AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0734340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734340 MtrunA17_Chr1g0146881 48.333 120 21 1 79 157 56 175 2.08e-26 106
Msa0734340 MtrunA17_Chr1g0146881 66.234 77 20 1 1 77 118 188 1.03e-23 99.0
Msa0734340 MtrunA17_Chr5g0430901 76.923 39 8 1 207 244 820 858 3.31e-11 63.5
Msa0734340 MtrunA17_Chr5g0430341 54.839 62 24 2 206 263 458 519 5.86e-11 62.4
Msa0734340 MtrunA17_Chr5g0430441 59.016 61 21 2 207 263 915 975 5.88e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734340 AT5G53050.6 65.517 58 20 0 1 58 106 163 1.06e-18 84.3
Msa0734340 AT5G53050.6 48.611 72 34 1 112 180 118 189 1.48e-14 72.8
Msa0734340 AT5G53050.2 65.517 58 20 0 1 58 106 163 1.34e-18 85.1
Msa0734340 AT5G53050.2 48.611 72 34 1 112 180 118 189 2.41e-14 72.8
Msa0734340 AT5G53050.3 65.517 58 20 0 1 58 106 163 1.34e-18 85.1
Msa0734340 AT5G53050.3 48.611 72 34 1 112 180 118 189 2.41e-14 72.8
Msa0734340 AT5G53050.1 65.517 58 20 0 1 58 106 163 1.36e-18 84.0
Msa0734340 AT5G53050.1 48.611 72 34 1 112 180 118 189 1.58e-14 72.4
Msa0734340 AT5G53050.4 65.517 58 20 0 1 58 106 163 2.53e-18 84.3
Msa0734340 AT5G53050.4 48.611 72 34 1 112 180 118 189 2.66e-14 72.8
Msa0734340 AT5G53050.5 65.517 58 20 0 1 58 106 163 2.65e-18 83.6
Msa0734340 AT5G53050.5 48.611 72 34 1 112 180 118 189 2.07e-14 72.8

Find 292 sgRNAs with CRISPR-Local

Find 1136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAATTTGCAACCATTTC+TGG 0.040658 5_1:+48137628 Msa0734340:five_prime_UTR
CTCTTGAGGTTCTGAATATT+TGG 0.065513 5_1:+48140509 Msa0734340:five_prime_UTR
TTTAATTCATTTAAGGTATT+TGG 0.102038 5_1:+48139313 Msa0734340:five_prime_UTR
TTATTCCTTCACCGTAATTT+AGG 0.115890 5_1:-48140234 None:intergenic
CTTCAGGATTTCTCCATCTT+TGG 0.139322 5_1:-48138853 None:intergenic
TAATCCTCAATCTCTATATT+TGG 0.141084 5_1:-48140601 None:intergenic
TAGGAGGTTTAATTCATTTA+AGG 0.159583 5_1:+48139306 Msa0734340:five_prime_UTR
AGTCCTTACCAGAGCAAATT+TGG 0.179918 5_1:+48140401 Msa0734340:five_prime_UTR
GAATATTATAAAACATCTTT+TGG 0.202359 5_1:-48142469 None:intergenic
CGCCATTCAGCTACTTCATT+TGG 0.218763 5_1:-48137997 None:intergenic
AGTCCTTACCAGAGCAAAAT+TGG 0.221990 5_1:+48153651 Msa0734340:CDS
TCTTGAGGTTCTGAATATTT+GGG 0.229790 5_1:+48140510 Msa0734340:five_prime_UTR
AAGATAAGAAAATTAGAAAT+TGG 0.235826 5_1:-48137524 None:intergenic
CCCTTAGGACTCTACAGATT+TGG 0.245098 5_1:+48140437 Msa0734340:five_prime_UTR
TAAAAGATACTTGCTAGTTT+TGG 0.245648 5_1:+48138359 Msa0734340:five_prime_UTR
ATTACTTTGTTGGATCATTT+AGG 0.249536 5_1:+48141343 Msa0734340:CDS
TTCTGTGATAAATTCTATAA+TGG 0.253654 5_1:-48138274 None:intergenic
TTTAATTTCTCTTGAACTTT+GGG 0.258179 5_1:+48139856 Msa0734340:five_prime_UTR
CCTTAGGACTCTACAGATTT+GGG 0.259617 5_1:+48140438 Msa0734340:five_prime_UTR
ATCCGTCAAAGCTGGGTTAA+AGG 0.268071 5_1:-48140350 None:intergenic
TGAAGAGAACGAACGTCTTT+TGG 0.271493 5_1:+48140988 Msa0734340:five_prime_UTR
TTAGAACATTTATCCTTCTT+AGG 0.278217 5_1:-48140810 None:intergenic
TGTAAGCAAGCCAAGCGTTT+TGG 0.279728 5_1:-48139437 None:intergenic
TTGGGGATGTCCAACATTAA+AGG 0.286502 5_1:+48140528 Msa0734340:five_prime_UTR
CTGGGTTGACAGAAGATAAA+TGG 0.288286 5_1:+48138415 Msa0734340:five_prime_UTR
CGTTCGTTCTCTTCATCATT+AGG 0.289083 5_1:-48140980 None:intergenic
ATTTAATTTCTCTTGAACTT+TGG 0.289233 5_1:+48139855 Msa0734340:five_prime_UTR
TCTTCTCGTCCAAACACTTT+TGG 0.289392 5_1:-48138045 None:intergenic
TCTAAAACAAATAAATAAAA+AGG 0.294664 5_1:-48141152 None:intergenic
GGGGCAAGAATGTATGTATT+TGG 0.295576 5_1:+48139070 Msa0734340:five_prime_UTR
TTCAGGATTTCTCCATCTTT+GGG 0.299618 5_1:-48138852 None:intergenic
GGGTGGGGTCGGCAGATAAA+TGG 0.301324 5_1:+48142610 Msa0734340:CDS
ATGATGAAGAAAACGTCTTT+TGG 0.306216 5_1:+48154332 Msa0734340:CDS
AAGGATAAATGTTCTAATTC+AGG 0.319264 5_1:+48140816 Msa0734340:five_prime_UTR
GCTGAATCAATTCTTCCTTC+AGG 0.319642 5_1:-48138869 None:intergenic
AGACATGGCAGTCCAAGTTT+AGG 0.319656 5_1:-48140124 None:intergenic
TATTCCTTCACCGTAATTTA+GGG 0.319937 5_1:-48140233 None:intergenic
ATTCAGCTTTGGATGGCTAA+TGG 0.323219 5_1:+48138885 Msa0734340:five_prime_UTR
ATCACGAGTGGATACTAAAA+TGG 0.323841 5_1:-48138481 None:intergenic
AGTACAAAGCTTGTGAAAAT+AGG 0.324832 5_1:+48138618 Msa0734340:five_prime_UTR
CTTTCTTATTACACTGTTGT+TGG 0.331224 5_1:+48145849 Msa0734340:CDS
GGATCATTTAGGTTCGAAAA+AGG 0.331776 5_1:+48143020 Msa0734340:intron
CCCAACATACCTTTCTCTTC+GGG 0.346235 5_1:+48139250 Msa0734340:five_prime_UTR
AGCCACAGACTGCTCTATTA+AGG 0.347389 5_1:+48137729 Msa0734340:five_prime_UTR
TCCCAACATACCTTTCTCTT+CGG 0.350547 5_1:+48139249 Msa0734340:five_prime_UTR
TTCAATAACCCCTCTATGTT+TGG 0.353100 5_1:-48140046 None:intergenic
GCCATTCAGCTACTTCATTT+GGG 0.354201 5_1:-48137996 None:intergenic
AAGACGTTCTCTTCATCATT+AGG 0.354386 5_1:-48142652 None:intergenic
CTTTGATTTGATTCCAGAAA+TGG 0.355798 5_1:-48137641 None:intergenic
AGCAAAATGGATGAATATTC+TGG 0.356266 5_1:+48138993 Msa0734340:five_prime_UTR
GCTGGGTTAAAGGGTTCATT+TGG 0.357921 5_1:-48140340 None:intergenic
TCAAGGATTGCGATGCTTGC+CGG 0.360958 5_1:+48140465 Msa0734340:five_prime_UTR
AATTAAAGATAGTGAGCTTT+GGG 0.366773 5_1:+48138737 Msa0734340:five_prime_UTR
AACAAAGTAATTGCATCCTT+TGG 0.369295 5_1:-48141331 None:intergenic
ATTACTGAACCAAAAGTGTT+TGG 0.370947 5_1:+48138036 Msa0734340:five_prime_UTR
AATTTAGAGGTTGAAGATGT+TGG 0.373707 5_1:+48138924 Msa0734340:five_prime_UTR
GCCCCAACTATTACTAGTGC+TGG 0.377746 5_1:+48139731 Msa0734340:five_prime_UTR
ATCAAGTCTGGTAGACTTAG+AGG 0.378634 5_1:+48137814 Msa0734340:five_prime_UTR
GATCTCGCTCAATCAGTAAT+GGG 0.378875 5_1:+48139050 Msa0734340:five_prime_UTR
GGATCATTTAGGTTGCAAAA+AGG 0.380836 5_1:+48141354 Msa0734340:CDS
AAAGGATGCAATTACTTTGT+TGG 0.381993 5_1:+48141333 Msa0734340:CDS
TCCAAGGAGAGAACTCTATC+AGG 0.383996 5_1:-48141579 None:intergenic
AGAGGGAACAGGGGAGGATT+GGG 0.384073 5_1:+48140561 Msa0734340:five_prime_UTR
AACGGCTTTGATCATATCTA+AGG 0.385653 5_1:-48137683 None:intergenic
TATTGCAAAGAGGAATTTAG+AGG 0.387795 5_1:+48138911 Msa0734340:five_prime_UTR
TAAAGGATTGCGATGCTTGC+CGG 0.389174 5_1:+48153715 Msa0734340:CDS
CGGCAGATAAATGGATTAAC+TGG 0.389659 5_1:+48142619 Msa0734340:CDS
GAACGATGCAAAGAGGGAAC+AGG 0.395421 5_1:+48140550 Msa0734340:five_prime_UTR
TTGTTCAAACAATATGCATT+TGG 0.400696 5_1:+48138579 Msa0734340:five_prime_UTR
TGGGAAACTCACCGTTTATC+TGG 0.403119 5_1:+48138531 Msa0734340:five_prime_UTR
GCCCAGCACTAGTAATAGTT+GGG 0.407737 5_1:-48139733 None:intergenic
GTCCTTACCAGAGCAAATTT+GGG 0.409233 5_1:+48140402 Msa0734340:five_prime_UTR
AAGAGGGAACAGGGGAGGAT+TGG 0.409457 5_1:+48140560 Msa0734340:five_prime_UTR
AAATTAAAGATAGTGAGCTT+TGG 0.410651 5_1:+48138736 Msa0734340:five_prime_UTR
TTTAGGTTGTAAATTGAGTC+AGG 0.413864 5_1:-48139365 None:intergenic
ATCATTAGGTACGTTTGTTC+CGG 0.415070 5_1:-48154314 None:intergenic
AGGAAGAATTGATTCAGCTT+TGG 0.416256 5_1:+48138874 Msa0734340:five_prime_UTR
TAGTGATGGCATATGGATAA+AGG 0.417201 5_1:-48139285 None:intergenic
GACATGGCAGTCCAAGTTTA+GGG 0.417611 5_1:-48140123 None:intergenic
AGGAGGGTACTGGAACTGTT+CGG 0.418186 5_1:+48137968 Msa0734340:five_prime_UTR
ATTGTGCGGCTTCCGTTACT+TGG 0.418690 5_1:+48139890 Msa0734340:five_prime_UTR
TTCGCCATGAGATCGGTAAC+AGG 0.420714 5_1:+48137884 Msa0734340:five_prime_UTR
ACAGAGATTGAAGAGAAGTA+AGG 0.421576 5_1:-48140285 None:intergenic
ACCCTTTAACCCAGCTTTGA+CGG 0.421638 5_1:+48140348 Msa0734340:five_prime_UTR
TGTGCTATATTTCCCAAAGA+TGG 0.423905 5_1:+48138840 Msa0734340:five_prime_UTR
CCTCTTGCAGCGAAAGCATT+GGG 0.425171 5_1:+48138672 Msa0734340:five_prime_UTR
GGCAAGGAGAGAACTCTATC+AGG 0.425296 5_1:-48143241 None:intergenic
TTGGATTTGCTATATGCAAC+AGG 0.425697 5_1:+48141597 Msa0734340:CDS
TTGTGTTTCTGAGAATTTCT+CGG 0.427827 5_1:+48138233 Msa0734340:five_prime_UTR
ATCCGCAGATCCGTCAAAGC+TGG 0.429134 5_1:-48140358 None:intergenic
ATCGAATATTGCCCTAAACT+TGG 0.430933 5_1:+48140112 Msa0734340:five_prime_UTR
TACATTGTTAGTTTAGAGAA+AGG 0.432208 5_1:+48139554 Msa0734340:five_prime_UTR
TTGCTAAATGCAACGGGTCG+AGG 0.432655 5_1:+48143265 Msa0734340:CDS
GGAGGGTACTGGAACTGTTC+GGG 0.433594 5_1:+48137969 Msa0734340:five_prime_UTR
ATCATTAGGTACGTTTGTTA+CGG 0.436660 5_1:-48140966 None:intergenic
TCCGTCAAAGCTGGGTTAAA+GGG 0.437291 5_1:-48140349 None:intergenic
TCCTGATAGAGTTCTCTCCT+TGG 0.438886 5_1:+48141578 Msa0734340:CDS
TTGGAAATAAATTACTATGA+AGG 0.442231 5_1:+48139797 Msa0734340:five_prime_UTR
TTGCCTTTGCTAAATGCAAC+GGG 0.444970 5_1:+48143259 Msa0734340:CDS
TTGCATCGTTCCTTTAATGT+TGG 0.445869 5_1:-48140538 None:intergenic
AACCTCCTAGTGATGGCATA+TGG 0.450153 5_1:-48139292 None:intergenic
AACAGGTTGAAAGAGATTAC+AGG 0.450824 5_1:+48137901 Msa0734340:five_prime_UTR
AAAATGAACAATTGGAATCT+GGG 0.451587 5_1:+48138397 Msa0734340:five_prime_UTR
ATTTAAATGCAACACAGAAA+AGG 0.452902 5_1:+48138316 Msa0734340:five_prime_UTR
GTTAATCCCTTGTGTGTTGA+AGG 0.456409 5_1:-48140944 None:intergenic
CCCGAAGAGAAAGGTATGTT+GGG 0.458292 5_1:-48139250 None:intergenic
TCTCTCATGTTTCCTAACAT+TGG 0.460140 5_1:+48139500 Msa0734340:five_prime_UTR
ACTCAGCTTACCCTAAATTA+CGG 0.461548 5_1:+48140223 Msa0734340:five_prime_UTR
AGCTCAAGCGGCTAATTTGA+AGG 0.464557 5_1:+48139661 Msa0734340:five_prime_UTR
CACATTGCATTTATTCTCAA+AGG 0.464780 5_1:+48137467 Msa0734340:five_prime_UTR
GAAAGAGATTACAGGGAGGT+TGG 0.466350 5_1:+48137909 Msa0734340:five_prime_UTR
TTTAAATGCAACACAGAAAA+GGG 0.466877 5_1:+48138317 Msa0734340:five_prime_UTR
TATTCCAAATATAGAGATTG+AGG 0.471569 5_1:+48140597 Msa0734340:five_prime_UTR
TGAAAACATGCAGGCGATGA+TGG 0.472031 5_1:+48144383 Msa0734340:intron
GCCTCTTGCAGCGAAAGCAT+TGG 0.473093 5_1:+48138671 Msa0734340:five_prime_UTR
GGTGGAAAACTGCGTATTGA+AGG 0.473488 5_1:+48139611 Msa0734340:five_prime_UTR
TGCCCAGCACTAGTAATAGT+TGG 0.474581 5_1:-48139734 None:intergenic
AAGATGTTGGAAACATGGTT+TGG 0.474949 5_1:+48138937 Msa0734340:five_prime_UTR
AGACCTTCCCAAATTTGCTC+TGG 0.477466 5_1:-48140409 None:intergenic
GTCTCTCTGATGATGAATGC+TGG 0.477674 5_1:+48138553 Msa0734340:five_prime_UTR
CGACAAATGACAGGATTAAC+CGG 0.478811 5_1:+48154295 Msa0734340:CDS
ACCCGAAGAGAAAGGTATGT+TGG 0.479375 5_1:-48139251 None:intergenic
AAGGATTATCATTACCAAGT+TGG 0.480075 5_1:+48139816 Msa0734340:five_prime_UTR
TTCATGAATTATGTTTGTCA+TGG 0.480408 5_1:+48139696 Msa0734340:five_prime_UTR
AGGCAAAATTTCTTGCGGTA+AGG 0.480514 5_1:-48138760 None:intergenic
CTTGGATGATGATGAATCTC+AGG 0.480985 5_1:+48139967 Msa0734340:five_prime_UTR
GGGAAGGTCTTCAATCCCTT+AGG 0.482618 5_1:+48140422 Msa0734340:five_prime_UTR
CATGTATAATCTGAAATACT+TGG 0.487138 5_1:+48139949 Msa0734340:five_prime_UTR
ATTGAAGGCTTAAAATATGT+TGG 0.487359 5_1:+48139626 Msa0734340:five_prime_UTR
CTGAAAGTGCTGGATGTAAC+GGG 0.489118 5_1:+48140154 Msa0734340:five_prime_UTR
TCTGTGTTGCATTTAAATTG+AGG 0.489762 5_1:-48138311 None:intergenic
GTCCTTACCAGAGCAAAATT+GGG 0.490405 5_1:+48153652 Msa0734340:CDS
AGCTTGTAAAATAGCAGAAA+CGG 0.491405 5_1:+48143216 Msa0734340:CDS
TTCCCAAATTTGCTCTGGTA+AGG 0.492139 5_1:-48140404 None:intergenic
CTTGCCTTTGCTAAATGCAA+CGG 0.492442 5_1:+48143258 Msa0734340:CDS
TCACTCAAATCTCAAGTGCT+TGG 0.492571 5_1:+48139778 Msa0734340:five_prime_UTR
GATGAGTGTTCGATCAAGTC+TGG 0.492576 5_1:+48137802 Msa0734340:five_prime_UTR
GGAGAAGGTGACAATGAGTC+TGG 0.493657 5_1:+48142682 Msa0734340:CDS
TGGTTCAGTAATAATAGCAC+TGG 0.493714 5_1:-48138025 None:intergenic
CATAGAGGGGTTATTGAAAG+TGG 0.493866 5_1:+48140051 Msa0734340:five_prime_UTR
ATTATCAAAACTAAGTAAAG+AGG 0.494099 5_1:-48141206 None:intergenic
TTACTGATTGAGCGAGATCA+TGG 0.494813 5_1:-48139046 None:intergenic
TTGATGATCAGACTTGCTAC+TGG 0.496294 5_1:-48141093 None:intergenic
CCTCTCACGTCTCTTGACTT+TGG 0.497472 5_1:+48144828 Msa0734340:CDS
GAGTTGTCGTGTGGATCAAA+AGG 0.498020 5_1:+48138453 Msa0734340:five_prime_UTR
TTTGAAAGCATTCTTATCAA+AGG 0.500798 5_1:-48139162 None:intergenic
GATGGTGTATAAGGCAGATA+AGG 0.502738 5_1:-48140642 None:intergenic
ACATTGTTAGTTTAGAGAAA+GGG 0.504774 5_1:+48139555 Msa0734340:five_prime_UTR
TGTTGGAAACATGGTTTGGA+AGG 0.510148 5_1:+48138941 Msa0734340:five_prime_UTR
GGTTGAAGATGTTGGAAACA+TGG 0.510717 5_1:+48138932 Msa0734340:five_prime_UTR
TCTTCCATCTCTGAAAGTGC+TGG 0.511154 5_1:+48140144 Msa0734340:five_prime_UTR
CTTCTCAGCATCTTCAAGAA+CGG 0.512383 5_1:-48137701 None:intergenic
TGATCTCGCTCAATCAGTAA+TGG 0.513596 5_1:+48139049 Msa0734340:five_prime_UTR
CTATGTCTTCGTGAGTGTAA+AGG 0.514942 5_1:+48153698 Msa0734340:CDS
CATCAGAGAGACCAGATAAA+CGG 0.515444 5_1:-48138542 None:intergenic
CTTGAGGTTCTGAATATTTG+GGG 0.515629 5_1:+48140511 Msa0734340:five_prime_UTR
CTAAGAATAATTATCCAACT+TGG 0.517401 5_1:-48139830 None:intergenic
AAAATGGCCGACGCTTTGCT+CGG 0.517485 5_1:+48137571 Msa0734340:five_prime_UTR
TCGACACCTCACTTCTCTTG+AGG 0.520880 5_1:+48140495 Msa0734340:five_prime_UTR
GGTTATTGAAAGTGGAAAGA+GGG 0.521462 5_1:+48140059 Msa0734340:five_prime_UTR
CTACAGATTTGGGGTTGTCA+AGG 0.521678 5_1:+48140448 Msa0734340:five_prime_UTR
TCGACACACAGGGGTGGGGT+CGG 0.524559 5_1:+48142599 Msa0734340:intron
CCCAAATCTGTAGAGTCCTA+AGG 0.526267 5_1:-48140438 None:intergenic
GAGGTTGTTGCAACAATCAC+AGG 0.528156 5_1:+48138504 Msa0734340:five_prime_UTR
CCCAATGCTTTCGCTGCAAG+AGG 0.529172 5_1:-48138672 None:intergenic
TTTGAATGTAATTATTGGGT+TGG 0.530111 5_1:+48141249 Msa0734340:five_prime_UTR
CTAAAGTTTCGCCATGAGAT+CGG 0.532989 5_1:+48137877 Msa0734340:five_prime_UTR
AGAATAAATGCAATGTGAGT+AGG 0.533160 5_1:-48137461 None:intergenic
GGGTTATTGAAAGTGGAAAG+AGG 0.533192 5_1:+48140058 Msa0734340:five_prime_UTR
TCTGAAAGTGCTGGATGTAA+CGG 0.534821 5_1:+48140153 Msa0734340:five_prime_UTR
CAGTTTATCTGAAGCTCAAG+CGG 0.537266 5_1:+48139649 Msa0734340:five_prime_UTR
CTATAATTTCACAAAACTGA+AGG 0.537362 5_1:+48140312 Msa0734340:five_prime_UTR
TTTGAACATCCCCTCTGGGA+AGG 0.538226 5_1:-48140260 None:intergenic
AAGTAACTCAACCTCAAAGC+AGG 0.540912 5_1:-48138780 None:intergenic
CGATTCCTACCAAACATAGA+GGG 0.541142 5_1:+48140037 Msa0734340:five_prime_UTR
GAAGTCGGAGTCCTTCGCTT+GGG 0.541566 5_1:-48138100 None:intergenic
TGATGAATCTCAGGATGGTA+TGG 0.541660 5_1:+48139976 Msa0734340:five_prime_UTR
ACGATTCCTACCAAACATAG+AGG 0.541882 5_1:+48140036 Msa0734340:five_prime_UTR
ATCAGACTTGCTACTGGGCA+CGG 0.543216 5_1:-48141087 None:intergenic
ATTAAAGGAACGATGCAAAG+AGG 0.543603 5_1:+48140543 Msa0734340:five_prime_UTR
AGAATTGATTCAGCTTTGGA+TGG 0.543664 5_1:+48138878 Msa0734340:five_prime_UTR
CAGACTGCTCTATTAAGGTA+TGG 0.545127 5_1:+48137734 Msa0734340:five_prime_UTR
AATTCGAGTACCTCCAGAGA+TGG 0.545991 5_1:-48140013 None:intergenic
GCTTTCGACACACAGGGGTG+GGG 0.547007 5_1:+48142595 Msa0734340:intron
ATAACCCCTCTATGTTTGGT+AGG 0.548355 5_1:-48140042 None:intergenic
CTCAGGATGGTATGGAGGTG+AGG 0.548467 5_1:+48139984 Msa0734340:five_prime_UTR
CAAGTCCGTTGGCGGTATCG+AGG 0.549031 5_1:+48141028 Msa0734340:five_prime_UTR
