Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523080 | XP_003603769.1 | 96.053 | 608 | 24 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523080 | sp|Q9SA91|PSI2_ARATH | 47.833 | 623 | 295 | 9 | 1 | 606 | 1 | 610 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523080 | G7J592 | 96.053 | 608 | 24 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1206 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026420 | Msa0523080 | 0.805745 | 1.150917e-49 | -8.615850e-47 |
| Msa0030800 | Msa0523080 | 0.818417 | 1.982213e-52 | -8.615850e-47 |
| Msa0035790 | Msa0523080 | 0.822760 | 1.993212e-53 | -8.615850e-47 |
| Msa0051480 | Msa0523080 | 0.878680 | 2.307943e-69 | -8.615850e-47 |
| Msa0051620 | Msa0523080 | 0.801833 | 7.470695e-49 | -8.615850e-47 |
| Msa0051730 | Msa0523080 | 0.803541 | 3.318596e-49 | -8.615850e-47 |
| Msa0078210 | Msa0523080 | 0.810209 | 1.291755e-50 | -8.615850e-47 |
| Msa0083890 | Msa0523080 | 0.837301 | 5.635740e-57 | -8.615850e-47 |
| Msa0143640 | Msa0523080 | 0.824735 | 6.872541e-54 | -8.615850e-47 |
| Msa0146200 | Msa0523080 | 0.881328 | 2.630572e-70 | -8.615850e-47 |
| Msa0162680 | Msa0523080 | 0.823728 | 1.184949e-53 | -8.615850e-47 |
| Msa0204170 | Msa0523080 | 0.821632 | 3.642630e-53 | -8.615850e-47 |
| Msa0385320 | Msa0523080 | 0.889722 | 1.877825e-73 | -8.615850e-47 |
| Msa0393100 | Msa0523080 | 0.804115 | 2.521545e-49 | -8.615850e-47 |
| Msa0402800 | Msa0523080 | 0.805639 | 1.211660e-49 | -8.615850e-47 |
| Msa0438070 | Msa0523080 | 0.879116 | 1.619938e-69 | -8.615850e-47 |
| Msa0480550 | Msa0523080 | 0.810299 | 1.235383e-50 | -8.615850e-47 |
| Msa0481740 | Msa0523080 | 0.811501 | 6.784229e-51 | -8.615850e-47 |
| Msa0481770 | Msa0523080 | 0.896561 | 3.278586e-76 | -8.615850e-47 |
| Msa0267900 | Msa0523080 | 0.825380 | 4.837851e-54 | -8.615850e-47 |
| Msa0324840 | Msa0523080 | 0.818798 | 1.623954e-52 | -8.615850e-47 |
| Msa0500770 | Msa0523080 | 0.807831 | 4.171759e-50 | -8.615850e-47 |
| Msa0523080 | Msa0568110 | 0.823422 | 1.396896e-53 | -8.615850e-47 |
| Msa0523080 | Msa0570460 | 0.828244 | 1.001354e-54 | -8.615850e-47 |
| Msa0523080 | Msa0580840 | 0.819907 | 9.074648e-53 | -8.615850e-47 |
| Msa0523080 | Msa0668750 | 0.812546 | 4.016046e-51 | -8.615850e-47 |
| Msa0523080 | Msa0740630 | 0.826687 | 2.366301e-54 | -8.615850e-47 |
| Msa0523080 | Msa0744560 | 0.802588 | 5.224603e-49 | -8.615850e-47 |
| Msa0523080 | Msa0746340 | 0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0523080 | Msa0795320 | 0.809681 | 1.678162e-50 | -8.615850e-47 |
| Msa0523080 | Msa0820880 | 0.827596 | 1.433273e-54 | -8.615850e-47 |
| Msa0523080 | Msa0859040 | 0.821475 | 3.959413e-53 | -8.615850e-47 |
| Msa0523080 | Msa0865830 | 0.800358 | 1.495992e-48 | -8.615850e-47 |
| Msa0523080 | Msa1027910 | 0.804527 | 2.069518e-49 | -8.615850e-47 |
| Msa0523080 | Msa1030210 | 0.807751 | 4.338488e-50 | -8.615850e-47 |
| Msa0523080 | Msa1064240 | 0.803255 | 3.803558e-49 | -8.615850e-47 |
| Msa0523080 | Msa1067800 | 0.800149 | 1.650571e-48 | -8.615850e-47 |
| Msa0523080 | Msa1080650 | 0.812971 | 3.241542e-51 | -8.615850e-47 |
| Msa0523080 | Msa1126440 | 0.808103 | 3.650820e-50 | -8.615850e-47 |
| Msa0523080 | Msa1154240 | 0.800045 | 1.732722e-48 | -8.615850e-47 |
| Msa0523080 | Msa1211610 | 0.816029 | 6.827512e-52 | -8.615850e-47 |
| Msa0523080 | Msa1223560 | 0.811427 | 7.040678e-51 | -8.615850e-47 |
| Msa0523080 | Msa1224510 | 0.812567 | 3.973782e-51 | -8.615850e-47 |
| Msa0523080 | Msa1262540 | 0.804830 | 1.788968e-49 | -8.615850e-47 |
| Msa0523080 | Msa1263500 | 0.803776 | 2.966736e-49 | -8.615850e-47 |
| Msa0523080 | Msa1299480 | 0.820384 | 7.057957e-53 | -8.615850e-47 |
| Msa0523080 | Msa1300930 | 0.809314 | 2.011261e-50 | -8.615850e-47 |
| Msa0523080 | Msa1333700 | 0.812304 | 4.534159e-51 | -8.615850e-47 |
| Msa0523080 | Msa1346010 | 0.869200 | 3.699015e-66 | -8.615850e-47 |
| Msa0523080 | Msa1358650 | 0.801289 | 9.661304e-49 | -8.615850e-47 |
| Msa0523080 | Msa1377050 | 0.876862 | 9.964625e-69 | -8.615850e-47 |
| Msa0523080 | Msa1383790 | 0.892140 | 2.088097e-74 | -8.615850e-47 |
| Msa0523080 | Msa1387610 | 0.828066 | 1.105108e-54 | -8.615850e-47 |
| Msa0523080 | Msa1396160 | 0.819905 | 9.084419e-53 | -8.615850e-47 |
| Msa0523080 | Msa1438160 | 0.835478 | 1.638996e-56 | -8.615850e-47 |
| Msa0523080 | Msa1449470 | 0.814187 | 1.750100e-51 | -8.615850e-47 |
| Msa0523080 | Msa1453600 | 0.899296 | 2.279898e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523080 | MtrunA17_Chr3g0142751 | 96.053 | 608 | 24 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1206 |
| Msa0523080 | MtrunA17_Chr1g0156671 | 58.604 | 616 | 223 | 9 | 1 | 606 | 1 | 594 | 0.0 | 686 |
| Msa0523080 | MtrunA17_Chr1g0200831 | 51.845 | 515 | 229 | 6 | 76 | 584 | 112 | 613 | 1.76e-171 | 502 |
| Msa0523080 | MtrunA17_Chr8g0385111 | 43.609 | 532 | 268 | 7 | 39 | 560 | 69 | 578 | 4.81e-129 | 393 |
| Msa0523080 | MtrunA17_Chr3g0130981 | 49.377 | 401 | 194 | 5 | 76 | 473 | 94 | 488 | 6.30e-123 | 377 |
| Msa0523080 | MtrunA17_Chr1g0188181 | 24.194 | 434 | 248 | 7 | 120 | 483 | 154 | 576 | 6.43e-28 | 118 |
| Msa0523080 | MtrunA17_Chr1g0168081 | 32.057 | 209 | 132 | 3 | 122 | 327 | 43 | 244 | 8.93e-19 | 90.1 |
| Msa0523080 | MtrunA17_Chr1g0168081 | 31.646 | 158 | 93 | 3 | 340 | 493 | 437 | 583 | 1.27e-14 | 77.0 |
| Msa0523080 | MtrunA17_Chr1g0179471 | 34.014 | 147 | 83 | 3 | 340 | 484 | 384 | 518 | 1.76e-16 | 82.8 |
| Msa0523080 | MtrunA17_Chr1g0179471 | 26.887 | 212 | 146 | 3 | 121 | 328 | 28 | 234 | 7.77e-11 | 65.1 |
| Msa0523080 | MtrunA17_Chr1g0186481 | 30.189 | 212 | 135 | 4 | 122 | 328 | 46 | 249 | 2.29e-16 | 82.4 |
| Msa0523080 | MtrunA17_Chr1g0186481 | 33.526 | 173 | 98 | 5 | 325 | 493 | 394 | 553 | 2.48e-15 | 79.3 |
| Msa0523080 | MtrunA17_Chr6g0475791 | 36.364 | 165 | 87 | 6 | 326 | 483 | 301 | 454 | 1.54e-15 | 79.7 |
| Msa0523080 | MtrunA17_Chr6g0475791 | 25.446 | 224 | 153 | 4 | 120 | 336 | 34 | 250 | 1.22e-12 | 70.5 |
| Msa0523080 | MtrunA17_Chr1g0198031 | 32.237 | 152 | 89 | 3 | 341 | 488 | 433 | 574 | 4.82e-14 | 75.1 |
| Msa0523080 | MtrunA17_Chr1g0198031 | 25.701 | 214 | 151 | 3 | 117 | 327 | 21 | 229 | 1.06e-13 | 74.3 |
| Msa0523080 | MtrunA17_Chr7g0265631 | 27.442 | 215 | 141 | 5 | 122 | 329 | 29 | 235 | 3.01e-13 | 72.8 |
| Msa0523080 | MtrunA17_Chr7g0265631 | 31.544 | 149 | 86 | 2 | 343 | 485 | 396 | 534 | 1.37e-12 | 70.5 |
| Msa0523080 | MtrunA17_Chr3g0126591 | 32.237 | 152 | 86 | 3 | 340 | 484 | 423 | 564 | 8.32e-13 | 71.2 |
| Msa0523080 | MtrunA17_Chr4g0009451 | 24.766 | 214 | 155 | 2 | 122 | 329 | 19 | 232 | 5.25e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523080 | AT1G30755.5 | 47.833 | 623 | 295 | 9 | 1 | 606 | 1 | 610 | 0.0 | 530 |
| Msa0523080 | AT1G30755.1 | 47.833 | 623 | 295 | 9 | 1 | 606 | 1 | 610 | 0.0 | 530 |
| Msa0523080 | AT1G30755.6 | 47.833 | 623 | 295 | 9 | 1 | 606 | 1 | 610 | 0.0 | 530 |
| Msa0523080 | AT1G34320.1 | 49.615 | 520 | 235 | 9 | 76 | 581 | 105 | 611 | 1.37e-160 | 475 |
| Msa0523080 | AT1G34320.2 | 49.615 | 520 | 235 | 9 | 76 | 581 | 105 | 611 | 1.37e-160 | 475 |
| Msa0523080 | AT1G30755.3 | 52.539 | 453 | 203 | 4 | 1 | 441 | 1 | 453 | 8.36e-155 | 453 |
| Msa0523080 | AT1G30755.4 | 51.253 | 439 | 202 | 4 | 1 | 427 | 1 | 439 | 3.60e-142 | 420 |
| Msa0523080 | AT1G30755.2 | 51.253 | 439 | 202 | 4 | 1 | 427 | 1 | 439 | 3.60e-142 | 420 |
| Msa0523080 | AT5G08660.3 | 45.951 | 494 | 237 | 10 | 76 | 560 | 103 | 575 | 1.16e-128 | 392 |
| Msa0523080 | AT5G08660.1 | 45.951 | 494 | 237 | 10 | 76 | 560 | 103 | 575 | 1.16e-128 | 392 |
| Msa0523080 | AT5G08660.4 | 45.951 | 494 | 237 | 10 | 76 | 560 | 103 | 575 | 1.16e-128 | 392 |
| Msa0523080 | AT5G08660.2 | 51.882 | 372 | 169 | 4 | 76 | 441 | 103 | 470 | 2.72e-112 | 344 |
| Msa0523080 | AT5G51670.1 | 24.703 | 421 | 252 | 8 | 122 | 483 | 37 | 451 | 8.44e-26 | 111 |
| Msa0523080 | AT5G51670.2 | 24.703 | 421 | 252 | 8 | 122 | 483 | 37 | 451 | 8.44e-26 | 111 |
| Msa0523080 | AT3G23160.1 | 28.972 | 214 | 139 | 4 | 122 | 330 | 43 | 248 | 1.27e-16 | 83.6 |
| Msa0523080 | AT3G23160.1 | 32.692 | 156 | 89 | 4 | 343 | 493 | 361 | 505 | 1.55e-14 | 77.0 |
