1:80726463-80726482 | Msa0379540:CDS | 55.0% | |
| AGCCACCCTTCTGCAATGTG+TGG | - | chr3_1:80726468-80726487 | None:intergenic | 55.0% | |
| TTCTTTGTGGCGGCCTCCAA+TGG | - | chr3_1:80726600-80726619 | None:intergenic | 55.0% | |
| GGTCACCAACCAACTGAAGG+AGG | + | chr3_1:80727521-80727540 | Msa0379540:three_prime_UTR | 55.0% | |
| CTCTACGCTGTCAAGAGGGT+AGG | + | chr3_1:80727774-80727793 | Msa0379540:intron | 55.0% | |
| !! | CTTGAGGGAAGGCGCTACTT+TGG | - | chr3_1:80728838-80728857 | Msa0379550:CDS | 55.0% |
| TGATCCCTATGAGAGGGCCA+AGG | - | chr3_1:80729324-80729343 | Msa0379550:CDS | 55.0% | |
| GCCCTCTCATAGGGATCATG+TGG | + | chr3_1:80729326-80729345 | Msa0379540:three_prime_UTR | 55.0% | |
| GGGGTAGTCCATTTGTCCTG+AGG | - | chr3_1:80729550-80729569 | Msa0379550:CDS | 55.0% | |
| GTCGCCGATGAAGCCCTTCA+CGG | - | chr3_1:80724603-80724622 | None:intergenic | 60.0% | |
| CTCTCACCGCCGTGATACGA+CGG | + | chr3_1:80724649-80724668 | Msa0379540:CDS | 60.0% | |
| GTCGTACCGTCGTATCACGG+CGG | - | chr3_1:80724658-80724677 | None:intergenic | 60.0% | |
| GCGATATGGGGTTGCAGCAG+TGG | + | chr3_1:80726006-80726025 | Msa0379540:CDS | 60.0% | |
| GCACAGCAAGGCCTTCCACA+AGG | - | chr3_1:80728626-80728645 | Msa0379550:CDS | 60.0% | |
| !! | GAGGGAAGGCGCTACTTTGG+AGG | - | chr3_1:80728835-80728854 | Msa0379550:CDS | 60.0% |
| ! | GAGGGCCAAGGCGCGATTTT+GGG | - | chr3_1:80729312-80729331 | Msa0379550:CDS | 60.0% |
| ! | AGAGGGCCAAGGCGCGATTT+TGG | - | chr3_1:80729313-80729332 | Msa0379550:CDS | 60.0% |
| CAAGAGCCCACTTGACCCTC+AGG | + | chr3_1:80729531-80729550 | Msa0379540:three_prime_UTR | 60.0% | |
| GGCGACGCCGTAGCTTCAGA+TGG | + | chr3_1:80724617-80724636 | Msa0379540:exon | 65.0% | |
| AGGAGGGAGTCTTGCGGCTG+TGG | + | chr3_1:80726230-80726249 | Msa0379540:CDS | 65.0% | |
| GGAGGGAGTCTTGCGGCTGT+GGG | + | chr3_1:80726231-80726250 | Msa0379540:CDS | 65.0% | |
| GCGGCTGTGGGAAGCCAGTA+AGG | + | chr3_1:80726243-80726262 | Msa0379540:CDS | 65.0% | |
| TCGCGCCTTGGCCCTCTCAT+AGG | + | chr3_1:80729316-80729335 | Msa0379540:three_prime_UTR | 65.0% | |
| CGCGCCTTGGCCCTCTCATA+GGG | + | chr3_1:80729317-80729336 | Msa0379540:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 80724510 | 80729659 | 80724510 | ID=Msa0379540;Name=Msa0379540 |
| chr3_1 | mRNA | 80724510 | 80729659 | 80724510 | ID=Msa0379540-mRNA-1;Parent=Msa0379540;Name=Msa0379540-mRNA-1;_AED=0.07;_eAED=0.07;_QI=126|1|1|1|0.25|0.2|5|1041|523 |
| chr3_1 | exon | 80724510 | 80724965 | 80724510 | ID=Msa0379540-mRNA-1:exon:20203;Parent=Msa0379540-mRNA-1 |
| chr3_1 | exon | 80725611 | 80726998 | 80725611 | ID=Msa0379540-mRNA-1:exon:20204;Parent=Msa0379540-mRNA-1 |
| chr3_1 | exon | 80727406 | 80727557 | 80727406 | ID=Msa0379540-mRNA-1:exon:20205;Parent=Msa0379540-mRNA-1 |
| chr3_1 | exon | 80728585 | 80728956 | 80728585 | ID=Msa0379540-mRNA-1:exon:20206;Parent=Msa0379540-mRNA-1 |
| chr3_1 | exon | 80729289 | 80729659 | 80729289 | ID=Msa0379540-mRNA-1:exon:20207;Parent=Msa0379540-mRNA-1 |
| chr3_1 | five_prime_UTR | 80724510 | 80724635 | 80724510 | ID=Msa0379540-mRNA-1:five_prime_utr;Parent=Msa0379540-mRNA-1 |
| chr3_1 | CDS | 80724636 | 80724965 | 80724636 | ID=Msa0379540-mRNA-1:cds;Parent=Msa0379540-mRNA-1 |
| chr3_1 | CDS | 80725611 | 80726852 | 80725611 | ID=Msa0379540-mRNA-1:cds;Parent=Msa0379540-mRNA-1 |
| chr3_1 | three_prime_UTR | 80726853 | 80726998 | 80726853 | ID=Msa0379540-mRNA-1:three_prime_utr;Parent=Msa0379540-mRNA-1 |
| chr3_1 | three_prime_UTR | 80727406 | 80727557 | 80727406 | ID=Msa0379540-mRNA-1:three_prime_utr;Parent=Msa0379540-mRNA-1 |
| chr3_1 | three_prime_UTR | 80728585 | 80728956 | 80728585 | ID=Msa0379540-mRNA-1:three_prime_utr;Parent=Msa0379540-mRNA-1 |
| chr3_1 | three_prime_UTR | 80729289 | 80729659 | 80729289 | ID=Msa0379540-mRNA-1:three_prime_utr;Parent=Msa0379540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