TCAACCTGTTACCGATCTCA+TGG 0.550128 5_1:-48137888 None:intergenic
ATGGTGTATAAGGCAGATAA+GGG 0.555960 5_1:-48140641 None:intergenic
GAGTTGTCTCCCAAAACGCT+TGG 0.556321 5_1:+48139427 Msa0734340:five_prime_UTR
AGCTTGTAAAATAGCAGCAA+TGG 0.557695 5_1:+48141554 Msa0734340:CDS
TCCGCAGATCCGTCAAAGCT+GGG 0.561028 5_1:-48140357 None:intergenic
TTGCAACAATCACAGGAACA+TGG 0.562079 5_1:+48138511 Msa0734340:five_prime_UTR
GATCTCTGATTGTAATGAGT+TGG 0.562745 5_1:+48140378 Msa0734340:five_prime_UTR
CCCCAACTATTACTAGTGCT+GGG 0.562919 5_1:+48139732 Msa0734340:five_prime_UTR
GGAAGTCGGAGTCCTTCGCT+TGG 0.563505 5_1:-48138101 None:intergenic
TGGGAGGTTTAATGAGCTCA+AGG 0.565448 5_1:+48138691 Msa0734340:five_prime_UTR
TGAATTAAACCTCCTAGTGA+TGG 0.566506 5_1:-48139299 None:intergenic
TGCGTAAAACCCGAAGAGAA+AGG 0.568512 5_1:-48139259 None:intergenic
CCAAATCTGTAGAGTCCTAA+GGG 0.569357 5_1:-48140437 None:intergenic
ACATCCAGCACTTTCAGAGA+TGG 0.570468 5_1:-48140148 None:intergenic
GGTGACAACAAGTCCGTTGG+CGG 0.571244 5_1:+48141020 Msa0734340:five_prime_UTR
TGGATGATATTGCTGAAAGG+AGG 0.571897 5_1:+48137929 Msa0734340:five_prime_UTR
TGAGTAGGAAGTCAGCAAGT+AGG 0.575334 5_1:-48137446 None:intergenic
GAGCTCAAGGAATGAAGAAG+AGG 0.578163 5_1:+48138704 Msa0734340:five_prime_UTR
GCCCAAATGAAGTAGCTGAA+TGG 0.579751 5_1:+48137995 Msa0734340:five_prime_UTR
AACGATGCAAAGAGGGAACA+GGG 0.580901 5_1:+48140551 Msa0734340:five_prime_UTR
ATTCGAGTACCTCCAGAGAT+GGG 0.581028 5_1:-48140012 None:intergenic
TCAGGATGGTATGGAGGTGA+GGG 0.582271 5_1:+48139985 Msa0734340:five_prime_UTR
CATTTCTGGAATCAAATCAA+AGG 0.582459 5_1:+48137642 Msa0734340:five_prime_UTR
GTTTCTTGTCACCCAAGCGA+AGG 0.582652 5_1:+48138089 Msa0734340:five_prime_UTR
TGTCATAGATATGAAGTGTT+GGG 0.583791 5_1:+48141290 Msa0734340:five_prime_UTR
CGTTGCATTTAGCAAAGGCA+AGG 0.586998 5_1:-48143257 None:intergenic
CTTAGGACTCTACAGATTTG+GGG 0.587687 5_1:+48140439 Msa0734340:five_prime_UTR
TTTAGTATCCACTCGTGATG+AGG 0.587780 5_1:+48138485 Msa0734340:five_prime_UTR
GGGTCAGGTCGACAAATGAC+AGG 0.588837 5_1:+48154286 Msa0734340:intron
CAAGGAATGAAGAAGAGGAA+TGG 0.589213 5_1:+48138709 Msa0734340:five_prime_UTR
GGAAACATGAGAGACAAAGA+TGG 0.590419 5_1:-48139491 None:intergenic
ACTTGATCGAACACTCATCA+AGG 0.590558 5_1:-48137798 None:intergenic
ACCCAGCTTTGACGGATCTG+CGG 0.591493 5_1:+48140356 Msa0734340:five_prime_UTR
AAAGCTTGTGAAAATAGGAA+AGG 0.591595 5_1:+48138623 Msa0734340:five_prime_UTR
GAGATCGTAAAGAAATGCAA+TGG 0.594191 5_1:+48138645 Msa0734340:five_prime_UTR
GAATGAGTGCTGAACTATGC+AGG 0.594519 5_1:-48137493 None:intergenic
CTAATGGATTTATTGCAAAG+AGG 0.596106 5_1:+48138901 Msa0734340:five_prime_UTR
CGACCCGTTGCATTTAGCAA+AGG 0.598007 5_1:-48143262 None:intergenic
TTAAAGGAACGATGCAAAGA+GGG 0.598894 5_1:+48140544 Msa0734340:five_prime_UTR
AGGTCAATCTCTACCTTCCG+TGG 0.599774 5_1:+48140196 Msa0734340:five_prime_UTR
TGATGATCAGACTTGCTACT+GGG 0.599837 5_1:-48141092 None:intergenic
CTTACCCTAAATTACGGTGA+AGG 0.600305 5_1:+48140229 Msa0734340:five_prime_UTR
AGGATTGCCTTCAACACACA+AGG 0.601174 5_1:+48140937 Msa0734340:intron
AGTAGCAAGTCTGATCATCA+AGG 0.603717 5_1:+48141095 Msa0734340:five_prime_UTR
TTTATCCATATGCCATCACT+AGG 0.604046 5_1:+48139287 Msa0734340:five_prime_UTR
TGCAACAATCACAGGAACAT+GGG 0.605310 5_1:+48138512 Msa0734340:five_prime_UTR
GCTCAAGCGGCTAATTTGAA+GGG 0.606829 5_1:+48139662 Msa0734340:five_prime_UTR
GGAATAGATGGAAAGGAAGT+CGG 0.607882 5_1:-48138115 None:intergenic
GATGGTAGTTTACCAAGTAA+CGG 0.609201 5_1:-48139902 None:intergenic
ATCCATATGCCATCACTAGG+AGG 0.609923 5_1:+48139290 Msa0734340:five_prime_UTR
ACAGGTTGAAAGAGATTACA+GGG 0.612024 5_1:+48137902 Msa0734340:five_prime_UTR
TTACCAGAGCAAATTTGGGA+AGG 0.612152 5_1:+48140406 Msa0734340:five_prime_UTR
CACGAAGACATAGATATCGA+AGG 0.613309 5_1:-48153688 None:intergenic
ATGTCATAGATATGAAGTGT+TGG 0.614019 5_1:+48141289 Msa0734340:five_prime_UTR
AGAGGTGACAACAAGTCCGT+TGG 0.614887 5_1:+48141017 Msa0734340:five_prime_UTR
GTTATTGAAAGTGGAAAGAG+GGG 0.618752 5_1:+48140060 Msa0734340:five_prime_UTR
CTTGCAGCGAAAGCATTGGG+AGG 0.620397 5_1:+48138675 Msa0734340:five_prime_UTR
GTGAGGTGTCGAATACCCTC+CGG 0.623261 5_1:-48140484 None:intergenic
AAGCTGAGTAAGACCACGGA+AGG 0.623551 5_1:-48140209 None:intergenic
AGGATTGCGATGCTTGCCGG+AGG 0.625554 5_1:+48140468 Msa0734340:five_prime_UTR
CCAAAGTCAAGAGACGTGAG+AGG 0.626770 5_1:-48144828 None:intergenic
GTTGGAACATATATTGAGTG+AGG 0.627463 5_1:+48145867 Msa0734340:CDS
AGGATTGCGATGCTTGCCGG+AGG 0.627574 5_1:+48153718 Msa0734340:CDS
GGAATAACATCCTTCCCAGA+GGG 0.628233 5_1:+48140250 Msa0734340:five_prime_UTR
AGAGGAGGTGACAGTGAGTG+CGG 0.629439 5_1:+48154358 Msa0734340:CDS
ACTTTCAGAGATGGAAGACA+TGG 0.632862 5_1:-48140139 None:intergenic
CACAACTCCGAGCAAAGCGT+CGG 0.633515 5_1:-48137578 None:intergenic
ACGAAGACATAGATATCGAA+GGG 0.634356 5_1:-48153687 None:intergenic
AAAGCAGGCAAAATTTCTTG+CGG 0.636281 5_1:-48138765 None:intergenic
CAAAGATGGAGAAATCCTGA+AGG 0.636940 5_1:+48138854 Msa0734340:five_prime_UTR
AAAGAGAAAGTCACATAACA+AGG 0.638639 5_1:-48144854 None:intergenic
CCCAGCACTAGTAATAGTTG+GGG 0.638720 5_1:-48139732 None:intergenic
CAGAACAAAGATCATGCCAA+AGG 0.640479 5_1:+48141315 Msa0734340:exon
TTACCAGAGCAAAATTGGGA+AGG 0.642714 5_1:+48153656 Msa0734340:CDS
TGTTGCATATAGCAAATCCA+AGG 0.644466 5_1:-48141595 None:intergenic
ATGCAAAGAGGGAACAGGGG+AGG 0.644478 5_1:+48140555 Msa0734340:five_prime_UTR
ATCTCGCTCAATCAGTAATG+GGG 0.648070 5_1:+48139051 Msa0734340:five_prime_UTR
GGGATTGTAACAAAATTGTG+CGG 0.649266 5_1:+48139876 Msa0734340:five_prime_UTR
AGGAATAACATCCTTCCCAG+AGG 0.649798 5_1:+48140249 Msa0734340:five_prime_UTR
TGCAACAACCTCATCACGAG+TGG 0.650227 5_1:-48138493 None:intergenic
AGGGTGCAAGAATTATTGCA+AGG 0.654339 5_1:+48138336 Msa0734340:five_prime_UTR
GGTTGGATGATATTGCTGAA+AGG 0.654828 5_1:+48137926 Msa0734340:five_prime_UTR
ACGATGCAAAGAGGGAACAG+GGG 0.655349 5_1:+48140552 Msa0734340:five_prime_UTR
GGATTGCGATGCTTGCCGGA+GGG 0.658497 5_1:+48140469 Msa0734340:five_prime_UTR
CTCATGGCGAAACTTTAGAG+AGG 0.658974 5_1:-48137872 None:intergenic
GGATTGCGATGCTTGCCGGA+GGG 0.660517 5_1:+48153719 Msa0734340:CDS
GATTCCTACCAAACATAGAG+GGG 0.665812 5_1:+48140038 Msa0734340:five_prime_UTR
ATTGTCAACTTAGAAAGACA+AGG 0.667167 5_1:-48140091 None:intergenic
GATTTGCTATATGCAACAGG+TGG 0.670050 5_1:+48141600 Msa0734340:CDS
GCAATCCTCGATACCGCCAA+CGG 0.670975 5_1:-48141033 None:intergenic
AAGCACTTGAGATTTGAGTG+AGG 0.687321 5_1:-48139776 None:intergenic
GAGTTACGTGATCTAAACCT+CGG 0.691501 5_1:+48139590 Msa0734340:five_prime_UTR
GGATTGCCTTCAACACACAA+GGG 0.692096 5_1:+48140938 Msa0734340:intron
CTTTGTAGTCAAAACCGATG+TGG 0.694031 5_1:-48139130 None:intergenic
TCAGAACCTCAAGAGAAGTG+AGG 0.695699 5_1:-48140501 None:intergenic
TACCTTAATAGAGCAGTCTG+TGG 0.696108 5_1:-48137731 None:intergenic
GATGATGATGAATCTCAGGA+TGG 0.696516 5_1:+48139971 Msa0734340:five_prime_UTR
GGGTAAGCTGAGTAAGACCA+CGG 0.704413 5_1:-48140213 None:intergenic
GAATAACATCCTTCCCAGAG+GGG 0.705785 5_1:+48140251 Msa0734340:five_prime_UTR
GATGTAACAACGAGTTACTG+AGG 0.708776 5_1:+48140176 Msa0734340:five_prime_UTR
TGAATCTCAGGATGGTATGG+AGG 0.716367 5_1:+48139979 Msa0734340:five_prime_UTR
TTACGTGATCTAAACCTCGG+TGG 0.718994 5_1:+48139593 Msa0734340:five_prime_UTR
GAAGGTGACAATGAGTCTGG+TGG 0.735906 5_1:+48142685 Msa0734340:CDS
GGAGGTGACAGTGAGTGCGG+TGG 0.738750 5_1:+48154361 Msa0734340:CDS
GGTTGAAAGAGATTACAGGG+AGG 0.826032 5_1:+48137905 Msa0734340:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTTTTCAAAAAAAAAAA+TGG + chr5_1:48137555-48137574 Msa0734340:five_prime_UTR 10.0%
!!! TCTAAAACAAATAAATAAAA+AGG - chr5_1:48141155-48141174 None:intergenic 10.0%
!!! AATATTATAAAACATCTTTT+GGG - chr5_1:48142471-48142490 None:intergenic 10.0%
!! GAAATTAAAAAAATTAAACT+AGG - chr5_1:48142517-48142536 None:intergenic 10.0%
!! TATTTAAATTATATGTTGTT+TGG + chr5_1:48141180-48141199 Msa0734340:five_prime_UTR 10.0%
!! ATTTAAATTAGAAAGTAATA+TGG - chr5_1:48143798-48143817 None:intergenic 10.0%
!! AATATGTGTTAAAATATTAT+AGG - chr5_1:48144333-48144352 None:intergenic 10.0%
!! TTATTCATACTAAAAAAAAA+TGG + chr5_1:48146236-48146255 Msa0734340:intron 10.0%
!! AAAAATTGTTTATAAGAAAT+TGG + chr5_1:48146497-48146516 Msa0734340:intron 10.0%
!! TAATTATATGAATTTATACA+CGG - chr5_1:48146958-48146977 None:intergenic 10.0%
!! AATTATTAAGAAAATAAGTA+AGG - chr5_1:48147278-48147297 None:intergenic 10.0%
!!! TTTACTTTTTTTTTTTTTTG+TGG - chr5_1:48147611-48147630 None:intergenic 10.0%
!!! TTAATTTATTTTTCTTTGAT+TGG - chr5_1:48147975-48147994 None:intergenic 10.0%
!! TATTCAAAAATATATAGATT+TGG + chr5_1:48149253-48149272 Msa0734340:intron 10.0%
!!! AAAATAATAATAGCTTTTTT+AGG + chr5_1:48149785-48149804 Msa0734340:intron 10.0%
!!! AAATAATAATAGCTTTTTTA+GGG + chr5_1:48149786-48149805 Msa0734340:intron 10.0%
!! AATTCACAAAATTAAATTAA+AGG + chr5_1:48150250-48150269 Msa0734340:intron 10.0%
!!! TATGTAATTTTTTTTTTATC+AGG - chr5_1:48150297-48150316 None:intergenic 10.0%
!! AAGATAAGAAAATTAGAAAT+TGG - chr5_1:48137527-48137546 None:intergenic 15.0%
!!! ACAATTTTAATACTAAAGTT+TGG + chr5_1:48138208-48138227 Msa0734340:five_prime_UTR 15.0%
!!! CAATTTTAATACTAAAGTTT+GGG + chr5_1:48138209-48138228 Msa0734340:five_prime_UTR 15.0%
!!! TTTAATTCATTTAAGGTATT+TGG + chr5_1:48139313-48139332 Msa0734340:five_prime_UTR 15.0%
!! CAAAAACTTAAGAATTAAAA+TGG - chr5_1:48141127-48141146 None:intergenic 15.0%
!!! TTTAATTCTTAAGTTTTTGT+TGG + chr5_1:48141128-48141147 Msa0734340:five_prime_UTR 15.0%
!!! AAGTTTTTGAATGTAATTAT+TGG + chr5_1:48141244-48141263 Msa0734340:five_prime_UTR 15.0%
!!! AGTTTTTGAATGTAATTATT+GGG + chr5_1:48141245-48141264 Msa0734340:five_prime_UTR 15.0%
!!! TTTGATTTAGTTAAAATTCA+TGG + chr5_1:48141447-48141466 Msa0734340:intron 15.0%
!! TTGATTTAGTTAAAATTCAT+GGG + chr5_1:48141448-48141467 Msa0734340:intron 15.0%
!! CATTTCATAGAATTATAAAA+GGG - chr5_1:48141656-48141675 None:intergenic 15.0%
!! ACATTTCATAGAATTATAAA+AGG - chr5_1:48141657-48141676 None:intergenic 15.0%
!! GTTAAAATTAGAAAGTAATA+TGG - chr5_1:48142138-48142157 None:intergenic 15.0%
!! ATTAATTAATCACATAAGAA+GGG - chr5_1:48142361-48142380 None:intergenic 15.0%
!! AATTAATTAATCACATAAGA+AGG - chr5_1:48142362-48142381 None:intergenic 15.0%
!! TCATTATATATTCTCATTAT+AGG + chr5_1:48142403-48142422 Msa0734340:intron 15.0%
!!! ATATTATAAAACATCTTTTG+GGG - chr5_1:48142470-48142489 None:intergenic 15.0%
!!! GAATATTATAAAACATCTTT+TGG - chr5_1:48142472-48142491 None:intergenic 15.0%
!!! GTTTTATAATATTCTAATTC+AGG + chr5_1:48142478-48142497 Msa0734340:CDS 15.0%
!! AATGAAATCAAAAATCAAAA+AGG - chr5_1:48142539-48142558 None:intergenic 15.0%
!! CAAAAACTTAAGAATAAAAA+TGG - chr5_1:48142784-48142803 None:intergenic 15.0%
!!! TTTTATTCTTAAGTTTTTGT+TGG + chr5_1:48142785-48142804 Msa0734340:intron 15.0%
!!! AGTTGAAAATTATCTTTTTA+TGG + chr5_1:48143522-48143541 Msa0734340:intron 15.0%
!! TAATTTAAATTTCTATATGC+AGG + chr5_1:48143808-48143827 Msa0734340:intron 15.0%
!! TAAAAAAAAATAAAGATGGA+GGG - chr5_1:48144754-48144773 None:intergenic 15.0%
!! ACAGTAAAAAAAAATAAAGA+TGG - chr5_1:48144758-48144777 None:intergenic 15.0%
!! ATATTTGATATTAGACAAAT+CGG - chr5_1:48145094-48145113 None:intergenic 15.0%
!! GAAATATAATCTTAGAAAAA+TGG - chr5_1:48145618-48145637 None:intergenic 15.0%
!! AGTAAAATGAGAAAATAATA+TGG - chr5_1:48145811-48145830 None:intergenic 15.0%
!!! GTTTTGTATTTTATTTTGTT+AGG + chr5_1:48147202-48147221 Msa0734340:intron 15.0%
!! ATGAATTAATAAATTGTGAA+AGG + chr5_1:48147334-48147353 Msa0734340:intron 15.0%
!! AAAATGACAACTAAAAATAA+AGG + chr5_1:48147442-48147461 Msa0734340:intron 15.0%
!! AAATGACAACTAAAAATAAA+GGG + chr5_1:48147443-48147462 Msa0734340:intron 15.0%
!! ATAAGAATTTAGTTAAATGT+TGG + chr5_1:48147486-48147505 Msa0734340:intron 15.0%
!! ATTCATAATATTAACATGTT+CGG - chr5_1:48147792-48147811 None:intergenic 15.0%
!! TTAATATTATGAATTGCTTT+GGG + chr5_1:48147798-48147817 Msa0734340:intron 15.0%
!! ATGAAATTAATATTGTTACA+TGG - chr5_1:48148333-48148352 None:intergenic 15.0%
!! CATAAAAAAAATAAATCAAG+AGG - chr5_1:48149536-48149555 None:intergenic 15.0%
!! GTATATATAATAATAGCTAA+AGG + chr5_1:48149727-48149746 Msa0734340:intron 15.0%
!!! CTATTATTATTTTTTGTTGA+AGG - chr5_1:48149778-48149797 None:intergenic 15.0%
!! TTTATACAATAAGATGTTAT+AGG - chr5_1:48149975-48149994 None:intergenic 15.0%
!! ATTTGTAATTTAGATTTCAA+AGG - chr5_1:48149999-48150018 None:intergenic 15.0%
!!! ACTTTTATCTATTTATTGAA+AGG - chr5_1:48150221-48150240 None:intergenic 15.0%
!!! AATTTAATTTTGTGAATTTC+TGG - chr5_1:48150248-48150267 None:intergenic 15.0%
!!! ATAAATTTGAGGTATATTTT+GGG - chr5_1:48150525-48150544 None:intergenic 15.0%
!!! AATAAATTTGAGGTATATTT+TGG - chr5_1:48150526-48150545 None:intergenic 15.0%
!! ACTTTATACTAATAAATTTG+AGG - chr5_1:48150536-48150555 None:intergenic 15.0%
!! TTCAATCACAAAATTATTAT+CGG - chr5_1:48150710-48150729 None:intergenic 15.0%
!! TATATAAGAAAATGAGAAAT+TGG - chr5_1:48150876-48150895 None:intergenic 15.0%
!!! CAATTTTAATACTAAAGTTT+GGG + chr5_1:48138209-48138228 Msa0734340:five_prime_UTR 15.0%
!!! TTTAATTCATTTAAGGTATT+TGG + chr5_1:48139313-48139332 Msa0734340:five_prime_UTR 15.0%
!! AATTTACAAATTACAAAAAC+TGG + chr5_1:48152689-48152708 Msa0734340:intron 15.0%
!! TTCTGTGATAAATTCTATAA+TGG - chr5_1:48138277-48138296 None:intergenic 20.0%
!!! AAAAGAGAAACATTGTTTTA+GGG - chr5_1:48138820-48138839 None:intergenic 20.0%
!!! AAAAAGAGAAACATTGTTTT+AGG - chr5_1:48138821-48138840 None:intergenic 20.0%
!!! TGTCTTGAAAAAATGATTTT+TGG - chr5_1:48138974-48138993 None:intergenic 20.0%
!! TTGGAAATAAATTACTATGA+AGG + chr5_1:48139797-48139816 Msa0734340:five_prime_UTR 20.0%
!!! ATTTAATTTCTCTTGAACTT+TGG + chr5_1:48139855-48139874 Msa0734340:five_prime_UTR 20.0%
!!! TTTAATTTCTCTTGAACTTT+GGG + chr5_1:48139856-48139875 Msa0734340:five_prime_UTR 20.0%
!!! TTTTAATTTTGCTGATTTTG+TGG + chr5_1:48140896-48140915 Msa0734340:intron 20.0%
!! ATTATCAAAACTAAGTAAAG+AGG - chr5_1:48141209-48141228 None:intergenic 20.0%
!! TGATTTAGTTAAAATTCATG+GGG + chr5_1:48141449-48141468 Msa0734340:intron 20.0%
!!! AATTATATTGTGTTTGAAAC+AGG + chr5_1:48141522-48141541 Msa0734340:intron 20.0%
!! TTTGAATACAAACTTAGTTT+AGG + chr5_1:48141767-48141786 Msa0734340:intron 20.0%
!!! AATTTCTTAGTACTGATTTT+AGG + chr5_1:48141819-48141838 Msa0734340:intron 20.0%
!!! CTCAATTAAATTTTTCCTAA+AGG - chr5_1:48141849-48141868 None:intergenic 20.0%
!! AATTGAGAATTATCTTTCTA+TGG + chr5_1:48141862-48141881 Msa0734340:intron 20.0%
!!! AGATTTTTAAGCAATATTGA+CGG + chr5_1:48141947-48141966 Msa0734340:intron 20.0%
!!! TAATTTTAACTTCTATATGC+AGG + chr5_1:48142148-48142167 Msa0734340:intron 20.0%
!!! TATTATAAAACATCTTTTGG+GGG - chr5_1:48142469-48142488 None:intergenic 20.0%
!! TGATTTAGTTAAAATTCAGA+TGG + chr5_1:48143109-48143128 Msa0734340:intron 20.0%
!! CATTTCATAGAATTATGAAA+GGG - chr5_1:48143317-48143336 None:intergenic 20.0%