| Msa0523080 | AT5G04550.1 | 30.921 | 152 | 88 | 2 | 339 | 483 | 429 | 570 | 2.01e-12 | 70.5 |
| Msa0523080 | AT5G04550.1 | 28.372 | 215 | 133 | 5 | 122 | 327 | 26 | 228 | 3.50e-12 | 69.7 |
| Msa0523080 | AT5G04550.2 | 30.921 | 152 | 88 | 2 | 339 | 483 | 429 | 570 | 2.01e-12 | 70.5 |
| Msa0523080 | AT5G04550.2 | 28.372 | 215 | 133 | 5 | 122 | 327 | 26 | 228 | 3.50e-12 | 69.7 |
Find 170 sgRNAs with CRISPR-Local
Find 450 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGAGGTTATACCTCTTTC+TGG | 0.206036 | 3_4:+76434722 | None:intergenic |
| CACTAGAAAGGGCTCTTTAT+TGG | 0.209748 | 3_4:-76437679 | Msa0523080:CDS |
| TATAATGTGTCCCTCGTATT+TGG | 0.226029 | 3_4:+76434805 | None:intergenic |
| GCGAATTGGGTTGCTTTCTT+TGG | 0.239633 | 3_4:+76434125 | None:intergenic |
| ACTTGGAGGGATGAACAATT+TGG | 0.261598 | 3_4:-76439077 | Msa0523080:CDS |
| CTGTTTGTTCGGCGGGGATG+GGG | 0.262647 | 3_4:-76439117 | Msa0523080:CDS |
| AGCTGTTTGTTCGGCGGGGA+TGG | 0.294101 | 3_4:-76439119 | Msa0523080:CDS |
| GCTGTTTGTTCGGCGGGGAT+GGG | 0.295470 | 3_4:-76439118 | Msa0523080:CDS |
| TGTTTACATTATTGAATTGT+TGG | 0.296282 | 3_4:-76434064 | Msa0523080:CDS |
| CTTGGAGGGATGAACAATTT+GGG | 0.298151 | 3_4:-76439076 | Msa0523080:CDS |
| AGTATGTAGATTATTATAAA+AGG | 0.300075 | 3_4:+76439194 | None:intergenic |
| ATATACCTCCTCTAAATATC+TGG | 0.305237 | 3_4:+76436090 | None:intergenic |
| TTCACCTGATAAGGAGTTCT+TGG | 0.308165 | 3_4:-76433737 | Msa0523080:CDS |
| AAGCAAAACAAGCTAGAAAA+TGG | 0.311419 | 3_4:-76438971 | Msa0523080:CDS |
| CCACCACAACTATAATGTTT+TGG | 0.311902 | 3_4:-76433695 | Msa0523080:CDS |
| ATGAACAATTTGGGGTTCTC+TGG | 0.312989 | 3_4:-76439067 | Msa0523080:CDS |
| AGAAAGTGAGTGAAATAAAA+TGG | 0.316068 | 3_4:+76437500 | None:intergenic |
| TATTGGGTAAAGCTAGCTAT+AGG | 0.317617 | 3_4:-76437662 | Msa0523080:CDS |
| TTTGGTCTTGAGAGGGTGCC+TGG | 0.318517 | 3_4:+76433771 | None:intergenic |
| CTATCCACTTCCGCTTCAAT+TGG | 0.319467 | 3_4:-76438929 | Msa0523080:CDS |
| TAAAATCATGAGTTTATATA+TGG | 0.322145 | 3_4:+76433514 | None:intergenic |
| TCACGGGAAGTAGTTAGATT+TGG | 0.323364 | 3_4:-76437259 | Msa0523080:CDS |
| AACATCTATCTTCTGCTTAT+CGG | 0.328434 | 3_4:+76434083 | None:intergenic |
| TCTTTGGTCCAGATATTTAG+AGG | 0.343093 | 3_4:-76436098 | Msa0523080:CDS |
| ACTAGAAAGGGCTCTTTATT+GGG | 0.349692 | 3_4:-76437678 | Msa0523080:CDS |
| GTGAAATAAAATGGCTCCTT+TGG | 0.349733 | 3_4:+76437509 | None:intergenic |
| AGGGAAGAAAATATCAATAT+TGG | 0.349870 | 3_4:-76437556 | Msa0523080:CDS |
| GTTCATAAGCACTTAATTCA+TGG | 0.354686 | 3_4:+76436642 | None:intergenic |
| TAAAGTGTCTGGAGGCGAAT+TGG | 0.362664 | 3_4:+76434111 | None:intergenic |
| AGCAAAGGAGAATTATGAAA+TGG | 0.363651 | 3_4:+76439220 | None:intergenic |
| AGGTGAACTCCCAGCACTTT+TGG | 0.367675 | 3_4:+76433753 | None:intergenic |
| CAGATTAGACTTGGATGTCT+TGG | 0.372829 | 3_4:-76437055 | Msa0523080:CDS |
| TCTAATAATATCCTATCTTC+TGG | 0.378873 | 3_4:+76433868 | None:intergenic |
| GTACCCAAGAACTCCTTATC+AGG | 0.382837 | 3_4:+76433733 | None:intergenic |
| GTATTTGGAGGAAGGGAGGC+TGG | 0.382938 | 3_4:+76434820 | None:intergenic |
| CCAGCTTCACCTAGTCTTTG+AGG | 0.388523 | 3_4:+76434983 | None:intergenic |
| CGCATCTTAGACTGAAGTTC+AGG | 0.389412 | 3_4:+76433949 | None:intergenic |
| AACAGGGCTCATCAAGGCTT+TGG | 0.390105 | 3_4:-76434332 | Msa0523080:intron |
| TACCTCTTTCTGGATAGAAA+TGG | 0.393069 | 3_4:+76434732 | None:intergenic |
| ACAATTAGTCTCAACAGATA+TGG | 0.394875 | 3_4:-76437424 | Msa0523080:CDS |
| CCACCACTGGTGTTTAACTT+TGG | 0.408588 | 3_4:+76437603 | None:intergenic |
| CTTTGGATGGGTTGGTGAAT+GGG | 0.411171 | 3_4:-76434315 | Msa0523080:CDS |
| GCTTTGGATGGGTTGGTGAA+TGG | 0.411360 | 3_4:-76434316 | Msa0523080:CDS |
| CGTGAGTTCCTTGGAAATCA+TGG | 0.412240 | 3_4:-76435818 | Msa0523080:intron |
| ATTGGGTAAAGCTAGCTATA+GGG | 0.415408 | 3_4:-76437661 | Msa0523080:CDS |
| ACGAATTGCTTGATGTATAT+AGG | 0.416690 | 3_4:+76435838 | None:intergenic |
| TGCTGGGAGTTCACCTGATA+AGG | 0.417744 | 3_4:-76433746 | Msa0523080:CDS |
| TTGGATATTATGGATGGCTT+AGG | 0.420907 | 3_4:-76433676 | Msa0523080:CDS |
| ATGGGAGCTGTTTGTTCGGC+GGG | 0.424396 | 3_4:-76439124 | Msa0523080:CDS |
| AGGGCACTCTTAATACTGTT+TGG | 0.425261 | 3_4:+76434772 | None:intergenic |
| CAAGCAATTCGTGAGTTCCT+TGG | 0.428629 | 3_4:-76435827 | Msa0523080:CDS |
| ACCAGTGGTGGGTTTGTCTC+TGG | 0.431852 | 3_4:-76437591 | Msa0523080:CDS |
| TATCCACTTCCGCTTCAATT+GGG | 0.432097 | 3_4:-76438928 | Msa0523080:CDS |
| CTCTGGGAAGGTTCTTAAGA+AGG | 0.438542 | 3_4:-76439050 | Msa0523080:CDS |
| AGACTGAAGTTCAGGTCTCT+TGG | 0.440141 | 3_4:+76433957 | None:intergenic |
| AATTTCAAGGAGGAGGAGCC+CGG | 0.440803 | 3_4:-76433839 | Msa0523080:CDS |
| TTGATTGTATTTGCCGCAAA+TGG | 0.442663 | 3_4:+76434505 | None:intergenic |
| AGAAGATAGGATATTATTAG+AGG | 0.443661 | 3_4:-76433866 | Msa0523080:CDS |
| AGATTAGACTTGGATGTCTT+GGG | 0.448582 | 3_4:-76437054 | Msa0523080:CDS |
| CATCAAGGCTTTGGATGGGT+TGG | 0.449569 | 3_4:-76434323 | Msa0523080:CDS |
| GCAAAGGAGAATTATGAAAT+GGG | 0.450142 | 3_4:+76439221 | None:intergenic |
| AAAGTGTCTGGAGGCGAATT+GGG | 0.454666 | 3_4:+76434112 | None:intergenic |
| GAGAGCAATGCAGAAGAACT+TGG | 0.459267 | 3_4:-76439094 | Msa0523080:CDS |
| GACCGTGTGGGCATTGCCAT+TGG | 0.460170 | 3_4:+76433988 | None:intergenic |
| TATTAGAGGAGGTAATTTCA+AGG | 0.460679 | 3_4:-76433852 | Msa0523080:CDS |
| TGAACAATTTGGGGTTCTCT+GGG | 0.462361 | 3_4:-76439066 | Msa0523080:CDS |
| TGTTTGTTCGGCGGGGATGG+GGG | 0.464288 | 3_4:-76439116 | Msa0523080:CDS |
| ACATTATTGAATTGTTGGTA+TGG | 0.467171 | 3_4:-76434059 | Msa0523080:CDS |
| CTCAACTTTCTCCAGAAGAT+AGG | 0.474373 | 3_4:-76433879 | Msa0523080:CDS |
| TCACCTGATAAGGAGTTCTT+GGG | 0.476603 | 3_4:-76433736 | Msa0523080:CDS |
| CTTATCATAGGTCACTAGAA+AGG | 0.481697 | 3_4:-76437691 | Msa0523080:intron |
| GGGCTCATCAAGGCTTTGGA+TGG | 0.482723 | 3_4:-76434328 | Msa0523080:CDS |
| TTCCCCAATTGAAGCGGAAG+TGG | 0.483971 | 3_4:+76438925 | None:intergenic |
| GACAGAAACAACAAGCCATT+GGG | 0.486617 | 3_4:-76433904 | Msa0523080:CDS |
| CCTCTCAAGACCAAAAGTGC+TGG | 0.487668 | 3_4:-76433763 | Msa0523080:CDS |
| AACATTATAGTTGTGGTGGT+TGG | 0.492883 | 3_4:+76433699 | None:intergenic |
| CTCTCAAGACCAAAAGTGCT+GGG | 0.492885 | 3_4:-76433762 | Msa0523080:CDS |
| TATCGGCGTAGTAAAGTGTC+TGG | 0.492972 | 3_4:+76434100 | None:intergenic |
| ACCTTTCAGAGGAAGATTCA+AGG | 0.494840 | 3_4:+76436577 | None:intergenic |
| CAATTTGGGGTTCTCTGGGA+AGG | 0.497243 | 3_4:-76439062 | Msa0523080:CDS |
| TGACATTGCAGTAACGACTT+TGG | 0.497519 | 3_4:-76434159 | Msa0523080:intron |
| GGAGAATTATGAAATGGGTT+GGG | 0.497541 | 3_4:+76439226 | None:intergenic |
| AGGAGAATTATGAAATGGGT+TGG | 0.498869 | 3_4:+76439225 | None:intergenic |
| TTATCATAGGTCACTAGAAA+GGG | 0.499151 | 3_4:-76437690 | Msa0523080:intron |
| AGGAGGTAATTTCAAGGAGG+AGG | 0.509239 | 3_4:-76433846 | Msa0523080:CDS |
| GATGTAGGTTGTGCCATTGT+GGG | 0.511411 | 3_4:+76437221 | None:intergenic |
| CGATGTAGGTTGTGCCATTG+TGG | 0.512886 | 3_4:+76437220 | None:intergenic |
| ATCCATTTCTATCCAGAAAG+AGG | 0.516436 | 3_4:-76434734 | Msa0523080:intron |
| AGACAGAAACAACAAGCCAT+TGG | 0.517679 | 3_4:-76433905 | Msa0523080:CDS |
| CCTCAAAGACTAGGTGAAGC+TGG | 0.518624 | 3_4:-76434983 | Msa0523080:CDS |
| CAAGAATCTTCAAAAGAAGA+AGG | 0.518778 | 3_4:+76433608 | None:intergenic |
| ACGAGGGACACATTATATCA+AGG | 0.522467 | 3_4:-76434799 | Msa0523080:CDS |
| TATTATAAAAGGAGAAGCAA+AGG | 0.526644 | 3_4:+76439205 | None:intergenic |
| AATGGATGGTGAATAATTGT+CGG | 0.528573 | 3_4:+76433566 | None:intergenic |
| ATGAAATATCAGATTAGACT+TGG | 0.530537 | 3_4:-76437064 | Msa0523080:intron |
| GGCTCATCAAGGCTTTGGAT+GGG | 0.531203 | 3_4:-76434327 | Msa0523080:CDS |
| CATTCAGTTCCTCAAGAAGG+AGG | 0.532398 | 3_4:-76437469 | Msa0523080:CDS |
| AATTTAAAACCTCCTTCTTG+AGG | 0.532695 | 3_4:+76437460 | None:intergenic |
| GTGGAAGTTCTTGATACACT+TGG | 0.535597 | 3_4:-76437636 | Msa0523080:CDS |
| TTCCGCTTTGATATGAGTGA+AGG | 0.542865 | 3_4:+76434555 | None:intergenic |
| ATCCACTTCCGCTTCAATTG+GGG | 0.545527 | 3_4:-76438927 | Msa0523080:CDS |
| TCCTTGAATCTTCCTCTGAA+AGG | 0.546389 | 3_4:-76436578 | Msa0523080:intron |
| GGTGCTGTCAAGTATACTAA+AGG | 0.548639 | 3_4:-76435007 | Msa0523080:CDS |
