AlfalfaGEDB | Msa0092670

M. sativa cultivar zhongmu-4 / Msa0092670

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0092670	A0A072VQY7	95.092	163	5	1	1	163	1	160	1.57e-102	300

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0016670	Msa0092670	-0.814659	1.376750e-51	-8.615850e-47
Msa0032920	Msa0092670	0.839141	1.892709e-57	-8.615850e-47
Msa0032960	Msa0092670	0.809785	1.593329e-50	-8.615850e-47
Msa0039250	Msa0092670	-0.804688	1.915304e-49	-8.615850e-47
Msa0043670	Msa0092670	0.949594	9.274994e-108	-8.615850e-47
Msa0073670	Msa0092670	-0.826320	2.894672e-54	-8.615850e-47
Msa0077200	Msa0092670	-0.824593	7.421516e-54	-8.615850e-47
Msa0081520	Msa0092670	-0.800029	1.745515e-48	-8.615850e-47
Msa0092670	Msa0092690	0.986633	1.908621e-167	-8.615850e-47
Msa0092670	Msa0092740	0.959210	3.426889e-117	-8.615850e-47
Msa0092670	Msa0094130	-0.801134	1.038979e-48	-8.615850e-47
Msa0092670	Msa0124990	-0.822252	2.617045e-53	-8.615850e-47
Msa0092670	Msa0130240	-0.832348	9.951183e-56	-8.615850e-47
Msa0092670	Msa0133720	-0.800094	1.693338e-48	-8.615850e-47
Msa0092670	Msa0134180	-0.838754	2.382538e-57	-8.615850e-47
Msa0092670	Msa0134610	-0.812027	5.211102e-51	-8.615850e-47
Msa0092670	Msa0137610	0.946943	1.753661e-105	-8.615850e-47
Msa0092670	Msa0138920	-0.806216	9.160661e-50	-8.615850e-47
Msa0092670	Msa0146280	-0.817195	3.739368e-52	-8.615850e-47
Msa0092670	Msa0173890	-0.805364	1.383662e-49	-8.615850e-47
Msa0092670	Msa0180930	-0.813271	2.785371e-51	-8.615850e-47
Msa0092670	Msa0182620	0.877057	8.526250e-69	-8.615850e-47
Msa0092670	Msa0186890	-0.831349	1.755232e-55	-8.615850e-47
Msa0092670	Msa0188690	-0.825934	3.574875e-54	-8.615850e-47
Msa0092670	Msa0205840	-0.835724	1.420768e-56	-8.615850e-47
Msa0092670	Msa0225180	-0.800474	1.416865e-48	-8.615850e-47
Msa0092670	Msa0225750	-0.800701	1.273817e-48	-8.615850e-47
Msa0092670	Msa0239450	-0.820674	6.055678e-53	-8.615850e-47
Msa0092670	Msa0248970	-0.808099	3.656882e-50	-8.615850e-47
Msa0092670	Msa0274680	-0.818488	1.909214e-52	-8.615850e-47
Msa0092670	Msa0277180	-0.802975	4.347400e-49	-8.615850e-47
Msa0092670	Msa0292400	-0.801316	9.536641e-49	-8.615850e-47
Msa0092670	Msa0307850	-0.842055	3.265514e-58	-8.615850e-47
Msa0092670	Msa0316810	-0.814011	1.913929e-51	-8.615850e-47
Msa0092670	Msa0317280	-0.804093	2.548629e-49	-8.615850e-47
Msa0092670	Msa0413450	-0.807936	3.962583e-50	-8.615850e-47
Msa0092670	Msa0417880	-0.819197	1.317647e-52	-8.615850e-47
Msa0092670	Msa0422850	-0.805432	1.339053e-49	-8.615850e-47
Msa0092670	Msa0422930	-0.803285	3.749141e-49	-8.615850e-47
Msa0092670	Msa0434920	-0.807351	5.274088e-50	-8.615850e-47
Msa0092670	Msa0475790	-0.824277	8.808802e-54	-8.615850e-47
Msa0092670	Msa0478870	-0.807146	5.829669e-50	-8.615850e-47
Msa0092670	Msa0527550	-0.822469	2.329716e-53	-8.615850e-47
Msa0092670	Msa0527860	-0.802212	6.244272e-49	-8.615850e-47
Msa0092670	Msa0541860	-0.833785	4.367486e-56	-8.615850e-47
Msa0092670	Msa0546300	-0.808603	2.855463e-50	-8.615850e-47
Msa0092670	Msa0552810	-0.818584	1.816014e-52	-8.615850e-47
Msa0092670	Msa0560470	-0.810050	1.397588e-50	-8.615850e-47
Msa0092670	Msa0574890	-0.810504	1.115300e-50	-8.615850e-47
Msa0092670	Msa0581070	-0.821565	3.772985e-53	-8.615850e-47
Msa0092670	Msa0586190	-0.800564	1.358463e-48	-8.615850e-47
Msa0092670	Msa0620990	-0.830834	2.349469e-55	-8.615850e-47
Msa0092670	Msa0642720	-0.817459	3.261898e-52	-8.615850e-47
Msa0092670	Msa0654870	-0.801506	8.720401e-49	-8.615850e-47
Msa0092670	Msa0659030	-0.806011	1.011896e-49	-8.615850e-47
Msa0092670	Msa0663300	-0.814346	1.614082e-51	-8.615850e-47
Msa0092670	Msa0664060	-0.805418	1.347583e-49	-8.615850e-47
Msa0092670	Msa0683570	-0.812719	3.679914e-51	-8.615850e-47
Msa0092670	Msa0692080	-0.814866	1.238664e-51	-8.615850e-47
Msa0092670	Msa0702340	-0.821946	3.081482e-53	-8.615850e-47
Msa0092670	Msa0702590	-0.822554	2.226408e-53	-8.615850e-47
Msa0092670	Msa0702660	-0.822075	2.875434e-53	-8.615850e-47
Msa0092670	Msa0703230	-0.828245	1.000572e-54	-8.615850e-47
Msa0092670	Msa0705000	-0.807569	4.741603e-50	-8.615850e-47
Msa0092670	Msa0705040	-0.813588	2.372631e-51	-8.615850e-47
Msa0092670	Msa0734960	-0.805898	1.068959e-49	-8.615850e-47
Msa0092670	Msa0788770	-0.826282	2.954427e-54	-8.615850e-47
Msa0092670	Msa0790400	-0.837917	3.917200e-57	-8.615850e-47
Msa0092670	Msa0824640	-0.805407	1.354786e-49	-8.615850e-47
Msa0092670	Msa0856050	-0.823950	1.050728e-53	-8.615850e-47
Msa0092670	Msa0861510	-0.810071	1.382824e-50	-8.615850e-47
Msa0092670	Msa0861600	-0.804651	1.950429e-49	-8.615850e-47
Msa0092670	Msa0864010	-0.813408	2.598753e-51	-8.615850e-47
Msa0092670	Msa0930780	-0.834363	3.130879e-56	-8.615850e-47
Msa0092670	Msa0948250	-0.812289	4.570094e-51	-8.615850e-47
Msa0092670	Msa0968670	-0.815196	1.046238e-51	-8.615850e-47
Msa0092670	Msa0986920	-0.815643	8.321072e-52	-8.615850e-47
Msa0092670	Msa1004420	-0.814423	1.552237e-51	-8.615850e-47
Msa0092670	Msa1005820	-0.806012	1.011554e-49	-8.615850e-47
Msa0092670	Msa1048920	-0.804213	2.406025e-49	-8.615850e-47
Msa0092670	Msa1091520	-0.818936	1.511204e-52	-8.615850e-47
Msa0092670	Msa1097640	-0.809196	2.132393e-50	-8.615850e-47
Msa0092670	Msa1126510	-0.812120	4.974482e-51	-8.615850e-47
Msa0092670	Msa1126770	-0.828349	9.446466e-55	-8.615850e-47