!! ACATTTCATAGAATTATGAA+AGG - chr5_1:48143318-48143337 None:intergenic 20.0%
!! TTTAATTACAAACTTAGTTC+AGG + chr5_1:48143427-48143446 Msa0734340:intron 20.0%
!!! AATTTCTTAGTACTGATTTT+AGG + chr5_1:48141819-48141838 Msa0734340:intron 20.0%
!!! AGATTTTTATGCAATATTGA+CGG + chr5_1:48143607-48143626 Msa0734340:intron 20.0%
!! TACAAAATACAACACAATTA+TGG + chr5_1:48144206-48144225 Msa0734340:intron 20.0%
!!! AATCTGAATATTTTGAGATA+TGG - chr5_1:48144253-48144272 None:intergenic 20.0%
!! TTTCATGTATGAAATGTTTA+CGG + chr5_1:48144408-48144427 Msa0734340:intron 20.0%
!!! GATTTTGTTGAGTATATTTT+AGG + chr5_1:48144484-48144503 Msa0734340:intron 20.0%
!! GTAAAAAAAAATAAAGATGG+AGG - chr5_1:48144755-48144774 None:intergenic 20.0%
!! GTTATTTGAGGAATTAAAAA+AGG + chr5_1:48146343-48146362 Msa0734340:intron 20.0%
!!! AACAATTTTTTTTTACTCTG+TGG - chr5_1:48146487-48146506 None:intergenic 20.0%
!! GTAATAATTGAATATGGTTA+AGG + chr5_1:48146529-48146548 Msa0734340:intron 20.0%
!!! TTTAGTTAAATGTTGGATTT+TGG + chr5_1:48147493-48147512 Msa0734340:intron 20.0%
!!! ACTTTTTTTTTTTTTTGTGG+TGG - chr5_1:48147608-48147627 None:intergenic 20.0%
!! TAAGAACTCATTTCAATAAA+AGG - chr5_1:48147700-48147719 None:intergenic 20.0%
!! GTTAATATTATGAATTGCTT+TGG + chr5_1:48147797-48147816 Msa0734340:intron 20.0%
!! AAATTGAACAATATTACATG+AGG - chr5_1:48147905-48147924 None:intergenic 20.0%
!!! TTAATTTGGAAGTATTTACA+TGG - chr5_1:48147941-48147960 None:intergenic 20.0%
!! TGGACATCATTTATTTAATT+TGG - chr5_1:48147955-48147974 None:intergenic 20.0%
!! TATTAACATTATTATAGTCG+TGG - chr5_1:48148227-48148246 None:intergenic 20.0%
!! AAACCATTAAATCATACTTA+TGG + chr5_1:48148399-48148418 Msa0734340:intron 20.0%
!! AAACCATAAGTATGATTTAA+TGG - chr5_1:48148405-48148424 None:intergenic 20.0%
!! AGTTAAAAAAATTCCCAATA+TGG + chr5_1:48148499-48148518 Msa0734340:intron 20.0%
!! TATAATTTCTGAATGTTACT+AGG - chr5_1:48148694-48148713 None:intergenic 20.0%
!! GTAACATTCAGAAATTATAA+CGG + chr5_1:48148695-48148714 Msa0734340:intron 20.0%
!! TTGTTGTCATAATATAGTTA+CGG - chr5_1:48148747-48148766 None:intergenic 20.0%
!!! TAAAAACATGTATTTGTTGA+AGG + chr5_1:48148777-48148796 Msa0734340:intron 20.0%
!! CAAAAATATATAGATTTGGA+TGG + chr5_1:48149257-48149276 Msa0734340:intron 20.0%
!! ATAAATGGAAAAACAAAATG+AGG - chr5_1:48149435-48149454 None:intergenic 20.0%
!! AAACTGAAAAATAAAATGAG+AGG - chr5_1:48149468-48149487 None:intergenic 20.0%
!!! TTTTTCAGTTTTCTTATCAT+TGG + chr5_1:48149477-48149496 Msa0734340:intron 20.0%
!!! TTTTAATTACATACTAGCTT+GGG - chr5_1:48150383-48150402 None:intergenic 20.0%
!!! ATTTTAATTACATACTAGCT+TGG - chr5_1:48150384-48150403 None:intergenic 20.0%
!! TCAATCACAAAATTATTATC+GGG - chr5_1:48150709-48150728 None:intergenic 20.0%
!!! GCAATTTTAATACTAAAGTT+TGG + chr5_1:48151524-48151543 Msa0734340:intron 20.0%
!! TTCTGTGATAAATTCTATAA+TGG - chr5_1:48138277-48138296 None:intergenic 20.0%
!!! AAAAGAGAAACATTGTTTTA+GGG - chr5_1:48138820-48138839 None:intergenic 20.0%
!!! AAAAAGAGAAACATTGTTTT+AGG - chr5_1:48138821-48138840 None:intergenic 20.0%
!!! TGTCTTGAAAAAATGATTTT+TGG - chr5_1:48138974-48138993 None:intergenic 20.0%
!!! TGTAATTTGTAAATTGAGTT+AGG - chr5_1:48152684-48152703 None:intergenic 20.0%
!! TTGGAAATAAATTACTATGA+AGG + chr5_1:48139797-48139816 Msa0734340:five_prime_UTR 20.0%
!!! TATGAATAATCTGAAATACT+TGG + chr5_1:48153265-48153284 Msa0734340:intron 20.0%
!! TTCCAAAAATAAAGTTTCAA+TGG + chr5_1:48153921-48153940 Msa0734340:intron 20.0%
!!! AACCATTGAAACTTTATTTT+TGG - chr5_1:48153926-48153945 None:intergenic 20.0%
!!! TTTATATTTTGCTGAATTTG+TGG + chr5_1:48154224-48154243 Msa0734340:intron 20.0%
! AAAAACAACTCTTCTTCAAT+CGG + chr5_1:48138161-48138180 Msa0734340:five_prime_UTR 25.0%
! ATTTAAATGCAACACAGAAA+AGG + chr5_1:48138316-48138335 Msa0734340:five_prime_UTR 25.0%
! TTTAAATGCAACACAGAAAA+GGG + chr5_1:48138317-48138336 Msa0734340:five_prime_UTR 25.0%
!!! TAAAAGATACTTGCTAGTTT+TGG + chr5_1:48138359-48138378 Msa0734340:five_prime_UTR 25.0%
! AAAAATGAACAATTGGAATC+TGG + chr5_1:48138396-48138415 Msa0734340:five_prime_UTR 25.0%
! AAAATGAACAATTGGAATCT+GGG + chr5_1:48138397-48138416 Msa0734340:five_prime_UTR 25.0%
! TTGTTCAAACAATATGCATT+TGG + chr5_1:48138579-48138598 Msa0734340:five_prime_UTR 25.0%
! AAATTAAAGATAGTGAGCTT+TGG + chr5_1:48138736-48138755 Msa0734340:five_prime_UTR 25.0%
! AATTAAAGATAGTGAGCTTT+GGG + chr5_1:48138737-48138756 Msa0734340:five_prime_UTR 25.0%
!!! ATTTTTTCAAGACAGCAAAA+TGG + chr5_1:48138980-48138999 Msa0734340:five_prime_UTR 25.0%
!!! TTTGAAAGCATTCTTATCAA+AGG - chr5_1:48139165-48139184 None:intergenic 25.0%
! TAGGAGGTTTAATTCATTTA+AGG + chr5_1:48139306-48139325 Msa0734340:five_prime_UTR 25.0%
! AATTTACAACCTAAAAAAGC+TGG + chr5_1:48139373-48139392 Msa0734340:five_prime_UTR 25.0%
!!! TCAAAATTTCCAGCTTTTTT+AGG - chr5_1:48139385-48139404 None:intergenic 25.0%
!! CAAGTTAATTTTCCAATGTT+AGG - chr5_1:48139515-48139534 None:intergenic 25.0%
!! TACATTGTTAGTTTAGAGAA+AGG + chr5_1:48139554-48139573 Msa0734340:five_prime_UTR 25.0%
!! ACATTGTTAGTTTAGAGAAA+GGG + chr5_1:48139555-48139574 Msa0734340:five_prime_UTR 25.0%
! ATTGAAGGCTTAAAATATGT+TGG + chr5_1:48139626-48139645 Msa0734340:five_prime_UTR 25.0%
! TTCATGAATTATGTTTGTCA+TGG + chr5_1:48139696-48139715 Msa0734340:five_prime_UTR 25.0%
! CTAAGAATAATTATCCAACT+TGG - chr5_1:48139833-48139852 None:intergenic 25.0%
!!! AATTCCAGTTTTTTTAGAGA+TGG - chr5_1:48139923-48139942 None:intergenic 25.0%
!! CATGTATAATCTGAAATACT+TGG + chr5_1:48139949-48139968 Msa0734340:five_prime_UTR 25.0%
! CTATAATTTCACAAAACTGA+AGG + chr5_1:48140312-48140331 Msa0734340:five_prime_UTR 25.0%
! TATTCCAAATATAGAGATTG+AGG + chr5_1:48140597-48140616 Msa0734340:five_prime_UTR 25.0%
! TAATCCTCAATCTCTATATT+TGG - chr5_1:48140604-48140623 None:intergenic 25.0%
!!! AGTAAAATTGATTTTTGCGA+TGG - chr5_1:48140663-48140682 None:intergenic 25.0%
!! ATCGCAAAAATCAATTTTAC+TGG + chr5_1:48140662-48140681 Msa0734340:five_prime_UTR 25.0%
! TGAAATCCAAACATAAGAAT+GGG - chr5_1:48140702-48140721 None:intergenic 25.0%
!!! CACTTCATTTTTTACTTCTT+TGG + chr5_1:48140733-48140752 Msa0734340:intron 25.0%
! TTAGAACATTTATCCTTCTT+AGG - chr5_1:48140813-48140832 None:intergenic 25.0%
! AAGGATAAATGTTCTAATTC+AGG + chr5_1:48140816-48140835 Msa0734340:five_prime_UTR 25.0%
!!! TTTGTGGAAATTGATTTGAA+TGG + chr5_1:48140912-48140931 Msa0734340:intron 25.0%
! TTTGAATGTAATTATTGGGT+TGG + chr5_1:48141249-48141268 Msa0734340:five_prime_UTR 25.0%
! ATTACTTTGTTGGATCATTT+AGG + chr5_1:48141343-48141362 Msa0734340:CDS 25.0%
! AAGTTTGTATTCAAAAAGTG+TGG - chr5_1:48141762-48141781 None:intergenic 25.0%
!!! GATTTTTAAGCAATATTGAC+GGG + chr5_1:48141948-48141967 Msa0734340:intron 25.0%
!!! AGTAAAATTGATTTTTGCGA+TGG - chr5_1:48140663-48140682 None:intergenic 25.0%
!! ATCGCAAAAATCAATTTTAC+TGG + chr5_1:48140662-48140681 Msa0734340:five_prime_UTR 25.0%
!! CAAAAATCAATTTTACTGGT+AGG + chr5_1:48140666-48140685 Msa0734340:intron 25.0%
!!! TTTTGCTGATTTGAATTGAA+TGG + chr5_1:48142564-48142583 Msa0734340:intron 25.0%
!! ATGTCATCAATATGAAGTTT+TGG + chr5_1:48142887-48142906 Msa0734340:intron 25.0%
! ATGATTTACGAAAAGTGAAA+TGG + chr5_1:48142926-48142945 Msa0734340:intron 25.0%
! TGAAATGGAATTCTGAATAT+TGG + chr5_1:48142941-48142960 Msa0734340:intron 25.0%
! AATATTGGTGAATGATTGTT+TGG + chr5_1:48142956-48142975 Msa0734340:intron 25.0%
!! ATTACTTTGATGGATCATTT+AGG + chr5_1:48143009-48143028 Msa0734340:intron 25.0%
! TAACTACATTAAAGATTGCT+AGG + chr5_1:48143397-48143416 Msa0734340:intron 25.0%
! TTCAACTAAATTTCTCCTTA+AGG - chr5_1:48143509-48143528 None:intergenic 25.0%
!! GATTTTTATGCAATATTGAC+GGG + chr5_1:48143608-48143627 Msa0734340:intron 25.0%
! TTTCTGTGTTTAATGTCTAT+GGG + chr5_1:48143849-48143868 Msa0734340:intron 25.0%
! CTCAAAGAAAATCGTAATAT+AGG - chr5_1:48143924-48143943 None:intergenic 25.0%
!!! TTACGATTTTCTTTGAGAAT+TGG + chr5_1:48143927-48143946 Msa0734340:intron 25.0%
!!! TACGATTTTCTTTGAGAATT+GGG + chr5_1:48143928-48143947 Msa0734340:intron 25.0%
!!! CAGCATCAATTTTAAAGATA+TGG - chr5_1:48143954-48143973 None:intergenic 25.0%
!! TTTAGTTCAAGATATTTACC+AGG + chr5_1:48144001-48144020 Msa0734340:intron 25.0%
! AAATACAACACAATTATGGT+TGG + chr5_1:48144210-48144229 Msa0734340:intron 25.0%
!! TCAAAATATTCAGATTTTCG+TGG + chr5_1:48144257-48144276 Msa0734340:intron 25.0%
! ATATTATAGGAACTGAAGAA+TGG - chr5_1:48144320-48144339 None:intergenic 25.0%
! ATATATTCATGAAAACATGC+AGG + chr5_1:48144374-48144393 Msa0734340:intron 25.0%
! TTTCACAAAGTTGAGAAATA+TGG - chr5_1:48144952-48144971 None:intergenic 25.0%
! TATTTCTCAACTTTGTGAAA+AGG + chr5_1:48144952-48144971 Msa0734340:intron 25.0%
! TTATTTGTATATTTCCCCTA+AGG - chr5_1:48145297-48145316 None:intergenic 25.0%
! ATGTAATTGAAGTGAATATC+AGG - chr5_1:48145399-48145418 None:intergenic 25.0%
! TGCTAAAACTGGAAAAATTA+AGG + chr5_1:48145428-48145447 Msa0734340:intron 25.0%
!! ACATTGAAAGGTAAAGTTTT+TGG + chr5_1:48145545-48145564 Msa0734340:intron 25.0%
! AGATTATATTTCTTGCTTCT+AGG + chr5_1:48145626-48145645 Msa0734340:intron 25.0%
! TAATATGGTCATAACTCATA+AGG - chr5_1:48145796-48145815 None:intergenic 25.0%
! AAGTTAACCATTCATGTATT+TGG + chr5_1:48146167-48146186 Msa0734340:intron 25.0%
! AGTTAACCATTCATGTATTT+GGG + chr5_1:48146168-48146187 Msa0734340:intron 25.0%
!! TTACCATCTTTTAAATGTAC+AGG + chr5_1:48146270-48146289 Msa0734340:intron 25.0%
! ATATGTAATGAACAGTTAGA+TGG + chr5_1:48146296-48146315 Msa0734340:intron 25.0%
! CAATACAAGAATGATATTAG+AGG + chr5_1:48146460-48146479 Msa0734340:intron 25.0%
! TATAAGAAATTGGAATGAGT+TGG + chr5_1:48146507-48146526 Msa0734340:intron 25.0%
!!! GAGTTGGTAATAATTGAATA+TGG + chr5_1:48146523-48146542 Msa0734340:intron 25.0%
!!! TTATGTGCCACTATAAATTT+TGG + chr5_1:48146596-48146615 Msa0734340:intron 25.0%
!! TTGATACTATGATTTTGCTT+TGG + chr5_1:48146650-48146669 Msa0734340:intron 25.0%
!! TGATACTATGATTTTGCTTT+GGG + chr5_1:48146651-48146670 Msa0734340:intron 25.0%
! TAGCACAATCATGAAATTTA+TGG + chr5_1:48146779-48146798 Msa0734340:intron 25.0%
! AATATTGATACAAACTCAGT+TGG + chr5_1:48147039-48147058 Msa0734340:intron 25.0%
! ATAATTGTGTGAAACTCAAA+TGG + chr5_1:48147292-48147311 Msa0734340:intron 25.0%
! TAATTCATTCATCTCACATT+AGG - chr5_1:48147322-48147341 None:intergenic 25.0%
! AAAACTAAATCTATCTATCC+TGG + chr5_1:48147518-48147537 Msa0734340:intron 25.0%
!! TTCAATTGGCATTGAAAATA+GGG - chr5_1:48147855-48147874 None:intergenic 25.0%
!! TTTCAATTGGCATTGAAAAT+AGG - chr5_1:48147856-48147875 None:intergenic 25.0%
! AATGCCAATTGAAAACAATT+TGG + chr5_1:48147862-48147881 Msa0734340:intron 25.0%
!! TTGACCAAATTGTTTTCAAT+TGG - chr5_1:48147869-48147888 None:intergenic 25.0%
! ATTGTTCAATTTACTCATAG+AGG + chr5_1:48147913-48147932 Msa0734340:intron 25.0%
! ACTTTAACTCAATACTCTAT+GGG - chr5_1:48148073-48148092 None:intergenic 25.0%
! ACACTGAAATTCTTACTATA+TGG - chr5_1:48148285-48148304 None:intergenic 25.0%
! AAACCATTACACAATTATCT+TGG + chr5_1:48148356-48148375 Msa0734340:intron 25.0%
! AAACCAAGATAATTGTGTAA+TGG - chr5_1:48148362-48148381 None:intergenic 25.0%
!!! ATTTTAATGGTTTGGTCTTA+TGG - chr5_1:48148435-48148454 None:intergenic 25.0%
!!! TCTTAGTCATTTTAATGGTT+TGG - chr5_1:48148443-48148462 None:intergenic 25.0%
! TGATGTGAATATTACTAGTT+TGG + chr5_1:48148472-48148491 Msa0734340:intron 25.0%
! GTTTAATTAAGTGCTTAACT+AGG + chr5_1:48148604-48148623 Msa0734340:intron 25.0%
! TATATTGGATTGAAATGGTA+AGG + chr5_1:48149058-48149077 Msa0734340:intron 25.0%
! ATATTGGATTGAAATGGTAA+GGG + chr5_1:48149059-48149078 Msa0734340:intron 25.0%
! AAAAATAAAATGAGAGGCAA+TGG - chr5_1:48149462-48149481 None:intergenic 25.0%
! AATCTTCATCCATAAATTTG+AGG + chr5_1:48149588-48149607 Msa0734340:intron 25.0%
! TTATCGATACCTCAAATTTA+TGG - chr5_1:48149600-48149619 None:intergenic 25.0%
! GTAAAAATGAGATTCTAATG+AGG - chr5_1:48149626-48149645 None:intergenic 25.0%
! AAATTGTGAAAGACAAAACA+TGG + chr5_1:48149658-48149677 Msa0734340:intron 25.0%
!!! TCATTAATTAGGATTTTAGC+GGG - chr5_1:48150131-48150150 None:intergenic 25.0%
!! CTCATTAATTAGGATTTTAG+CGG - chr5_1:48150132-48150151 None:intergenic 25.0%
! GTATGTAATTAAAATACCAG+TGG + chr5_1:48150389-48150408 Msa0734340:intron 25.0%
! ATAAAATTTCATTCCAGTTC+TGG - chr5_1:48150465-48150484 None:intergenic 25.0%
!!! AACAGTATACTTTTTACAAG+TGG + chr5_1:48150655-48150674 Msa0734340:intron 25.0%
! CAATCACAAAATTATTATCG+GGG - chr5_1:48150708-48150727 None:intergenic 25.0%
! AAAAACAACTCTTCTTCAAT+CGG + chr5_1:48138161-48138180 Msa0734340:five_prime_UTR 25.0%
! ATTTAAATGCAACACAGAAA+AGG + chr5_1:48138316-48138335 Msa0734340:five_prime_UTR 25.0%
! TTTAAATGCAACACAGAAAA+GGG + chr5_1:48138317-48138336 Msa0734340:five_prime_UTR 25.0%
!!! TAAAAGATACTTGCTAGTTT+TGG + chr5_1:48138359-48138378 Msa0734340:five_prime_UTR 25.0%
! AAAAATGAACAATTGGAATC+TGG + chr5_1:48138396-48138415 Msa0734340:five_prime_UTR 25.0%
! AAAATGAACAATTGGAATCT+GGG + chr5_1:48138397-48138416 Msa0734340:five_prime_UTR 25.0%
! TTGTTCAAACAATATGCATT+TGG + chr5_1:48138579-48138598 Msa0734340:five_prime_UTR 25.0%
! AAATTAAAGATAGTGAGCTT+TGG + chr5_1:48138736-48138755 Msa0734340:five_prime_UTR 25.0%
! AATTAAAGATAGTGAGCTTT+GGG + chr5_1:48138737-48138756 Msa0734340:five_prime_UTR 25.0%
!!! ATTTTTTCAAGACAGCAAAA+TGG + chr5_1:48138980-48138999 Msa0734340:five_prime_UTR 25.0%
!!! TTTGAAAGCATTCTTATCAA+AGG - chr5_1:48139165-48139184 None:intergenic 25.0%
! ATCTTGAAAATAAAACACTG+TGG + chr5_1:48152714-48152733 Msa0734340:intron 25.0%
!! CAAGTTAATTTTCCAATGTT+AGG - chr5_1:48139515-48139534 None:intergenic 25.0%
!! TACATTGTTAGTTTAGAGAA+AGG + chr5_1:48139554-48139573 Msa0734340:five_prime_UTR 25.0%
!! ACATTGTTAGTTTAGAGAAA+GGG + chr5_1:48139555-48139574 Msa0734340:five_prime_UTR 25.0%
! ATCAAACACTTAAACAATGT+TGG + chr5_1:48152942-48152961 Msa0734340:intron 25.0%
! TTCATGAATTATGTTTGTCA+TGG + chr5_1:48139696-48139715 Msa0734340:five_prime_UTR 25.0%
! CTAAGAATAATTATCCAACT+TGG - chr5_1:48139833-48139852 None:intergenic 25.0%
!!! AATTCCAACTTTTTTAGAGA+TGG - chr5_1:48153239-48153258 None:intergenic 25.0%
!!! AGTAAAATTGATTTTTGCGA+TGG - chr5_1:48140663-48140682 None:intergenic 25.0%
!! ATCGCAAAAATCAATTTTAC+TGG + chr5_1:48140662-48140681 Msa0734340:five_prime_UTR 25.0%
! TGAAATCCAAACATAAGAAT+GGG - chr5_1:48140702-48140721 None:intergenic 25.0%
! TTGAAATCCAAACATAAGAA+TGG - chr5_1:48154028-48154047 None:intergenic 25.0%
! AAAATATCTTTCATGTACTC+TGG - chr5_1:48140781-48140800 None:intergenic 25.0%
! AAGGATAAATGTTCTAATTC+AGG + chr5_1:48140816-48140835 Msa0734340:five_prime_UTR 25.0%
AGAATAAATGCAATGTGAGT+AGG - chr5_1:48137464-48137483 None:intergenic 30.0%
CACATTGCATTTATTCTCAA+AGG + chr5_1:48137467-48137486 Msa0734340:five_prime_UTR 30.0%
AATGAATTTGCAACCATTTC+TGG + chr5_1:48137628-48137647 Msa0734340:five_prime_UTR 30.0%