| TATTTGGAGGAAGGGAGGCT+GGG | 0.551779 | 3_4:+76434821 | None:intergenic |
| GTTCTTGATACACTTGGAAG+TGG | 0.551965 | 3_4:-76437630 | Msa0523080:CDS |
| CTGCCAAGAAAACTCATGCC+AGG | 0.553142 | 3_4:-76433789 | Msa0523080:CDS |
| CCAAAGTTAAACACCAGTGG+TGG | 0.555780 | 3_4:-76437603 | Msa0523080:CDS |
| GCCAGAGACAAACCCACCAC+TGG | 0.556299 | 3_4:+76437590 | None:intergenic |
| AAGAATTCAATGTATTCTCA+CGG | 0.556407 | 3_4:-76437276 | Msa0523080:CDS |
| TATCCAAAACATTATAGTTG+TGG | 0.558251 | 3_4:+76433692 | None:intergenic |
| TCAGTGGCTCGTACCATTTG+CGG | 0.558291 | 3_4:-76434518 | Msa0523080:CDS |
| CCAAAACATTATAGTTGTGG+TGG | 0.558617 | 3_4:+76433695 | None:intergenic |
| GTCTCTGGCAAGCTTTCCAG+AGG | 0.561603 | 3_4:-76437576 | Msa0523080:CDS |
| AAACATTCAGTTCCTCAAGA+AGG | 0.562368 | 3_4:-76437472 | Msa0523080:CDS |
| ATCTTACAGAGCTAATCAAA+TGG | 0.562545 | 3_4:+76434031 | None:intergenic |
| TTGGAGGGATGAACAATTTG+GGG | 0.565256 | 3_4:-76439075 | Msa0523080:CDS |
| TGGATTGCAACCGAGATGGA+AGG | 0.565419 | 3_4:+76434752 | None:intergenic |
| GAAATGGATTGCAACCGAGA+TGG | 0.566963 | 3_4:+76434748 | None:intergenic |
| TGTCCCTCGTATTTGGAGGA+AGG | 0.567652 | 3_4:+76434812 | None:intergenic |
| AATGTGTCCCTCGTATTTGG+AGG | 0.568090 | 3_4:+76434808 | None:intergenic |
| AGATGCCGAAAAGACAATGC+AGG | 0.570619 | 3_4:-76437013 | Msa0523080:CDS |
| ATTAGCAAAAGTGAGGAACT+TGG | 0.571334 | 3_4:-76433814 | Msa0523080:CDS |
| GTCCCTCGTATTTGGAGGAA+GGG | 0.574579 | 3_4:+76434813 | None:intergenic |
| ACAAAATGCCTCGAGGCCAA+TGG | 0.577458 | 3_4:-76434004 | Msa0523080:CDS |
| ATTTCAAGGAGGAGGAGCCC+GGG | 0.577633 | 3_4:-76433838 | Msa0523080:CDS |
| TGAAGTTCAGGTCTCTTGGA+AGG | 0.578768 | 3_4:+76433961 | None:intergenic |
| AGAATTCAATGTATTCTCAC+GGG | 0.583054 | 3_4:-76437275 | Msa0523080:CDS |
| TTAAGAGTGCCCTTCCATCT+CGG | 0.586379 | 3_4:-76434762 | Msa0523080:CDS |
| GGCCAATGGCAATGCCCACA+CGG | 0.587290 | 3_4:-76433990 | Msa0523080:CDS |
| AATGGGAGCTGTTTGTTCGG+CGG | 0.589590 | 3_4:-76439125 | Msa0523080:CDS |
| ATTGTTAACAGGGCTCATCA+AGG | 0.593222 | 3_4:-76434338 | Msa0523080:intron |
| AGATAGGATATTATTAGAGG+AGG | 0.593450 | 3_4:-76433863 | Msa0523080:CDS |
| TAAAGCTAGCTATAGGGCGG+TGG | 0.594166 | 3_4:-76437655 | Msa0523080:CDS |
| TGTTCATACCATGATTTCCA+AGG | 0.595508 | 3_4:+76435810 | None:intergenic |
| GGATTGCAACCGAGATGGAA+GGG | 0.595874 | 3_4:+76434753 | None:intergenic |
| TAGAGGAGGTAATTTCAAGG+AGG | 0.599131 | 3_4:-76433849 | Msa0523080:CDS |
| ATATATCTGATTGATCATGT+TGG | 0.602694 | 3_4:+76434943 | None:intergenic |
| TCTAAGTTCTAACCTTTCAG+AGG | 0.602716 | 3_4:+76436566 | None:intergenic |
| GGAGAAAGTTGAGTTCCCAA+TGG | 0.606564 | 3_4:+76433889 | None:intergenic |
| ACTAAAGGTCCTCAAAGACT+AGG | 0.608726 | 3_4:-76434992 | Msa0523080:CDS |
| AGTGGATAGACCGAATTCAT+CGG | 0.617545 | 3_4:+76438943 | None:intergenic |
| GCAATGCAGAAGAACTTGGA+GGG | 0.623845 | 3_4:-76439090 | Msa0523080:CDS |
| CAAAGTTAAACACCAGTGGT+GGG | 0.625267 | 3_4:-76437602 | Msa0523080:CDS |
| CCTCCCTTCCTCCAAATACG+AGG | 0.628725 | 3_4:-76434816 | Msa0523080:CDS |
| ACCTTGAGAAATGTCGATGT+AGG | 0.628997 | 3_4:+76437206 | None:intergenic |
| GGGCATTGCCATTGGCCTCG+AGG | 0.630544 | 3_4:+76433996 | None:intergenic |
| ACCTACATCGACATTTCTCA+AGG | 0.631682 | 3_4:-76437207 | Msa0523080:intron |
| TTGGTGAATGGGCAAACACA+AGG | 0.636366 | 3_4:-76434304 | Msa0523080:intron |
| CCTCGTATTTGGAGGAAGGG+AGG | 0.639013 | 3_4:+76434816 | None:intergenic |
| GTAGCTAATACAATAACCAA+AGG | 0.639145 | 3_4:-76437525 | Msa0523080:CDS |
| GCTGAGAATTTACGACTCTG+AGG | 0.643521 | 3_4:+76439264 | None:intergenic |
| CTCCCTTCCTCCAAATACGA+GGG | 0.644751 | 3_4:-76434815 | Msa0523080:CDS |
| TTGGTCCAGATATTTAGAGG+AGG | 0.646740 | 3_4:-76436095 | Msa0523080:intron |
| AGTTCAGGTCTCTTGGAAGG+AGG | 0.660563 | 3_4:+76433964 | None:intergenic |
| AGCAATGCAGAAGAACTTGG+AGG | 0.662834 | 3_4:-76439091 | Msa0523080:CDS |
| CTCCTTCACTCATATCAAAG+CGG | 0.662984 | 3_4:-76434557 | Msa0523080:CDS |
| CCCGGGAATTAGCAAAAGTG+AGG | 0.666356 | 3_4:-76433821 | Msa0523080:CDS |
| CTTGGAAGGAGGAGACCGTG+TGG | 0.669539 | 3_4:+76433975 | None:intergenic |
| TTGGAAGGAGGAGACCGTGT+GGG | 0.672365 | 3_4:+76433976 | None:intergenic |
| CGGCGTAGTAAAGTGTCTGG+AGG | 0.672625 | 3_4:+76434103 | None:intergenic |
| TCTCTGGCAAGCTTTCCAGA+GGG | 0.673396 | 3_4:-76437575 | Msa0523080:CDS |
| TGGGAGCTGTTTGTTCGGCG+GGG | 0.678824 | 3_4:-76439123 | Msa0523080:CDS |
| ATGCCAAAGTTAAACACCAG+TGG | 0.681956 | 3_4:-76437606 | Msa0523080:CDS |
| GTGGTGGTTGGCGATGAGTG+TGG | 0.685493 | 3_4:+76433711 | None:intergenic |
| CTGAACTTCAGTCTAAGATG+CGG | 0.686840 | 3_4:-76433948 | Msa0523080:CDS |
| AAATGAATAAGACTCTTCAG+TGG | 0.700574 | 3_4:-76434534 | Msa0523080:CDS |
| GGGTAAAGCTAGCTATAGGG+CGG | 0.706000 | 3_4:-76437658 | Msa0523080:CDS |
| ATATGTGTAAAGACCCACAA+TGG | 0.711309 | 3_4:-76437234 | Msa0523080:CDS |
| TAGTCTAGTTCATCATACTG+CGG | 0.726979 | 3_4:-76436983 | Msa0523080:intron |
| GATCCAGACAAAATGCCTCG+AGG | 0.746283 | 3_4:-76434011 | Msa0523080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACAATCTATATAAATTA+GGG | + | chr3_4:76434840-76434859 | None:intergenic | 10.0% |
| !! | ATAAACAATCTATATAAATT+AGG | + | chr3_4:76434841-76434860 | None:intergenic | 10.0% |
| !!! | TTATCTTTTTGAAATTTTTA+GGG | - | chr3_4:76435468-76435487 | Msa0523080:intron | 10.0% |
| !! | TTTATTAATTAATTATGAGT+TGG | + | chr3_4:76435648-76435667 | None:intergenic | 10.0% |
| !! | ATATATAATATAAAAGATCT+AGG | + | chr3_4:76435933-76435952 | None:intergenic | 10.0% |
| !!! | AATATATTTTTGACAAAAAA+AGG | + | chr3_4:76436440-76436459 | None:intergenic | 10.0% |
| !!! | ATTTAAAATAAAAATTAGCA+GGG | + | chr3_4:76437424-76437443 | None:intergenic | 10.0% |
| !!! | AATTTAAAATAAAAATTAGC+AGG | + | chr3_4:76437425-76437444 | None:intergenic | 10.0% |
| !! | ATTAAAATTGTACAAAAAAA+TGG | + | chr3_4:76439222-76439241 | None:intergenic | 10.0% |
| !! | AGTATGTAGATTATTATAAA+AGG | + | chr3_4:76433576-76433595 | None:intergenic | 15.0% |
| !! | AAGAAGAATACAAATAAAAA+TGG | - | chr3_4:76433624-76433643 | Msa0523080:three_prime_UTR | 15.0% |
| !! | AGAAGAATACAAATAAAAAT+GGG | - | chr3_4:76433625-76433644 | Msa0523080:three_prime_UTR | 15.0% |
| !! | AATATAAACTCCTAAAATTA+TGG | - | chr3_4:76434321-76434340 | Msa0523080:CDS | 15.0% |
| !!! | CTTATCTTTTTGAAATTTTT+AGG | - | chr3_4:76435467-76435486 | Msa0523080:intron | 15.0% |
| !! | TGATTATCAACAAAAAATTA+AGG | - | chr3_4:76436158-76436177 | Msa0523080:CDS | 15.0% |
| !! | TTATTAAAATGAATACTTCT+TGG | - | chr3_4:76436279-76436298 | Msa0523080:intron | 15.0% |
| !!! | ATGTATATTGTAAATTTTTC+TGG | - | chr3_4:76437368-76437387 | Msa0523080:intron | 15.0% |
| !! | TTGAATTATGCTAAATTTAA+TGG | - | chr3_4:76438172-76438191 | Msa0523080:intron | 15.0% |
| !!! | TGAAATTTTCGTTTATTTAT+AGG | - | chr3_4:76439118-76439137 | Msa0523080:CDS | 15.0% |
| !! | TAAAATCATGAGTTTATATA+TGG | + | chr3_4:76439256-76439275 | None:intergenic | 15.0% |
| !!! | TCTTTTATAGTTAAGACTTA+AGG | - | chr3_4:76433969-76433988 | Msa0523080:CDS | 20.0% |
| !!! | TTAAACATGGTTTTAAATTG+CGG | + | chr3_4:76434074-76434093 | None:intergenic | 20.0% |
| !! | TTATATTACTTAACCCATTT+GGG | + | chr3_4:76434308-76434327 | None:intergenic | 20.0% |
| !! | TTTATATTACTTAACCCATT+TGG | + | chr3_4:76434309-76434328 | None:intergenic | 20.0% |
| !! | AGTGATACTAATAGTAAAAA+GGG | + | chr3_4:76434613-76434632 | None:intergenic | 20.0% |
| !! | AATCTATATAAATTAGGGAA+GGG | + | chr3_4:76434835-76434854 | None:intergenic | 20.0% |
| !! | AAATTCATAGCAAAAACAAA+AGG | + | chr3_4:76435429-76435448 | None:intergenic | 20.0% |
| !! | TTTCAAAAAGATAAGTGATA+AGG | + | chr3_4:76435462-76435481 | None:intergenic | 20.0% |
| !!! | CTAATCTGATATTTCATTTT+CGG | + | chr3_4:76435700-76435719 | None:intergenic | 20.0% |
| !! | AGAAACTAAAAAAATGACAA+TGG | + | chr3_4:76435883-76435902 | None:intergenic | 20.0% |
| !! | TATAAAAGATCTAGGAATTA+AGG | + | chr3_4:76435925-76435944 | None:intergenic | 20.0% |
| !!! | TAATTTTCTCGTTTTAATGT+AGG | - | chr3_4:76436095-76436114 | Msa0523080:intron | 20.0% |
| !! | TCAACAAAAAATTAAGGAAA+TGG | - | chr3_4:76436164-76436183 | Msa0523080:CDS | 20.0% |
| !!! | CTATTTTATCTTAACATTTG+AGG | - | chr3_4:76436338-76436357 | Msa0523080:intron | 20.0% |