Msa0092670	Msa1127890	-0.811712	6.103732e-51	-8.615850e-47
Msa0092670	Msa1139810	-0.805455	1.324082e-49	-8.615850e-47
Msa0092670	Msa1143650	-0.823447	1.378547e-53	-8.615850e-47
Msa0092670	Msa1159760	-0.809391	1.936708e-50	-8.615850e-47
Msa0092670	Msa1173330	-0.811819	5.783664e-51	-8.615850e-47
Msa0092670	Msa1174100	-0.808689	2.737331e-50	-8.615850e-47
Msa0092670	Msa1174530	-0.819133	1.362762e-52	-8.615850e-47
Msa0092670	Msa1184370	-0.810209	1.291592e-50	-8.615850e-47
Msa0092670	Msa1201830	-0.800054	1.725077e-48	-8.615850e-47
Msa0092670	Msa1224840	-0.827185	1.798937e-54	-8.615850e-47
Msa0092670	Msa1227690	-0.825935	3.572413e-54	-8.615850e-47
Msa0092670	Msa1228890	-0.821399	4.122268e-53	-8.615850e-47
Msa0092670	Msa1232710	-0.827721	1.337617e-54	-8.615850e-47
Msa0092670	Msa1235250	-0.813768	2.165634e-51	-8.615850e-47
Msa0092670	Msa1252190	-0.850739	1.397527e-60	-8.615850e-47
Msa0092670	Msa1254710	-0.800574	1.352064e-48	-8.615850e-47
Msa0092670	Msa1258710	-0.819066	1.411432e-52	-8.615850e-47
Msa0092670	Msa1264710	-0.823562	1.295489e-53	-8.615850e-47
Msa0092670	Msa1274060	-0.826152	3.173018e-54	-8.615850e-47
Msa0092670	Msa1274280	-0.837136	6.210971e-57	-8.615850e-47
Msa0092670	Msa1280560	-0.813835	2.093202e-51	-8.615850e-47
Msa0092670	Msa1283990	-0.803895	2.802727e-49	-8.615850e-47
Msa0092670	Msa1292830	-0.853264	2.681455e-61	-8.615850e-47
Msa0092670	Msa1299360	-0.804399	2.201345e-49	-8.615850e-47
Msa0092670	Msa1307570	-0.814306	1.647962e-51	-8.615850e-47
Msa0092670	Msa1307950	-0.824867	6.394068e-54	-8.615850e-47
Msa0092670	Msa1313300	-0.832346	9.959932e-56	-8.615850e-47
Msa0092670	Msa1333560	-0.855553	5.841577e-62	-8.615850e-47
Msa0092670	Msa1337900	-0.800708	1.269682e-48	-8.615850e-47
Msa0092670	Msa1356610	-0.808904	2.462740e-50	-8.615850e-47
Msa0092670	Msa1365150	-0.813081	3.066323e-51	-8.615850e-47
Msa0092670	Msa1367880	-0.810072	1.382464e-50	-8.615850e-47
Msa0092670	Msa1369150	-0.848695	5.202097e-60	-8.615850e-47
Msa0092670	Msa1373330	-0.823734	1.180931e-53	-8.615850e-47
Msa0092670	Msa1374060	-0.811555	6.604095e-51	-8.615850e-47
Msa0092670	Msa1385070	-0.806405	8.357273e-50	-8.615850e-47
Msa0092670	Msa1411500	-0.818888	1.549779e-52	-8.615850e-47
Msa0092670	Msa1437460	-0.804259	2.353867e-49	-8.615850e-47
Msa0092670	Msa1440260	0.950123	3.150432e-108	-8.615850e-47
Msa0092670	Msa1442850	-0.810720	1.001635e-50	-8.615850e-47
Msa0092670	Msa1443300	-0.832876	7.358574e-56	-8.615850e-47
Msa0092670	Msa1443930	-0.812268	4.618168e-51	-8.615850e-47
Msa0092670	Msa1459380	-0.813265	2.793398e-51	-8.615850e-47
Msa0092670	Msa1459460	-0.802088	6.623423e-49	-8.615850e-47
Msa0092670	Msa1466990	-0.833661	4.692040e-56	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0092670	MtrunA17_Chr1g0209811	95.092	163	5	1	1	163	1	160	3.03e-106	300
Msa0092670	MtrunA17_Chr6g0457561	46.584	161	66	6	4	163	27	168	8.29e-35	119
Msa0092670	MtrunA17_Chr8g0391011	46.012	163	67	8	7	163	13	160	5.04e-29	104
Msa0092670	MtrunA17_Chr6g0484481	45.122	164	68	7	5	163	21	167	1.28e-25	96.3
Msa0092670	MtrunA17_Chr1g0171841	38.931	131	60	4	26	149	31	148	4.39e-13	63.2
Msa0092670	MtrunA17_Chr4g0045631	38.732	142	58	5	9	149	22	135	1.47e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0092670	AT1G68490.1	59.756	164	53	6	4	163	29	183	4.03e-49	157
Msa0092670	AT1G13390.1	52.469	162	65	5	4	163	25	176	4.89e-42	138
Msa0092670	AT1G13390.2	52.469	162	65	5	4	163	25	176	4.89e-42	138
Msa0092670	AT5G16110.1	50.909	165	67	7	4	163	89	244	1.94e-35	124
Msa0092670	AT3G02555.2	46.296	162	56	5	5	163	29	162	2.16e-27	100
Msa0092670	AT3G02555.1	46.296	162	56	5	5	163	29	162	2.16e-27	100

Find 108 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGCCGGATTGTTACCAAAAT+TGG	0.118190	1_2:-75353511	None:intergenic
TTGCAGATTGAGGGTTAATT+TGG	0.190437	1_2:+75353856	Msa0092670:three_prime_UTR
GGATGTGTTCGGGCCAATTT+TGG	0.234336	1_2:+75353498	Msa0092670:CDS
AGCTACGGGATAAGGAATTT+TGG	0.240607	1_2:+75353683	Msa0092670:three_prime_UTR
AGACACTAGTACAAGAAATA+AGG	0.256941	1_2:-75353890	None:intergenic
TGTAAGTAGAAGAGTCATTA+GGG	0.322886	1_2:+75353940	Msa0092670:three_prime_UTR
TTGTAACTACCGGCTTAAAA+AGG	0.335635	1_2:+75354013	Msa0092670:three_prime_UTR
AGTCCGACACGGCGGGGCTT+AGG	0.339729	1_2:-75352783	None:intergenic
AGTAGCTAACCCACTAATTC+AGG	0.341828	1_2:+75353365	Msa0092670:CDS
GTCAATAGTGTCTCTTGTTT+AGG	0.345549	1_2:+75353801	Msa0092670:three_prime_UTR
TTGTAAGTAGAAGAGTCATT+AGG	0.348876	1_2:+75353939	Msa0092670:three_prime_UTR
CTTATCCCGTAGCTCTTATA+TGG	0.352258	1_2:-75353674	None:intergenic
TAATTCAGGATGCTCGATTC+GGG	0.363565	1_2:+75353379	Msa0092670:CDS
CCTCCCTTCCTTGCAGAAGA+TGG	0.393816	1_2:-75353477	None:intergenic
CTAATTCAGGATGCTCGATT+CGG	0.401608	1_2:+75353378	Msa0092670:CDS
CATATAAGAGCTACGGGATA+AGG	0.402512	1_2:+75353675	Msa0092670:three_prime_UTR
AGAAGGTGGCAGACCGGATG+GGG	0.404001	1_2:-75353451	None:intergenic
GTGACTAAATAATGCGGTTA+AGG	0.406349	1_2:+75353833	Msa0092670:three_prime_UTR
GAGCAGGGATGCTGCAATTA+CGG	0.410027	1_2:-75353572	None:intergenic
CGCCCCTCTCACCGTCGTCA+TGG	0.419708	1_2:+75353415	Msa0092670:CDS
GTCCGACACGGCGGGGCTTA+GGG	0.420772	1_2:-75352782	None:intergenic
TGCAGATTGAGGGTTAATTT+GGG	0.421481	1_2:+75353857	Msa0092670:three_prime_UTR
CAAGGAAGGGAGGATGTGTT+CGG	0.421741	1_2:+75353487	Msa0092670:CDS
GATCCTTCCGGTGGCATCTC+AGG	0.425952	1_2:+75352838	Msa0092670:CDS