!! CTTTGATTTGATTCCAGAAA+TGG - chr5_1:48137644-48137663 None:intergenic 30.0%
!! CATTTCTGGAATCAAATCAA+AGG + chr5_1:48137642-48137661 Msa0734340:five_prime_UTR 30.0%
CTCAGCAATATCTTAGAAAA+AGG - chr5_1:48137845-48137864 None:intergenic 30.0%
!!! AAGAAGTTTTTTCTACAGGA+GGG + chr5_1:48137952-48137971 Msa0734340:five_prime_UTR 30.0%
!! ATTACTGAACCAAAAGTGTT+TGG + chr5_1:48138036-48138055 Msa0734340:five_prime_UTR 30.0%
!! TTTCCATCTATTCCGTTTTT+GGG + chr5_1:48138124-48138143 Msa0734340:five_prime_UTR 30.0%
! TTGTGTTTCTGAGAATTTCT+CGG + chr5_1:48138233-48138252 Msa0734340:five_prime_UTR 30.0%
TCTGTGTTGCATTTAAATTG+AGG - chr5_1:48138314-48138333 None:intergenic 30.0%
GTGGAAGAAAAATGAACAAT+TGG + chr5_1:48138389-48138408 Msa0734340:five_prime_UTR 30.0%
AGTACAAAGCTTGTGAAAAT+AGG + chr5_1:48138618-48138637 Msa0734340:five_prime_UTR 30.0%
AAAGCTTGTGAAAATAGGAA+AGG + chr5_1:48138623-48138642 Msa0734340:five_prime_UTR 30.0%
!! CTAATGGATTTATTGCAAAG+AGG + chr5_1:48138901-48138920 Msa0734340:five_prime_UTR 30.0%
TATTGCAAAGAGGAATTTAG+AGG + chr5_1:48138911-48138930 Msa0734340:five_prime_UTR 30.0%
AATTTAGAGGTTGAAGATGT+TGG + chr5_1:48138924-48138943 Msa0734340:five_prime_UTR 30.0%
AGCAAAATGGATGAATATTC+TGG + chr5_1:48138993-48139012 Msa0734340:five_prime_UTR 30.0%
!! TTTAGGTTGTAAATTGAGTC+AGG - chr5_1:48139368-48139387 None:intergenic 30.0%
AAGGATTATCATTACCAAGT+TGG + chr5_1:48139816-48139835 Msa0734340:five_prime_UTR 30.0%
! ACTACCATCTCTAAAAAAAC+TGG + chr5_1:48139916-48139935 Msa0734340:five_prime_UTR 30.0%
CTAAAAAAACTGGAATTACG+TGG + chr5_1:48139926-48139945 Msa0734340:five_prime_UTR 30.0%
ATTGTCAACTTAGAAAGACA+AGG - chr5_1:48140094-48140113 None:intergenic 30.0%
TATTCCTTCACCGTAATTTA+GGG - chr5_1:48140236-48140255 None:intergenic 30.0%
TTATTCCTTCACCGTAATTT+AGG - chr5_1:48140237-48140256 None:intergenic 30.0%
!! TCTTGAGGTTCTGAATATTT+GGG + chr5_1:48140510-48140529 Msa0734340:five_prime_UTR 30.0%
CTATTTCCCATTCTTATGTT+TGG + chr5_1:48140693-48140712 Msa0734340:intron 30.0%
CTGAAATCCAAACATAAGAA+TGG - chr5_1:48140703-48140722 None:intergenic 30.0%
! TTTTACTGTTCAACCTAAGA+AGG + chr5_1:48140797-48140816 Msa0734340:five_prime_UTR 30.0%
!! GGAAATTGATTTGAATGGTT+AGG + chr5_1:48140917-48140936 Msa0734340:intron 30.0%
! ATCATTAGGTACGTTTGTTA+CGG - chr5_1:48140969-48140988 None:intergenic 30.0%
ATGTCATAGATATGAAGTGT+TGG + chr5_1:48141289-48141308 Msa0734340:five_prime_UTR 30.0%
! TGTCATAGATATGAAGTGTT+GGG + chr5_1:48141290-48141309 Msa0734340:five_prime_UTR 30.0%
AACAAAGTAATTGCATCCTT+TGG - chr5_1:48141334-48141353 None:intergenic 30.0%
AAAGGATGCAATTACTTTGT+TGG + chr5_1:48141333-48141352 Msa0734340:CDS 30.0%
ACTTAACCTAACCAAATCTT+AGG - chr5_1:48141480-48141499 None:intergenic 30.0%
!!! TGCTATTTTACAAGCTATCA+TGG - chr5_1:48141550-48141569 None:intergenic 30.0%
! ATGTTTTCAATGTTTTCCAG+AGG + chr5_1:48141623-48141642 Msa0734340:CDS 30.0%
!! TCGTAGTACTGAAATTTTGT+TGG + chr5_1:48141912-48141931 Msa0734340:intron 30.0%
CAATTATGCAACCAAGAAAA+AGG - chr5_1:48142016-48142035 None:intergenic 30.0%
TAGCATAAATCTTCTTCTAG+AGG - chr5_1:48142085-48142104 None:intergenic 30.0%
! TAATCAGCAATCACTCTTTT+TGG - chr5_1:48142267-48142286 None:intergenic 30.0%
!! ATAAGAAGGGTGTATTTTAG+GGG - chr5_1:48142348-48142367 None:intergenic 30.0%
!! CATAAGAAGGGTGTATTTTA+GGG - chr5_1:48142349-48142368 None:intergenic 30.0%
!! ACATAAGAAGGGTGTATTTT+AGG - chr5_1:48142350-48142369 None:intergenic 30.0%
! CTGATTTGAATTGAATGGTT+AGG + chr5_1:48142569-48142588 Msa0734340:intron 30.0%
AAAGGTTGCAATTACTTTGA+TGG + chr5_1:48142999-48143018 Msa0734340:intron 30.0%
!! AGATGGTTTGTTCTAAGATT+CGG + chr5_1:48143126-48143145 Msa0734340:intron 30.0%
TTATGTTTGCCTATTGAAAC+AGG + chr5_1:48143184-48143203 Msa0734340:intron 30.0%
ATCATAGATCCTGTTTCAAT+AGG - chr5_1:48143196-48143215 None:intergenic 30.0%
AGCTTGTAAAATAGCAGAAA+CGG + chr5_1:48143216-48143235 Msa0734340:CDS 30.0%
!! AGGTTTTCAATGTTTTTCAG+AGG + chr5_1:48143285-48143304 Msa0734340:CDS 30.0%
!!! ATCTTTTTATGGCTTTGAGT+CGG + chr5_1:48143533-48143552 Msa0734340:intron 30.0%
CCAAGAAAAAGTTTAATCCT+TGG - chr5_1:48143665-48143684 None:intergenic 30.0%
!! CCAAGGATTAAACTTTTTCT+TGG + chr5_1:48143662-48143681 Msa0734340:intron 30.0%
GAAATACCTAGAGATCAAAT+AGG - chr5_1:48143691-48143710 None:intergenic 30.0%
TTGATCTCTAGGTATTTCTT+AGG + chr5_1:48142033-48142052 Msa0734340:intron 30.0%
GTTTCTGTGTTTAATGTCTA+TGG + chr5_1:48143848-48143867 Msa0734340:intron 30.0%
TCTAACCACAACATGTTTAT+CGG - chr5_1:48144117-48144136 None:intergenic 30.0%
! AATTCTGACTATTGGTGTTT+AGG - chr5_1:48144461-48144480 None:intergenic 30.0%
TAAACACCAATAGTCAGAAT+TGG + chr5_1:48144460-48144479 Msa0734340:intron 30.0%
TCATCATTCTCCAACATTAA+AGG + chr5_1:48144639-48144658 Msa0734340:intron 30.0%
AAAGAGAAAGTCACATAACA+AGG - chr5_1:48144857-48144876 None:intergenic 30.0%
! TGTTATGTGACTTTCTCTTT+TGG + chr5_1:48144857-48144876 Msa0734340:intron 30.0%
! CTTTCTCTTTTGGATATCAT+AGG + chr5_1:48144867-48144886 Msa0734340:intron 30.0%
TTGGATATCATAGGTAAGTT+TGG + chr5_1:48144876-48144895 Msa0734340:intron 30.0%
TGGATATCATAGGTAAGTTT+GGG + chr5_1:48144877-48144896 Msa0734340:intron 30.0%
!! TGGGGCATTGAAATATATAA+TGG + chr5_1:48144896-48144915 Msa0734340:intron 30.0%
ATCAACTTAAATAGCCCTAA+TGG - chr5_1:48144985-48145004 None:intergenic 30.0%
!! ATTAGGGCTATTTAAGTTGA+TGG + chr5_1:48144984-48145003 Msa0734340:intron 30.0%
AATGGAATGTGTATTTACTG+TGG - chr5_1:48145118-48145137 None:intergenic 30.0%
ATTTCATGCTCTCAATTGAA+TGG + chr5_1:48145153-48145172 Msa0734340:intron 30.0%
! AATTCGTTTGAGTGATTTTC+AGG + chr5_1:48145198-48145217 Msa0734340:intron 30.0%
! TGAATTCATTGGAACCTTTT+CGG + chr5_1:48145228-48145247 Msa0734340:intron 30.0%
! ATCTTTTACTGGTAAACCTT+AGG + chr5_1:48145278-48145297 Msa0734340:intron 30.0%
! TCTTTTACTGGTAAACCTTA+GGG + chr5_1:48145279-48145298 Msa0734340:intron 30.0%
AAATATACAAATAATCGCGC+AGG + chr5_1:48145303-48145322 Msa0734340:intron 30.0%
TTCACTTCAAGTACATTGAA+AGG + chr5_1:48145533-48145552 Msa0734340:intron 30.0%
!!! AAAGGTAAAGTTTTTGGTTG+CGG + chr5_1:48145551-48145570 Msa0734340:intron 30.0%
ACAAATTCTGCTATAGTTGT+TGG + chr5_1:48145657-48145676 Msa0734340:intron 30.0%
CAAATTCTGCTATAGTTGTT+GGG + chr5_1:48145658-48145677 Msa0734340:intron 30.0%
TCTTATTCCCATTGAATCAT+TGG + chr5_1:48145715-48145734 Msa0734340:intron 30.0%
TCTTCAACCAATGATTCAAT+GGG - chr5_1:48145725-48145744 None:intergenic 30.0%
TTCTTCAACCAATGATTCAA+TGG - chr5_1:48145726-48145745 None:intergenic 30.0%
!!! TCATTTTACTTTTTCTGTGC+AGG + chr5_1:48145821-48145840 Msa0734340:intron 30.0%
CTTTCTTATTACACTGTTGT+TGG + chr5_1:48145849-48145868 Msa0734340:CDS 30.0%
CAAAGACATAAATGTGTGTA+AGG + chr5_1:48145894-48145913 Msa0734340:intron 30.0%
GAACGAAAGTAAATTGTTTC+TGG - chr5_1:48146094-48146113 None:intergenic 30.0%
AGTTAACCCAAATACATGAA+TGG - chr5_1:48146177-48146196 None:intergenic 30.0%
TTTCGTTCGCATAATGTATT+TGG + chr5_1:48146206-48146225 Msa0734340:intron 30.0%
CAACCTGTACATTTAAAAGA+TGG - chr5_1:48146276-48146295 None:intergenic 30.0%
!!! GGTTTTGAATATTTTGTCCA+AGG + chr5_1:48146317-48146336 Msa0734340:intron 30.0%
AGCACATCCAAAATTTATAG+TGG - chr5_1:48146606-48146625 None:intergenic 30.0%
! GATACTATGATTTTGCTTTC+CGG + chr5_1:48146756-48146775 Msa0734340:intron 30.0%
AAATTTCATGATTGTGCTAC+CGG - chr5_1:48146778-48146797 None:intergenic 30.0%
TGAGAGTTATTATGGTACAA+AGG - chr5_1:48146883-48146902 None:intergenic 30.0%
TGCAATTGTGAGAGTTATTA+TGG - chr5_1:48146891-48146910 None:intergenic 30.0%
!!! ATTTGTAGTGTTTTTTCACG+AGG + chr5_1:48147014-48147033 Msa0734340:intron 30.0%
! GTAAGGTTTAATAGCAGTTT+TGG - chr5_1:48147261-48147280 None:intergenic 30.0%
AACAATGCATAGAATATGCA+AGG + chr5_1:48147563-48147582 Msa0734340:intron 30.0%
CACAACATAATCAATTGAAG+CGG - chr5_1:48147657-48147676 None:intergenic 30.0%
GTGAAGAAATAATAGTGTAG+AGG - chr5_1:48147746-48147765 None:intergenic 30.0%
CTTTAACTCAATACTCTATG+GGG - chr5_1:48148072-48148091 None:intergenic 30.0%
GACTTTAACTCAATACTCTA+TGG - chr5_1:48148074-48148093 None:intergenic 30.0%
ACATTATTATAGTCGTGGAA+TGG - chr5_1:48148222-48148241 None:intergenic 30.0%
!! GCATCTCTTAGTCATTTTAA+TGG - chr5_1:48148448-48148467 None:intergenic 30.0%
!! TGATTTTGGTACACCATATT+GGG - chr5_1:48148515-48148534 None:intergenic 30.0%
!! ATGATTTTGGTACACCATAT+TGG - chr5_1:48148516-48148535 None:intergenic 30.0%
AATATGGTGTACCAAAATCA+TGG + chr5_1:48148515-48148534 Msa0734340:intron 30.0%
! TGAAAATGAGTCCATGATTT+TGG - chr5_1:48148529-48148548 None:intergenic 30.0%
TTAGTAGGAAATTATGGCAT+AGG - chr5_1:48148812-48148831 None:intergenic 30.0%
!! TTTCTTCACCTGTTTTTCTT+TGG + chr5_1:48148863-48148882 Msa0734340:intron 30.0%
!! TTCTTCACCTGTTTTTCTTT+GGG + chr5_1:48148864-48148883 Msa0734340:intron 30.0%
GCAAAAATAAGACGGTATAT+TGG + chr5_1:48149043-48149062 Msa0734340:intron 30.0%
TATTGGATTGAAATGGTAAG+GGG + chr5_1:48149060-48149079 Msa0734340:intron 30.0%
!!! GACAATCAAGACTTTTTTGA+AGG + chr5_1:48149172-48149191 Msa0734340:intron 30.0%
!! TTTGGATGGATTCTTTTGTA+CGG + chr5_1:48149271-48149290 Msa0734340:intron 30.0%
ATCCTAATTAATGAGTGATG+AGG + chr5_1:48150137-48150156 Msa0734340:intron 30.0%
AATTAAAATACCAGTGGCAT+TGG + chr5_1:48150395-48150414 Msa0734340:intron 30.0%
TACTGGCATGTATAATTGTT+GGG - chr5_1:48150609-48150628 None:intergenic 30.0%
AACAATTATACATGCCAGTA+GGG + chr5_1:48150609-48150628 Msa0734340:intron 30.0%
TAATTGTGAGCAAACTTTCA+CGG - chr5_1:48150771-48150790 None:intergenic 30.0%
AACTTCGAGAATAAATGCAA+TGG - chr5_1:48150819-48150838 None:intergenic 30.0%
! CTCTCTATTTTCCCTAAAAA+TGG + chr5_1:48150901-48150920 Msa0734340:intron 30.0%
! TGGTTGCAAATTCATTTTGT+AGG - chr5_1:48150970-48150989 None:intergenic 30.0%
AATGAATTTGCAACCATTTC+TGG + chr5_1:48137628-48137647 Msa0734340:five_prime_UTR 30.0%
!!! TTTTGACTTGATTCCAGAAA+TGG - chr5_1:48150990-48151009 None:intergenic 30.0%
!! TTTCCATCTATTCCGTTTTT+GGG + chr5_1:48138124-48138143 Msa0734340:five_prime_UTR 30.0%
! TTGTGTTTCTGAGAATTTCT+CGG + chr5_1:48138233-48138252 Msa0734340:five_prime_UTR 30.0%
TCTGTGTTGCATTTAAATTG+AGG - chr5_1:48138314-48138333 None:intergenic 30.0%
GTGGAAGAAAAATGAACAAT+TGG + chr5_1:48138389-48138408 Msa0734340:five_prime_UTR 30.0%
AGTACAAAGCTTGTGAAAAT+AGG + chr5_1:48138618-48138637 Msa0734340:five_prime_UTR 30.0%
AAAGCTTGTGAAAATAGGAA+AGG + chr5_1:48138623-48138642 Msa0734340:five_prime_UTR 30.0%
!! CTAATGGATTTATTGCAAAG+AGG + chr5_1:48138901-48138920 Msa0734340:five_prime_UTR 30.0%
TATTGCAAAGAGGAATTTAG+AGG + chr5_1:48138911-48138930 Msa0734340:five_prime_UTR 30.0%
AATTTAGAGGTTGAAGATGT+TGG + chr5_1:48138924-48138943 Msa0734340:five_prime_UTR 30.0%
AGCAAAATGGATGAATATTC+TGG + chr5_1:48138993-48139012 Msa0734340:five_prime_UTR 30.0%
TAGGGGGTTTAATTCATTTA+AGG + chr5_1:48152622-48152641 Msa0734340:intron 30.0%
CTTAGACATATAGTCATTGA+AGG + chr5_1:48139464-48139483 Msa0734340:five_prime_UTR 30.0%
AAGGATTATCATTACCAAGT+TGG + chr5_1:48139816-48139835 Msa0734340:five_prime_UTR 30.0%
TGAATTTGCACAAAATTGTG+CGG + chr5_1:48153192-48153211 Msa0734340:intron 30.0%
! ACTACCATCTCTAAAAAAGT+TGG + chr5_1:48153232-48153251 Msa0734340:intron 30.0%
ATTGTCAACTTAGAAAGACA+AGG - chr5_1:48140094-48140113 None:intergenic 30.0%
AATGTAACAATGAGTTACTG+AGG + chr5_1:48153495-48153514 Msa0734340:intron 30.0%
CTTCAATCTCTGTTTATCTT+TGG + chr5_1:48153614-48153633 Msa0734340:intron 30.0%
CTATTTCCCATTCTTATGTT+TGG + chr5_1:48140693-48140712 Msa0734340:intron 30.0%
TTAGAACATTTATCCTTCTG+AGG - chr5_1:48154150-48154169 None:intergenic 30.0%
TTTGTGGAGATTGAATTGAA+TGG + chr5_1:48154240-48154259 Msa0734340:intron 30.0%
! AAGACGTTTTCTTCATCATT+AGG - chr5_1:48154331-48154350 None:intergenic 30.0%
! ATGATGAAGAAAACGTCTTT+TGG + chr5_1:48154332-48154351 Msa0734340:CDS 30.0%
! TGGTTGCAAATTCATTTTGC+AGG - chr5_1:48137624-48137643 None:intergenic 35.0%
! AACGGCTTTGATCATATCTA+AGG - chr5_1:48137686-48137705 None:intergenic 35.0%
! AACAGGTTGAAAGAGATTAC+AGG + chr5_1:48137901-48137920 Msa0734340:five_prime_UTR 35.0%
! ACAGGTTGAAAGAGATTACA+GGG + chr5_1:48137902-48137921 Msa0734340:five_prime_UTR 35.0%
!!! GAGGAAGAAGTTTTTTCTAC+AGG + chr5_1:48137948-48137967 Msa0734340:five_prime_UTR 35.0%
!!! GAAGAAGTTTTTTCTACAGG+AGG + chr5_1:48137951-48137970 Msa0734340:five_prime_UTR 35.0%
TGGTTCAGTAATAATAGCAC+TGG - chr5_1:48138028-48138047 None:intergenic 35.0%
CAAAAACGGAATAGATGGAA+AGG - chr5_1:48138125-48138144 None:intergenic 35.0%
! CTTTCCATCTATTCCGTTTT+TGG + chr5_1:48138123-48138142 Msa0734340:five_prime_UTR 35.0%
TAACCCAAAAACGGAATAGA+TGG - chr5_1:48138130-48138149 None:intergenic 35.0%
!!! ATCTATTCCGTTTTTGGGTT+AGG + chr5_1:48138129-48138148 Msa0734340:five_prime_UTR 35.0%
TTGAAAAATGAGTTGTCGTG+TGG + chr5_1:48138444-48138463 Msa0734340:five_prime_UTR 35.0%
ATCACGAGTGGATACTAAAA+TGG - chr5_1:48138484-48138503 None:intergenic 35.0%
GAGATCGTAAAGAAATGCAA+TGG + chr5_1:48138645-48138664 Msa0734340:five_prime_UTR 35.0%
AAAGCAGGCAAAATTTCTTG+CGG - chr5_1:48138768-48138787 None:intergenic 35.0%
! AAGAAATTTTGCCTGCTTTG+AGG + chr5_1:48138769-48138788 Msa0734340:five_prime_UTR 35.0%
!!! GAGAAACATTGTTTTAGGGT+TGG - chr5_1:48138816-48138835 None:intergenic 35.0%
TGTGCTATATTTCCCAAAGA+TGG + chr5_1:48138840-48138859 Msa0734340:five_prime_UTR 35.0%
TTCAGGATTTCTCCATCTTT+GGG - chr5_1:48138855-48138874 None:intergenic 35.0%
! AGGAAGAATTGATTCAGCTT+TGG + chr5_1:48138874-48138893 Msa0734340:five_prime_UTR 35.0%
!! AGAATTGATTCAGCTTTGGA+TGG + chr5_1:48138878-48138897 Msa0734340:five_prime_UTR 35.0%
AAGATGTTGGAAACATGGTT+TGG + chr5_1:48138937-48138956 Msa0734340:five_prime_UTR 35.0%
! GGGAAGTTATCATGTTTTTC+TGG - chr5_1:48139233-48139252 None:intergenic 35.0%
TAGTGATGGCATATGGATAA+AGG - chr5_1:48139288-48139307 None:intergenic 35.0%
TTTATCCATATGCCATCACT+AGG + chr5_1:48139287-48139306 Msa0734340:five_prime_UTR 35.0%
TGAATTAAACCTCCTAGTGA+TGG - chr5_1:48139302-48139321 None:intergenic 35.0%
TCTCTCATGTTTCCTAACAT+TGG + chr5_1:48139500-48139519 Msa0734340:five_prime_UTR 35.0%
GGGATTGTAACAAAATTGTG+CGG + chr5_1:48139876-48139895 Msa0734340:five_prime_UTR 35.0%
GATGGTAGTTTACCAAGTAA+CGG - chr5_1:48139905-48139924 None:intergenic 35.0%
TTCAATAACCCCTCTATGTT+TGG - chr5_1:48140049-48140068 None:intergenic 35.0%
GGTTATTGAAAGTGGAAAGA+GGG + chr5_1:48140059-48140078 Msa0734340:five_prime_UTR 35.0%
GTTATTGAAAGTGGAAAGAG+GGG + chr5_1:48140060-48140079 Msa0734340:five_prime_UTR 35.0%
ATCGAATATTGCCCTAAACT+TGG + chr5_1:48140112-48140131 Msa0734340:five_prime_UTR 35.0%
ACTCAGCTTACCCTAAATTA+CGG + chr5_1:48140223-48140242 Msa0734340:five_prime_UTR 35.0%
ACAGAGATTGAAGAGAAGTA+AGG - chr5_1:48140288-48140307 None:intergenic 35.0%
GATCTCTGATTGTAATGAGT+TGG + chr5_1:48140378-48140397 Msa0734340:five_prime_UTR 35.0%