| !! | TTGAAAACCAAATTCTTATT+GGG | + | chr3_4:76436388-76436407 | None:intergenic | 20.0% |
| !! | TTTGAAAACCAAATTCTTAT+TGG | + | chr3_4:76436389-76436408 | None:intergenic | 20.0% |
| !!! | TTCTGAGGATTTAAATTTTT+AGG | + | chr3_4:76436534-76436553 | None:intergenic | 20.0% |
| !!! | AGGAGGTATATTATTAATAA+AGG | - | chr3_4:76436689-76436708 | Msa0523080:intron | 20.0% |
| !!! | TTTTCTTCAATAAAAAGAGA+AGG | + | chr3_4:76437116-76437135 | None:intergenic | 20.0% |
| !! | TCTAAATTGTTATGAAATTG+TGG | - | chr3_4:76437721-76437740 | Msa0523080:intron | 20.0% |
| !! | CTAAATTGTTATGAAATTGT+GGG | - | chr3_4:76437722-76437741 | Msa0523080:intron | 20.0% |
| !! | ACGAAAACATTTATTTGATT+AGG | + | chr3_4:76437891-76437910 | None:intergenic | 20.0% |
| !!! | TCTAGTCCTTTTTAATTTTT+TGG | - | chr3_4:76438097-76438116 | Msa0523080:intron | 20.0% |
| !! | AATAAATTTCAATCTTCAAG+AGG | + | chr3_4:76438147-76438166 | None:intergenic | 20.0% |
| !!! | AAAAATATTTAAAACCTGAC+AGG | + | chr3_4:76438325-76438344 | None:intergenic | 20.0% |
| !! | TGTTTACATTATTGAATTGT+TGG | - | chr3_4:76438703-76438722 | Msa0523080:intron | 20.0% |
| !!! | CTATAATGTTTTGGATATTA+TGG | - | chr3_4:76439081-76439100 | Msa0523080:CDS | 20.0% |
| !! | AAATTGTACAAAAAAATGGA+TGG | + | chr3_4:76439218-76439237 | None:intergenic | 20.0% |
| ! | TATTATAAAAGGAGAAGCAA+AGG | + | chr3_4:76433565-76433584 | None:intergenic | 25.0% |
| !! | AGGAAAACAGTTTTACAAAT+CGG | - | chr3_4:76433737-76433756 | Msa0523080:CDS | 25.0% |
| !!! | AAGATGATTTTTCAGATTCA+AGG | - | chr3_4:76433761-76433780 | Msa0523080:CDS | 25.0% |
| !!! | TCAAACTTTTTTTGAGAACT+CGG | - | chr3_4:76434117-76434136 | Msa0523080:CDS | 25.0% |
| ! | GAGTGATACTAATAGTAAAA+AGG | + | chr3_4:76434614-76434633 | None:intergenic | 25.0% |
| ! | ATCTATATAAATTAGGGAAG+GGG | + | chr3_4:76434834-76434853 | None:intergenic | 25.0% |
| ! | CAATCTATATAAATTAGGGA+AGG | + | chr3_4:76434836-76434855 | None:intergenic | 25.0% |
| !!! | AGTAAAAAAGTACTGAAGTT+AGG | + | chr3_4:76434963-76434982 | None:intergenic | 25.0% |
| ! | AGGGAAGAAAATATCAATAT+TGG | - | chr3_4:76435211-76435230 | Msa0523080:intron | 25.0% |
| ! | AGAAAGTGAGTGAAATAAAA+TGG | + | chr3_4:76435270-76435289 | None:intergenic | 25.0% |
| ! | AAGAATTCAATGTATTCTCA+CGG | - | chr3_4:76435491-76435510 | Msa0523080:intron | 25.0% |
| ! | ATGAAATATCAGATTAGACT+TGG | - | chr3_4:76435703-76435722 | Msa0523080:intron | 25.0% |
| !! | TGCATAATCTTTTATCTCAT+TGG | - | chr3_4:76435836-76435855 | Msa0523080:CDS | 25.0% |
| !! | TTCTTTGCTTGTTAAAGTTA+GGG | - | chr3_4:76436035-76436054 | Msa0523080:intron | 25.0% |
| ! | ATACCAAGATTTGACAAAAA+GGG | + | chr3_4:76436255-76436274 | None:intergenic | 25.0% |
| ! | AATACCAAGATTTGACAAAA+AGG | + | chr3_4:76436256-76436275 | None:intergenic | 25.0% |
| !! | TTTTATCTTAACATTTGAGG+TGG | - | chr3_4:76436341-76436360 | Msa0523080:intron | 25.0% |
| ! | TAGTTATCCCAATAAGAATT+TGG | - | chr3_4:76436378-76436397 | Msa0523080:intron | 25.0% |
| ! | GTCAAAAATATATTCTTTCC+TGG | - | chr3_4:76436446-76436465 | Msa0523080:intron | 25.0% |
| ! | TTCATCTGAAAATATTTCTC+AGG | + | chr3_4:76436475-76436494 | None:intergenic | 25.0% |
| ! | AGAAGTTATCTAATGATTGA+CGG | - | chr3_4:76436550-76436569 | Msa0523080:intron | 25.0% |
| ! | ACTTGAAAAAGAAATCTCTT+TGG | - | chr3_4:76436653-76436672 | Msa0523080:CDS | 25.0% |
| ! | TAATATCCAAAACTTCATTC+AGG | + | chr3_4:76436770-76436789 | None:intergenic | 25.0% |
| ! | AATAAAAAGAGAAGGAATGT+GGG | + | chr3_4:76437108-76437127 | None:intergenic | 25.0% |
| ! | AAGAATCATGACATATAGAT+AGG | + | chr3_4:76437150-76437169 | None:intergenic | 25.0% |
| ! | AAAACGAGCATAAAAAAGAT+TGG | + | chr3_4:76437204-76437223 | None:intergenic | 25.0% |
| ! | TACATAGCGTTTATTTACAA+GGG | + | chr3_4:76437353-76437372 | None:intergenic | 25.0% |
| ! | ATACATAGCGTTTATTTACA+AGG | + | chr3_4:76437354-76437373 | None:intergenic | 25.0% |
| !!! | TTCTGCTAAATCATTTTTTC+TGG | - | chr3_4:76437504-76437523 | Msa0523080:CDS | 25.0% |
| !!! | GGAATTCCTTAATCATTTTT+TGG | - | chr3_4:76437578-76437597 | Msa0523080:CDS | 25.0% |
| ! | CACAAACCAAAAAATGATTA+AGG | + | chr3_4:76437587-76437606 | None:intergenic | 25.0% |
| ! | TAACTCATAACAACATCTAA+TGG | - | chr3_4:76437691-76437710 | Msa0523080:intron | 25.0% |
| ! | ATATATCTGATTGATCATGT+TGG | + | chr3_4:76437827-76437846 | None:intergenic | 25.0% |
| !!! | AGTCCTTTTTAATTTTTTGG+TGG | - | chr3_4:76438100-76438119 | Msa0523080:intron | 25.0% |
| !!! | GTCCTTTTTAATTTTTTGGT+GGG | - | chr3_4:76438101-76438120 | Msa0523080:intron | 25.0% |
| ! | TACCCACCAAAAAATTAAAA+AGG | + | chr3_4:76438106-76438125 | None:intergenic | 25.0% |
| !!! | TTTAATTTTTTGGTGGGTAT+TGG | - | chr3_4:76438107-76438126 | Msa0523080:intron | 25.0% |
| !!! | TTAATTTTTTGGTGGGTATT+GGG | - | chr3_4:76438108-76438127 | Msa0523080:intron | 25.0% |
| ! | GTTATTTGTTCACATTATAC+AGG | + | chr3_4:76438536-76438555 | None:intergenic | 25.0% |
| ! | TAATGTGAACAAATAACAAG+TGG | - | chr3_4:76438539-76438558 | Msa0523080:intron | 25.0% |
| ! | ACATTATTGAATTGTTGGTA+TGG | - | chr3_4:76438708-76438727 | Msa0523080:intron | 25.0% |
| ! | TCTAATAATATCCTATCTTC+TGG | + | chr3_4:76438902-76438921 | None:intergenic | 25.0% |
| ! | AGAAGATAGGATATTATTAG+AGG | - | chr3_4:76438901-76438920 | Msa0523080:intron | 25.0% |
| ! | TATCCAAAACATTATAGTTG+TGG | + | chr3_4:76439078-76439097 | None:intergenic | 25.0% |
| !!! | AATGTTTTGGATATTATGGA+TGG | - | chr3_4:76439085-76439104 | Msa0523080:CDS | 25.0% |
| ! | AATAATTGTCGGCATAAAAA+AGG | + | chr3_4:76439193-76439212 | None:intergenic | 25.0% |
| GCAAAGGAGAATTATGAAAT+GGG | + | chr3_4:76433549-76433568 | None:intergenic | 30.0% | |
| AGCAAAGGAGAATTATGAAA+TGG | + | chr3_4:76433550-76433569 | None:intergenic | 30.0% | |
| AAGCAAAACAAGCTAGAAAA+TGG | - | chr3_4:76433796-76433815 | Msa0523080:CDS | 30.0% | |
| ATAGTTAAGACTTAAGGACA+TGG | - | chr3_4:76433975-76433994 | Msa0523080:CDS | 30.0% | |
| !!! | ATGGCTATGGTTTTAAATTG+CGG | - | chr3_4:76433994-76434013 | Msa0523080:CDS | 30.0% |
| ! | ACGCGATTTAACATATTTTG+AGG | + | chr3_4:76434040-76434059 | None:intergenic | 30.0% |
| TTGAATGCAAAAATTCAGCT+TGG | + | chr3_4:76434101-76434120 | None:intergenic | 30.0% | |
| CTCCTAAAATTATGGAATTC+CGG | - | chr3_4:76434329-76434348 | Msa0523080:CDS | 30.0% | |
| ! | TTCCGGAATTCCATAATTTT+AGG | + | chr3_4:76434334-76434353 | None:intergenic | 30.0% |
| AAATTATGGAATTCCGGAAA+TGG | - | chr3_4:76434335-76434354 | Msa0523080:intron | 30.0% | |
| AATTTGAACTTTGTCTCTTG+GGG | + | chr3_4:76434417-76434436 | None:intergenic | 30.0% | |
| GAATTTGAACTTTGTCTCTT+GGG | + | chr3_4:76434418-76434437 | None:intergenic | 30.0% | |
| ! | CATTTTACAAATATCCCTGA+GGG | + | chr3_4:76434440-76434459 | None:intergenic | 30.0% |
| ! | TCATTTTACAAATATCCCTG+AGG | + | chr3_4:76434441-76434460 | None:intergenic | 30.0% |
| GTATCACTTAAAAACATAGC+TGG | - | chr3_4:76434467-76434486 | Msa0523080:intron | 30.0% | |
| TGCAAATAGAAACTCCATAT+CGG | + | chr3_4:76434512-76434531 | None:intergenic | 30.0% | |
| !!! | TATCTTTTTTTCCACTTTGC+TGG | - | chr3_4:76434538-76434557 | Msa0523080:CDS | 30.0% |
| !!! | ATCTTTTTTTCCACTTTGCT+GGG | - | chr3_4:76434539-76434558 | Msa0523080:CDS | 30.0% |
| CATAAGTGTAATATGACAGA+AGG | - | chr3_4:76434648-76434667 | Msa0523080:intron | 30.0% | |
| TCTATATAAATTAGGGAAGG+GGG | + | chr3_4:76434833-76434852 | None:intergenic | 30.0% | |
| !! | TTCACTTTGAGATTCTAGTA+TGG | - | chr3_4:76434983-76435002 | Msa0523080:CDS | 30.0% |
| GAAATTTAGTGTCTCATGAT+TGG | - | chr3_4:76435045-76435064 | Msa0523080:intron | 30.0% | |
| TTATCATAGGTCACTAGAAA+GGG | - | chr3_4:76435077-76435096 | Msa0523080:intron | 30.0% | |
| ! | TATTGATATTTTCTTCCCTC+TGG | + | chr3_4:76435210-76435229 | None:intergenic | 30.0% |
| GTAGCTAATACAATAACCAA+AGG | - | chr3_4:76435242-76435261 | Msa0523080:intron | 30.0% | |
| ! | AATTTAAAACCTCCTTCTTG+AGG | + | chr3_4:76435310-76435329 | None:intergenic | 30.0% |
| !!! | AAGGAGGTTTTAAATTCAGA+AGG | - | chr3_4:76435314-76435333 | Msa0523080:intron | 30.0% |
| ! | ACAATTAGTCTCAACAGATA+TGG | - | chr3_4:76435343-76435362 | Msa0523080:intron | 30.0% |
| ! | GTTAATAAGTTTTGCTGAGA+TGG | - | chr3_4:76435370-76435389 | Msa0523080:intron | 30.0% |