GACACTAGTACAAGAAATAA+GGG	0.430863	1_2:-75353889	None:intergenic
CTCCCTTCCTTGCAGAAGAT+GGG	0.432493	1_2:-75353476	None:intergenic
TAGTTACAATTACAATTCAT+AGG	0.433568	1_2:-75353999	None:intergenic
GGTGGAACTGCAAGCAAGCT+TGG	0.435280	1_2:-75352010	None:intergenic
AAGGATTCGATTGCCTTGAC+AGG	0.436802	1_2:+75353544	Msa0092670:CDS
CGGTTAAGGTTGCAGATTGA+GGG	0.439951	1_2:+75353847	Msa0092670:three_prime_UTR
TAATTGCAGCATCCCTGCTC+TGG	0.448656	1_2:+75353575	Msa0092670:CDS
GCCCCTCTCACCGTCGTCAT+GGG	0.457309	1_2:+75353416	Msa0092670:CDS
GGAGAAGGTGGCAGACCGGA+TGG	0.458776	1_2:-75353453	None:intergenic
GTGGAACTGCAAGCAAGCTT+GGG	0.463428	1_2:-75352009	None:intergenic
CTCATCTGCGTCAAATCCCT+TGG	0.463633	1_2:+75352987	Msa0092670:CDS
GGTGGCAGACCGGATGGGGC+AGG	0.466438	1_2:-75353447	None:intergenic
TGCCCTAAGCCCCGCCGTGT+CGG	0.473384	1_2:+75352780	Msa0092670:CDS
CTGTTGTTCTAAGCCAGAGC+AGG	0.481278	1_2:-75353588	None:intergenic
TAGAAGAAATGAAGAGGTGC+AGG	0.484324	1_2:-75352031	None:intergenic
GAGAAGGTGGCAGACCGGAT+GGG	0.484866	1_2:-75353452	None:intergenic
ATTGAAAGAAGAAAGTAAAG+AGG	0.489519	1_2:-75352068	None:intergenic
ACTACCCGAGCAGATCCTTC+CGG	0.494170	1_2:+75352826	Msa0092670:CDS
GTGGTGGTTCCTGCCCCATC+CGG	0.495940	1_2:+75353438	Msa0092670:CDS
TTGAATCACACGGTTCAACT+TGG	0.496164	1_2:-75352963	None:intergenic
GTTGAGGAGTCCGACACGGC+GGG	0.496709	1_2:-75352790	None:intergenic
GTAGAAGAGTCATTAGGGGA+TGG	0.509141	1_2:+75353945	Msa0092670:three_prime_UTR
GCGGTTAAGGTTGCAGATTG+AGG	0.511423	1_2:+75353846	Msa0092670:three_prime_UTR
CTCACCGTCGTCATGGGTGG+TGG	0.513742	1_2:+75353422	Msa0092670:CDS
TCTGCTCGGGTAGTCGTTGA+CGG	0.526759	1_2:-75352817	None:intergenic
TGAATTGTAATTGTAACTAC+CGG	0.527904	1_2:+75354003	Msa0092670:three_prime_UTR
AATAGAATGGGTTAATATCG+TGG	0.530353	1_2:+75351829	None:intergenic
GAATTTACTGTACAAAGCTA+TGG	0.531959	1_2:-75352113	None:intergenic
CCACCCATGACGACGGTGAG+AGG	0.533000	1_2:-75353419	None:intergenic
CAAAGTTACAAACAAGAGGA+TGG	0.534199	1_2:-75353919	None:intergenic
AATCCGGCGGTGAGAGTCGA+AGG	0.545936	1_2:+75353525	Msa0092670:CDS
TCCCTTCCTTGCAGAAGATG+GGG	0.546203	1_2:-75353475	None:intergenic
AATCGAGCATCCTGAATTAG+TGG	0.550154	1_2:-75353375	None:intergenic
CAACCACCATATAAGAGCTA+CGG	0.552833	1_2:+75353668	Msa0092670:three_prime_UTR
AGTCGTTGACGGCGAAGTTG+AGG	0.554697	1_2:-75352806	None:intergenic
AACCACCATATAAGAGCTAC+GGG	0.555576	1_2:+75353669	Msa0092670:three_prime_UTR
TAATGTATGGTTAATTCATG+CGG	0.557043	1_2:-75351890	None:intergenic
CACCCATGACGACGGTGAGA+GGG	0.562391	1_2:-75353418	None:intergenic
TTGGATGTCCTAGTTTGAAG+AGG	0.567788	1_2:+75353702	Msa0092670:three_prime_UTR
AAGGAAGGGAGGATGTGTTC+GGG	0.568345	1_2:+75353488	Msa0092670:CDS
AGAAAAGAAAATTTCGACGA+AGG	0.572219	1_2:+75352730	Msa0092670:five_prime_UTR
GCCACCGGAAGGATCTGCTC+GGG	0.575084	1_2:-75352830	None:intergenic
TTGGTGAGAATTGTGTCCAA+GGG	0.586012	1_2:-75353003	None:intergenic
CTTACAAAGTTACAAACAAG+AGG	0.586457	1_2:-75353923	None:intergenic
CCTCTCACCGTCGTCATGGG+TGG	0.588491	1_2:+75353419	Msa0092670:CDS
ATCCCGTAGCTCTTATATGG+TGG	0.589075	1_2:-75353671	None:intergenic
CTTGGTGAGAATTGTGTCCA+AGG	0.590478	1_2:-75353004	None:intergenic
GCAGGATGATGATTGTGATA+CGG	0.592153	1_2:+75353278	Msa0092670:intron
AATGTATGGTTAATTCATGC+GGG	0.595664	1_2:-75351889	None:intergenic
AGTGGGTTAGCTACTCTGCT+CGG	0.596257	1_2:-75353357	None:intergenic
TGCCACCGGAAGGATCTGCT+CGG	0.596625	1_2:-75352831	None:intergenic
AGGATTCGATTGCCTTGACA+GGG	0.597575	1_2:+75353545	Msa0092670:CDS
ATAGAATGGGTTAATATCGT+GGG	0.604680	1_2:+75351830	None:intergenic
CCATCTTCTGCAAGGAAGGG+AGG	0.605126	1_2:+75353477	Msa0092670:CDS
CCCTTCCTTGCAGAAGATGG+GGG	0.610451	1_2:-75353474	None:intergenic
ACCCATGACGACGGTGAGAG+GGG	0.613698	1_2:-75353417	None:intergenic
AATCCTTCGACTCTCACCGC+CGG	0.616188	1_2:-75353528	None:intergenic
CAGTAAATTCATTCAACACA+AGG	0.616519	1_2:+75352126	Msa0092670:five_prime_UTR
TTTCGACGAAGGAAGATGAA+CGG	0.620932	1_2:+75352741	Msa0092670:exon
AATTACGGCTGTCCCTGTCA+AGG	0.629306	1_2:-75353557	None:intergenic
ATCGAGCATCCTGAATTAGT+GGG	0.630666	1_2:-75353374	None:intergenic
GGCGGCGACGAGGCTACTGG+AGG	0.632101	1_2:-75353312	None:intergenic
AAATTCACCTGAGATGCCAC+CGG	0.634810	1_2:-75352845	None:intergenic
AAGAAATGAAGAGGTGCAGG+TGG	0.635822	1_2:-75352028	None:intergenic
TAAATATAAAGCAACGAGTG+TGG	0.638706	1_2:+75351974	Msa0092670:five_prime_UTR
TCACCTGAGATGCCACCGGA+AGG	0.642394	1_2:-75352841	None:intergenic
CGAAGTTGAGGAGTCCGACA+CGG	0.647237	1_2:-75352794	None:intergenic
GGAACCACCACCCATGACGA+CGG	0.659927	1_2:-75353426	None:intergenic
GCAGATGAGTTTGAATCACA+CGG	0.662013	1_2:-75352973	None:intergenic
TGTTGTTCTAAGCCAGAGCA+GGG	0.670625	1_2:-75353587	None:intergenic
ATGATGTGATATTACGCGGG+AGG	0.672546	1_2:+75351861	Msa0092670:five_prime_UTR
ACCCGAGCAGATCCTTCCGG+TGG	0.672658	1_2:+75352829	Msa0092670:CDS
AATTCAGGATGCTCGATTCG+GGG	0.678593	1_2:+75353380	Msa0092670:CDS
TATATAGTGACTAAATAATG+CGG	0.682777	1_2:+75353827	Msa0092670:three_prime_UTR
AGTTGAGGAGTCCGACACGG+CGG	0.682882	1_2:-75352791	None:intergenic
TTGAGGAGTCCGACACGGCG+GGG	0.686362	1_2:-75352789	None:intergenic
GCGGGGCTTAGGGCAAACGA+CGG	0.692402	1_2:-75352772	None:intergenic
AAAATGATGTGATATTACGC+GGG	0.699449	1_2:+75351858	Msa0092670:five_prime_UTR
GTAAGTAGAAGAGTCATTAG+GGG	0.703281	1_2:+75353941	Msa0092670:three_prime_UTR