!! CTCTTGAGGTTCTGAATATT+TGG + chr5_1:48140509-48140528 Msa0734340:five_prime_UTR 35.0%
!! CTTGAGGTTCTGAATATTTG+GGG + chr5_1:48140511-48140530 Msa0734340:five_prime_UTR 35.0%
TTGCATCGTTCCTTTAATGT+TGG - chr5_1:48140541-48140560 None:intergenic 35.0%
ATTAAAGGAACGATGCAAAG+AGG + chr5_1:48140543-48140562 Msa0734340:five_prime_UTR 35.0%
TTAAAGGAACGATGCAAAGA+GGG + chr5_1:48140544-48140563 Msa0734340:five_prime_UTR 35.0%
ATGGTGTATAAGGCAGATAA+GGG - chr5_1:48140644-48140663 None:intergenic 35.0%
! GATTTTTGCGATGGTGTATA+AGG - chr5_1:48140654-48140673 None:intergenic 35.0%
!! AGGATTGCGATTTTGATAGT+GGG + chr5_1:48141048-48141067 Msa0734340:five_prime_UTR 35.0%
!! GGATCATTTAGGTTGCAAAA+AGG + chr5_1:48141354-48141373 Msa0734340:CDS 35.0%
!! CATGTTTTTGTGCACTACAT+TGG + chr5_1:48141379-48141398 Msa0734340:CDS 35.0%
! GTTTGTCCTAAGATTTGGTT+AGG + chr5_1:48141471-48141490 Msa0734340:intron 35.0%
AGCTTGTAAAATAGCAGCAA+TGG + chr5_1:48141554-48141573 Msa0734340:CDS 35.0%
TGTTGCATATAGCAAATCCA+AGG - chr5_1:48141598-48141617 None:intergenic 35.0%
!! TTGGATTTGCTATATGCAAC+AGG + chr5_1:48141597-48141616 Msa0734340:CDS 35.0%
ATAAAAGGGACATATACCTC+TGG - chr5_1:48141642-48141661 None:intergenic 35.0%
!! CTGATTTTAGGTGATCCTTT+AGG + chr5_1:48141831-48141850 Msa0734340:intron 35.0%
!! ATCTTTCTATGGCTTTGAGT+CGG + chr5_1:48141873-48141892 Msa0734340:intron 35.0%
!! TTGGTTGGTCAAAGAGTTTT+AGG - chr5_1:48141986-48142005 None:intergenic 35.0%
TAAAACTCTTTGACCAACCA+AGG + chr5_1:48141985-48142004 Msa0734340:intron 35.0%
GAAAAAGGTTAATCCTTGGT+TGG - chr5_1:48142001-48142020 None:intergenic 35.0%
CCAAGAAAAAGGTTAATCCT+TGG - chr5_1:48142005-48142024 None:intergenic 35.0%
! CCAAGGATTAACCTTTTTCT+TGG + chr5_1:48142002-48142021 Msa0734340:intron 35.0%
TGGTTGCATAATTGATCTCT+AGG + chr5_1:48142022-48142041 Msa0734340:intron 35.0%
TATGGTGATAAGAAGATGCA+TGG - chr5_1:48142120-48142139 None:intergenic 35.0%
ATTTCTGTGCGTAATGTCTA+TGG + chr5_1:48142188-48142207 Msa0734340:intron 35.0%
AAAATTACCATCGACAGAAC+AGG + chr5_1:48142213-48142232 Msa0734340:intron 35.0%
AAATTACCATCGACAGAACA+GGG + chr5_1:48142214-48142233 Msa0734340:intron 35.0%
!! TAAGAAGGGTGTATTTTAGG+GGG - chr5_1:48142347-48142366 None:intergenic 35.0%
! CTCATTATAGGATGATTTGC+AGG + chr5_1:48142415-48142434 Msa0734340:intron 35.0%
AAGACGTTCTCTTCATCATT+AGG - chr5_1:48142655-48142674 None:intergenic 35.0%
! TGATGAAGAGAACGTCTTTT+CGG + chr5_1:48142657-48142676 Msa0734340:CDS 35.0%
!! GTGCGTGATTTTGATAATCA+GGG + chr5_1:48142707-48142726 Msa0734340:intron 35.0%
ATTAGCAAGTCTGATCATCA+AGG + chr5_1:48142752-48142771 Msa0734340:intron 35.0%
! GGATCATTTAGGTTCGAAAA+AGG + chr5_1:48143020-48143039 Msa0734340:intron 35.0%
! TCGAAAAAGGCTCATGTTTT+TGG + chr5_1:48143033-48143052 Msa0734340:CDS 35.0%
! CGAAAAAGGCTCATGTTTTT+GGG + chr5_1:48143034-48143053 Msa0734340:CDS 35.0%
!! GTTTGTTCTAAGATTCGGTT+AGG + chr5_1:48143131-48143150 Msa0734340:intron 35.0%
!! CTGATTTTAGGTGATCCTTA+AGG + chr5_1:48143491-48143510 Msa0734340:intron 35.0%
! TCGTAGTACTGCAATTTTGT+TGG + chr5_1:48143572-48143591 Msa0734340:intron 35.0%
GAAAAAGTTTAATCCTTGGC+TGG - chr5_1:48143661-48143680 None:intergenic 35.0%
! TCTTCTTCTAGAGGCAATAT+AGG - chr5_1:48142076-48142095 None:intergenic 35.0%
TACCATACATCTTCTTCTAG+AGG - chr5_1:48143745-48143764 None:intergenic 35.0%
TATGGTGATAAGAAGATGCA+TGG - chr5_1:48142120-48142139 None:intergenic 35.0%
TGTGTATACACCTCTTCATT+AGG + chr5_1:48144024-48144043 Msa0734340:intron 35.0%
TATACACCTCTTCATTAGGA+AGG + chr5_1:48144028-48144047 Msa0734340:intron 35.0%
CATGTTGTGGTTAGAACATA+TGG + chr5_1:48144122-48144141 Msa0734340:intron 35.0%
TAGAAGCTCAATCAACTCAT+GGG - chr5_1:48144188-48144207 None:intergenic 35.0%
CCTTTACGTGATCAAACATT+TGG - chr5_1:48144288-48144307 None:intergenic 35.0%
CCAAATGTTTGATCACGTAA+AGG + chr5_1:48144285-48144304 Msa0734340:intron 35.0%
TGAAATGTTTACGGAAGAGT+TGG + chr5_1:48144417-48144436 Msa0734340:intron 35.0%
AAATCGCCAATTCTGACTAT+TGG - chr5_1:48144469-48144488 None:intergenic 35.0%
TGATAGATCTTTGCCTGTAA+TGG + chr5_1:48144545-48144564 Msa0734340:intron 35.0%
CAATCTTCTACAACCATTAC+AGG - chr5_1:48144561-48144580 None:intergenic 35.0%
TTGCATCACTCCTTTAATGT+TGG - chr5_1:48144652-48144671 None:intergenic 35.0%
AACATTAAAGGAGTGATGCA+AGG + chr5_1:48144651-48144670 Msa0734340:intron 35.0%
GGACAAGATATCTCTTATTC+CGG + chr5_1:48144693-48144712 Msa0734340:intron 35.0%
ACAGTGCAGTAACAATTTCT+TGG + chr5_1:48144785-48144804 Msa0734340:intron 35.0%
GGATATCATAGGTAAGTTTG+GGG + chr5_1:48144878-48144897 Msa0734340:intron 35.0%
AACTTAAATAGCCCTAATGG+AGG - chr5_1:48144982-48145001 None:intergenic 35.0%
AATCTAAGCATGTGGTTCAA+TGG - chr5_1:48145136-48145155 None:intergenic 35.0%
! CAGGCTTTTGTTGAATTCAT+TGG + chr5_1:48145217-48145236 Msa0734340:intron 35.0%
TAGTTCTCATTCTTCCGAAA+AGG - chr5_1:48145245-48145264 None:intergenic 35.0%
! GAGCATGAAAGATCTTTTAC+TGG + chr5_1:48145267-48145286 Msa0734340:intron 35.0%
! CTTTTACTGGTAAACCTTAG+GGG + chr5_1:48145280-48145299 Msa0734340:intron 35.0%
! ACTTGCTGCTCAAAATGAAA+AGG - chr5_1:48145369-48145388 None:intergenic 35.0%
ATTAAAGCAGCTGCTAAAAC+TGG + chr5_1:48145417-48145436 Msa0734340:intron 35.0%
GTTGGAACATATATTGAGTG+AGG + chr5_1:48145867-48145886 Msa0734340:CDS 35.0%
AAGGAGCTCAATCAACTAAT+GGG - chr5_1:48145955-48145974 None:intergenic 35.0%
CAAATTGAAGCTTCAACCAA+AGG - chr5_1:48146003-48146022 None:intergenic 35.0%
ATTCCTCAAATAACTCACCT+TGG - chr5_1:48146337-48146356 None:intergenic 35.0%
TATAGTGGCACATAATCACT+TGG - chr5_1:48146591-48146610 None:intergenic 35.0%
TTGTTATATCACATCAGTGC+TGG + chr5_1:48146709-48146728 Msa0734340:intron 35.0%
!!! GTCACTATTGTTGTTTTGCT+CGG + chr5_1:48146841-48146860 Msa0734340:intron 35.0%
!!! TCACTATTGTTGTTTTGCTC+GGG + chr5_1:48146842-48146861 Msa0734340:intron 35.0%
TTGCACACAAAGAATCAGTT+TGG + chr5_1:48146906-48146925 Msa0734340:intron 35.0%
CACTACAAATTTGTGAGAGA+AGG - chr5_1:48147004-48147023 None:intergenic 35.0%
! GTTTCAAGAAGTTGCGATTT+TGG - chr5_1:48147230-48147249 None:intergenic 35.0%
AATCGCAACTTCTTGAAACA+TGG + chr5_1:48147231-48147250 Msa0734340:intron 35.0%
ATCGCAACTTCTTGAAACAT+GGG + chr5_1:48147232-48147251 Msa0734340:intron 35.0%
TAAAAGGAAGTCTTCTTGAG+TGG - chr5_1:48147684-48147703 None:intergenic 35.0%
TATTAACATGTTCGGTATCG+AGG - chr5_1:48147784-48147803 None:intergenic 35.0%
GGTTGCAAGTTAAAATGAAG+TGG - chr5_1:48147834-48147853 None:intergenic 35.0%
CAATACTCTATGGGGAAAAA+AGG - chr5_1:48148064-48148083 None:intergenic 35.0%
! AAGGCTCTTGTTTGCAAATA+TGG + chr5_1:48148112-48148131 Msa0734340:intron 35.0%
TGCCAACAAGATGATTCAAA+AGG + chr5_1:48148135-48148154 Msa0734340:intron 35.0%
! GACCTTTTGAATCATCTTGT+TGG - chr5_1:48148140-48148159 None:intergenic 35.0%
TTATAGTCGTGGAATGGAAA+TGG - chr5_1:48148216-48148235 None:intergenic 35.0%
AACTAGGTGTACCACAAAAA+TGG + chr5_1:48148620-48148639 Msa0734340:intron 35.0%
!!! GGATGACTTTTTTTATGGCA+GGG - chr5_1:48148664-48148683 None:intergenic 35.0%
!!! CTTGCGGATGACTTTTTTTA+TGG - chr5_1:48148669-48148688 None:intergenic 35.0%
TGAATGTTACTAGGAACTTG+CGG - chr5_1:48148685-48148704 None:intergenic 35.0%
!! TCTTCACCTGTTTTTCTTTG+GGG + chr5_1:48148865-48148884 Msa0734340:intron 35.0%
GTGTAGGAAGTAATTCTGTT+GGG + chr5_1:48148887-48148906 Msa0734340:intron 35.0%
TATGCATGGTGCATAAGTTA+TGG + chr5_1:48148943-48148962 Msa0734340:intron 35.0%
TCCAAAATCCCTCCTAAAAT+CGG - chr5_1:48148989-48149008 None:intergenic 35.0%
GCAACTAGGCAAAAATAAGA+CGG + chr5_1:48149035-48149054 Msa0734340:intron 35.0%
GACGGTATATTGGATTGAAA+TGG + chr5_1:48149053-48149072 Msa0734340:intron 35.0%
AGAGGCAATGGTAAGATAAA+TGG - chr5_1:48149450-48149469 None:intergenic 35.0%
AGAGGCAATGATATGAAAAC+TGG - chr5_1:48149518-48149537 None:intergenic 35.0%
CACCTCATCACTCATTAATT+AGG - chr5_1:48150142-48150161 None:intergenic 35.0%
TTGTTCAATCATACTAGCTC+AGG - chr5_1:48150323-48150342 None:intergenic 35.0%
CTACTGGCATGTATAATTGT+TGG - chr5_1:48150610-48150629 None:intergenic 35.0%
CAACAATTATACATGCCAGT+AGG + chr5_1:48150608-48150627 Msa0734340:intron 35.0%
! AACGGCTTTGATCATATCTA+AGG - chr5_1:48137686-48137705 None:intergenic 35.0%
! AAGAAGTTTTCTCTACAGGA+GGG + chr5_1:48151268-48151287 Msa0734340:intron 35.0%
!! ATTGCTGAACCAAAAGTGTT+TGG + chr5_1:48151352-48151371 Msa0734340:intron 35.0%
CAAAAACGGAATAGATGGAA+AGG - chr5_1:48138125-48138144 None:intergenic 35.0%
! CTTTCCATCTATTCCGTTTT+TGG + chr5_1:48138123-48138142 Msa0734340:five_prime_UTR 35.0%
TAACCCAAAAACGGAATAGA+TGG - chr5_1:48138130-48138149 None:intergenic 35.0%
!!! ATCTATTCCGTTTTTGGGTT+AGG + chr5_1:48138129-48138148 Msa0734340:five_prime_UTR 35.0%
TTGAAAAATGAGTTGTCGTG+TGG + chr5_1:48138444-48138463 Msa0734340:five_prime_UTR 35.0%
ATCACGAGTGGATACTAAAA+TGG - chr5_1:48138484-48138503 None:intergenic 35.0%
GAGATCGTAAAGAAATGCAA+TGG + chr5_1:48138645-48138664 Msa0734340:five_prime_UTR 35.0%
AGGCAAAATTTCTTGTGGTA+AGG - chr5_1:48152079-48152098 None:intergenic 35.0%
AAAGCAGGCAAAATTTCTTG+TGG - chr5_1:48138768-48138787 None:intergenic 35.0%
! AAGAAATTTTGCCTGCTTTG+AGG + chr5_1:48138769-48138788 Msa0734340:five_prime_UTR 35.0%
!!! GAGAAACATTGTTTTAGGGT+TGG - chr5_1:48138816-48138835 None:intergenic 35.0%
TGTGCTATATTTCCCAAAGA+TGG + chr5_1:48138840-48138859 Msa0734340:five_prime_UTR 35.0%
TTCAGGATTTCTCCATCTTT+GGG - chr5_1:48138855-48138874 None:intergenic 35.0%
! AGGAAGAATTGATTCAGCTT+TGG + chr5_1:48138874-48138893 Msa0734340:five_prime_UTR 35.0%
!! ATTCAGCTTTGGATAGCTAA+TGG + chr5_1:48152201-48152220 Msa0734340:intron 35.0%
AAGATGTTGGAAACATGGTT+TGG + chr5_1:48138937-48138956 Msa0734340:five_prime_UTR 35.0%
!! GTGTGTGCTTTTTGACAAAT+TGG - chr5_1:48152427-48152446 None:intergenic 35.0%
CTTTGTAGTCAAAACCAATG+TGG - chr5_1:48152449-48152468 None:intergenic 35.0%
CAACTGAAACAATGTTCTCA+AGG - chr5_1:48152514-48152533 None:intergenic 35.0%
! GGGAAGTTATCATGTTTTTC+TGG - chr5_1:48139233-48139252 None:intergenic 35.0%
! TTTTACGCACATCCTTTATC+CGG + chr5_1:48139273-48139292 Msa0734340:five_prime_UTR 35.0%
CATATAGTCATTGAAGGATG+TGG + chr5_1:48152786-48152805 Msa0734340:intron 35.0%
TCTCTCATGTTTCCTAACAT+TGG + chr5_1:48139500-48139519 Msa0734340:five_prime_UTR 35.0%
GATGGTAGTTTACCAAGTAA+CGG - chr5_1:48139905-48139924 None:intergenic 35.0%
ACAAAACCTACCAAACATAG+AGG + chr5_1:48153352-48153371 Msa0734340:intron 35.0%
CAAAACCTACCAAACATAGA+GGG + chr5_1:48153353-48153372 Msa0734340:intron 35.0%
AAAACCTACCAAACATAGAG+GGG + chr5_1:48153354-48153373 Msa0734340:intron 35.0%
TTCAATAACCCCTCTATGTT+TGG - chr5_1:48140049-48140068 None:intergenic 35.0%
GGTTATTGAAAGTGGAAAGA+GGG + chr5_1:48140059-48140078 Msa0734340:five_prime_UTR 35.0%
GTTATTGAAAGTGGAAAGAG+GGG + chr5_1:48140060-48140079 Msa0734340:five_prime_UTR 35.0%
! GTCTTTCTAAGTTGACAATC+TGG + chr5_1:48140095-48140114 Msa0734340:five_prime_UTR 35.0%
! TCTTTAAGAGATGGAAGACA+TGG - chr5_1:48153461-48153480 None:intergenic 35.0%
ACAGAGATTGAAGAGAAGTA+AGG - chr5_1:48140288-48140307 None:intergenic 35.0%
TATCTTTGGTTGTCATCAGT+TGG + chr5_1:48153628-48153647 Msa0734340:intron 35.0%
ACGAAGACATAGATATCGAA+GGG - chr5_1:48153690-48153709 None:intergenic 35.0%
!! ATTCTCGTTGTTGACTTCTT+TGG + chr5_1:48154070-48154089 Msa0734340:intron 35.0%
! TTTTACTGTTCAACCTCAGA+AGG + chr5_1:48154134-48154153 Msa0734340:intron 35.0%
GGAGATTGAATTGAATGGTT+AGG + chr5_1:48154245-48154264 Msa0734340:intron 35.0%
! AGGATTGTCTAAAACACACA+AGG + chr5_1:48154265-48154284 Msa0734340:intron 35.0%
! GGATTGTCTAAAACACACAA+GGG + chr5_1:48154266-48154285 Msa0734340:intron 35.0%
ATCATTAGGTACGTTTGTTC+CGG - chr5_1:48142641-48142660 None:intergenic 35.0%
CTTCTCAGCATCTTCAAGAA+CGG - chr5_1:48137704-48137723 None:intergenic 40.0%
TACCTTAATAGAGCAGTCTG+TGG - chr5_1:48137734-48137753 None:intergenic 40.0%
CAGACTGCTCTATTAAGGTA+TGG + chr5_1:48137734-48137753 Msa0734340:five_prime_UTR 40.0%
ACTTGATCGAACACTCATCA+AGG - chr5_1:48137801-48137820 None:intergenic 40.0%
ATCAAGTCTGGTAGACTTAG+AGG + chr5_1:48137814-48137833 Msa0734340:five_prime_UTR 40.0%
CTAAAGTTTCGCCATGAGAT+CGG + chr5_1:48137877-48137896 Msa0734340:five_prime_UTR 40.0%
GGTTGGATGATATTGCTGAA+AGG + chr5_1:48137926-48137945 Msa0734340:five_prime_UTR 40.0%
TGGATGATATTGCTGAAAGG+AGG + chr5_1:48137929-48137948 Msa0734340:five_prime_UTR 40.0%
!!! TTTTTTCTACAGGAGGGTAC+TGG + chr5_1:48137958-48137977 Msa0734340:five_prime_UTR 40.0%
GCCATTCAGCTACTTCATTT+GGG - chr5_1:48137999-48138018 None:intergenic 40.0%
! TCTTCTCGTCCAAACACTTT+TGG - chr5_1:48138048-48138067 None:intergenic 40.0%
GGAATAGATGGAAAGGAAGT+CGG - chr5_1:48138118-48138137 None:intergenic 40.0%
!!! TATTCCGTTTTTGGGTTAGG+TGG + chr5_1:48138132-48138151 Msa0734340:five_prime_UTR 40.0%
AAGACCACCTAACCCAAAAA+CGG - chr5_1:48138139-48138158 None:intergenic 40.0%
AGGGTGCAAGAATTATTGCA+AGG + chr5_1:48138336-48138355 Msa0734340:five_prime_UTR 40.0%
!!! TGCTAGTTTTGGATGATGTG+TGG + chr5_1:48138370-48138389 Msa0734340:five_prime_UTR 40.0%
! CTGGGTTGACAGAAGATAAA+TGG + chr5_1:48138415-48138434 Msa0734340:five_prime_UTR 40.0%
TTTAGTATCCACTCGTGATG+AGG + chr5_1:48138485-48138504 Msa0734340:five_prime_UTR 40.0%
TTGCAACAATCACAGGAACA+TGG + chr5_1:48138511-48138530 Msa0734340:five_prime_UTR 40.0%
TGCAACAATCACAGGAACAT+GGG + chr5_1:48138512-48138531 Msa0734340:five_prime_UTR 40.0%
CATCAGAGAGACCAGATAAA+CGG - chr5_1:48138545-48138564 None:intergenic 40.0%
CAAGGAATGAAGAAGAGGAA+TGG + chr5_1:48138709-48138728 Msa0734340:five_prime_UTR 40.0%
AGGCAAAATTTCTTGCGGTA+AGG - chr5_1:48138763-48138782 None:intergenic 40.0%
AAGTAACTCAACCTCAAAGC+AGG - chr5_1:48138783-48138802 None:intergenic 40.0%
CTTCAGGATTTCTCCATCTT+TGG - chr5_1:48138856-48138875 None:intergenic 40.0%
CAAAGATGGAGAAATCCTGA+AGG + chr5_1:48138854-48138873 Msa0734340:five_prime_UTR 40.0%
GCTGAATCAATTCTTCCTTC+AGG - chr5_1:48138872-48138891 None:intergenic 40.0%
!! ATTCAGCTTTGGATGGCTAA+TGG + chr5_1:48138885-48138904 Msa0734340:five_prime_UTR 40.0%
GGTTGAAGATGTTGGAAACA+TGG + chr5_1:48138932-48138951 Msa0734340:five_prime_UTR 40.0%
! TGTTGGAAACATGGTTTGGA+AGG + chr5_1:48138941-48138960 Msa0734340:five_prime_UTR 40.0%
! TTACTGATTGAGCGAGATCA+TGG - chr5_1:48139049-48139068 None:intergenic 40.0%
TGATCTCGCTCAATCAGTAA+TGG + chr5_1:48139049-48139068 Msa0734340:five_prime_UTR 40.0%
GATCTCGCTCAATCAGTAAT+GGG + chr5_1:48139050-48139069 Msa0734340:five_prime_UTR 40.0%
ATCTCGCTCAATCAGTAATG+GGG + chr5_1:48139051-48139070 Msa0734340:five_prime_UTR 40.0%
GGGGCAAGAATGTATGTATT+TGG + chr5_1:48139070-48139089 Msa0734340:five_prime_UTR 40.0%
!! GTGTGTGCTTTTTGACAAAC+TGG - chr5_1:48139111-48139130 None:intergenic 40.0%
! TCAAAAAGCACACACCACAT+CGG + chr5_1:48139116-48139135 Msa0734340:five_prime_UTR 40.0%
CTTTGTAGTCAAAACCGATG+TGG - chr5_1:48139133-48139152 None:intergenic 40.0%