| ATAAGTGATAAGGAACACAA+AGG | + | chr3_4:76435452-76435471 | None:intergenic | 30.0% | |
| AGAATTCAATGTATTCTCAC+GGG | - | chr3_4:76435492-76435511 | Msa0523080:intron | 30.0% | |
| TCATAAATAAGCAACGTATC+AGG | + | chr3_4:76435593-76435612 | None:intergenic | 30.0% | |
| ACGTTGCTTATTTATGACAA+CGG | - | chr3_4:76435596-76435615 | Msa0523080:intron | 30.0% | |
| GAAAAACATATGAATACACC+TGG | + | chr3_4:76435977-76435996 | None:intergenic | 30.0% | |
| ! | GTTCTTTGCTTGTTAAAGTT+AGG | - | chr3_4:76436034-76436053 | Msa0523080:intron | 30.0% |
| !! | TTCCATTGAATGCTTTTTGT+AGG | - | chr3_4:76436059-76436078 | Msa0523080:intron | 30.0% |
| !! | AACCTACAAAAAGCATTCAA+TGG | + | chr3_4:76436064-76436083 | None:intergenic | 30.0% |
| GTTCATAAGCACTTAATTCA+TGG | + | chr3_4:76436128-76436147 | None:intergenic | 30.0% | |
| TACCAAGATTTGACAAAAAG+GGG | + | chr3_4:76436254-76436273 | None:intergenic | 30.0% | |
| AAGGAATTACTCCTATCAAT+GGG | + | chr3_4:76436421-76436440 | None:intergenic | 30.0% | |
| AAAGGAATTACTCCTATCAA+TGG | + | chr3_4:76436422-76436441 | None:intergenic | 30.0% | |
| CAATCATTAGATAACTTCTG+AGG | + | chr3_4:76436549-76436568 | None:intergenic | 30.0% | |
| ATATACCTCCTCTAAATATC+TGG | + | chr3_4:76436680-76436699 | None:intergenic | 30.0% | |
| ACGAATTGCTTGATGTATAT+AGG | + | chr3_4:76436932-76436951 | None:intergenic | 30.0% | |
| CAATAAAAAGAGAAGGAATG+TGG | + | chr3_4:76437109-76437128 | None:intergenic | 30.0% | |
| !! | GAAAGCTTTATTTGGAATCA+TGG | - | chr3_4:76437392-76437411 | Msa0523080:CDS | 30.0% |
| TAATCACATTATTAGAGCCA+TGG | + | chr3_4:76437472-76437491 | None:intergenic | 30.0% | |
| !! | ATGGCTCTAATAATGTGATT+AGG | - | chr3_4:76437471-76437490 | Msa0523080:CDS | 30.0% |
| !!! | GCTAAATCATTTTTTCTGGA+TGG | - | chr3_4:76437508-76437527 | Msa0523080:CDS | 30.0% |
| !!! | ATCATTTTTTCTGGATGGAT+TGG | - | chr3_4:76437513-76437532 | Msa0523080:CDS | 30.0% |
| !! | GCTTACTAAGTAAAAGCATT+TGG | - | chr3_4:76437535-76437554 | Msa0523080:CDS | 30.0% |
| GAAAACTGTGAGATCATTAA+GGG | - | chr3_4:76437557-76437576 | Msa0523080:CDS | 30.0% | |
| ! | GTTATGAAATTGTGGGTTAA+TGG | - | chr3_4:76437729-76437748 | Msa0523080:intron | 30.0% |
| TTTATTGCGCTAACAGAATT+TGG | - | chr3_4:76437861-76437880 | Msa0523080:intron | 30.0% | |
| TTATTGCGCTAACAGAATTT+GGG | - | chr3_4:76437862-76437881 | Msa0523080:intron | 30.0% | |
| ACTAGAAATTGCAAGACAAA+TGG | + | chr3_4:76438083-76438102 | None:intergenic | 30.0% | |
| AAATGAATAAGACTCTTCAG+TGG | - | chr3_4:76438233-76438252 | Msa0523080:intron | 30.0% | |
| ! | TATTTAAAACCTGACAGGTA+TGG | + | chr3_4:76438320-76438339 | None:intergenic | 30.0% |
| TATTTCCAGCTAAGAAAACA+AGG | + | chr3_4:76438365-76438384 | None:intergenic | 30.0% | |
| TACTTGTCGATATTGTTAAC+AGG | - | chr3_4:76438418-76438437 | Msa0523080:intron | 30.0% | |
| ACTTGTCGATATTGTTAACA+GGG | - | chr3_4:76438419-76438438 | Msa0523080:intron | 30.0% | |
| AACATCTATCTTCTGCTTAT+CGG | + | chr3_4:76438687-76438706 | None:intergenic | 30.0% | |
| ATCTTACAGAGCTAATCAAA+TGG | + | chr3_4:76438739-76438758 | None:intergenic | 30.0% | |
| AGATAGGATATTATTAGAGG+AGG | - | chr3_4:76438904-76438923 | Msa0523080:intron | 30.0% | |
| TATTAGAGGAGGTAATTTCA+AGG | - | chr3_4:76438915-76438934 | Msa0523080:intron | 30.0% | |
| GAAGGAAAAAAAATAGTGCA+AGG | + | chr3_4:76439144-76439163 | None:intergenic | 30.0% | |
| CAAGAATCTTCAAAAGAAGA+AGG | + | chr3_4:76439162-76439181 | None:intergenic | 30.0% | |
| !! | CTTCTTCTTTTGAAGATTCT+TGG | - | chr3_4:76439160-76439179 | Msa0523080:five_prime_UTR | 30.0% |
| AATGGATGGTGAATAATTGT+CGG | + | chr3_4:76439204-76439223 | None:intergenic | 30.0% | |
| ! | GGAGAATTATGAAATGGGTT+GGG | + | chr3_4:76433544-76433563 | None:intergenic | 35.0% |
| AGGAGAATTATGAAATGGGT+TGG | + | chr3_4:76433545-76433564 | None:intergenic | 35.0% | |
| AAAAATGGGAGCTGTTTGTT+CGG | - | chr3_4:76433639-76433658 | Msa0523080:three_prime_UTR | 35.0% | |
| ! | AATGGCTTTTCCGATGAATT+CGG | - | chr3_4:76433814-76433833 | Msa0523080:CDS | 35.0% |
| TCAGCTTGGTTTCTTAAACA+TGG | + | chr3_4:76434087-76434106 | None:intergenic | 35.0% | |
| ATTTCGTTCGGTAGCAATTT+CGG | + | chr3_4:76434224-76434243 | None:intergenic | 35.0% | |
| ! | GTCTCAAGTTTGATTTCGTT+CGG | + | chr3_4:76434236-76434255 | None:intergenic | 35.0% |
| TCAAACTTGAGACCTTTGAA+AGG | - | chr3_4:76434243-76434262 | Msa0523080:intron | 35.0% | |
| ATTACTTAACCCATTTGGGT+TGG | + | chr3_4:76434304-76434323 | None:intergenic | 35.0% | |
| GAAGATTTATGCACCATTTC+CGG | + | chr3_4:76434351-76434370 | None:intergenic | 35.0% | |
| GGAATTTGAACTTTGTCTCT+TGG | + | chr3_4:76434419-76434438 | None:intergenic | 35.0% | |
| ACAAAGTTCAAATTCCCTCA+GGG | - | chr3_4:76434423-76434442 | Msa0523080:intron | 35.0% | |
| GGGGGAAACTATAAGTAATT+AGG | + | chr3_4:76434815-76434834 | None:intergenic | 35.0% | |
| !! | AACTAGAGGCATTTGTATAG+GGG | + | chr3_4:76434887-76434906 | None:intergenic | 35.0% |
| !! | CAACTAGAGGCATTTGTATA+GGG | + | chr3_4:76434888-76434907 | None:intergenic | 35.0% |
| TTGAGATTCTAGTATGGCAT+TGG | - | chr3_4:76434989-76435008 | Msa0523080:CDS | 35.0% | |
| AAATGAAGAAATTCCACCAC+AGG | + | chr3_4:76435025-76435044 | None:intergenic | 35.0% | |
| ! | TTGGTGTCTCTTCTTATCAT+AGG | - | chr3_4:76435064-76435083 | Msa0523080:intron | 35.0% |
| CTTATCATAGGTCACTAGAA+AGG | - | chr3_4:76435076-76435095 | Msa0523080:intron | 35.0% | |
| ACTAGAAAGGGCTCTTTATT+GGG | - | chr3_4:76435089-76435108 | Msa0523080:intron | 35.0% | |
| TATTGGGTAAAGCTAGCTAT+AGG | - | chr3_4:76435105-76435124 | Msa0523080:intron | 35.0% | |
| ATTGGGTAAAGCTAGCTATA+GGG | - | chr3_4:76435106-76435125 | Msa0523080:intron | 35.0% | |
| GTGAAATAAAATGGCTCCTT+TGG | + | chr3_4:76435261-76435280 | None:intergenic | 35.0% | |
| AAACATTCAGTTCCTCAAGA+AGG | - | chr3_4:76435295-76435314 | Msa0523080:intron | 35.0% | |
| ATATGTGTAAAGACCCACAA+TGG | - | chr3_4:76435533-76435552 | Msa0523080:intron | 35.0% | |
| AGATTAGACTTGGATGTCTT+GGG | - | chr3_4:76435713-76435732 | Msa0523080:intron | 35.0% | |
| ! | TAGTCTAGTTCATCATACTG+CGG | - | chr3_4:76435784-76435803 | Msa0523080:intron | 35.0% |
| TTATCTCATTGGTGAACTGA+TGG | - | chr3_4:76435847-76435866 | Msa0523080:CDS | 35.0% | |
| ! | CAGTTTTCATTTGTATCACC+AGG | - | chr3_4:76435956-76435975 | Msa0523080:intron | 35.0% |
| ! | TCTAAGTTCTAACCTTTCAG+AGG | + | chr3_4:76436204-76436223 | None:intergenic | 35.0% |
| TTTGACAAAAAGGGGAAGAT+TGG | + | chr3_4:76436246-76436265 | None:intergenic | 35.0% | |
| ! | TTCCCCTTTTTGTCAAATCT+TGG | - | chr3_4:76436249-76436268 | Msa0523080:intron | 35.0% |
| AACATCTGTTACCCATTGAT+AGG | - | chr3_4:76436407-76436426 | Msa0523080:intron | 35.0% | |
| AAAATATTTCTCAGGTCACC+AGG | + | chr3_4:76436467-76436486 | None:intergenic | 35.0% | |
| TATACGCTCTGTATAAATGC+AGG | - | chr3_4:76436574-76436593 | Msa0523080:intron | 35.0% | |
| TCTTTGGTCCAGATATTTAG+AGG | - | chr3_4:76436669-76436688 | Msa0523080:intron | 35.0% | |
| TCCAAAACTTCATTCAGGTA+GGG | + | chr3_4:76436765-76436784 | None:intergenic | 35.0% | |
| ATCCAAAACTTCATTCAGGT+AGG | + | chr3_4:76436766-76436785 | None:intergenic | 35.0% | |
| TGTTCATACCATGATTTCCA+AGG | + | chr3_4:76436960-76436979 | None:intergenic | 35.0% | |
| TCATCACATCTAGTATGCTT+AGG | - | chr3_4:76437056-76437075 | Msa0523080:intron | 35.0% | |
| TCATGACATATAGATAGGCA+GGG | + | chr3_4:76437145-76437164 | None:intergenic | 35.0% | |
| ATCATGACATATAGATAGGC+AGG | + | chr3_4:76437146-76437165 | None:intergenic | 35.0% | |
| !! | AATAGCTGCCTTCATTTTTG+TGG | - | chr3_4:76437277-76437296 | Msa0523080:CDS | 35.0% |
| TAGCTCAACCACAAAAATGA+AGG | + | chr3_4:76437288-76437307 | None:intergenic | 35.0% | |
| !! | TTTCTGGCGAAAGCTTTATT+TGG | - | chr3_4:76437384-76437403 | Msa0523080:intron | 35.0% |
| GGAAAACTGTGAGATCATTA+AGG | - | chr3_4:76437556-76437575 | Msa0523080:CDS | 35.0% | |
| ATCTATTGTGTAGAACTCGT+TGG | - | chr3_4:76437661-76437680 | Msa0523080:CDS | 35.0% | |
| !! | CAGCAATTTCTGTTTCTATC+AGG | - | chr3_4:76437916-76437935 | Msa0523080:intron | 35.0% |
| TATAATGTGTCCCTCGTATT+TGG | + | chr3_4:76437965-76437984 | None:intergenic | 35.0% | |
| ATCCATTTCTATCCAGAAAG+AGG | - | chr3_4:76438033-76438052 | Msa0523080:intron | 35.0% | |