CTTGGACACAATTCTCACCA+AGG	0.706031	1_2:+75353005	Msa0092670:CDS
GTATGGTTAATTCATGCGGG+CGG	0.716668	1_2:-75351886	None:intergenic
TGGTTGTAGAAGAAATGAAG+AGG	0.719069	1_2:-75352037	None:intergenic
GGGTTAGCTACTCTGCTCGG+CGG	0.725325	1_2:-75353354	None:intergenic
AAAGTAAAGAGGATGTTGTG+TGG	0.752917	1_2:-75352057	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAGTTTTGTTTTAATTTTA+TGG	+	chr1_2:75352383-75352402	Msa0092670:intron	10.0%
!!	AAATTCATATAAAATAATAG+AGG	-	chr1_2:75353040-75353059	None:intergenic	10.0%
!!!	CTATTATTTTATATGAATTT+AGG	+	chr1_2:75353040-75353059	Msa0092670:intron	10.0%
!!!	CTATTATTTTATATGAATTT+AGG	+	chr1_2:75353040-75353059	Msa0092670:intron	10.0%
!!!	ATAGTTTTGTTTTAATTTTA+TGG	+	chr1_2:75352383-75352402	Msa0092670:intron	10.0%
!!	AAATTCATATAAAATAATAG+AGG	-	chr1_2:75353040-75353059	None:intergenic	10.0%
!!!	CTATTATTTTATATGAATTT+AGG	+	chr1_2:75353040-75353059	Msa0092670:intron	10.0%
!!!	CTATTATTTTATATGAATTT+AGG	+	chr1_2:75353040-75353059	Msa0092670:intron	10.0%
!!!	AAGATATTTTTAGTAATGTA+TGG	-	chr1_2:75351906-75351925	None:intergenic	15.0%
!!	AGAAATAGAAATAGAATAAA+AGG	-	chr1_2:75352204-75352223	None:intergenic	15.0%
!!	AAAATTTCATCATGAAAAAA+CGG	-	chr1_2:75352316-75352335	None:intergenic	15.0%
!!!	TGTTTTATTTGTTAGTTTAA+CGG	+	chr1_2:75352359-75352378	Msa0092670:intron	15.0%
!!!	AAACGTGTTTATAATTTTTT+TGG	+	chr1_2:75352497-75352516	Msa0092670:intron	15.0%
!!!	ATATGAATTTAGGTTAAAAT+TGG	+	chr1_2:75353050-75353069	Msa0092670:intron	15.0%
!!!	AATTGATCTATTTTTAACAT+TGG	+	chr1_2:75353118-75353137	Msa0092670:intron	15.0%
!!!	TTCATTTTGATTTTCTTTTA+TGG	+	chr1_2:75353974-75353993	Msa0092670:three_prime_UTR	15.0%
!!!	TCATTTTGATTTTCTTTTAT+GGG	+	chr1_2:75353975-75353994	Msa0092670:three_prime_UTR	15.0%
!!!	AAGATATTTTTAGTAATGTA+TGG	-	chr1_2:75351906-75351925	None:intergenic	15.0%
!!	AGAAATAGAAATAGAATAAA+AGG	-	chr1_2:75352204-75352223	None:intergenic	15.0%
!!	AAAATTTCATCATGAAAAAA+CGG	-	chr1_2:75352316-75352335	None:intergenic	15.0%
!!!	TGTTTTATTTGTTAGTTTAA+CGG	+	chr1_2:75352359-75352378	Msa0092670:intron	15.0%
!!!	AAACGTGTTTATAATTTTTT+TGG	+	chr1_2:75352497-75352516	Msa0092670:intron	15.0%
!!!	ATATGAATTTAGGTTAAAAT+TGG	+	chr1_2:75353050-75353069	Msa0092670:intron	15.0%
!!!	AATTGATCTATTTTTAACAT+TGG	+	chr1_2:75353118-75353137	Msa0092670:intron	15.0%
!!!	TTCATTTTGATTTTCTTTTA+TGG	+	chr1_2:75353974-75353993	Msa0092670:three_prime_UTR	15.0%
!!!	TCATTTTGATTTTCTTTTAT+GGG	+	chr1_2:75353975-75353994	Msa0092670:three_prime_UTR	15.0%
!!	AGAAATAGAATAAAAGGAAA+CGG	-	chr1_2:75352198-75352217	None:intergenic	20.0%
!!	TTGAATATATGTGGAAAAAA+TGG	-	chr1_2:75352248-75352267	None:intergenic	20.0%
!!	AGATTAAAGTTGAATATATG+TGG	-	chr1_2:75352257-75352276	None:intergenic	20.0%
!!	CGAAAAAACAATAACAATTA+AGG	+	chr1_2:75352441-75352460	Msa0092670:intron	20.0%
!!!	TTTTCTCTTTTAATTTGCTT+TGG	+	chr1_2:75352890-75352909	Msa0092670:intron	20.0%
!!	TATATAGTGACTAAATAATG+CGG	+	chr1_2:75353827-75353846	Msa0092670:three_prime_UTR	20.0%
!!	TAGTTACAATTACAATTCAT+AGG	-	chr1_2:75354002-75354021	None:intergenic	20.0%
!!	AGAAATAGAATAAAAGGAAA+CGG	-	chr1_2:75352198-75352217	None:intergenic	20.0%
!!	TTGAATATATGTGGAAAAAA+TGG	-	chr1_2:75352248-75352267	None:intergenic	20.0%
!!	AGATTAAAGTTGAATATATG+TGG	-	chr1_2:75352257-75352276	None:intergenic	20.0%
!!	CGAAAAAACAATAACAATTA+AGG	+	chr1_2:75352441-75352460	Msa0092670:intron	20.0%
!!!	TTTTCTCTTTTAATTTGCTT+TGG	+	chr1_2:75352890-75352909	Msa0092670:intron	20.0%
!!	TATATAGTGACTAAATAATG+CGG	+	chr1_2:75353827-75353846	Msa0092670:three_prime_UTR	20.0%
!!	TAGTTACAATTACAATTCAT+AGG	-	chr1_2:75354002-75354021	None:intergenic	20.0%
!	AAAAATGATGTGATATTACG+CGG	+	chr1_2:75351857-75351876	Msa0092670:five_prime_UTR	25.0%
!	TAATGTATGGTTAATTCATG+CGG	-	chr1_2:75351893-75351912	None:intergenic	25.0%
!	ATTGAAAGAAGAAAGTAAAG+AGG	-	chr1_2:75352071-75352090	None:intergenic	25.0%
!!!	ATATATCTCGTTCTGAATTT+TGG	+	chr1_2:75352668-75352687	Msa0092670:intron	25.0%
!	AATAGAGGAATTATTTACCT+TGG	-	chr1_2:75353025-75353044	None:intergenic	25.0%
!	TGAATTGTAATTGTAACTAC+CGG	+	chr1_2:75354003-75354022	Msa0092670:three_prime_UTR	25.0%
!!!	ACAAATTTTCCTTTTTAAGC+CGG	-	chr1_2:75354025-75354044	None:intergenic	25.0%
!	AAAAATGATGTGATATTACG+CGG	+	chr1_2:75351857-75351876	Msa0092670:five_prime_UTR	25.0%
!	TAATGTATGGTTAATTCATG+CGG	-	chr1_2:75351893-75351912	None:intergenic	25.0%
!	ATTGAAAGAAGAAAGTAAAG+AGG	-	chr1_2:75352071-75352090	None:intergenic	25.0%
!!!	ATATATCTCGTTCTGAATTT+TGG	+	chr1_2:75352668-75352687	Msa0092670:intron	25.0%
!	AATAGAGGAATTATTTACCT+TGG	-	chr1_2:75353025-75353044	None:intergenic	25.0%
!	TGAATTGTAATTGTAACTAC+CGG	+	chr1_2:75354003-75354022	Msa0092670:three_prime_UTR	25.0%
!!!	ACAAATTTTCCTTTTTAAGC+CGG	-	chr1_2:75354025-75354044	None:intergenic	25.0%
	AAAATGATGTGATATTACGC+GGG	+	chr1_2:75351858-75351877	Msa0092670:five_prime_UTR	30.0%
	AATGTATGGTTAATTCATGC+GGG	-	chr1_2:75351892-75351911	None:intergenic	30.0%
	TAAATATAAAGCAACGAGTG+TGG	+	chr1_2:75351974-75351993	Msa0092670:five_prime_UTR	30.0%
	GAATTTACTGTACAAAGCTA+TGG	-	chr1_2:75352116-75352135	None:intergenic	30.0%
	CAGTAAATTCATTCAACACA+AGG	+	chr1_2:75352126-75352145	Msa0092670:five_prime_UTR	30.0%
	AGAAAAGAAAATTTCGACGA+AGG	+	chr1_2:75352730-75352749	Msa0092670:five_prime_UTR	30.0%
	ACACAAAGCAATTCAACAAA+AGG	-	chr1_2:75353214-75353233	None:intergenic	30.0%