TCCCAACATACCTTTCTCTT+CGG + chr5_1:48139249-48139268 Msa0734340:five_prime_UTR 40.0%
GGAAACATGAGAGACAAAGA+TGG - chr5_1:48139494-48139513 None:intergenic 40.0%
GAGTTACGTGATCTAAACCT+CGG + chr5_1:48139590-48139609 Msa0734340:five_prime_UTR 40.0%
! CAGTTTATCTGAAGCTCAAG+CGG + chr5_1:48139649-48139668 Msa0734340:five_prime_UTR 40.0%
AAGCACTTGAGATTTGAGTG+AGG - chr5_1:48139779-48139798 None:intergenic 40.0%
TCACTCAAATCTCAAGTGCT+TGG + chr5_1:48139778-48139797 Msa0734340:five_prime_UTR 40.0%
! CTTGGATGATGATGAATCTC+AGG + chr5_1:48139967-48139986 Msa0734340:five_prime_UTR 40.0%
! GATGATGATGAATCTCAGGA+TGG + chr5_1:48139971-48139990 Msa0734340:five_prime_UTR 40.0%
TGATGAATCTCAGGATGGTA+TGG + chr5_1:48139976-48139995 Msa0734340:five_prime_UTR 40.0%
ACGATTCCTACCAAACATAG+AGG + chr5_1:48140036-48140055 Msa0734340:five_prime_UTR 40.0%
CGATTCCTACCAAACATAGA+GGG + chr5_1:48140037-48140056 Msa0734340:five_prime_UTR 40.0%
GATTCCTACCAAACATAGAG+GGG + chr5_1:48140038-48140057 Msa0734340:five_prime_UTR 40.0%
ATAACCCCTCTATGTTTGGT+AGG - chr5_1:48140045-48140064 None:intergenic 40.0%
CATAGAGGGGTTATTGAAAG+TGG + chr5_1:48140051-48140070 Msa0734340:five_prime_UTR 40.0%
GGGTTATTGAAAGTGGAAAG+AGG + chr5_1:48140058-48140077 Msa0734340:five_prime_UTR 40.0%
ACTTTCAGAGATGGAAGACA+TGG - chr5_1:48140142-48140161 None:intergenic 40.0%
!! TCTGAAAGTGCTGGATGTAA+CGG + chr5_1:48140153-48140172 Msa0734340:five_prime_UTR 40.0%
GATGTAACAACGAGTTACTG+AGG + chr5_1:48140176-48140195 Msa0734340:five_prime_UTR 40.0%
CTTACCCTAAATTACGGTGA+AGG + chr5_1:48140229-48140248 Msa0734340:five_prime_UTR 40.0%
AGTCCTTACCAGAGCAAATT+TGG + chr5_1:48140401-48140420 Msa0734340:five_prime_UTR 40.0%
GTCCTTACCAGAGCAAATTT+GGG + chr5_1:48140402-48140421 Msa0734340:five_prime_UTR 40.0%
! TTCCCAAATTTGCTCTGGTA+AGG - chr5_1:48140407-48140426 None:intergenic 40.0%
TTACCAGAGCAAATTTGGGA+AGG + chr5_1:48140406-48140425 Msa0734340:five_prime_UTR 40.0%
CCAAATCTGTAGAGTCCTAA+GGG - chr5_1:48140440-48140459 None:intergenic 40.0%
CCTTAGGACTCTACAGATTT+GGG + chr5_1:48140438-48140457 Msa0734340:five_prime_UTR 40.0%
CTTAGGACTCTACAGATTTG+GGG + chr5_1:48140439-48140458 Msa0734340:five_prime_UTR 40.0%
TTGGGGATGTCCAACATTAA+AGG + chr5_1:48140528-48140547 Msa0734340:five_prime_UTR 40.0%
GATGGTGTATAAGGCAGATA+AGG - chr5_1:48140645-48140664 None:intergenic 40.0%
GTTAATCCCTTGTGTGTTGA+AGG - chr5_1:48140947-48140966 None:intergenic 40.0%
CGTTCGTTCTCTTCATCATT+AGG - chr5_1:48140983-48141002 None:intergenic 40.0%
! TGAAGAGAACGAACGTCTTT+TGG + chr5_1:48140988-48141007 Msa0734340:five_prime_UTR 40.0%
!! GAGGATTGCGATTTTGATAG+TGG + chr5_1:48141047-48141066 Msa0734340:five_prime_UTR 40.0%
!!! GGATTGCGATTTTGATAGTG+GGG + chr5_1:48141049-48141068 Msa0734340:five_prime_UTR 40.0%
!!! GATTGCGATTTTGATAGTGG+GGG + chr5_1:48141050-48141069 Msa0734340:five_prime_UTR 40.0%
!! TGATGATCAGACTTGCTACT+GGG - chr5_1:48141095-48141114 None:intergenic 40.0%
!! TTGATGATCAGACTTGCTAC+TGG - chr5_1:48141096-48141115 None:intergenic 40.0%
AGTAGCAAGTCTGATCATCA+AGG + chr5_1:48141095-48141114 Msa0734340:five_prime_UTR 40.0%
CAGAACAAAGATCATGCCAA+AGG + chr5_1:48141315-48141334 Msa0734340:exon 40.0%
ATGGGGTTTGTCCTAAGATT+TGG + chr5_1:48141466-48141485 Msa0734340:intron 40.0%
!! GATTTGCTATATGCAACAGG+TGG + chr5_1:48141600-48141619 Msa0734340:CDS 40.0%
TCAATGCTCTAATCACAGTG+AGG - chr5_1:48141695-48141714 None:intergenic 40.0%
AATTACCATCGACAGAACAG+GGG + chr5_1:48142215-48142234 Msa0734340:intron 40.0%
ATGGTGATTGAGGCAGATAA+GGG - chr5_1:48142299-48142318 None:intergenic 40.0%
! GATTTTTGCGATGGTGATTG+AGG - chr5_1:48142309-48142328 None:intergenic 40.0%
!! CGGCAGATAAATGGATTAAC+TGG + chr5_1:48142619-48142638 Msa0734340:CDS 40.0%
! GATGAAGAGAACGTCTTTTC+GGG + chr5_1:48142658-48142677 Msa0734340:CDS 40.0%
!! GGTGCGTGATTTTGATAATC+AGG + chr5_1:48142706-48142725 Msa0734340:intron 40.0%
!! TGATTTTGATAATCAGGGCG+TGG + chr5_1:48142712-48142731 Msa0734340:intron 40.0%
!! GATTTTGATAATCAGGGCGT+GGG + chr5_1:48142713-48142732 Msa0734340:intron 40.0%
TTGGTGCAGAACAAAGATCA+TGG + chr5_1:48142975-48142994 Msa0734340:intron 40.0%
CAGAACAAAGATCATGGCAA+AGG + chr5_1:48142981-48143000 Msa0734340:intron 40.0%
!!! TCATGTTTTTGGGCACTCAA+TGG + chr5_1:48143044-48143063 Msa0734340:CDS 40.0%
!!! CATGTTTTTGGGCACTCAAT+GGG + chr5_1:48143045-48143064 Msa0734340:CDS 40.0%
CTTGCCTTTGCTAAATGCAA+CGG + chr5_1:48143258-48143277 Msa0734340:CDS 40.0%
TTGCCTTTGCTAAATGCAAC+GGG + chr5_1:48143259-48143278 Msa0734340:CDS 40.0%
CAAACTTAGTTCAGGACAAG+TGG + chr5_1:48143435-48143454 Msa0734340:intron 40.0%
!! TTGGCTGGTCAAAGAGTTTT+AGG - chr5_1:48143646-48143665 None:intergenic 40.0%
TAAAACTCTTTGACCAGCCA+AGG + chr5_1:48143645-48143664 Msa0734340:intron 40.0%
TGGTTGCCTATTTGATCTCT+AGG + chr5_1:48143682-48143701 Msa0734340:intron 40.0%
! TGCCTCTAGAAGAAGATGTA+TGG + chr5_1:48143740-48143759 Msa0734340:intron 40.0%
! CAACTACAGCATTTTCTCAC+AGG + chr5_1:48143895-48143914 Msa0734340:intron 40.0%
ATGACACCTTCCTAATGAAG+AGG - chr5_1:48144037-48144056 None:intergenic 40.0%
TTCATGATGCTAGAGTGACT+TGG + chr5_1:48144062-48144081 Msa0734340:intron 40.0%
TGTGTCCGATAAACATGTTG+TGG + chr5_1:48144109-48144128 Msa0734340:intron 40.0%
GTAGAAGCTCAATCAACTCA+TGG - chr5_1:48144189-48144208 None:intergenic 40.0%
TTGATCACGTAAAGGTAACC+TGG + chr5_1:48144293-48144312 Msa0734340:intron 40.0%
TGATCACGTAAAGGTAACCT+GGG + chr5_1:48144294-48144313 Msa0734340:intron 40.0%
AAGATTGAGATGCTTTCCTG+AGG + chr5_1:48144574-48144593 Msa0734340:intron 40.0%
AGATTGAGATGCTTTCCTGA+GGG + chr5_1:48144575-48144594 Msa0734340:intron 40.0%
ATTAAAGGAGTGATGCAAGG+AGG + chr5_1:48144654-48144673 Msa0734340:intron 40.0%
CAACATCAACTGCGTAATTC+CGG - chr5_1:48144715-48144734 None:intergenic 40.0%
! ATTACGCAGTTGATGTTGGT+AGG + chr5_1:48144717-48144736 Msa0734340:intron 40.0%
TTTCTTGGTACTCTCTTTGC+AGG + chr5_1:48144800-48144819 Msa0734340:intron 40.0%
TGAAAAGGCTTTCCTCCATT+AGG + chr5_1:48144967-48144986 Msa0734340:intron 40.0%
GAAAAGGCTTTCCTCCATTA+GGG + chr5_1:48144968-48144987 Msa0734340:intron 40.0%
GAGCATGAAATCTAAGCATG+TGG - chr5_1:48145144-48145163 None:intergenic 40.0%
AATCGCGCAGGTAATGTATT+AGG + chr5_1:48145315-48145334 Msa0734340:intron 40.0%
AAGGTGTAGAGAATGTGACA+TGG + chr5_1:48145447-48145466 Msa0734340:intron 40.0%
AGGTGTAGAGAATGTGACAT+GGG + chr5_1:48145448-48145467 Msa0734340:intron 40.0%
GTATCATGAAAGCCAAGCTT+CGG + chr5_1:48145506-48145525 Msa0734340:intron 40.0%
TATCATGAAAGCCAAGCTTC+GGG + chr5_1:48145507-48145526 Msa0734340:intron 40.0%
TGGTTGAAGAATGTGAGAAG+AGG + chr5_1:48145735-48145754 Msa0734340:intron 40.0%
ATGTGTGTAAGGCTCTACAA+TGG + chr5_1:48145905-48145924 Msa0734340:intron 40.0%
AGGAGCTCAATCAACTAATG+GGG - chr5_1:48145954-48145973 None:intergenic 40.0%
GAAGGAGCTCAATCAACTAA+TGG - chr5_1:48145956-48145975 None:intergenic 40.0%
TGTGCAGTACAATCTGTTGA+AGG - chr5_1:48145974-48145993 None:intergenic 40.0%
TGTCCAAGGTGAGTTATTTG+AGG + chr5_1:48146331-48146350 Msa0734340:intron 40.0%
AATCTACCTCCAGTTGGAAT+TGG + chr5_1:48146560-48146579 Msa0734340:intron 40.0%
!!! CACTATTGTTGTTTTGCTCG+GGG + chr5_1:48146843-48146862 Msa0734340:intron 40.0%
TTGCTTGGTCAAAATTGACC+TGG + chr5_1:48147144-48147163 Msa0734340:intron 40.0%
TGCTTGGTCAAAATTGACCT+GGG + chr5_1:48147145-48147164 Msa0734340:intron 40.0%
TGCAAAAGGGGCAATACTTA+TGG + chr5_1:48147176-48147195 Msa0734340:intron 40.0%
GCAAAAGGGGCAATACTTAT+GGG + chr5_1:48147177-48147196 Msa0734340:intron 40.0%
TCGCAACTTCTTGAAACATG+GGG + chr5_1:48147233-48147252 Msa0734340:intron 40.0%
!!! TCGGTATCGAGGTTTTGTTT+GGG - chr5_1:48147773-48147792 None:intergenic 40.0%
!!! TTCGGTATCGAGGTTTTGTT+TGG - chr5_1:48147774-48147793 None:intergenic 40.0%
TTGCAAACAAGAGCCTTAAG+CGG - chr5_1:48148109-48148128 None:intergenic 40.0%
! CAAAAGGTCTCTTTTCCACA+TGG + chr5_1:48148151-48148170 Msa0734340:intron 40.0%
ACGAATGTATATGCTCCATG+TGG - chr5_1:48148169-48148188 None:intergenic 40.0%
GAAATGGAAGTCTGATGAGA+GGG - chr5_1:48148200-48148219 None:intergenic 40.0%
!!! CGGATGACTTTTTTTATGGC+AGG - chr5_1:48148665-48148684 None:intergenic 40.0%
CACGCGTTAGTAGGAAATTA+TGG - chr5_1:48148818-48148837 None:intergenic 40.0%
GGTGTAGGAAGTAATTCTGT+TGG + chr5_1:48148886-48148905 Msa0734340:intron 40.0%
!! ATAATGGGTTGGACTAATGC+AGG + chr5_1:48148918-48148937 Msa0734340:intron 40.0%
! TGATAACCACACCCGATTTT+AGG + chr5_1:48148974-48148993 Msa0734340:intron 40.0%
CCAAAATCCCTCCTAAAATC+GGG - chr5_1:48148988-48149007 None:intergenic 40.0%
CACTCGCATATATTCCAATG+TGG - chr5_1:48149016-48149035 None:intergenic 40.0%
GAATATATGCGAGTGCAACT+AGG + chr5_1:48149021-48149040 Msa0734340:intron 40.0%
TTGAAGGCAACGAAATCTGT+TGG + chr5_1:48149188-48149207 Msa0734340:intron 40.0%
!! AATGAGTGATGAGGTGTTGA+CGG + chr5_1:48150146-48150165 Msa0734340:intron 40.0%
!! GGTGTTGACGGAAAAATTTG+AGG + chr5_1:48150158-48150177 Msa0734340:intron 40.0%
GGTGGTCATTCACTGATATT+TGG - chr5_1:48150437-48150456 None:intergenic 40.0%
! TTCATTCCAGTTCTGGTGTA+AGG - chr5_1:48150458-48150477 None:intergenic 40.0%
TTTATGAATCCAGACCCTAC+TGG - chr5_1:48150626-48150645 None:intergenic 40.0%
ACAAACACCCCATCTCTTAA+TGG + chr5_1:48150681-48150700 Msa0734340:intron 40.0%
!! TAGTAGATTGGAGTGTTGGT+AGG - chr5_1:48150742-48150761 None:intergenic 40.0%
CCATTAGTAGATTGGAGTGT+TGG - chr5_1:48150746-48150765 None:intergenic 40.0%
CCAACACTCCAATCTACTAA+TGG + chr5_1:48150743-48150762 Msa0734340:intron 40.0%
TCACGGTTCCATTAGTAGAT+TGG - chr5_1:48150754-48150773 None:intergenic 40.0%
!!! AAAGGGATCGGCCATTTTTA+GGG - chr5_1:48150915-48150934 None:intergenic 40.0%
CTTCTCAGCATCTTCAAGAA+CGG - chr5_1:48137704-48137723 None:intergenic 40.0%
AGTCACAGACTGCTCTATTA+AGG + chr5_1:48151075-48151094 Msa0734340:intron 40.0%
CAGACTGCTCTATTAAGGTA+TGG + chr5_1:48137734-48137753 Msa0734340:five_prime_UTR 40.0%
! AACAGGTTGGAAGAGATTAC+AGG + chr5_1:48151217-48151236 Msa0734340:intron 40.0%
! ACAGGTTGGAAGAGATTACA+GGG + chr5_1:48151218-48151237 Msa0734340:intron 40.0%
GGTTGGATGATATTGCTGAT+AGG + chr5_1:48151242-48151261 Msa0734340:intron 40.0%
TGGATGATATTGCTGATAGG+AGG + chr5_1:48151245-48151264 Msa0734340:intron 40.0%
! GAGGAAGAAGTTTTCTCTAC+AGG + chr5_1:48151264-48151283 Msa0734340:intron 40.0%
! GAAGAAGTTTTCTCTACAGG+AGG + chr5_1:48151267-48151286 Msa0734340:intron 40.0%
GCCATTCAGCTACTTCATTT+GGG - chr5_1:48137999-48138018 None:intergenic 40.0%
! TCTTCTCGTCCAAACACTTT+TGG - chr5_1:48138048-48138067 None:intergenic 40.0%
GGAATAGATGGAAAGGAAGT+CGG - chr5_1:48138118-48138137 None:intergenic 40.0%
!!! TATTCCGTTTTTGGGTTAGG+TGG + chr5_1:48138132-48138151 Msa0734340:five_prime_UTR 40.0%
AAGACCACCTAACCCAAAAA+CGG - chr5_1:48138139-48138158 None:intergenic 40.0%
AGGGTGCAAGAATTATTGCA+AGG + chr5_1:48138336-48138355 Msa0734340:five_prime_UTR 40.0%
!!! TGCTAGTTTTGGATGATGTG+TGG + chr5_1:48138370-48138389 Msa0734340:five_prime_UTR 40.0%
! CTGGGTTGACAGAAGATAAA+TGG + chr5_1:48138415-48138434 Msa0734340:five_prime_UTR 40.0%
TTTAGTATCCACTCGTGATG+AGG + chr5_1:48138485-48138504 Msa0734340:five_prime_UTR 40.0%
TTGCAACAATCACAGGAACA+TGG + chr5_1:48138511-48138530 Msa0734340:five_prime_UTR 40.0%
TGCAACAATCACAGGAACAT+GGG + chr5_1:48138512-48138531 Msa0734340:five_prime_UTR 40.0%
CAACAACCAGCATTCATCAT+CGG - chr5_1:48138562-48138581 None:intergenic 40.0%
CAAGGAATGAAGAAGAGGAA+TGG + chr5_1:48138709-48138728 Msa0734340:five_prime_UTR 40.0%
AAGTAACTCAACCTCAAAGC+AGG - chr5_1:48138783-48138802 None:intergenic 40.0%
CTTCAGGATTTCTCCATCTT+TGG - chr5_1:48138856-48138875 None:intergenic 40.0%
CAAAGATGGAGAAATCCTGA+AGG + chr5_1:48138854-48138873 Msa0734340:five_prime_UTR 40.0%
GCTGAATCAATTCTTCCTTC+AGG - chr5_1:48138872-48138891 None:intergenic 40.0%
GGTTGAAGATGTTGGAAACA+TGG + chr5_1:48138932-48138951 Msa0734340:five_prime_UTR 40.0%
! TGTTGGAAACATGGTTTGGA+AGG + chr5_1:48138941-48138960 Msa0734340:five_prime_UTR 40.0%
! TTACTGATTGAGCGAGATCA+TGG - chr5_1:48139049-48139068 None:intergenic 40.0%
TGATCTCGCTCAATCAGTAA+TGG + chr5_1:48139049-48139068 Msa0734340:five_prime_UTR 40.0%
GATCTCGCTCAATCAGTAAT+GGG + chr5_1:48139050-48139069 Msa0734340:five_prime_UTR 40.0%
ATCTCGCTCAATCAGTAATG+GGG + chr5_1:48139051-48139070 Msa0734340:five_prime_UTR 40.0%
GGGGCAAGAATGTATGTATT+TGG + chr5_1:48139070-48139089 Msa0734340:five_prime_UTR 40.0%
! TCAAAAAGCACACACCACAT+TGG + chr5_1:48139116-48139135 Msa0734340:five_prime_UTR 40.0%
TCCCAACATACCTTTCTCTT+CGG + chr5_1:48139249-48139268 Msa0734340:five_prime_UTR 40.0%
TGAATTAAACCCCCTAGTGA+TGG - chr5_1:48152618-48152637 None:intergenic 40.0%
GAGTTACGTGATCTAAACCT+CGG + chr5_1:48139590-48139609 Msa0734340:five_prime_UTR 40.0%
! CAGTTTATCTGAAGCTCAAG+CGG + chr5_1:48139649-48139668 Msa0734340:five_prime_UTR 40.0%
CTCAGCACTAGTAATAGTTG+GGG - chr5_1:48153051-48153070 None:intergenic 40.0%
GCTCAGCACTAGTAATAGTT+GGG - chr5_1:48153052-48153071 None:intergenic 40.0%
TGCTCAGCACTAGTAATAGT+TGG - chr5_1:48153053-48153072 None:intergenic 40.0%
AAGCACTTGAGATTTGAGTG+AGG - chr5_1:48139779-48139798 None:intergenic 40.0%
TCACTCAAATCTCAAGTGCT+TGG + chr5_1:48139778-48139797 Msa0734340:five_prime_UTR 40.0%
! CTTGGATGATGATGAATCTC+AGG + chr5_1:48139967-48139986 Msa0734340:five_prime_UTR 40.0%
! GATGATGATGAATCTCAGGA+TGG + chr5_1:48139971-48139990 Msa0734340:five_prime_UTR 40.0%
TGATGAATCTCAGGATGGTA+TGG + chr5_1:48139976-48139995 Msa0734340:five_prime_UTR 40.0%
ATATGAGTACCTCCAGAGAT+GGG - chr5_1:48153331-48153350 None:intergenic 40.0%
AATATGAGTACCTCCAGAGA+TGG - chr5_1:48153332-48153351 None:intergenic 40.0%
ATAACCCCTCTATGTTTGGT+AGG - chr5_1:48140045-48140064 None:intergenic 40.0%
CATAGAGGGGTTATTGAAAG+TGG + chr5_1:48140051-48140070 Msa0734340:five_prime_UTR 40.0%
GGGTTATTGAAAGTGGAAAG+AGG + chr5_1:48140058-48140077 Msa0734340:five_prime_UTR 40.0%
! ATCTGGAATTGCCCTAAACT+TGG + chr5_1:48153428-48153447 Msa0734340:intron 40.0%
TATTCCTTCACCCTTCCTTA+GGG - chr5_1:48153555-48153574 None:intergenic 40.0%
TTATTCCTTCACCCTTCCTT+AGG - chr5_1:48153556-48153575 None:intergenic 40.0%
AGTCCTTACCAGAGCAAAAT+TGG + chr5_1:48153651-48153670 Msa0734340:CDS 40.0%
GTCCTTACCAGAGCAAAATT+GGG + chr5_1:48153652-48153671 Msa0734340:CDS 40.0%
! TTCCCAATTTTGCTCTGGTA+AGG - chr5_1:48153657-48153676 None:intergenic 40.0%
TTACCAGAGCAAAATTGGGA+AGG + chr5_1:48153656-48153675 Msa0734340:CDS 40.0%
CACGAAGACATAGATATCGA+AGG - chr5_1:48153691-48153710 None:intergenic 40.0%
CTATGTCTTCGTGAGTGTAA+AGG + chr5_1:48153698-48153717 Msa0734340:CDS 40.0%
TCTTGAGCTTCTGACTATCA+AGG + chr5_1:48153760-48153779 Msa0734340:intron 40.0%
TCAGATTCTCAAGAGAAGTG+AGG - chr5_1:48153826-48153845 None:intergenic 40.0%
CGTTAATTGCCCAACATTAG+AGG + chr5_1:48153850-48153869 Msa0734340:intron 40.0%
TGCATCGTTCCTCTAATGTT+GGG - chr5_1:48153862-48153881 None:intergenic 40.0%
TTGCATCGTTCCTCTAATGT+TGG - chr5_1:48153863-48153882 None:intergenic 40.0%