| TACCTCTTTCTGGATAGAAA+TGG | + | chr3_4:76438038-76438057 | None:intergenic | 35.0% | |
| AATTTCAATCTTCAAGAGGC+AGG | + | chr3_4:76438143-76438162 | None:intergenic | 35.0% | |
| TTGATTGTATTTGCCGCAAA+TGG | + | chr3_4:76438265-76438284 | None:intergenic | 35.0% | |
| TCAGTTATCATGGATTCTCA+TGG | + | chr3_4:76438577-76438596 | None:intergenic | 35.0% | |
| AACAGGAACATCAGTTATCA+TGG | + | chr3_4:76438587-76438606 | None:intergenic | 35.0% | |
| ATTAGCAAAAGTGAGGAACT+TGG | - | chr3_4:76438953-76438972 | Msa0523080:CDS | 35.0% | |
| AACATTATAGTTGTGGTGGT+TGG | + | chr3_4:76439071-76439090 | None:intergenic | 35.0% | |
| CCAAAACATTATAGTTGTGG+TGG | + | chr3_4:76439075-76439094 | None:intergenic | 35.0% | |
| ! | CCACCACAACTATAATGTTT+TGG | - | chr3_4:76439072-76439091 | Msa0523080:CDS | 35.0% |
| TTGGATATTATGGATGGCTT+AGG | - | chr3_4:76439091-76439110 | Msa0523080:CDS | 35.0% | |
| ACTTGGAGGGATGAACAATT+TGG | - | chr3_4:76433690-76433709 | Msa0523080:CDS | 40.0% | |
| CTTGGAGGGATGAACAATTT+GGG | - | chr3_4:76433691-76433710 | Msa0523080:CDS | 40.0% | |
| TTGGAGGGATGAACAATTTG+GGG | - | chr3_4:76433692-76433711 | Msa0523080:CDS | 40.0% | |
| ! | ATGAACAATTTGGGGTTCTC+TGG | - | chr3_4:76433700-76433719 | Msa0523080:CDS | 40.0% |
| ! | TGAACAATTTGGGGTTCTCT+GGG | - | chr3_4:76433701-76433720 | Msa0523080:CDS | 40.0% |
| AGTGGATAGACCGAATTCAT+CGG | + | chr3_4:76433827-76433846 | None:intergenic | 40.0% | |
| TATCCACTTCCGCTTCAATT+GGG | - | chr3_4:76433839-76433858 | Msa0523080:CDS | 40.0% | |
| !! | CTGTTTTTCCCCAATTGAAG+CGG | + | chr3_4:76433851-76433870 | None:intergenic | 40.0% |
| AAGACTTAAGGACATGGCTA+TGG | - | chr3_4:76433981-76434000 | Msa0523080:CDS | 40.0% | |
| TTTGAGTGAGCTCCTTTCAA+AGG | + | chr3_4:76434258-76434277 | None:intergenic | 40.0% | |
| TTTGAAAGGAGCTCACTCAA+AGG | - | chr3_4:76434257-76434276 | Msa0523080:intron | 40.0% | |
| TTACAAGGTCAAGCTCTTAG+AGG | + | chr3_4:76434394-76434413 | None:intergenic | 40.0% | |
| GACAAAGTTCAAATTCCCTC+AGG | - | chr3_4:76434422-76434441 | Msa0523080:intron | 40.0% | |
| ! | GTAGCACCAGTGTTGTTAAA+TGG | + | chr3_4:76434793-76434812 | None:intergenic | 40.0% |
| GGGCTCACTTATTCATATCA+TGG | + | chr3_4:76434866-76434885 | None:intergenic | 40.0% | |
| !! | ACTAGAGGCATTTGTATAGG+GGG | + | chr3_4:76434886-76434905 | None:intergenic | 40.0% |
| !! | GCAACTAGAGGCATTTGTAT+AGG | + | chr3_4:76434889-76434908 | None:intergenic | 40.0% |
| ATACAAATGCCTCTAGTTGC+TGG | - | chr3_4:76434889-76434908 | Msa0523080:intron | 40.0% | |
| !! | AGTATGGCATTGGCATGTTA+TGG | - | chr3_4:76434999-76435018 | Msa0523080:CDS | 40.0% |
| CACTAGAAAGGGCTCTTTAT+TGG | - | chr3_4:76435088-76435107 | Msa0523080:intron | 40.0% | |
| GTGGAAGTTCTTGATACACT+TGG | - | chr3_4:76435131-76435150 | Msa0523080:intron | 40.0% | |
| GTTCTTGATACACTTGGAAG+TGG | - | chr3_4:76435137-76435156 | Msa0523080:intron | 40.0% | |
| ATGCCAAAGTTAAACACCAG+TGG | - | chr3_4:76435161-76435180 | Msa0523080:intron | 40.0% | |
| CAAAGTTAAACACCAGTGGT+GGG | - | chr3_4:76435165-76435184 | Msa0523080:intron | 40.0% | |
| ! | GTTTTGCTGAGATGGACAAA+AGG | - | chr3_4:76435378-76435397 | Msa0523080:intron | 40.0% |
| TCACGGGAAGTAGTTAGATT+TGG | - | chr3_4:76435508-76435527 | Msa0523080:intron | 40.0% | |
| ACCTACATCGACATTTCTCA+AGG | - | chr3_4:76435560-76435579 | Msa0523080:intron | 40.0% | |
| ACCTTGAGAAATGTCGATGT+AGG | + | chr3_4:76435564-76435583 | None:intergenic | 40.0% | |
| CAGATTAGACTTGGATGTCT+TGG | - | chr3_4:76435712-76435731 | Msa0523080:intron | 40.0% | |
| ! | GAACTCCTGCATTGTCTTTT+CGG | + | chr3_4:76435762-76435781 | None:intergenic | 40.0% |
| TCATACTGCGGTAAGCTTAT+TGG | - | chr3_4:76435796-76435815 | Msa0523080:intron | 40.0% | |
| CATTTATGTTTCCCTGCTTC+TGG | - | chr3_4:76436001-76436020 | Msa0523080:intron | 40.0% | |
| TCCTTGAATCTTCCTCTGAA+AGG | - | chr3_4:76436189-76436208 | Msa0523080:intron | 40.0% | |
| ACCTTTCAGAGGAAGATTCA+AGG | + | chr3_4:76436193-76436212 | None:intergenic | 40.0% | |
| TTGGTCCAGATATTTAGAGG+AGG | - | chr3_4:76436672-76436691 | Msa0523080:intron | 40.0% | |
| CCAAAACTTCATTCAGGTAG+GGG | + | chr3_4:76436764-76436783 | None:intergenic | 40.0% | |
| GTTGTTACAGTCTTCTTCCA+TGG | - | chr3_4:76437452-76437471 | Msa0523080:CDS | 40.0% | |
| ATTGTGTAGAACTCGTTGGA+AGG | - | chr3_4:76437665-76437684 | Msa0523080:CDS | 40.0% | |
| ! | TGAAATTGTGGGTTAATGGC+AGG | - | chr3_4:76437733-76437752 | Msa0523080:intron | 40.0% |
| ! | GGTGCTGTCAAGTATACTAA+AGG | - | chr3_4:76437760-76437779 | Msa0523080:intron | 40.0% |
| ACTAAAGGTCCTCAAAGACT+AGG | - | chr3_4:76437775-76437794 | Msa0523080:intron | 40.0% | |
| ACGAGGGACACATTATATCA+AGG | - | chr3_4:76437968-76437987 | Msa0523080:intron | 40.0% | |
| ! | AGGGCACTCTTAATACTGTT+TGG | + | chr3_4:76437998-76438017 | None:intergenic | 40.0% |
| CAAATGGATGTCCAGGAAAA+GGG | + | chr3_4:76438067-76438086 | None:intergenic | 40.0% | |
| ACAAATGGATGTCCAGGAAA+AGG | + | chr3_4:76438068-76438087 | None:intergenic | 40.0% | |
| CTCCTTCACTCATATCAAAG+CGG | - | chr3_4:76438210-76438229 | Msa0523080:intron | 40.0% | |
| TTCCGCTTTGATATGAGTGA+AGG | + | chr3_4:76438215-76438234 | None:intergenic | 40.0% | |
| ! | GATTTTTGTCCATACCTGTC+AGG | - | chr3_4:76438308-76438327 | Msa0523080:intron | 40.0% |
| !!! | ATTTTTTTTTCTCCCCGTGC+TGG | - | chr3_4:76438339-76438358 | Msa0523080:intron | 40.0% |
| ATTGTTAACAGGGCTCATCA+AGG | - | chr3_4:76438429-76438448 | Msa0523080:intron | 40.0% | |
| AAATAACAAGTGGAGTCAGC+AGG | - | chr3_4:76438549-76438568 | Msa0523080:intron | 40.0% | |
| CGTTACTGCAATGTCAAAAC+AGG | + | chr3_4:76438604-76438623 | None:intergenic | 40.0% | |
| TGACATTGCAGTAACGACTT+TGG | - | chr3_4:76438608-76438627 | Msa0523080:intron | 40.0% | |
| ! | CTGAACTTCAGTCTAAGATG+CGG | - | chr3_4:76438819-76438838 | Msa0523080:intron | 40.0% |
| AGACAGAAACAACAAGCCAT+TGG | - | chr3_4:76438862-76438881 | Msa0523080:intron | 40.0% | |
| GACAGAAACAACAAGCCATT+GGG | - | chr3_4:76438863-76438882 | Msa0523080:intron | 40.0% | |
| CTCAACTTTCTCCAGAAGAT+AGG | - | chr3_4:76438888-76438907 | Msa0523080:intron | 40.0% | |
| TAGAGGAGGTAATTTCAAGG+AGG | - | chr3_4:76438918-76438937 | Msa0523080:intron | 40.0% | |
| !! | TCCTCACTTTTGCTAATTCC+CGG | + | chr3_4:76438950-76438969 | None:intergenic | 40.0% |
| TTCACCTGATAAGGAGTTCT+TGG | - | chr3_4:76439030-76439049 | Msa0523080:CDS | 40.0% | |
| TCACCTGATAAGGAGTTCTT+GGG | - | chr3_4:76439031-76439050 | Msa0523080:CDS | 40.0% | |
| GCTGAGAATTTACGACTCTG+AGG | + | chr3_4:76433506-76433525 | None:intergenic | 45.0% | |
| GAGAGCAATGCAGAAGAACT+TGG | - | chr3_4:76433673-76433692 | Msa0523080:CDS | 45.0% | |
| AGCAATGCAGAAGAACTTGG+AGG | - | chr3_4:76433676-76433695 | Msa0523080:CDS | 45.0% | |
| GCAATGCAGAAGAACTTGGA+GGG | - | chr3_4:76433677-76433696 | Msa0523080:CDS | 45.0% | |
| ! | CTCTGGGAAGGTTCTTAAGA+AGG | - | chr3_4:76433717-76433736 | Msa0523080:CDS | 45.0% |
| CTATCCACTTCCGCTTCAAT+TGG | - | chr3_4:76433838-76433857 | Msa0523080:CDS | 45.0% | |
| ATCCACTTCCGCTTCAATTG+GGG | - | chr3_4:76433840-76433859 | Msa0523080:CDS | 45.0% | |
| CGCTTCAATTGGGGAAAAAC+AGG | - | chr3_4:76433849-76433868 | Msa0523080:CDS | 45.0% | |
| !!! | ATATTTTGAGGTCTCCGCAG+CGG | + | chr3_4:76434028-76434047 | None:intergenic | 45.0% |
| TTTAAATGACGCCCCACAAG+TGG | + | chr3_4:76434170-76434189 | None:intergenic | 45.0% | |
| AGCTAGATCAAAGCTCTCGA+TGG | - | chr3_4:76434189-76434208 | Msa0523080:intron | 45.0% | |
| GGTCTCAAGCTAACATCAGT+AGG | - | chr3_4:76434278-76434297 | Msa0523080:intron | 45.0% | |
| ATCAGTAGGCCAACCCAAAT+GGG | - | chr3_4:76434292-76434311 | Msa0523080:intron | 45.0% | |
| CTTTGTCTCTTGGGGTTACA+AGG | + | chr3_4:76434409-76434428 | None:intergenic | 45.0% | |
| ! | GTATCACTCAGTGCTGTTGA+AGG | - | chr3_4:76434625-76434644 | Msa0523080:intron | 45.0% |
| GCCATATGAACTAGCCATTG+CGG | - | chr3_4:76434681-76434700 | Msa0523080:intron | 45.0% | |
| CCTTCACAAGTTGTCTATCG+CGG | - | chr3_4:76434730-76434749 | Msa0523080:intron | 45.0% | |
| TTGTTAAATGGAGGCCATGG+TGG | + | chr3_4:76434781-76434800 | None:intergenic | 45.0% | |
| ! | GTGTTGTTAAATGGAGGCCA+TGG | + | chr3_4:76434784-76434803 | None:intergenic | 45.0% |