	GACACTAGTACAAGAAATAA+GGG	-	chr1_2:75353892-75353911	None:intergenic	30.0%
	AGACACTAGTACAAGAAATA+AGG	-	chr1_2:75353893-75353912	None:intergenic	30.0%
	CTTACAAAGTTACAAACAAG+AGG	-	chr1_2:75353926-75353945	None:intergenic	30.0%
	TTGTAAGTAGAAGAGTCATT+AGG	+	chr1_2:75353939-75353958	Msa0092670:three_prime_UTR	30.0%
	TGTAAGTAGAAGAGTCATTA+GGG	+	chr1_2:75353940-75353959	Msa0092670:three_prime_UTR	30.0%
	TATTTAGCAACTTGAATGAC+AGG	+	chr1_2:75354084-75354103	Msa0092670:three_prime_UTR	30.0%
	AAAATGATGTGATATTACGC+GGG	+	chr1_2:75351858-75351877	Msa0092670:five_prime_UTR	30.0%
	AATGTATGGTTAATTCATGC+GGG	-	chr1_2:75351892-75351911	None:intergenic	30.0%
	TAAATATAAAGCAACGAGTG+TGG	+	chr1_2:75351974-75351993	Msa0092670:five_prime_UTR	30.0%
	GAATTTACTGTACAAAGCTA+TGG	-	chr1_2:75352116-75352135	None:intergenic	30.0%
	CAGTAAATTCATTCAACACA+AGG	+	chr1_2:75352126-75352145	Msa0092670:five_prime_UTR	30.0%
	AGAAAAGAAAATTTCGACGA+AGG	+	chr1_2:75352730-75352749	Msa0092670:five_prime_UTR	30.0%
	ACACAAAGCAATTCAACAAA+AGG	-	chr1_2:75353214-75353233	None:intergenic	30.0%
	GACACTAGTACAAGAAATAA+GGG	-	chr1_2:75353892-75353911	None:intergenic	30.0%
	AGACACTAGTACAAGAAATA+AGG	-	chr1_2:75353893-75353912	None:intergenic	30.0%
	CTTACAAAGTTACAAACAAG+AGG	-	chr1_2:75353926-75353945	None:intergenic	30.0%
	TTGTAAGTAGAAGAGTCATT+AGG	+	chr1_2:75353939-75353958	Msa0092670:three_prime_UTR	30.0%
	TGTAAGTAGAAGAGTCATTA+GGG	+	chr1_2:75353940-75353959	Msa0092670:three_prime_UTR	30.0%
	TGGTTGTAGAAGAAATGAAG+AGG	-	chr1_2:75352040-75352059	None:intergenic	35.0%
	AAAGTAAAGAGGATGTTGTG+TGG	-	chr1_2:75352060-75352079	None:intergenic	35.0%
	TTAAGGTGATTAGAGCTAAG+CGG	+	chr1_2:75352458-75352477	Msa0092670:intron	35.0%
	GGAAAAATTGTAACAGCTCA+AGG	-	chr1_2:75352550-75352569	None:intergenic	35.0%
	AGAAACGTTCATTTCATGGA+CGG	-	chr1_2:75352571-75352590	None:intergenic	35.0%
	GATGAGAAACGTTCATTTCA+TGG	-	chr1_2:75352575-75352594	None:intergenic	35.0%
!	ACTCTTTTCCTCTTCAAACT+AGG	-	chr1_2:75353713-75353732	None:intergenic	35.0%
!	GTCAATAGTGTCTCTTGTTT+AGG	+	chr1_2:75353801-75353820	Msa0092670:three_prime_UTR	35.0%
	GTGACTAAATAATGCGGTTA+AGG	+	chr1_2:75353833-75353852	Msa0092670:three_prime_UTR	35.0%
	TTGCAGATTGAGGGTTAATT+TGG	+	chr1_2:75353856-75353875	Msa0092670:three_prime_UTR	35.0%
	TGCAGATTGAGGGTTAATTT+GGG	+	chr1_2:75353857-75353876	Msa0092670:three_prime_UTR	35.0%
	CAAAGTTACAAACAAGAGGA+TGG	-	chr1_2:75353922-75353941	None:intergenic	35.0%
	GTAAGTAGAAGAGTCATTAG+GGG	+	chr1_2:75353941-75353960	Msa0092670:three_prime_UTR	35.0%
!!	TTGTAACTACCGGCTTAAAA+AGG	+	chr1_2:75354013-75354032	Msa0092670:three_prime_UTR	35.0%
	TGGTTGTAGAAGAAATGAAG+AGG	-	chr1_2:75352040-75352059	None:intergenic	35.0%
	AAAGTAAAGAGGATGTTGTG+TGG	-	chr1_2:75352060-75352079	None:intergenic	35.0%
	TTAAGGTGATTAGAGCTAAG+CGG	+	chr1_2:75352458-75352477	Msa0092670:intron	35.0%
	GGAAAAATTGTAACAGCTCA+AGG	-	chr1_2:75352550-75352569	None:intergenic	35.0%
	AGAAACGTTCATTTCATGGA+CGG	-	chr1_2:75352571-75352590	None:intergenic	35.0%
	GATGAGAAACGTTCATTTCA+TGG	-	chr1_2:75352575-75352594	None:intergenic	35.0%
!	ACTCTTTTCCTCTTCAAACT+AGG	-	chr1_2:75353713-75353732	None:intergenic	35.0%
!	GTCAATAGTGTCTCTTGTTT+AGG	+	chr1_2:75353801-75353820	Msa0092670:three_prime_UTR	35.0%
	GTGACTAAATAATGCGGTTA+AGG	+	chr1_2:75353833-75353852	Msa0092670:three_prime_UTR	35.0%
	TTGCAGATTGAGGGTTAATT+TGG	+	chr1_2:75353856-75353875	Msa0092670:three_prime_UTR	35.0%
	TGCAGATTGAGGGTTAATTT+GGG	+	chr1_2:75353857-75353876	Msa0092670:three_prime_UTR	35.0%
	CAAAGTTACAAACAAGAGGA+TGG	-	chr1_2:75353922-75353941	None:intergenic	35.0%
	GTAAGTAGAAGAGTCATTAG+GGG	+	chr1_2:75353941-75353960	Msa0092670:three_prime_UTR	35.0%
!!	TTGTAACTACCGGCTTAAAA+AGG	+	chr1_2:75354013-75354032	Msa0092670:three_prime_UTR	35.0%
!	TAGAAGAAATGAAGAGGTGC+AGG	-	chr1_2:75352034-75352053	None:intergenic	40.0%
	AACAGCTCAAGGTTAAGATC+TGG	-	chr1_2:75352539-75352558	None:intergenic	40.0%
	TTTCGACGAAGGAAGATGAA+CGG	+	chr1_2:75352741-75352760	Msa0092670:exon	40.0%
	TTGAATCACACGGTTCAACT+TGG	-	chr1_2:75352966-75352985	None:intergenic	40.0%
	GCAGATGAGTTTGAATCACA+CGG	-	chr1_2:75352976-75352995	None:intergenic	40.0%
	TTGGTGAGAATTGTGTCCAA+GGG	-	chr1_2:75353006-75353025	None:intergenic	40.0%
!!	GTTGTGCTTTTGTGATTTGC+AGG	+	chr1_2:75353260-75353279	Msa0092670:intron	40.0%
	GCAGGATGATGATTGTGATA+CGG	+	chr1_2:75353278-75353297	Msa0092670:intron	40.0%
	AGTAGCTAACCCACTAATTC+AGG	+	chr1_2:75353365-75353384	Msa0092670:CDS	40.0%
	ATCGAGCATCCTGAATTAGT+GGG	-	chr1_2:75353377-75353396	None:intergenic	40.0%
	AATCGAGCATCCTGAATTAG+TGG	-	chr1_2:75353378-75353397	None:intergenic	40.0%
	CTAATTCAGGATGCTCGATT+CGG	+	chr1_2:75353378-75353397	Msa0092670:CDS	40.0%
	TAATTCAGGATGCTCGATTC+GGG	+	chr1_2:75353379-75353398	Msa0092670:CDS	40.0%
!!	GGCCAATTTTGGTAACAATC+CGG	+	chr1_2:75353509-75353528	Msa0092670:CDS	40.0%
!!	CAATTTTGGTAACAATCCGG+CGG	+	chr1_2:75353512-75353531	Msa0092670:CDS	40.0%
	CAACCACCATATAAGAGCTA+CGG	+	chr1_2:75353668-75353687	Msa0092670:three_prime_UTR	40.0%
	AACCACCATATAAGAGCTAC+GGG	+	chr1_2:75353669-75353688	Msa0092670:three_prime_UTR	40.0%
	CTTATCCCGTAGCTCTTATA+TGG	-	chr1_2:75353677-75353696	None:intergenic	40.0%
	CATATAAGAGCTACGGGATA+AGG	+	chr1_2:75353675-75353694	Msa0092670:three_prime_UTR	40.0%
!	AGCTACGGGATAAGGAATTT+TGG	+	chr1_2:75353683-75353702	Msa0092670:three_prime_UTR	40.0%