ATTAGAGGAACGATGCAAAG+AGG + chr5_1:48153865-48153884 Msa0734340:intron 40.0%
TTAGAGGAACGATGCAAAGA+GGG + chr5_1:48153866-48153885 Msa0734340:intron 40.0%
! GATTTTTGCGATGGTGATTG+AGG - chr5_1:48142309-48142328 None:intergenic 40.0%
CGACAAATGACAGGATTAAC+CGG + chr5_1:48154295-48154314 Msa0734340:CDS 40.0%
!!! GAAAACGTCTTTTGGAGTAG+AGG + chr5_1:48154340-48154359 Msa0734340:CDS 40.0%
TGAGTAGGAAGTCAGCAAGT+AGG - chr5_1:48137449-48137468 None:intergenic 45.0%
!! GAATGAGTGCTGAACTATGC+AGG - chr5_1:48137496-48137515 None:intergenic 45.0%
AGCCACAGACTGCTCTATTA+AGG + chr5_1:48137729-48137748 Msa0734340:five_prime_UTR 45.0%
GATGAGTGTTCGATCAAGTC+TGG + chr5_1:48137802-48137821 Msa0734340:five_prime_UTR 45.0%
! CTCATGGCGAAACTTTAGAG+AGG - chr5_1:48137875-48137894 None:intergenic 45.0%
TCAACCTGTTACCGATCTCA+TGG - chr5_1:48137891-48137910 None:intergenic 45.0%
GGTTGAAAGAGATTACAGGG+AGG + chr5_1:48137905-48137924 Msa0734340:five_prime_UTR 45.0%
GAAAGAGATTACAGGGAGGT+TGG + chr5_1:48137909-48137928 Msa0734340:five_prime_UTR 45.0%
GCCCAAATGAAGTAGCTGAA+TGG + chr5_1:48137995-48138014 Msa0734340:five_prime_UTR 45.0%
CGCCATTCAGCTACTTCATT+TGG - chr5_1:48138000-48138019 None:intergenic 45.0%
!!! GTTTTTGGGTTAGGTGGTCT+TGG + chr5_1:48138138-48138157 Msa0734340:five_prime_UTR 45.0%
GAGTTGTCGTGTGGATCAAA+AGG + chr5_1:48138453-48138472 Msa0734340:five_prime_UTR 45.0%
GAGGTTGTTGCAACAATCAC+AGG + chr5_1:48138504-48138523 Msa0734340:five_prime_UTR 45.0%
TGGGAAACTCACCGTTTATC+TGG + chr5_1:48138531-48138550 Msa0734340:five_prime_UTR 45.0%
! GTCTCTCTGATGATGAATGC+TGG + chr5_1:48138553-48138572 Msa0734340:five_prime_UTR 45.0%
TGGGAGGTTTAATGAGCTCA+AGG + chr5_1:48138691-48138710 Msa0734340:five_prime_UTR 45.0%
GAGCTCAAGGAATGAAGAAG+AGG + chr5_1:48138704-48138723 Msa0734340:five_prime_UTR 45.0%
! CCCGAAGAGAAAGGTATGTT+GGG - chr5_1:48139253-48139272 None:intergenic 45.0%
CCCAACATACCTTTCTCTTC+GGG + chr5_1:48139250-48139269 Msa0734340:five_prime_UTR 45.0%
! ACCCGAAGAGAAAGGTATGT+TGG - chr5_1:48139254-48139273 None:intergenic 45.0%
TGCGTAAAACCCGAAGAGAA+AGG - chr5_1:48139262-48139281 None:intergenic 45.0%
ATCCATATGCCATCACTAGG+AGG + chr5_1:48139290-48139309 Msa0734340:five_prime_UTR 45.0%
AACCTCCTAGTGATGGCATA+TGG - chr5_1:48139295-48139314 None:intergenic 45.0%
! GTAAGCAAGCCAAGCGTTTT+GGG - chr5_1:48139439-48139458 None:intergenic 45.0%
! TGTAAGCAAGCCAAGCGTTT+TGG - chr5_1:48139440-48139459 None:intergenic 45.0%
TTACGTGATCTAAACCTCGG+TGG + chr5_1:48139593-48139612 Msa0734340:five_prime_UTR 45.0%
GGTGGAAAACTGCGTATTGA+AGG + chr5_1:48139611-48139630 Msa0734340:five_prime_UTR 45.0%
AGCTCAAGCGGCTAATTTGA+AGG + chr5_1:48139661-48139680 Msa0734340:five_prime_UTR 45.0%
GCTCAAGCGGCTAATTTGAA+GGG + chr5_1:48139662-48139681 Msa0734340:five_prime_UTR 45.0%
CCCAGCACTAGTAATAGTTG+GGG - chr5_1:48139735-48139754 None:intergenic 45.0%
CCCCAACTATTACTAGTGCT+GGG + chr5_1:48139732-48139751 Msa0734340:five_prime_UTR 45.0%
GCCCAGCACTAGTAATAGTT+GGG - chr5_1:48139736-48139755 None:intergenic 45.0%
TGCCCAGCACTAGTAATAGT+TGG - chr5_1:48139737-48139756 None:intergenic 45.0%
TGAATCTCAGGATGGTATGG+AGG + chr5_1:48139979-48139998 Msa0734340:five_prime_UTR 45.0%
ATTCGAGTACCTCCAGAGAT+GGG - chr5_1:48140015-48140034 None:intergenic 45.0%
AATTCGAGTACCTCCAGAGA+TGG - chr5_1:48140016-48140035 None:intergenic 45.0%
GACATGGCAGTCCAAGTTTA+GGG - chr5_1:48140126-48140145 None:intergenic 45.0%
AGACATGGCAGTCCAAGTTT+AGG - chr5_1:48140127-48140146 None:intergenic 45.0%
! TCTTCCATCTCTGAAAGTGC+TGG + chr5_1:48140144-48140163 Msa0734340:five_prime_UTR 45.0%
ACATCCAGCACTTTCAGAGA+TGG - chr5_1:48140151-48140170 None:intergenic 45.0%
!! CTGAAAGTGCTGGATGTAAC+GGG + chr5_1:48140154-48140173 Msa0734340:five_prime_UTR 45.0%
AGGAATAACATCCTTCCCAG+AGG + chr5_1:48140249-48140268 Msa0734340:five_prime_UTR 45.0%
GGAATAACATCCTTCCCAGA+GGG + chr5_1:48140250-48140269 Msa0734340:five_prime_UTR 45.0%
GAATAACATCCTTCCCAGAG+GGG + chr5_1:48140251-48140270 Msa0734340:five_prime_UTR 45.0%
! GGTTTTTGAACATCCCCTCT+GGG - chr5_1:48140267-48140286 None:intergenic 45.0%
! AGGTTTTTGAACATCCCCTC+TGG - chr5_1:48140268-48140287 None:intergenic 45.0%
GCTGGGTTAAAGGGTTCATT+TGG - chr5_1:48140343-48140362 None:intergenic 45.0%
! ACCCTTTAACCCAGCTTTGA+CGG + chr5_1:48140348-48140367 Msa0734340:five_prime_UTR 45.0%
TCCGTCAAAGCTGGGTTAAA+GGG - chr5_1:48140352-48140371 None:intergenic 45.0%
ATCCGTCAAAGCTGGGTTAA+AGG - chr5_1:48140353-48140372 None:intergenic 45.0%
! AGACCTTCCCAAATTTGCTC+TGG - chr5_1:48140412-48140431 None:intergenic 45.0%
CCCTTAGGACTCTACAGATT+TGG + chr5_1:48140437-48140456 Msa0734340:five_prime_UTR 45.0%
CCCAAATCTGTAGAGTCCTA+AGG - chr5_1:48140441-48140460 None:intergenic 45.0%
! CTACAGATTTGGGGTTGTCA+AGG + chr5_1:48140448-48140467 Msa0734340:five_prime_UTR 45.0%
TCAGAACCTCAAGAGAAGTG+AGG - chr5_1:48140504-48140523 None:intergenic 45.0%
AACGATGCAAAGAGGGAACA+GGG + chr5_1:48140551-48140570 Msa0734340:five_prime_UTR 45.0%
!! TTCTTTGGAACCCATTACGC+AGG + chr5_1:48140748-48140767 Msa0734340:intron 45.0%
TGAATCTCTGCCTGCGTAAT+GGG - chr5_1:48140761-48140780 None:intergenic 45.0%
AGGATTGCCTTCAACACACA+AGG + chr5_1:48140937-48140956 Msa0734340:intron 45.0%
GGATTGCCTTCAACACACAA+GGG + chr5_1:48140938-48140957 Msa0734340:intron 45.0%
!! AGAACGAACGTCTTTTGGAG+TGG + chr5_1:48140993-48141012 Msa0734340:five_prime_UTR 45.0%
!!! AACGTCTTTTGGAGTGGAAG+AGG + chr5_1:48140999-48141018 Msa0734340:five_prime_UTR 45.0%
TCCTGATAGAGTTCTCTCCT+TGG + chr5_1:48141578-48141597 Msa0734340:CDS 45.0%
TCCAAGGAGAGAACTCTATC+AGG - chr5_1:48141582-48141601 None:intergenic 45.0%
GATGGTGATTGAGGCAGATA+AGG - chr5_1:48142300-48142319 None:intergenic 45.0%
TAGGATTGCTTTCGACACAC+AGG + chr5_1:48142588-48142607 Msa0734340:intron 45.0%
AGGATTGCTTTCGACACACA+GGG + chr5_1:48142589-48142608 Msa0734340:intron 45.0%
CGTTGCATTTAGCAAAGGCA+AGG - chr5_1:48143260-48143279 None:intergenic 45.0%
! TGAAGAGGTGTATACACACC+TGG - chr5_1:48144022-48144041 None:intergenic 45.0%
TGAAAACATGCAGGCGATGA+TGG + chr5_1:48144383-48144402 Msa0734340:intron 45.0%
TCAGAACCTTGAGAGAAGTG+AGG - chr5_1:48144615-48144634 None:intergenic 45.0%
AGTGATGCAAGGAGGAAACA+TGG + chr5_1:48144662-48144681 Msa0734340:intron 45.0%
GTGATGCAAGGAGGAAACAT+GGG + chr5_1:48144663-48144682 Msa0734340:intron 45.0%
! CGGAATTACGCAGTTGATGT+TGG + chr5_1:48144713-48144732 Msa0734340:intron 45.0%
GAAGTGAATATCCCGAAGCT+TGG - chr5_1:48145521-48145540 None:intergenic 45.0%
CATAAGGACATGCACATGCA+GGG - chr5_1:48145780-48145799 None:intergenic 45.0%
TCATAAGGACATGCACATGC+AGG - chr5_1:48145781-48145800 None:intergenic 45.0%
GGAGCTCAATCAACTAATGG+GGG - chr5_1:48145953-48145972 None:intergenic 45.0%
GTACTGCACAATTCTGCCTT+TGG + chr5_1:48145984-48146003 Msa0734340:intron 45.0%
GTGCAAAATCTACCTCCAGT+TGG + chr5_1:48146554-48146573 Msa0734340:intron 45.0%
TTGGAAGGACCAATTCCAAC+TGG - chr5_1:48146572-48146591 None:intergenic 45.0%
GTGGCACATAATCACTTGGA+AGG - chr5_1:48146587-48146606 None:intergenic 45.0%
! CAGTTTGGCCTGTTAGCTTA+CGG + chr5_1:48146921-48146940 Msa0734340:intron 45.0%
AACAGTTCATGGAACAGCAG+CGG + chr5_1:48147085-48147104 Msa0734340:intron 45.0%
GCTTGGTCAAAATTGACCTG+GGG + chr5_1:48147146-48147165 Msa0734340:intron 45.0%
CTGGGGTCAAAACTGCAAAA+GGG + chr5_1:48147163-48147182 Msa0734340:intron 45.0%
TGGGGTCAAAACTGCAAAAG+GGG + chr5_1:48147164-48147183 Msa0734340:intron 45.0%
AAAGGGGCAATACTTATGGG+TGG + chr5_1:48147180-48147199 Msa0734340:intron 45.0%
CGCAACTTCTTGAAACATGG+GGG + chr5_1:48147234-48147253 Msa0734340:intron 45.0%
GCAACTTCTTGAAACATGGG+GGG + chr5_1:48147235-48147254 Msa0734340:intron 45.0%
CATAGAATATGCAAGGTCCG+AGG + chr5_1:48147570-48147589 Msa0734340:intron 45.0%
GGAAATGGAAGTCTGATGAG+AGG - chr5_1:48148201-48148220 None:intergenic 45.0%
TGTACCACAAAAATGGAGCC+AGG + chr5_1:48148627-48148646 Msa0734340:intron 45.0%
!! TGTTCCTGGCTCCATTTTTG+TGG - chr5_1:48148634-48148653 None:intergenic 45.0%
AAAAATGGAGCCAGGAACAG+AGG + chr5_1:48148635-48148654 Msa0734340:intron 45.0%
CCTACACCCCAAAGAAAAAC+AGG - chr5_1:48148874-48148893 None:intergenic 45.0%
!!! CCTGTTTTTCTTTGGGGTGT+AGG + chr5_1:48148871-48148890 Msa0734340:intron 45.0%
GGAAGTAATTCTGTTGGGCT+AGG + chr5_1:48148892-48148911 Msa0734340:intron 45.0%
! TGTTGGGCTAGGTGCATAAT+GGG + chr5_1:48148903-48148922 Msa0734340:intron 45.0%
GACTAATGCAGGCTTATGCA+TGG + chr5_1:48148929-48148948 Msa0734340:intron 45.0%
! TAACCACACCCGATTTTAGG+AGG + chr5_1:48148977-48148996 Msa0734340:intron 45.0%
!! AACCACACCCGATTTTAGGA+GGG + chr5_1:48148978-48148997 Msa0734340:intron 45.0%
!! CCCGATTTTAGGAGGGATTT+TGG + chr5_1:48148985-48149004 Msa0734340:intron 45.0%
! GGATTTTGGATGTGCCACAT+TGG + chr5_1:48148999-48149018 Msa0734340:intron 45.0%
!! GGATGGATTCTTTTGTACGG+TGG + chr5_1:48149274-48149293 Msa0734340:intron 45.0%
GAGGCAATTATCAGTCTCGT+TGG - chr5_1:48149416-48149435 None:intergenic 45.0%
! TTTAGCGGGTGTGTTGGATT+AGG - chr5_1:48150117-48150136 None:intergenic 45.0%
!! TAGGATTTTAGCGGGTGTGT+TGG - chr5_1:48150123-48150142 None:intergenic 45.0%
AAATCTCATGCCAATGCCAC+TGG - chr5_1:48150408-48150427 None:intergenic 45.0%
! ATTCCAGTTCTGGTGTAAGG+TGG - chr5_1:48150455-48150474 None:intergenic 45.0%
TTATACATGCCAGTAGGGTC+TGG + chr5_1:48150614-48150633 Msa0734340:intron 45.0%
ATCGGGGTCCATTAAGAGAT+GGG - chr5_1:48150692-48150711 None:intergenic 45.0%
TATCGGGGTCCATTAAGAGA+TGG - chr5_1:48150693-48150712 None:intergenic 45.0%
AATGGTAGTAGCAAGCAAGG+AGG - chr5_1:48150801-48150820 None:intergenic 45.0%
TGCAATGGTAGTAGCAAGCA+AGG - chr5_1:48150804-48150823 None:intergenic 45.0%
!!! GAAAGGGATCGGCCATTTTT+AGG - chr5_1:48150916-48150935 None:intergenic 45.0%
AAAATGGCCGATCCCTTTCT+TGG + chr5_1:48150917-48150936 Msa0734340:intron 45.0%
ACTTGATCGAGCACTCATCA+AGG - chr5_1:48151147-48151166 None:intergenic 45.0%
ATCAAGTCTAGTCGACTGAG+AGG + chr5_1:48151160-48151179 Msa0734340:intron 45.0%
CTCAAGTTTCGCCATGAGAT+CGG + chr5_1:48151193-48151212 Msa0734340:intron 45.0%
!! AGGAGGGTACTAGAACTGTT+CGG + chr5_1:48151284-48151303 Msa0734340:intron 45.0%
GCCCAAATGAAGTAGCTGAA+TGG + chr5_1:48137995-48138014 Msa0734340:five_prime_UTR 45.0%
CGCCATTCAGCTACTTCATT+TGG - chr5_1:48138000-48138019 None:intergenic 45.0%
!!! GTTTTTGGGTTAGGTGGTCT+TGG + chr5_1:48138138-48138157 Msa0734340:five_prime_UTR 45.0%
GAGTTGTCGTGTGGATCAAA+AGG + chr5_1:48138453-48138472 Msa0734340:five_prime_UTR 45.0%
GAGGTTGTTGCAACAATCAC+AGG + chr5_1:48138504-48138523 Msa0734340:five_prime_UTR 45.0%
TGGGAAACTCACCGTTTATC+TGG + chr5_1:48138531-48138550 Msa0734340:five_prime_UTR 45.0%
CATCGGAGAGACCAGATAAA+CGG - chr5_1:48151861-48151880 None:intergenic 45.0%
TGGGAGGTTTAATGAGCTCA+AGG + chr5_1:48138691-48138710 Msa0734340:five_prime_UTR 45.0%
GAGCTCAAGGAATGAAGAAG+AGG + chr5_1:48138704-48138723 Msa0734340:five_prime_UTR 45.0%
! CCCGAAGAGAAAGGTATGTT+GGG - chr5_1:48139253-48139272 None:intergenic 45.0%
CCCAACATACCTTTCTCTTC+GGG + chr5_1:48139250-48139269 Msa0734340:five_prime_UTR 45.0%
! ACCCGAAGAGAAAGGTATGT+TGG - chr5_1:48139254-48139273 None:intergenic 45.0%
TGCGTAAAACCCGAAGAGAA+AGG - chr5_1:48139262-48139281 None:intergenic 45.0%
TAGTGATGGCATCCGGATAA+AGG - chr5_1:48152604-48152623 None:intergenic 45.0%
TTTATCCGGATGCCATCACT+AGG + chr5_1:48152603-48152622 Msa0734340:intron 45.0%
TTATCCGGATGCCATCACTA+GGG + chr5_1:48152604-48152623 Msa0734340:intron 45.0%
TAGTTGTCTCCCAAAACGCT+TGG + chr5_1:48152743-48152762 Msa0734340:intron 45.0%
! GTAAGCAAGCCAAGCGTTTT+GGG - chr5_1:48139439-48139458 None:intergenic 45.0%
! TGTAAGCAAGCCAAGCGTTT+TGG - chr5_1:48139440-48139459 None:intergenic 45.0%
TTACGTGATCTAAACCTCGG+TGG + chr5_1:48139593-48139612 Msa0734340:five_prime_UTR 45.0%
TGATATGCATCTTTCCACCG+AGG - chr5_1:48152926-48152945 None:intergenic 45.0%
AGCTCAAGCGGCTAATTTGA+AGG + chr5_1:48139661-48139680 Msa0734340:five_prime_UTR 45.0%
GCTCAAGCGGCTAATTTGAA+GGG + chr5_1:48139662-48139681 Msa0734340:five_prime_UTR 45.0%
TGAATCTCAGGATGGTATGG+AGG + chr5_1:48139979-48139998 Msa0734340:five_prime_UTR 45.0%
ATGGCAGCAGTCCAAGTTTA+GGG - chr5_1:48153442-48153461 None:intergenic 45.0%
! ACGAGGAGGTCTTTAAGAGA+TGG - chr5_1:48153470-48153489 None:intergenic 45.0%
CTCTTAAAGACCTCCTCGTA+CGG + chr5_1:48153471-48153490 Msa0734340:intron 45.0%
TCTTAAAGACCTCCTCGTAC+GGG + chr5_1:48153472-48153491 Msa0734340:intron 45.0%
CATTGTTACATTCCCGTACG+AGG - chr5_1:48153487-48153506 None:intergenic 45.0%
GTCTTACTCAGCTTACCCTA+AGG + chr5_1:48140218-48140237 Msa0734340:five_prime_UTR 45.0%
TACTCAGCTTACCCTAAGGA+AGG + chr5_1:48153541-48153560 Msa0734340:intron 45.0%
ACTCAGCTTACCCTAAGGAA+GGG + chr5_1:48153542-48153561 Msa0734340:intron 45.0%
AGGAATAACATCCTTCCCAG+AGG + chr5_1:48140249-48140268 Msa0734340:five_prime_UTR 45.0%
GGAATAACATCCTTCCCAGA+GGG + chr5_1:48140250-48140269 Msa0734340:five_prime_UTR 45.0%
GAATAACATCCTTCCCAGAG+GGG + chr5_1:48140251-48140270 Msa0734340:five_prime_UTR 45.0%
! GGTTTTTGAACATCCCCTCT+GGG - chr5_1:48140267-48140286 None:intergenic 45.0%
! AGGTTTTTGAACATCCCCTC+TGG - chr5_1:48140268-48140287 None:intergenic 45.0%
! AGACCTTCCCAATTTTGCTC+TGG - chr5_1:48153662-48153681 None:intergenic 45.0%
TAAAGGATTGCGATGCTTGC+CGG + chr5_1:48153715-48153734 Msa0734340:CDS 45.0%
TCAGAAGCTCAAGAGAAGTG+AGG - chr5_1:48153754-48153773 None:intergenic 45.0%
TCAAAGATTGCGATGCTTGC+CGG + chr5_1:48153787-48153806 Msa0734340:intron 45.0%
AACGATGCAAAGAGGGAACA+GGG + chr5_1:48140551-48140570 Msa0734340:five_prime_UTR 45.0%
GATGGTGATTGAGGCAGATA+AGG - chr5_1:48142300-48142319 None:intergenic 45.0%
! GTCTAAAACACACAAGGGTC+AGG + chr5_1:48154271-48154290 Msa0734340:intron 45.0%
!!! AACGTCTTTTGGAGTAGAGG+AGG + chr5_1:48154343-48154362 Msa0734340:CDS 45.0%
!! ATAAAATAAAATAAAATAAG+AGG - chr5_1:48149567-48149586 None:intergenic 5.0%
!! ATTAAAAATTATTAATATCA+TGG + chr5_1:48150038-48150057 Msa0734340:intron 5.0%
AAAATGGCCGACGCTTTGCT+CGG + chr5_1:48137571-48137590 Msa0734340:five_prime_UTR 50.0%
TTCGCCATGAGATCGGTAAC+AGG + chr5_1:48137884-48137903 Msa0734340:five_prime_UTR 50.0%
!! AGGAGGGTACTGGAACTGTT+CGG + chr5_1:48137968-48137987 Msa0734340:five_prime_UTR 50.0%
GTTTCTTGTCACCCAAGCGA+AGG + chr5_1:48138089-48138108 Msa0734340:five_prime_UTR 50.0%
TGCAACAACCTCATCACGAG+TGG - chr5_1:48138496-48138515 None:intergenic 50.0%
!! CCTCTTGCAGCGAAAGCATT+GGG + chr5_1:48138672-48138691 Msa0734340:five_prime_UTR 50.0%
GAGTTGTCTCCCAAAACGCT+TGG + chr5_1:48139427-48139446 Msa0734340:five_prime_UTR 50.0%
! CAATACGCAGTTTTCCACCG+AGG - chr5_1:48139610-48139629 None:intergenic 50.0%
GCCCCAACTATTACTAGTGC+TGG + chr5_1:48139731-48139750 Msa0734340:five_prime_UTR 50.0%
ATTGTGCGGCTTCCGTTACT+TGG + chr5_1:48139890-48139909 Msa0734340:five_prime_UTR 50.0%