| TGGCCTCCATTTAACAACAC+TGG | - | chr3_4:76434784-76434803 | Msa0523080:CDS | 45.0% | |
| ! | GCACCAGTGTTGTTAAATGG+AGG | + | chr3_4:76434790-76434809 | None:intergenic | 45.0% |
| ! | CCACCACTGGTGTTTAACTT+TGG | + | chr3_4:76435167-76435186 | None:intergenic | 45.0% |
| CCAAAGTTAAACACCAGTGG+TGG | - | chr3_4:76435164-76435183 | Msa0523080:intron | 45.0% | |
| CATTCAGTTCCTCAAGAAGG+AGG | - | chr3_4:76435298-76435317 | Msa0523080:intron | 45.0% | |
| CTGAGATGGACAAAAGGTTC+TGG | - | chr3_4:76435384-76435403 | Msa0523080:intron | 45.0% | |
| ! | GATGTAGGTTGTGCCATTGT+GGG | + | chr3_4:76435549-76435568 | None:intergenic | 45.0% |
| AGATGCCGAAAAGACAATGC+AGG | - | chr3_4:76435754-76435773 | Msa0523080:intron | 45.0% | |
| CTCATAGCAAACCAGAAGCA+GGG | + | chr3_4:76436015-76436034 | None:intergenic | 45.0% | |
| ACTCATAGCAAACCAGAAGC+AGG | + | chr3_4:76436016-76436035 | None:intergenic | 45.0% | |
| CTGTCTTACAGTCTATCAGC+AGG | - | chr3_4:76436505-76436524 | Msa0523080:intron | 45.0% | |
| TCATTCAGGTAGGGGAACAT+GGG | + | chr3_4:76436756-76436775 | None:intergenic | 45.0% | |
| TTCATTCAGGTAGGGGAACA+TGG | + | chr3_4:76436757-76436776 | None:intergenic | 45.0% | |
| ! | CCCCTACCTGAATGAAGTTT+TGG | - | chr3_4:76436761-76436780 | Msa0523080:intron | 45.0% |
| GTAGCCGTGTGTATATCTTG+CGG | - | chr3_4:76436792-76436811 | Msa0523080:intron | 45.0% | |
| CAAGCAATTCGTGAGTTCCT+TGG | - | chr3_4:76436940-76436959 | Msa0523080:intron | 45.0% | |
| CGTGAGTTCCTTGGAAATCA+TGG | - | chr3_4:76436949-76436968 | Msa0523080:intron | 45.0% | |
| AATGTGTCCCTCGTATTTGG+AGG | + | chr3_4:76437962-76437981 | None:intergenic | 45.0% | |
| !! | TTAAGAGTGCCCTTCCATCT+CGG | - | chr3_4:76438005-76438024 | Msa0523080:intron | 45.0% |
| !! | GAAATGGATTGCAACCGAGA+TGG | + | chr3_4:76438022-76438041 | None:intergenic | 45.0% |
| AGGGAGGTTATACCTCTTTC+TGG | + | chr3_4:76438048-76438067 | None:intergenic | 45.0% | |
| ! | AGGTATAACCTCCCTTTTCC+TGG | - | chr3_4:76438053-76438072 | Msa0523080:intron | 45.0% |
| TGCAAGACAAATGGATGTCC+AGG | + | chr3_4:76438074-76438093 | None:intergenic | 45.0% | |
| TAAGAAAACAAGGCCAGCAC+GGG | + | chr3_4:76438355-76438374 | None:intergenic | 45.0% | |
| CTAAGAAAACAAGGCCAGCA+CGG | + | chr3_4:76438356-76438375 | None:intergenic | 45.0% | |
| ATAACGCGTGAGCAATTGCA+GGG | + | chr3_4:76438393-76438412 | None:intergenic | 45.0% | |
| AATAACGCGTGAGCAATTGC+AGG | + | chr3_4:76438394-76438413 | None:intergenic | 45.0% | |
| !! | CTTTGGATGGGTTGGTGAAT+GGG | - | chr3_4:76438452-76438471 | Msa0523080:intron | 45.0% |
| TTGGTGAATGGGCAAACACA+AGG | - | chr3_4:76438463-76438482 | Msa0523080:intron | 45.0% | |
| ! | GCGAATTGGGTTGCTTTCTT+TGG | + | chr3_4:76438645-76438664 | None:intergenic | 45.0% |
| ! | AAAGTGTCTGGAGGCGAATT+GGG | + | chr3_4:76438658-76438677 | None:intergenic | 45.0% |
| ! | TAAAGTGTCTGGAGGCGAAT+TGG | + | chr3_4:76438659-76438678 | None:intergenic | 45.0% |
| ! | TATCGGCGTAGTAAAGTGTC+TGG | + | chr3_4:76438670-76438689 | None:intergenic | 45.0% |
| TGAAGTTCAGGTCTCTTGGA+AGG | + | chr3_4:76438809-76438828 | None:intergenic | 45.0% | |
| AGACTGAAGTTCAGGTCTCT+TGG | + | chr3_4:76438813-76438832 | None:intergenic | 45.0% | |
| CGCATCTTAGACTGAAGTTC+AGG | + | chr3_4:76438821-76438840 | None:intergenic | 45.0% | |
| GGAGAAAGTTGAGTTCCCAA+TGG | + | chr3_4:76438881-76438900 | None:intergenic | 45.0% | |
| AGGAGGTAATTTCAAGGAGG+AGG | - | chr3_4:76438921-76438940 | Msa0523080:CDS | 45.0% | |
| !! | CCTCACTTTTGCTAATTCCC+GGG | + | chr3_4:76438949-76438968 | None:intergenic | 45.0% |
| !!! | CAGCACTTTTGGTCTTGAGA+GGG | + | chr3_4:76439006-76439025 | None:intergenic | 45.0% |
| !! | CTCTCAAGACCAAAAGTGCT+GGG | - | chr3_4:76439005-76439024 | Msa0523080:CDS | 45.0% |
| GTACCCAAGAACTCCTTATC+AGG | + | chr3_4:76439037-76439056 | None:intergenic | 45.0% | |
| AATGGGAGCTGTTTGTTCGG+CGG | - | chr3_4:76433642-76433661 | Msa0523080:three_prime_UTR | 50.0% | |
| ! | CAATTTGGGGTTCTCTGGGA+AGG | - | chr3_4:76433705-76433724 | Msa0523080:CDS | 50.0% |
| TTCCCCAATTGAAGCGGAAG+TGG | + | chr3_4:76433845-76433864 | None:intergenic | 50.0% | |
| TCGTTCGGTAGCAATTTCGG+TGG | + | chr3_4:76434221-76434240 | None:intergenic | 50.0% | |
| CATCAGTAGGCCAACCCAAA+TGG | - | chr3_4:76434291-76434310 | Msa0523080:intron | 50.0% | |
| CTGGTCTAGTCGTTCTGTGT+TGG | - | chr3_4:76434486-76434505 | Msa0523080:intron | 50.0% | |
| ! | TCGTTCTGTGTTGGCCGATA+TGG | - | chr3_4:76434495-76434514 | Msa0523080:intron | 50.0% |
| CTAAAGCTCCCGCATAAGCA+GGG | + | chr3_4:76434578-76434597 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATAAGC+AGG | + | chr3_4:76434579-76434598 | None:intergenic | 50.0% | |
| ! | ATGCGGGAGCTTTAGTGCAA+TGG | - | chr3_4:76434583-76434602 | Msa0523080:intron | 50.0% |
| ! | GCCGCAATGGCTAGTTCATA+TGG | + | chr3_4:76434685-76434704 | None:intergenic | 50.0% |
| CCGCGATAGACAACTTGTGA+AGG | + | chr3_4:76434733-76434752 | None:intergenic | 50.0% | |
| TACCCCATGACATTCCACCA+TGG | - | chr3_4:76434764-76434783 | Msa0523080:CDS | 50.0% | |
| ! | AGGCCATGGTGGAATGTCAT+GGG | + | chr3_4:76434770-76434789 | None:intergenic | 50.0% |
| AGCAGTAAGCCAGCAACTAG+AGG | + | chr3_4:76434901-76434920 | None:intergenic | 50.0% | |
| CATTGGCATGTTATGGCCTG+TGG | - | chr3_4:76435006-76435025 | Msa0523080:CDS | 50.0% | |
| GGGTAAAGCTAGCTATAGGG+CGG | - | chr3_4:76435109-76435128 | Msa0523080:intron | 50.0% | |
| TAAAGCTAGCTATAGGGCGG+TGG | - | chr3_4:76435112-76435131 | Msa0523080:intron | 50.0% | |
| TCTCTGGCAAGCTTTCCAGA+GGG | - | chr3_4:76435192-76435211 | Msa0523080:intron | 50.0% | |
| ! | CGATGTAGGTTGTGCCATTG+TGG | + | chr3_4:76435550-76435569 | None:intergenic | 50.0% |
| GCAGCCGCAAGATATACACA+CGG | + | chr3_4:76436799-76436818 | None:intergenic | 50.0% | |
| AGAAGGAATGTGGGCAACAG+AGG | + | chr3_4:76437099-76437118 | None:intergenic | 50.0% | |
| ! | TGTGGGTTAATGGCAGGTAC+TGG | - | chr3_4:76437739-76437758 | Msa0523080:intron | 50.0% |
| ! | CCAGCTTCACCTAGTCTTTG+AGG | + | chr3_4:76437787-76437806 | None:intergenic | 50.0% |
| CCTCAAAGACTAGGTGAAGC+TGG | - | chr3_4:76437784-76437803 | Msa0523080:intron | 50.0% | |
| TATTTGGAGGAAGGGAGGCT+GGG | + | chr3_4:76437949-76437968 | None:intergenic | 50.0% | |
| CTCCCTTCCTCCAAATACGA+GGG | - | chr3_4:76437952-76437971 | Msa0523080:intron | 50.0% | |
| GTCCCTCGTATTTGGAGGAA+GGG | + | chr3_4:76437957-76437976 | None:intergenic | 50.0% | |
| TGTCCCTCGTATTTGGAGGA+AGG | + | chr3_4:76437958-76437977 | None:intergenic | 50.0% | |
| GGATTGCAACCGAGATGGAA+GGG | + | chr3_4:76438017-76438036 | None:intergenic | 50.0% | |
| TGGATTGCAACCGAGATGGA+AGG | + | chr3_4:76438018-76438037 | None:intergenic | 50.0% | |
| ATGGATGTCCAGGAAAAGGG+AGG | + | chr3_4:76438064-76438083 | None:intergenic | 50.0% | |
| TCAGTGGCTCGTACCATTTG+CGG | - | chr3_4:76438249-76438268 | Msa0523080:intron | 50.0% | |
| AAGAAAACAAGGCCAGCACG+GGG | + | chr3_4:76438354-76438373 | None:intergenic | 50.0% | |
| !!! | GCTGGCCTTGTTTTCTTAGC+TGG | - | chr3_4:76438357-76438376 | Msa0523080:intron | 50.0% |
| AACAGGGCTCATCAAGGCTT+TGG | - | chr3_4:76438435-76438454 | Msa0523080:intron | 50.0% | |
| !! | GGCTCATCAAGGCTTTGGAT+GGG | - | chr3_4:76438440-76438459 | Msa0523080:intron | 50.0% |
| !! | CATCAAGGCTTTGGATGGGT+TGG | - | chr3_4:76438444-76438463 | Msa0523080:intron | 50.0% |
| !! | GCTTTGGATGGGTTGGTGAA+TGG | - | chr3_4:76438451-76438470 | Msa0523080:intron | 50.0% |
| GATCCAGACAAAATGCCTCG+AGG | - | chr3_4:76438756-76438775 | Msa0523080:intron | 50.0% | |
| ACAAAATGCCTCGAGGCCAA+TGG | - | chr3_4:76438763-76438782 | Msa0523080:intron | 50.0% | |
| AGTTCAGGTCTCTTGGAAGG+AGG | + | chr3_4:76438806-76438825 | None:intergenic | 50.0% | |
| AATTTCAAGGAGGAGGAGCC+CGG | - | chr3_4:76438928-76438947 | Msa0523080:CDS | 50.0% | |
| CCCGGGAATTAGCAAAAGTG+AGG | - | chr3_4:76438946-76438965 | Msa0523080:CDS | 50.0% | |
| CTGCCAAGAAAACTCATGCC+AGG | - | chr3_4:76438978-76438997 | Msa0523080:CDS | 50.0% | |
| ! | GTGCCTGGCATGAGTTTTCT+TGG | + | chr3_4:76438984-76439003 | None:intergenic | 50.0% |
| !!! | CCAGCACTTTTGGTCTTGAG+AGG | + | chr3_4:76439007-76439026 | None:intergenic | 50.0% |
| ! | CCTCTCAAGACCAAAAGTGC+TGG | - | chr3_4:76439004-76439023 | Msa0523080:CDS | 50.0% |
| ! | AGGTGAACTCCCAGCACTTT+TGG | + | chr3_4:76439017-76439036 | None:intergenic | 50.0% |