	TTGGATGTCCTAGTTTGAAG+AGG	+	chr1_2:75353702-75353721	Msa0092670:three_prime_UTR	40.0%
!	TAGAAGAAATGAAGAGGTGC+AGG	-	chr1_2:75352034-75352053	None:intergenic	40.0%
	AACAGCTCAAGGTTAAGATC+TGG	-	chr1_2:75352539-75352558	None:intergenic	40.0%
	TTTCGACGAAGGAAGATGAA+CGG	+	chr1_2:75352741-75352760	Msa0092670:exon	40.0%
	TTGAATCACACGGTTCAACT+TGG	-	chr1_2:75352966-75352985	None:intergenic	40.0%
	GCAGATGAGTTTGAATCACA+CGG	-	chr1_2:75352976-75352995	None:intergenic	40.0%
	TTGGTGAGAATTGTGTCCAA+GGG	-	chr1_2:75353006-75353025	None:intergenic	40.0%
!!	GTTGTGCTTTTGTGATTTGC+AGG	+	chr1_2:75353260-75353279	Msa0092670:intron	40.0%
	GCAGGATGATGATTGTGATA+CGG	+	chr1_2:75353278-75353297	Msa0092670:intron	40.0%
	AGTAGCTAACCCACTAATTC+AGG	+	chr1_2:75353365-75353384	Msa0092670:CDS	40.0%
	ATCGAGCATCCTGAATTAGT+GGG	-	chr1_2:75353377-75353396	None:intergenic	40.0%
	AATCGAGCATCCTGAATTAG+TGG	-	chr1_2:75353378-75353397	None:intergenic	40.0%
	CTAATTCAGGATGCTCGATT+CGG	+	chr1_2:75353378-75353397	Msa0092670:CDS	40.0%
	TAATTCAGGATGCTCGATTC+GGG	+	chr1_2:75353379-75353398	Msa0092670:CDS	40.0%
!!	GGCCAATTTTGGTAACAATC+CGG	+	chr1_2:75353509-75353528	Msa0092670:CDS	40.0%
!!	CAATTTTGGTAACAATCCGG+CGG	+	chr1_2:75353512-75353531	Msa0092670:CDS	40.0%
	CAACCACCATATAAGAGCTA+CGG	+	chr1_2:75353668-75353687	Msa0092670:three_prime_UTR	40.0%
	AACCACCATATAAGAGCTAC+GGG	+	chr1_2:75353669-75353688	Msa0092670:three_prime_UTR	40.0%
	CTTATCCCGTAGCTCTTATA+TGG	-	chr1_2:75353677-75353696	None:intergenic	40.0%
	CATATAAGAGCTACGGGATA+AGG	+	chr1_2:75353675-75353694	Msa0092670:three_prime_UTR	40.0%
!	AGCTACGGGATAAGGAATTT+TGG	+	chr1_2:75353683-75353702	Msa0092670:three_prime_UTR	40.0%
	TTGGATGTCCTAGTTTGAAG+AGG	+	chr1_2:75353702-75353721	Msa0092670:three_prime_UTR	40.0%
	ATGATGTGATATTACGCGGG+AGG	+	chr1_2:75351861-75351880	Msa0092670:five_prime_UTR	45.0%
	GTATGGTTAATTCATGCGGG+CGG	-	chr1_2:75351889-75351908	None:intergenic	45.0%
!	AAGAAATGAAGAGGTGCAGG+TGG	-	chr1_2:75352031-75352050	None:intergenic	45.0%
	AAATTCACCTGAGATGCCAC+CGG	-	chr1_2:75352848-75352867	None:intergenic	45.0%
	CTTGGTGAGAATTGTGTCCA+AGG	-	chr1_2:75353007-75353026	None:intergenic	45.0%
	CTTGGACACAATTCTCACCA+AGG	+	chr1_2:75353005-75353024	Msa0092670:CDS	45.0%
!	AATTCAGGATGCTCGATTCG+GGG	+	chr1_2:75353380-75353399	Msa0092670:CDS	45.0%
	CGCCGGATTGTTACCAAAAT+TGG	-	chr1_2:75353514-75353533	None:intergenic	45.0%
	AAGGATTCGATTGCCTTGAC+AGG	+	chr1_2:75353544-75353563	Msa0092670:CDS	45.0%
	AGGATTCGATTGCCTTGACA+GGG	+	chr1_2:75353545-75353564	Msa0092670:CDS	45.0%
!	TGTTGTTCTAAGCCAGAGCA+GGG	-	chr1_2:75353590-75353609	None:intergenic	45.0%
	ATCCCGTAGCTCTTATATGG+TGG	-	chr1_2:75353674-75353693	None:intergenic	45.0%
	CGGTTAAGGTTGCAGATTGA+GGG	+	chr1_2:75353847-75353866	Msa0092670:three_prime_UTR	45.0%
	GTAGAAGAGTCATTAGGGGA+TGG	+	chr1_2:75353945-75353964	Msa0092670:three_prime_UTR	45.0%
	ATGATGTGATATTACGCGGG+AGG	+	chr1_2:75351861-75351880	Msa0092670:five_prime_UTR	45.0%
	GTATGGTTAATTCATGCGGG+CGG	-	chr1_2:75351889-75351908	None:intergenic	45.0%
!	AAGAAATGAAGAGGTGCAGG+TGG	-	chr1_2:75352031-75352050	None:intergenic	45.0%
	AAATTCACCTGAGATGCCAC+CGG	-	chr1_2:75352848-75352867	None:intergenic	45.0%
	CTTGGTGAGAATTGTGTCCA+AGG	-	chr1_2:75353007-75353026	None:intergenic	45.0%
	CTTGGACACAATTCTCACCA+AGG	+	chr1_2:75353005-75353024	Msa0092670:CDS	45.0%
!	AATTCAGGATGCTCGATTCG+GGG	+	chr1_2:75353380-75353399	Msa0092670:CDS	45.0%
	CGCCGGATTGTTACCAAAAT+TGG	-	chr1_2:75353514-75353533	None:intergenic	45.0%
	AAGGATTCGATTGCCTTGAC+AGG	+	chr1_2:75353544-75353563	Msa0092670:CDS	45.0%
	AGGATTCGATTGCCTTGACA+GGG	+	chr1_2:75353545-75353564	Msa0092670:CDS	45.0%
!	TGTTGTTCTAAGCCAGAGCA+GGG	-	chr1_2:75353590-75353609	None:intergenic	45.0%
	ATCCCGTAGCTCTTATATGG+TGG	-	chr1_2:75353674-75353693	None:intergenic	45.0%
	CGGTTAAGGTTGCAGATTGA+GGG	+	chr1_2:75353847-75353866	Msa0092670:three_prime_UTR	45.0%
	GTAGAAGAGTCATTAGGGGA+TGG	+	chr1_2:75353945-75353964	Msa0092670:three_prime_UTR	45.0%
	GTGGAACTGCAAGCAAGCTT+GGG	-	chr1_2:75352012-75352031	None:intergenic	50.0%
	CTCATCTGCGTCAAATCCCT+TGG	+	chr1_2:75352987-75353006	Msa0092670:CDS	50.0%
	GGAGACCCACAGAAAAATGG+GGG	-	chr1_2:75353336-75353355	None:intergenic	50.0%
	CGGAGACCCACAGAAAAATG+GGG	-	chr1_2:75353337-75353356	None:intergenic	50.0%
	GCGGAGACCCACAGAAAAAT+GGG	-	chr1_2:75353338-75353357	None:intergenic	50.0%
!!	AGTGGGTTAGCTACTCTGCT+CGG	-	chr1_2:75353360-75353379	None:intergenic	50.0%
	TCCCTTCCTTGCAGAAGATG+GGG	-	chr1_2:75353478-75353497	None:intergenic	50.0%
	CTCCCTTCCTTGCAGAAGAT+GGG	-	chr1_2:75353479-75353498	None:intergenic	50.0%
	CAAGGAAGGGAGGATGTGTT+CGG	+	chr1_2:75353487-75353506	Msa0092670:CDS	50.0%
	AAGGAAGGGAGGATGTGTTC+GGG	+	chr1_2:75353488-75353507	Msa0092670:CDS	50.0%
!	GGATGTGTTCGGGCCAATTT+TGG	+	chr1_2:75353498-75353517	Msa0092670:CDS	50.0%
	AATTACGGCTGTCCCTGTCA+AGG	-	chr1_2:75353560-75353579	None:intergenic	50.0%
	GAGCAGGGATGCTGCAATTA+CGG	-	chr1_2:75353575-75353594	None:intergenic	50.0%
	TAATTGCAGCATCCCTGCTC+TGG	+	chr1_2:75353575-75353594	Msa0092670:CDS	50.0%
!	CTGTTGTTCTAAGCCAGAGC+AGG	-	chr1_2:75353591-75353610	None:intergenic	50.0%
	GCGGTTAAGGTTGCAGATTG+AGG	+	chr1_2:75353846-75353865	Msa0092670:three_prime_UTR	50.0%
	GTGGAACTGCAAGCAAGCTT+GGG	-	chr1_2:75352012-75352031	None:intergenic	50.0%