TCAGGATGGTATGGAGGTGA+GGG + chr5_1:48139985-48140004 Msa0734340:five_prime_UTR 50.0%
AGGTCAATCTCTACCTTCCG+TGG + chr5_1:48140196-48140215 Msa0734340:five_prime_UTR 50.0%
AAGCTGAGTAAGACCACGGA+AGG - chr5_1:48140212-48140231 None:intergenic 50.0%
GGGTAAGCTGAGTAAGACCA+CGG - chr5_1:48140216-48140235 None:intergenic 50.0%
! TTTGAACATCCCCTCTGGGA+AGG - chr5_1:48140263-48140282 None:intergenic 50.0%
GGGAAGGTCTTCAATCCCTT+AGG + chr5_1:48140422-48140441 Msa0734340:five_prime_UTR 50.0%
TCAAGGATTGCGATGCTTGC+CGG + chr5_1:48140465-48140484 Msa0734340:five_prime_UTR 50.0%
TCGACACCTCACTTCTCTTG+AGG + chr5_1:48140495-48140514 Msa0734340:five_prime_UTR 50.0%
GAACGATGCAAAGAGGGAAC+AGG + chr5_1:48140550-48140569 Msa0734340:five_prime_UTR 50.0%
ACGATGCAAAGAGGGAACAG+GGG + chr5_1:48140552-48140571 Msa0734340:five_prime_UTR 50.0%
CTGAATCTCTGCCTGCGTAA+TGG - chr5_1:48140762-48140781 None:intergenic 50.0%
AGAGGTGACAACAAGTCCGT+TGG + chr5_1:48141017-48141036 Msa0734340:five_prime_UTR 50.0%
!! ATCAGACTTGCTACTGGGCA+CGG - chr5_1:48141090-48141109 None:intergenic 50.0%
GGATTGCTTTCGACACACAG+GGG + chr5_1:48142590-48142609 Msa0734340:intron 50.0%
!! GAAGAGAACGTCTTTTCGGG+TGG + chr5_1:48142661-48142680 Msa0734340:CDS 50.0%
!!! AACGTCTTTTCGGGTGGAGA+AGG + chr5_1:48142667-48142686 Msa0734340:CDS 50.0%
GGAGAAGGTGACAATGAGTC+TGG + chr5_1:48142682-48142701 Msa0734340:CDS 50.0%
GAAGGTGACAATGAGTCTGG+TGG + chr5_1:48142685-48142704 Msa0734340:CDS 50.0%
! TTGATAATCAGGGCGTGGGT+AGG + chr5_1:48142717-48142736 Msa0734340:intron 50.0%
GGCAAGGAGAGAACTCTATC+AGG - chr5_1:48143244-48143263 None:intergenic 50.0%
CGACCCGTTGCATTTAGCAA+AGG - chr5_1:48143265-48143284 None:intergenic 50.0%
TTGCTAAATGCAACGGGTCG+AGG + chr5_1:48143265-48143284 Msa0734340:CDS 50.0%
TAGGAACTGAAGAATGGCCC+AGG - chr5_1:48144314-48144333 None:intergenic 50.0%
ACCACACCTCACTTCTCTCA+AGG + chr5_1:48144606-48144625 Msa0734340:intron 50.0%
ACCTTGAGAGAAGTGAGGTG+TGG - chr5_1:48144610-48144629 None:intergenic 50.0%
ATGCAAGGAGGAAACATGGG+AGG + chr5_1:48144666-48144685 Msa0734340:intron 50.0%
CCAAAGTCAAGAGACGTGAG+AGG - chr5_1:48144831-48144850 None:intergenic 50.0%
CCTCTCACGTCTCTTGACTT+TGG + chr5_1:48144828-48144847 Msa0734340:CDS 50.0%
GAAGGACCAATTCCAACTGG+AGG - chr5_1:48146569-48146588 None:intergenic 50.0%
! TTTGGCCTGTTAGCTTACGG+TGG + chr5_1:48146924-48146943 Msa0734340:intron 50.0%
GCTTTCCACCGTAAGCTAAC+AGG - chr5_1:48146932-48146951 None:intergenic 50.0%
! TTCATGAGCCTCGACTGGTT+CGG - chr5_1:48147067-48147086 None:intergenic 50.0%
AACTGTTCATGAGCCTCGAC+TGG - chr5_1:48147072-48147091 None:intergenic 50.0%
CGAGGCTCATGAACAGTTCA+TGG + chr5_1:48147074-48147093 Msa0734340:intron 50.0%
! CGCGACGATGATGTTTTGCT+TGG + chr5_1:48147129-48147148 Msa0734340:intron 50.0%
!! CCTTTTGCAGTTTTGACCCC+AGG - chr5_1:48147165-48147184 None:intergenic 50.0%
CCTGGGGTCAAAACTGCAAA+AGG + chr5_1:48147162-48147181 Msa0734340:intron 50.0%
TCAACTGAGTTAAGCGCACC+AGG - chr5_1:48147539-48147558 None:intergenic 50.0%
GGTGGTCGAGATTTGAACCT+CGG - chr5_1:48147590-48147609 None:intergenic 50.0%
GGTAGCAGTGCTTTAGTGCA+AGG - chr5_1:48148043-48148062 None:intergenic 50.0%
CTCAACAAGCACACCGCTTA+AGG + chr5_1:48148093-48148112 Msa0734340:intron 50.0%
! AGAGCATCACACGCGTTAGT+AGG - chr5_1:48148827-48148846 None:intergenic 50.0%
! CTGTTGGGCTAGGTGCATAA+TGG + chr5_1:48148902-48148921 Msa0734340:intron 50.0%
ATCCCTCCTAAAATCGGGTG+TGG - chr5_1:48148983-48149002 None:intergenic 50.0%
TGACCACCTTACACCAGAAC+TGG + chr5_1:48150449-48150468 Msa0734340:intron 50.0%
TCGGGGTCCATTAAGAGATG+GGG - chr5_1:48150691-48150710 None:intergenic 50.0%
CTCATGGCGAAACTTGAGAG+AGG - chr5_1:48151191-48151210 None:intergenic 50.0%
TTCGCCATGAGATCGGTAAC+AGG + chr5_1:48137884-48137903 Msa0734340:five_prime_UTR 50.0%
CCAACCTGTTACCGATCTCA+TGG - chr5_1:48151207-48151226 None:intergenic 50.0%
CCATGAGATCGGTAACAGGT+TGG + chr5_1:48137888-48137907 Msa0734340:five_prime_UTR 50.0%
GGTTGGAAGAGATTACAGGG+AGG + chr5_1:48151221-48151240 Msa0734340:intron 50.0%
GGAAGAGATTACAGGGAGGT+TGG + chr5_1:48151225-48151244 Msa0734340:intron 50.0%
!! GGAGGGTACTAGAACTGTTC+GGG + chr5_1:48151285-48151304 Msa0734340:intron 50.0%
GTTTCTTCTCACCCAAGCGA+AGG + chr5_1:48151405-48151424 Msa0734340:intron 50.0%
TGCAACAACCTCATCACGAG+TGG - chr5_1:48138496-48138515 None:intergenic 50.0%
GTCTCTCCGATGATGAATGC+TGG + chr5_1:48151869-48151888 Msa0734340:intron 50.0%
!! CCTCTTGCAGCGAAAGCATT+GGG + chr5_1:48138672-48138691 Msa0734340:five_prime_UTR 50.0%
TATCCGGATGCCATCACTAG+GGG + chr5_1:48152605-48152624 Msa0734340:intron 50.0%
ATTGTGCGGCTTCCGTTACT+TGG + chr5_1:48139890-48139909 Msa0734340:five_prime_UTR 50.0%
TCAGGATGGTATGGAGGTGA+GGG + chr5_1:48139985-48140004 Msa0734340:five_prime_UTR 50.0%
CATGGCAGCAGTCCAAGTTT+AGG - chr5_1:48153443-48153462 None:intergenic 50.0%
TGTTACATTCCCGTACGAGG+AGG - chr5_1:48153484-48153503 None:intergenic 50.0%
AGGTCAATCTCTACCTTCCG+TGG + chr5_1:48140196-48140215 Msa0734340:five_prime_UTR 50.0%
AAGCTGAGTAAGACCACGGA+AGG - chr5_1:48140212-48140231 None:intergenic 50.0%
GGGTAAGCTGAGTAAGACCA+CGG - chr5_1:48140216-48140235 None:intergenic 50.0%
CTTACCCTAAGGAAGGGTGA+AGG + chr5_1:48153548-48153567 Msa0734340:intron 50.0%
! TTTGAACATCCCCTCTGGGA+AGG - chr5_1:48140263-48140282 None:intergenic 50.0%
!! GTGAGGTGTCGAATACCATC+CGG - chr5_1:48153809-48153828 None:intergenic 50.0%
GAACGATGCAAAGAGGGAAC+AGG + chr5_1:48140550-48140569 Msa0734340:five_prime_UTR 50.0%
ACGATGCAAAGAGGGAACAG+GGG + chr5_1:48140552-48140571 Msa0734340:five_prime_UTR 50.0%
!! TTCTTTGGAACCCATTCCGC+AGG + chr5_1:48154085-48154104 Msa0734340:intron 50.0%
TGGATCTCTTCCTGCGGAAT+GGG - chr5_1:48154098-48154117 None:intergenic 50.0%
GTACTCTGGATCTCTTCCTG+CGG - chr5_1:48154104-48154123 None:intergenic 50.0%
CACAACTCCGAGCAAAGCGT+CGG - chr5_1:48137581-48137600 None:intergenic 55.0%
!! GGAGGGTACTGGAACTGTTC+GGG + chr5_1:48137969-48137988 Msa0734340:five_prime_UTR 55.0%
GAAGTCGGAGTCCTTCGCTT+GGG - chr5_1:48138103-48138122 None:intergenic 55.0%
! GCCTCTTGCAGCGAAAGCAT+TGG + chr5_1:48138671-48138690 Msa0734340:five_prime_UTR 55.0%
CCCAATGCTTTCGCTGCAAG+AGG - chr5_1:48138675-48138694 None:intergenic 55.0%
!! CTTGCAGCGAAAGCATTGGG+AGG + chr5_1:48138675-48138694 Msa0734340:five_prime_UTR 55.0%
CTCAGGATGGTATGGAGGTG+AGG + chr5_1:48139984-48140003 Msa0734340:five_prime_UTR 55.0%
! GGTGAGGGTTTTCCCATCTC+TGG + chr5_1:48140000-48140019 Msa0734340:five_prime_UTR 55.0%
! GAGGGTTTTCCCATCTCTGG+AGG + chr5_1:48140003-48140022 Msa0734340:five_prime_UTR 55.0%
! ACCCAGCTTTGACGGATCTG+CGG + chr5_1:48140356-48140375 Msa0734340:five_prime_UTR 55.0%
TCCGCAGATCCGTCAAAGCT+GGG - chr5_1:48140360-48140379 None:intergenic 55.0%
ATCCGCAGATCCGTCAAAGC+TGG - chr5_1:48140361-48140380 None:intergenic 55.0%
!! GTGAGGTGTCGAATACCCTC+CGG - chr5_1:48140487-48140506 None:intergenic 55.0%
ATGCAAAGAGGGAACAGGGG+AGG + chr5_1:48140555-48140574 Msa0734340:five_prime_UTR 55.0%
AAGAGGGAACAGGGGAGGAT+TGG + chr5_1:48140560-48140579 Msa0734340:five_prime_UTR 55.0%
AGAGGGAACAGGGGAGGATT+GGG + chr5_1:48140561-48140580 Msa0734340:five_prime_UTR 55.0%
GGTGACAACAAGTCCGTTGG+CGG + chr5_1:48141020-48141039 Msa0734340:five_prime_UTR 55.0%
GCAATCCTCGATACCGCCAA+CGG - chr5_1:48141036-48141055 None:intergenic 55.0%
TACCATCGACAGAACAGGGG+AGG + chr5_1:48142218-48142237 Msa0734340:intron 55.0%
ATCCTCCCCTGTTCTGTCGA+TGG - chr5_1:48142223-48142242 None:intergenic 55.0%
TCGACAGAACAGGGGAGGAT+TGG + chr5_1:48142223-48142242 Msa0734340:intron 55.0%
CGACAGAACAGGGGAGGATT+GGG + chr5_1:48142224-48142243 Msa0734340:intron 55.0%
TTGCTTTCGACACACAGGGG+TGG + chr5_1:48142593-48142612 Msa0734340:intron 55.0%
TGCTTTCGACACACAGGGGT+GGG + chr5_1:48142594-48142613 Msa0734340:intron 55.0%
GGAGGAAACATGGGAGGATC+TGG + chr5_1:48144672-48144691 Msa0734340:intron 55.0%
! AGTTGGTTCCGAACCAGTCG+AGG + chr5_1:48147056-48147075 Msa0734340:intron 55.0%
!! GGGCTAGGTGCATAATGGGT+TGG + chr5_1:48148907-48148926 Msa0734340:intron 55.0%
GAAGTCGGAGTCCTTCGCTT+GGG - chr5_1:48138103-48138122 None:intergenic 55.0%
! GCCTCTTGCAGCGAAAGCAT+TGG + chr5_1:48138671-48138690 Msa0734340:five_prime_UTR 55.0%
CCCAATGCTTTCGCTGCAAG+AGG - chr5_1:48138675-48138694 None:intergenic 55.0%
!! CTTGCAGCGAAAGCATTGGG+AGG + chr5_1:48138675-48138694 Msa0734340:five_prime_UTR 55.0%
ATCCGGATGCCATCACTAGG+GGG + chr5_1:48152606-48152625 Msa0734340:intron 55.0%
AACCCCCTAGTGATGGCATC+CGG - chr5_1:48152611-48152630 None:intergenic 55.0%
CTCAGGATGGTATGGAGGTG+AGG + chr5_1:48139984-48140003 Msa0734340:five_prime_UTR 55.0%
! GGTGAGGGTTTTCCCATCTC+TGG + chr5_1:48140000-48140019 Msa0734340:five_prime_UTR 55.0%
! GAGGGTTTTCCCATCTCTGG+AGG + chr5_1:48140003-48140022 Msa0734340:five_prime_UTR 55.0%
!! GTGAGGTGTCGAATACCCTC+CGG - chr5_1:48140487-48140506 None:intergenic 55.0%
AGATTGCGATGCTTGCCGGA+TGG + chr5_1:48153791-48153810 Msa0734340:intron 55.0%
ATGCAAAGAGGGAACAGGGG+AGG + chr5_1:48140555-48140574 Msa0734340:five_prime_UTR 55.0%
AAGAGGGAACAGGGGAGGAT+TGG + chr5_1:48140560-48140579 Msa0734340:five_prime_UTR 55.0%
AGAGGGAACAGGGGAGGATT+GGG + chr5_1:48140561-48140580 Msa0734340:five_prime_UTR 55.0%
CTGGATCTCTTCCTGCGGAA+TGG - chr5_1:48154099-48154118 None:intergenic 55.0%
GGGTCAGGTCGACAAATGAC+AGG + chr5_1:48154286-48154305 Msa0734340:intron 55.0%
AGAGGAGGTGACAGTGAGTG+CGG + chr5_1:48154358-48154377 Msa0734340:CDS 55.0%
GGAAGTCGGAGTCCTTCGCT+TGG - chr5_1:48138104-48138123 None:intergenic 60.0%
AGGATTGCGATGCTTGCCGG+AGG + chr5_1:48140468-48140487 Msa0734340:five_prime_UTR 60.0%
GGATTGCGATGCTTGCCGGA+GGG + chr5_1:48140469-48140488 Msa0734340:five_prime_UTR 60.0%
CAAGTCCGTTGGCGGTATCG+AGG + chr5_1:48141028-48141047 Msa0734340:five_prime_UTR 60.0%
GCTTTCGACACACAGGGGTG+GGG + chr5_1:48142595-48142614 Msa0734340:intron 60.0%
GGGTGGGGTCGGCAGATAAA+TGG + chr5_1:48142610-48142629 Msa0734340:CDS 60.0%
! GTGTGGTGTCGAGTACCCTC+AGG - chr5_1:48144593-48144612 None:intergenic 60.0%
GGCAGGGTTTCCTCTGTTCC+TGG - chr5_1:48148648-48148667 None:intergenic 60.0%
GGAAGTCGGAGTCCTTCGCT+TGG - chr5_1:48138104-48138123 None:intergenic 60.0%
AGGATTGCGATGCTTGCCGG+AGG + chr5_1:48140468-48140487 Msa0734340:five_prime_UTR 60.0%
GGATTGCGATGCTTGCCGGA+GGG + chr5_1:48140469-48140488 Msa0734340:five_prime_UTR 60.0%
TCGACACACAGGGGTGGGGT+CGG + chr5_1:48142599-48142618 Msa0734340:intron 65.0%
GGAGGTGACAGTGAGTGCGG+TGG + chr5_1:48154361-48154380 Msa0734340:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 48137444 48154390 48137444 ID=Msa0734340;Name=Msa0734340
chr5_1 mRNA 48137444 48154390 48137444 ID=Msa0734340-mRNA-1;Parent=Msa0734340;Name=Msa0734340-mRNA-1;_AED=0.32;_eAED=0.35;_QI=3667|0.42|0.46|1|0.28|0.2|15|0|270
chr5_1 exon 48137444 48137836 48137444 ID=Msa0734340-mRNA-1:exon:13776;Parent=Msa0734340-mRNA-1
chr5_1 exon 48137867 48140683 48137867 ID=Msa0734340-mRNA-1:exon:13777;Parent=Msa0734340-mRNA-1
chr5_1 exon 48140770 48140837 48140770 ID=Msa0734340-mRNA-1:exon:13778;Parent=Msa0734340-mRNA-1
chr5_1 exon 48140939 48141400 48140939 ID=Msa0734340-mRNA-1:exon:13779;Parent=Msa0734340-mRNA-1
chr5_1 exon 48141544 48141644 48141544 ID=Msa0734340-mRNA-1:exon:13780;Parent=Msa0734340-mRNA-1
chr5_1 exon 48142437 48142499 48142437 ID=Msa0734340-mRNA-1:exon:13781;Parent=Msa0734340-mRNA-1
chr5_1 exon 48142610 48142706 48142610 ID=Msa0734340-mRNA-1:exon:13782;Parent=Msa0734340-mRNA-1
chr5_1 exon 48143031 48143066 48143031 ID=Msa0734340-mRNA-1:exon:13783;Parent=Msa0734340-mRNA-1
chr5_1 exon 48143206 48143306 48143206 ID=Msa0734340-mRNA-1:exon:13784;Parent=Msa0734340-mRNA-1
chr5_1 exon 48143830 48143862 48143830 ID=Msa0734340-mRNA-1:exon:13785;Parent=Msa0734340-mRNA-1
chr5_1 exon 48144396 48144404 48144396 ID=Msa0734340-mRNA-1:exon:13786;Parent=Msa0734340-mRNA-1
chr5_1 exon 48144822 48144862 48144822 ID=Msa0734340-mRNA-1:exon:13787;Parent=Msa0734340-mRNA-1
chr5_1 exon 48145843 48145906 48145843 ID=Msa0734340-mRNA-1:exon:13788;Parent=Msa0734340-mRNA-1
chr5_1 exon 48153647 48153740 48153647 ID=Msa0734340-mRNA-1:exon:13789;Parent=Msa0734340-mRNA-1
chr5_1 exon 48154293 48154390 48154293 ID=Msa0734340-mRNA-1:exon:13790;Parent=Msa0734340-mRNA-1
chr5_1 five_prime_UTR 48137444 48137836 48137444 ID=Msa0734340-mRNA-1:five_prime_utr;Parent=Msa0734340-mRNA-1
chr5_1 five_prime_UTR 48137867 48140683 48137867 ID=Msa0734340-mRNA-1:five_prime_utr;Parent=Msa0734340-mRNA-1
chr5_1 five_prime_UTR 48140770 48140837 48140770 ID=Msa0734340-mRNA-1:five_prime_utr;Parent=Msa0734340-mRNA-1
chr5_1 five_prime_UTR 48140939 48141327 48140939 ID=Msa0734340-mRNA-1:five_prime_utr;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48141328 48141400 48141328 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48141544 48141644 48141544 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48142437 48142499 48142437 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48142610 48142706 48142610 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48143031 48143066 48143031 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48143206 48143306 48143206 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48143830 48143862 48143830 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48144396 48144404 48144396 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48144822 48144862 48144822 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48145843 48145906 48145843 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48153647 48153740 48153647 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
chr5_1 CDS 48154293 48154390 48154293 ID=Msa0734340-mRNA-1:cds;Parent=Msa0734340-mRNA-1
Gene Sequence

>Msa0734340

ATGCCAAAGGATGCAATTACTTTGTTGGATCATTTAGGTTGCAAAAAGGCTCATGTTTTTGTGCACTACATTGGATCCATGATAGCTTGTAAAATAGCAGCAATGGTTCCTGATAGAGTTCTCTCCTTGGATTTGCTATATGCAACAGGTGGATGTTTTCAATGTTTTCCAGAGGCTTTTCTGTTGCATTCTTTTGAACGCATCCCCCAAAAGATGTTTTATAATATTCTAATTCAGGGGTGGGGTCGGCAGATAAATGGATTAACTGGAACAAACGTACCTAATGATGAAGAGAACGTCTTTTCGGGTGGAGAAGGTGACAATGAGTCTGGTGGTTCGAAAAAGGCTCATGTTTTTGGGCACTCAATGGGATCTATGATAGCTTGTAAAATAGCAGAAACGGTTCCTGATAGAGTTCTCTCCTTGCCTTTGCTAAATGCAACGGGTCGAGGTTTTCAATGTTTTTCAGAGGAATCACTTGCTTTCTCAGTTTCTGTGTTTAATGCGATGATGGATATGCCTCTCACGTCTCTTGACTTTGGTCTCCTTGTTATGAATCACTTTCTTATTACACTGTTGTTGGAACATATATTGAGTGAGGAAAACAAAGACATAAATTTGGAGTCCTTACCAGAGCAAAATTGGGAAGGTCTTCAATCCCTTCGATATCTATGTCTTCGTGAGTGTAAAGGATTGCGATGCTTGCCGGAGGGTCGACAAATGACAGGATTAACCGGAACAAACGTACCTAATGATGAAGAAAACGTCTTTTGGAGTAGAGGAGGTGACAGTGAGTGCGGTGGTGATATC
Protein sequence

>Msa0734340

MPKDAITLLDHLGCKKAHVFVHYIGSMIACKIAAMVPDRVLSLDLLYATGGCFQCFPEAFLLHSFERIPQKMFYNILIQGWGRQINGLTGTNVPNDEENVFSGGEGDNESGGSKKAHVFGHSMGSMIACKIAETVPDRVLSLPLLNATGRGFQCFSEESLAFSVSVFNAMMDMPLTSLDFGLLVMNHFLITLLLEHILSEENKDINLESLPEQNWEGLQSLRYLCLRECKGLRCLPEGRQMTGLTGTNVPNDEENVFWSRGGDSECGGDI