| TGCTGGGAGTTCACCTGATA+AGG | - | chr3_4:76439021-76439040 | Msa0523080:CDS | 50.0% | |
| ATGGGAGCTGTTTGTTCGGC+GGG | - | chr3_4:76433643-76433662 | Msa0523080:three_prime_UTR | 55.0% | |
| !! | GACGGTGGGATCGGATTAGT+CGG | + | chr3_4:76434148-76434167 | None:intergenic | 55.0% |
| AATGACGCCCCACAAGTGGA+CGG | + | chr3_4:76434166-76434185 | None:intergenic | 55.0% | |
| ! | GGCCATGGTGGAATGTCATG+GGG | + | chr3_4:76434769-76434788 | None:intergenic | 55.0% |
| ! | GAGGCCATGGTGGAATGTCA+TGG | + | chr3_4:76434771-76434790 | None:intergenic | 55.0% |
| TGGCATGTTATGGCCTGTGG+TGG | - | chr3_4:76435009-76435028 | Msa0523080:CDS | 55.0% | |
| !! | ACCAGTGGTGGGTTTGTCTC+TGG | - | chr3_4:76435176-76435195 | Msa0523080:intron | 55.0% |
| GTCTCTGGCAAGCTTTCCAG+AGG | - | chr3_4:76435191-76435210 | Msa0523080:intron | 55.0% | |
| CAGGTAGGGGAACATGGGAA+GGG | + | chr3_4:76436751-76436770 | None:intergenic | 55.0% | |
| TCAGGTAGGGGAACATGGGA+AGG | + | chr3_4:76436752-76436771 | None:intergenic | 55.0% | |
| GGAATGTGGGCAACAGAGGT+AGG | + | chr3_4:76437095-76437114 | None:intergenic | 55.0% | |
| GTATTTGGAGGAAGGGAGGC+TGG | + | chr3_4:76437950-76437969 | None:intergenic | 55.0% | |
| CCTCGTATTTGGAGGAAGGG+AGG | + | chr3_4:76437954-76437973 | None:intergenic | 55.0% | |
| CCTCCCTTCCTCCAAATACG+AGG | - | chr3_4:76437951-76437970 | Msa0523080:intron | 55.0% | |
| !! | GGGCTCATCAAGGCTTTGGA+TGG | - | chr3_4:76438439-76438458 | Msa0523080:intron | 55.0% |
| ! | CGGCGTAGTAAAGTGTCTGG+AGG | + | chr3_4:76438667-76438686 | None:intergenic | 55.0% |
| !! | TGGCCTCGAGGCATTTTGTC+TGG | + | chr3_4:76438762-76438781 | None:intergenic | 55.0% |
| TTGGAAGGAGGAGACCGTGT+GGG | + | chr3_4:76438794-76438813 | None:intergenic | 55.0% | |
| ATTTCAAGGAGGAGGAGCCC+GGG | - | chr3_4:76438929-76438948 | Msa0523080:CDS | 55.0% | |
| !! | TTTGGTCTTGAGAGGGTGCC+TGG | + | chr3_4:76438999-76439018 | None:intergenic | 55.0% |
| TGGGAGCTGTTTGTTCGGCG+GGG | - | chr3_4:76433644-76433663 | Msa0523080:three_prime_UTR | 60.0% | |
| AGCTGTTTGTTCGGCGGGGA+TGG | - | chr3_4:76433648-76433667 | Msa0523080:three_prime_UTR | 60.0% | |
| GCTGTTTGTTCGGCGGGGAT+GGG | - | chr3_4:76433649-76433668 | Msa0523080:three_prime_UTR | 60.0% | |
| CTGTTTGTTCGGCGGGGATG+GGG | - | chr3_4:76433650-76433669 | Msa0523080:exon | 60.0% | |
| TGTTTGTTCGGCGGGGATGG+GGG | - | chr3_4:76433651-76433670 | Msa0523080:exon | 60.0% | |
| TTGCGGTCTTGATGCCGCTG+CGG | - | chr3_4:76434011-76434030 | Msa0523080:CDS | 60.0% | |
| CCACAAGTGGACGGTGGGAT+CGG | + | chr3_4:76434157-76434176 | None:intergenic | 60.0% | |
| CGATCCCACCGTCCACTTGT+GGG | - | chr3_4:76434155-76434174 | Msa0523080:intron | 60.0% | |
| GATCCCACCGTCCACTTGTG+GGG | - | chr3_4:76434156-76434175 | Msa0523080:intron | 60.0% | |
| ACTTTGCTGGGACCCCTTCC+CGG | - | chr3_4:76434551-76434570 | Msa0523080:CDS | 60.0% | |
| CATAAGCAGGGTCCGGGAAG+GGG | + | chr3_4:76434566-76434585 | None:intergenic | 60.0% | |
| GCATAAGCAGGGTCCGGGAA+GGG | + | chr3_4:76434567-76434586 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCTTATG+CGG | - | chr3_4:76434566-76434585 | Msa0523080:intron | 60.0% | |
| TTCCCGGACCCTGCTTATGC+GGG | - | chr3_4:76434567-76434586 | Msa0523080:intron | 60.0% | |
| GAACTAGCCATTGCGGCCCA+TGG | - | chr3_4:76434688-76434707 | Msa0523080:intron | 60.0% | |
| TGAAGGAACGCCCGCCATTG+TGG | + | chr3_4:76434716-76434735 | None:intergenic | 60.0% | |
| GCCAGAGACAAACCCACCAC+TGG | + | chr3_4:76435180-76435199 | None:intergenic | 60.0% | |
| GGCCAATGGCAATGCCCACA+CGG | - | chr3_4:76438777-76438796 | Msa0523080:intron | 60.0% | |
| ! | GACCGTGTGGGCATTGCCAT+TGG | + | chr3_4:76438782-76438801 | None:intergenic | 60.0% |
| CTTGGAAGGAGGAGACCGTG+TGG | + | chr3_4:76438795-76438814 | None:intergenic | 60.0% | |
| GTGGTGGTTGGCGATGAGTG+TGG | + | chr3_4:76439059-76439078 | None:intergenic | 60.0% | |
| CCGATCCCACCGTCCACTTG+TGG | - | chr3_4:76434154-76434173 | Msa0523080:intron | 65.0% | |
| ACGCCCCACAAGTGGACGGT+GGG | + | chr3_4:76434162-76434181 | None:intergenic | 65.0% | |
| GGGAAGGGGTCCCAGCAAAG+TGG | + | chr3_4:76434552-76434571 | None:intergenic | 65.0% | |
| CGCATAAGCAGGGTCCGGGA+AGG | + | chr3_4:76434568-76434587 | None:intergenic | 65.0% | |
| CTCCCGCATAAGCAGGGTCC+GGG | + | chr3_4:76434572-76434591 | None:intergenic | 65.0% | |
| GCTCCCGCATAAGCAGGGTC+CGG | + | chr3_4:76434573-76434592 | None:intergenic | 65.0% | |
| !! | TGTGGTGCCATGGGCCGCAA+TGG | + | chr3_4:76434698-76434717 | None:intergenic | 65.0% |
| TGCGGCCCATGGCACCACAA+TGG | - | chr3_4:76434699-76434718 | Msa0523080:intron | 65.0% | |
| GGCCCATGGCACCACAATGG+CGG | - | chr3_4:76434702-76434721 | Msa0523080:intron | 65.0% | |
| GCCCATGGCACCACAATGGC+GGG | - | chr3_4:76434703-76434722 | Msa0523080:intron | 65.0% | |
| !! | GCCCGCCATTGTGGTGCCAT+GGG | + | chr3_4:76434707-76434726 | None:intergenic | 65.0% |
| ! | GGGCATTGCCATTGGCCTCG+AGG | + | chr3_4:76438774-76438793 | None:intergenic | 65.0% |
| GACGCCCCACAAGTGGACGG+TGG | + | chr3_4:76434163-76434182 | None:intergenic | 70.0% | |
| ! | CGCCCGCCATTGTGGTGCCA+TGG | + | chr3_4:76434708-76434727 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 76433493 | 76439296 | 76433493 | ID=Msa0523080;Name=Msa0523080 |
| chr3_4 | mRNA | 76433493 | 76439296 | 76433493 | ID=Msa0523080-mRNA-1;Parent=Msa0523080;Name=Msa0523080-mRNA-1;_AED=0.11;_eAED=0.11;_QI=150|1|1|1|1|1|12|176|608 |
| chr3_4 | exon | 76433493 | 76434170 | 76433493 | ID=Msa0523080-mRNA-1:exon:22183;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76434305 | 76434349 | 76434305 | ID=Msa0523080-mRNA-1:exon:22182;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76434505 | 76434581 | 76434505 | ID=Msa0523080-mRNA-1:exon:22181;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76434735 | 76434851 | 76434735 | ID=Msa0523080-mRNA-1:exon:22180;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76434937 | 76435034 | 76434937 | ID=Msa0523080-mRNA-1:exon:22179;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76435819 | 76435888 | 76435819 | ID=Msa0523080-mRNA-1:exon:22178;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76436096 | 76436193 | 76436096 | ID=Msa0523080-mRNA-1:exon:22177;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76436579 | 76436672 | 76436579 | ID=Msa0523080-mRNA-1:exon:22176;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76436984 | 76437074 | 76436984 | ID=Msa0523080-mRNA-1:exon:22175;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76437208 | 76437300 | 76437208 | ID=Msa0523080-mRNA-1:exon:22174;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76437390 | 76437703 | 76437390 | ID=Msa0523080-mRNA-1:exon:22173;Parent=Msa0523080-mRNA-1 |
| chr3_4 | exon | 76438919 | 76439296 | 76438919 | ID=Msa0523080-mRNA-1:exon:22172;Parent=Msa0523080-mRNA-1 |
| chr3_4 | five_prime_UTR | 76439147 | 76439296 | 76439147 | ID=Msa0523080-mRNA-1:five_prime_utr;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76438919 | 76439146 | 76438919 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76437390 | 76437703 | 76437390 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76437208 | 76437300 | 76437208 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76436984 | 76437074 | 76436984 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76436579 | 76436672 | 76436579 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76436096 | 76436193 | 76436096 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76435819 | 76435888 | 76435819 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76434937 | 76435034 | 76434937 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76434735 | 76434851 | 76434735 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76434505 | 76434581 | 76434505 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76434305 | 76434349 | 76434305 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | CDS | 76433669 | 76434170 | 76433669 | ID=Msa0523080-mRNA-1:cds;Parent=Msa0523080-mRNA-1 |
| chr3_4 | three_prime_UTR | 76433493 | 76433668 | 76433493 | ID=Msa0523080-mRNA-1:three_prime_utr;Parent=Msa0523080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