	CTCATCTGCGTCAAATCCCT+TGG	+	chr1_2:75352987-75353006	Msa0092670:CDS	50.0%
	GGAGACCCACAGAAAAATGG+GGG	-	chr1_2:75353336-75353355	None:intergenic	50.0%
	CGGAGACCCACAGAAAAATG+GGG	-	chr1_2:75353337-75353356	None:intergenic	50.0%
	GCGGAGACCCACAGAAAAAT+GGG	-	chr1_2:75353338-75353357	None:intergenic	50.0%
!!	AGTGGGTTAGCTACTCTGCT+CGG	-	chr1_2:75353360-75353379	None:intergenic	50.0%
	TCCCTTCCTTGCAGAAGATG+GGG	-	chr1_2:75353478-75353497	None:intergenic	50.0%
	CTCCCTTCCTTGCAGAAGAT+GGG	-	chr1_2:75353479-75353498	None:intergenic	50.0%
	CAAGGAAGGGAGGATGTGTT+CGG	+	chr1_2:75353487-75353506	Msa0092670:CDS	50.0%
	AAGGAAGGGAGGATGTGTTC+GGG	+	chr1_2:75353488-75353507	Msa0092670:CDS	50.0%
!	GGATGTGTTCGGGCCAATTT+TGG	+	chr1_2:75353498-75353517	Msa0092670:CDS	50.0%
	AATTACGGCTGTCCCTGTCA+AGG	-	chr1_2:75353560-75353579	None:intergenic	50.0%
	GAGCAGGGATGCTGCAATTA+CGG	-	chr1_2:75353575-75353594	None:intergenic	50.0%
	TAATTGCAGCATCCCTGCTC+TGG	+	chr1_2:75353575-75353594	Msa0092670:CDS	50.0%
!	CTGTTGTTCTAAGCCAGAGC+AGG	-	chr1_2:75353591-75353610	None:intergenic	50.0%
	GCGGTTAAGGTTGCAGATTG+AGG	+	chr1_2:75353846-75353865	Msa0092670:three_prime_UTR	50.0%
	GGTGGAACTGCAAGCAAGCT+TGG	-	chr1_2:75352013-75352032	None:intergenic	55.0%
	CGAAGTTGAGGAGTCCGACA+CGG	-	chr1_2:75352797-75352816	None:intergenic	55.0%
	AGTCGTTGACGGCGAAGTTG+AGG	-	chr1_2:75352809-75352828	None:intergenic	55.0%
	TCTGCTCGGGTAGTCGTTGA+CGG	-	chr1_2:75352820-75352839	None:intergenic	55.0%
	ACTACCCGAGCAGATCCTTC+CGG	+	chr1_2:75352826-75352845	Msa0092670:CDS	55.0%
	GACCCACAGAAAAATGGGGG+CGG	-	chr1_2:75353333-75353352	None:intergenic	55.0%
	GGCGGAGACCCACAGAAAAA+TGG	-	chr1_2:75353339-75353358	None:intergenic	55.0%
	CTTGCAGAAGATGGGGGAGA+AGG	-	chr1_2:75353471-75353490	None:intergenic	55.0%
	CTTCTCCCCCATCTTCTGCA+AGG	+	chr1_2:75353469-75353488	Msa0092670:CDS	55.0%
	TCCCCCATCTTCTGCAAGGA+AGG	+	chr1_2:75353473-75353492	Msa0092670:CDS	55.0%
	CCCTTCCTTGCAGAAGATGG+GGG	-	chr1_2:75353477-75353496	None:intergenic	55.0%
	CCCCCATCTTCTGCAAGGAA+GGG	+	chr1_2:75353474-75353493	Msa0092670:CDS	55.0%
	CCTCCCTTCCTTGCAGAAGA+TGG	-	chr1_2:75353480-75353499	None:intergenic	55.0%
	CCATCTTCTGCAAGGAAGGG+AGG	+	chr1_2:75353477-75353496	Msa0092670:CDS	55.0%
	AATCCTTCGACTCTCACCGC+CGG	-	chr1_2:75353531-75353550	None:intergenic	55.0%
	GGTGGAACTGCAAGCAAGCT+TGG	-	chr1_2:75352013-75352032	None:intergenic	55.0%
	CGAAGTTGAGGAGTCCGACA+CGG	-	chr1_2:75352797-75352816	None:intergenic	55.0%
	AGTCGTTGACGGCGAAGTTG+AGG	-	chr1_2:75352809-75352828	None:intergenic	55.0%
	TCTGCTCGGGTAGTCGTTGA+CGG	-	chr1_2:75352820-75352839	None:intergenic	55.0%
	ACTACCCGAGCAGATCCTTC+CGG	+	chr1_2:75352826-75352845	Msa0092670:CDS	55.0%
	GACCCACAGAAAAATGGGGG+CGG	-	chr1_2:75353333-75353352	None:intergenic	55.0%
	GGCGGAGACCCACAGAAAAA+TGG	-	chr1_2:75353339-75353358	None:intergenic	55.0%
	CTTGCAGAAGATGGGGGAGA+AGG	-	chr1_2:75353471-75353490	None:intergenic	55.0%
	CTTCTCCCCCATCTTCTGCA+AGG	+	chr1_2:75353469-75353488	Msa0092670:CDS	55.0%
	TCCCCCATCTTCTGCAAGGA+AGG	+	chr1_2:75353473-75353492	Msa0092670:CDS	55.0%
	CCCTTCCTTGCAGAAGATGG+GGG	-	chr1_2:75353477-75353496	None:intergenic	55.0%
	CCCCCATCTTCTGCAAGGAA+GGG	+	chr1_2:75353474-75353493	Msa0092670:CDS	55.0%
	CCTCCCTTCCTTGCAGAAGA+TGG	-	chr1_2:75353480-75353499	None:intergenic	55.0%
	CCATCTTCTGCAAGGAAGGG+AGG	+	chr1_2:75353477-75353496	Msa0092670:CDS	55.0%
	AATCCTTCGACTCTCACCGC+CGG	-	chr1_2:75353531-75353550	None:intergenic	55.0%
	AGTTGAGGAGTCCGACACGG+CGG	-	chr1_2:75352794-75352813	None:intergenic	60.0%
	TGCCACCGGAAGGATCTGCT+CGG	-	chr1_2:75352834-75352853	None:intergenic	60.0%
	GATCCTTCCGGTGGCATCTC+AGG	+	chr1_2:75352838-75352857	Msa0092670:CDS	60.0%
	TCACCTGAGATGCCACCGGA+AGG	-	chr1_2:75352844-75352863	None:intergenic	60.0%
!!	TCGCCGCCCCCATTTTTCTG+TGG	+	chr1_2:75353327-75353346	Msa0092670:CDS	60.0%
!!	CGCCGCCCCCATTTTTCTGT+GGG	+	chr1_2:75353328-75353347	Msa0092670:CDS	60.0%
!!	GGGTTAGCTACTCTGCTCGG+CGG	-	chr1_2:75353357-75353376	None:intergenic	60.0%
	ACCCATGACGACGGTGAGAG+GGG	-	chr1_2:75353420-75353439	None:intergenic	60.0%
	CACCCATGACGACGGTGAGA+GGG	-	chr1_2:75353421-75353440	None:intergenic	60.0%
	GGAACCACCACCCATGACGA+CGG	-	chr1_2:75353429-75353448	None:intergenic	60.0%
	AGAAGGTGGCAGACCGGATG+GGG	-	chr1_2:75353454-75353473	None:intergenic	60.0%
	GAGAAGGTGGCAGACCGGAT+GGG	-	chr1_2:75353455-75353474	None:intergenic	60.0%
	GCAGAAGATGGGGGAGAAGG+TGG	-	chr1_2:75353468-75353487	None:intergenic	60.0%
	AATCCGGCGGTGAGAGTCGA+AGG	+	chr1_2:75353525-75353544	Msa0092670:CDS	60.0%
	AGTTGAGGAGTCCGACACGG+CGG	-	chr1_2:75352794-75352813	None:intergenic	60.0%
	TGCCACCGGAAGGATCTGCT+CGG	-	chr1_2:75352834-75352853	None:intergenic	60.0%
	GATCCTTCCGGTGGCATCTC+AGG	+	chr1_2:75352838-75352857	Msa0092670:CDS	60.0%
	TCACCTGAGATGCCACCGGA+AGG	-	chr1_2:75352844-75352863	None:intergenic	60.0%
!!	TCGCCGCCCCCATTTTTCTG+TGG	+	chr1_2:75353327-75353346	Msa0092670:CDS	60.0%
!!	CGCCGCCCCCATTTTTCTGT+GGG	+	chr1_2:75353328-75353347	Msa0092670:CDS	60.0%
!!	GGGTTAGCTACTCTGCTCGG+CGG	-	chr1_2:75353357-75353376	None:intergenic	60.0%
	ACCCATGACGACGGTGAGAG+GGG	-	chr1_2:75353420-75353439	None:intergenic	60.0%
	CACCCATGACGACGGTGAGA+GGG	-	chr1_2:75353421-75353440	None:intergenic	60.0%
	GGAACCACCACCCATGACGA+CGG	-	chr1_2:75353429-75353448	None:intergenic	60.0%
	AGAAGGTGGCAGACCGGATG+GGG	-	chr1_2:75353454-75353473	None:intergenic	60.0%
	GAGAAGGTGGCAGACCGGAT+GGG	-	chr1_2:75353455-75353474	None:intergenic	60.0%
	GCAGAAGATGGGGGAGAAGG+TGG	-	chr1_2:75353468-75353487	None:intergenic	60.0%
	AATCCGGCGGTGAGAGTCGA+AGG	+	chr1_2:75353525-75353544	Msa0092670:CDS	60.0%
	GCGGGGCTTAGGGCAAACGA+CGG	-	chr1_2:75352775-75352794	None:intergenic	65.0%
	TTGAGGAGTCCGACACGGCG+GGG	-	chr1_2:75352792-75352811	None:intergenic	65.0%
	GTTGAGGAGTCCGACACGGC+GGG	-	chr1_2:75352793-75352812	None:intergenic	65.0%
	ACCCGAGCAGATCCTTCCGG+TGG	+	chr1_2:75352829-75352848	Msa0092670:CDS	65.0%
	GCCACCGGAAGGATCTGCTC+GGG	-	chr1_2:75352833-75352852	None:intergenic	65.0%
	GAAAAATGGGGGCGGCGACG+AGG	-	chr1_2:75353325-75353344	None:intergenic	65.0%
	GCCCCTCTCACCGTCGTCAT+GGG	+	chr1_2:75353416-75353435	Msa0092670:CDS	65.0%
	CCACCCATGACGACGGTGAG+AGG	-	chr1_2:75353422-75353441	None:intergenic	65.0%
	CCTCTCACCGTCGTCATGGG+TGG	+	chr1_2:75353419-75353438	Msa0092670:CDS	65.0%
	CTCACCGTCGTCATGGGTGG+TGG	+	chr1_2:75353422-75353441	Msa0092670:CDS	65.0%
	GTGGTGGTTCCTGCCCCATC+CGG	+	chr1_2:75353438-75353457	Msa0092670:CDS	65.0%
	GGAGAAGGTGGCAGACCGGA+TGG	-	chr1_2:75353456-75353475	None:intergenic	65.0%
	TGGGGGAGAAGGTGGCAGAC+CGG	-	chr1_2:75353460-75353479	None:intergenic	65.0%
	GCGGGGCTTAGGGCAAACGA+CGG	-	chr1_2:75352775-75352794	None:intergenic	65.0%
	TTGAGGAGTCCGACACGGCG+GGG	-	chr1_2:75352792-75352811	None:intergenic	65.0%
	GTTGAGGAGTCCGACACGGC+GGG	-	chr1_2:75352793-75352812	None:intergenic	65.0%
	ACCCGAGCAGATCCTTCCGG+TGG	+	chr1_2:75352829-75352848	Msa0092670:CDS	65.0%
	GCCACCGGAAGGATCTGCTC+GGG	-	chr1_2:75352833-75352852	None:intergenic	65.0%
	GAAAAATGGGGGCGGCGACG+AGG	-	chr1_2:75353325-75353344	None:intergenic	65.0%
	GCCCCTCTCACCGTCGTCAT+GGG	+	chr1_2:75353416-75353435	Msa0092670:CDS	65.0%
	CCACCCATGACGACGGTGAG+AGG	-	chr1_2:75353422-75353441	None:intergenic	65.0%
	CCTCTCACCGTCGTCATGGG+TGG	+	chr1_2:75353419-75353438	Msa0092670:CDS	65.0%
	CTCACCGTCGTCATGGGTGG+TGG	+	chr1_2:75353422-75353441	Msa0092670:CDS	65.0%
	GTGGTGGTTCCTGCCCCATC+CGG	+	chr1_2:75353438-75353457	Msa0092670:CDS	65.0%
	GGAGAAGGTGGCAGACCGGA+TGG	-	chr1_2:75353456-75353475	None:intergenic	65.0%
	TGGGGGAGAAGGTGGCAGAC+CGG	-	chr1_2:75353460-75353479	None:intergenic	65.0%
	TGCCCTAAGCCCCGCCGTGT+CGG	+	chr1_2:75352780-75352799	Msa0092670:CDS	70.0%
	GTCCGACACGGCGGGGCTTA+GGG	-	chr1_2:75352785-75352804	None:intergenic	70.0%
	AGTCCGACACGGCGGGGCTT+AGG	-	chr1_2:75352786-75352805	None:intergenic	70.0%
	CGCCCCTCTCACCGTCGTCA+TGG	+	chr1_2:75353415-75353434	Msa0092670:CDS	70.0%
	TGCCCTAAGCCCCGCCGTGT+CGG	+	chr1_2:75352780-75352799	Msa0092670:CDS	70.0%
	GTCCGACACGGCGGGGCTTA+GGG	-	chr1_2:75352785-75352804	None:intergenic	70.0%
	AGTCCGACACGGCGGGGCTT+AGG	-	chr1_2:75352786-75352805	None:intergenic	70.0%
	CGCCCCTCTCACCGTCGTCA+TGG	+	chr1_2:75353415-75353434	Msa0092670:CDS	70.0%
	GGCGGCGACGAGGCTACTGG+AGG	-	chr1_2:75353315-75353334	None:intergenic	75.0%
	GGTGGCAGACCGGATGGGGC+AGG	-	chr1_2:75353450-75353469	None:intergenic	75.0%
	GGCGGCGACGAGGCTACTGG+AGG	-	chr1_2:75353315-75353334	None:intergenic	75.0%
	GGTGGCAGACCGGATGGGGC+AGG	-	chr1_2:75353450-75353469	None:intergenic	75.0%
!	GGGGGCGGCGACGAGGCTAC+TGG	-	chr1_2:75353318-75353337	None:intergenic	80.0%
!	GGGGGCGGCGACGAGGCTAC+TGG	-	chr1_2:75353318-75353337	None:intergenic	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	75351838	75354104	75351838	ID=Msa0092670;Name=Msa0092670
chr1_2	mRNA	75351838	75354104	75351838	ID=Msa0092670-mRNA-1;Parent=Msa0092670;Name=Msa0092670-mRNA-1;_AED=0.16;_eAED=0.16;_QI=346\|1\|1\|1\|0.66\|0.5\|4\|502\|163
chr1_2	exon	75351838	75352147	75351838	ID=Msa0092670-mRNA-1:exon:26517;Parent=Msa0092670-mRNA-1
chr1_2	exon	75352720	75352859	75352720	ID=Msa0092670-mRNA-1:exon:26518;Parent=Msa0092670-mRNA-1
chr1_2	exon	75352960	75353026	75352960	ID=Msa0092670-mRNA-1:exon:26519;Parent=Msa0092670-mRNA-1
chr1_2	exon	75353282	75354104	75353282	ID=Msa0092670-mRNA-1:exon:26520;Parent=Msa0092670-mRNA-1
chr1_2	five_prime_UTR	75351838	75352147	75351838	ID=Msa0092670-mRNA-1:five_prime_utr;Parent=Msa0092670-mRNA-1
chr1_2	five_prime_UTR	75352720	75352755	75352720	ID=Msa0092670-mRNA-1:five_prime_utr;Parent=Msa0092670-mRNA-1
chr1_2	CDS	75352756	75352859	75352756	ID=Msa0092670-mRNA-1:cds;Parent=Msa0092670-mRNA-1
chr1_2	CDS	75352960	75353026	75352960	ID=Msa0092670-mRNA-1:cds;Parent=Msa0092670-mRNA-1
chr1_2	CDS	75353282	75353602	75353282	ID=Msa0092670-mRNA-1:cds;Parent=Msa0092670-mRNA-1
chr1_2	three_prime_UTR	75353603	75354104	75353603	ID=Msa0092670-mRNA-1:three_prime_utr;Parent=Msa0092670-mRNA-1

Gene Sequence

>Msa0092670

ATGAACGGAAGAGACTCCGTCGTTTGCCCTAAGCCCCGCCGTGTCGGACTCCTCAACTTCGCCGTCAACGACTACCCGAGCAGATCCTTCCGGTGGCATCTCAGTTGCCAAGTTGAACCGTGTGATTCAAACTCATCTGCGTCAAATCCCTTGGACACAATTCTCACCAAGGATGATGATTGTGATACGGAACAATCAAGTCCTCCAGTAGCCTCGTCGCCGCCCCCATTTTTCTGTGGGTCTCCGCCGAGCAGAGTAGCTAACCCACTAATTCAGGATGCTCGATTCGGGGATGAGAATTTCTCGCCCCTCTCACCGTCGTCATGGGTGGTGGTTCCTGCCCCATCCGGTCTGCCACCTTCTCCCCCATCTTCTGCAAGGAAGGGAGGATGTGTTCGGGCCAATTTTGGTAACAATCCGGCGGTGAGAGTCGAAGGATTCGATTGCCTTGACAGGGACAGCCGTAATTGCAGCATCCCTGCTCTGGCTTAG

Protein sequence

>Msa0092670

MNGRDSVVCPKPRRVGLLNFAVNDYPSRSFRWHLSCQVEPCDSNSSASNPLDTILTKDDDCDTEQSSPPVASSPPPFFCGSPPSRVANPLIQDARFGDENFSPLSPSSWVVVPAPSGLPPSPPSSARKGGCVRANFGNNPAVRVEGFDCLDRDSRNCSIPALA*