AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1263500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263500 MtrunA17_Chr4g0075201 91.633 502 27 7 1 497 7 498 0.0 821
Msa1263500 MtrunA17_Chr2g0288871 54.921 508 157 21 15 478 53 532 4.19e-136 404
Msa1263500 MtrunA17_Chr2g0322391 49.042 522 192 17 28 492 81 585 5.09e-126 380
Msa1263500 MtrunA17_Chr3g0099641 41.253 463 205 12 28 475 34 444 1.58e-100 310
Msa1263500 MtrunA17_Chr7g0270831 39.112 473 190 15 35 486 17 412 1.17e-78 252
Msa1263500 MtrunA17_Chr5g0419241 97.196 107 3 0 190 296 1 107 2.44e-72 224
Msa1263500 MtrunA17_Chr4g0025061 51.406 249 102 4 240 483 334 568 1.59e-69 233
Msa1263500 MtrunA17_Chr4g0024391 55.042 238 98 4 244 476 207 440 5.93e-69 228
Msa1263500 MtrunA17_Chr4g0025051 56.846 241 101 3 244 482 313 552 1.84e-68 230
Msa1263500 MtrunA17_Chr2g0302391 33.854 384 215 10 116 491 66 418 6.27e-52 182
Msa1263500 MtrunA17_Chr7g0216891 31.303 476 196 17 109 476 31 483 4.45e-46 169
Msa1263500 MtrunA17_Chr4g0051181 84.416 77 12 0 250 326 227 303 4.56e-42 156
Msa1263500 MtrunA17_Chr4g0060271 36.765 340 163 8 99 387 51 389 6.44e-41 155
Msa1263500 MtrunA17_Chr4g0001361 33.190 232 97 8 241 472 137 310 9.44e-29 115
Msa1263500 MtrunA17_Chr1g0150271 51.220 82 40 0 261 342 96 177 1.45e-25 105
Msa1263500 MtrunA17_Chr3g0079691 48.039 102 52 1 227 328 456 556 1.90e-24 107
Msa1263500 MtrunA17_Chr3g0079691 41.935 93 52 2 235 327 249 339 1.38e-14 76.6
Msa1263500 MtrunA17_Chr3g0101131 43.182 132 60 4 249 366 398 528 4.10e-24 105
Msa1263500 MtrunA17_Chr3g0101131 49.180 61 29 2 266 326 243 301 1.03e-11 67.4
Msa1263500 MtrunA17_Chr3g0106491 54.430 79 35 1 248 326 347 424 4.64e-24 105
Msa1263500 MtrunA17_Chr3g0106491 38.298 94 52 3 235 328 171 258 5.20e-13 71.2
Msa1263500 MtrunA17_Chr5g0445311 55.000 80 35 1 249 328 347 425 5.71e-24 105
Msa1263500 MtrunA17_Chr5g0445311 50.820 61 28 2 266 326 200 258 2.52e-12 69.3
Msa1263500 MtrunA17_Chr2g0333851 26.902 368 158 14 107 472 51 309 6.08e-24 102
Msa1263500 MtrunA17_Chr3g0136961 32.444 225 90 5 251 475 123 285 8.83e-24 101
Msa1263500 MtrunA17_Chr7g0243891 42.029 138 63 4 243 377 351 474 1.29e-23 103
Msa1263500 MtrunA17_Chr7g0243891 46.575 73 32 3 254 326 209 274 1.55e-11 66.6
Msa1263500 MtrunA17_Chr1g0150281 31.557 244 129 8 98 340 8 214 1.94e-23 100
Msa1263500 MtrunA17_Chr5g0447701 44.643 112 59 3 233 343 218 327 4.04e-23 101
Msa1263500 MtrunA17_Chr4g0004911 53.165 79 36 1 248 326 318 395 4.08e-23 102
Msa1263500 MtrunA17_Chr4g0004911 41.333 75 41 2 252 326 172 243 1.55e-13 72.8
Msa1263500 MtrunA17_Chr5g0432161 52.381 84 39 1 245 328 400 482 4.09e-23 102
Msa1263500 MtrunA17_Chr5g0432161 43.590 78 42 2 266 343 244 319 3.51e-13 72.0
Msa1263500 MtrunA17_Chr2g0294231 50.000 82 40 1 250 331 187 267 4.14e-23 100
Msa1263500 MtrunA17_Chr1g0150801 52.703 74 34 1 251 324 87 159 5.46e-23 95.5
Msa1263500 MtrunA17_Chr7g0218081 51.190 84 40 1 245 328 389 471 6.72e-23 101
Msa1263500 MtrunA17_Chr7g0218081 52.459 61 27 2 266 326 228 286 8.23e-13 70.5
Msa1263500 MtrunA17_Chr7g0270191 46.316 95 46 2 250 344 129 218 8.58e-23 98.6
Msa1263500 MtrunA17_Chr7g0224801 52.113 71 33 1 255 325 82 151 2.28e-22 94.0
Msa1263500 MtrunA17_Chr5g0418191 50.617 81 39 1 248 328 302 381 5.92e-22 98.2
Msa1263500 MtrunA17_Chr5g0418191 37.615 109 64 3 266 374 151 255 1.08e-12 70.1
Msa1263500 MtrunA17_Chr7g0249311 51.250 80 38 1 249 328 375 453 1.04e-21 98.6
Msa1263500 MtrunA17_Chr7g0249311 48.333 60 29 2 267 326 180 237 5.69e-11 65.1
Msa1263500 MtrunA17_Chr7g0249301 51.250 80 38 1 249 328 275 353 1.54e-21 96.3
Msa1263500 MtrunA17_Chr7g0249301 46.154 65 33 2 262 326 58 120 5.07e-11 64.3
Msa1263500 MtrunA17_Chr4g0042831 46.316 95 44 2 234 328 252 339 1.86e-21 96.3
Msa1263500 MtrunA17_Chr1g0194481 51.948 77 36 1 250 326 142 217 2.49e-21 94.7
Msa1263500 MtrunA17_Chr8g0386241 44.444 81 44 1 249 329 86 165 7.29e-21 90.1
Msa1263500 MtrunA17_Chr4g0051881 44.554 101 49 2 253 347 165 264 1.04e-20 93.2
Msa1263500 MtrunA17_Chr4g0068541 50.649 77 37 1 250 326 192 267 2.50e-20 93.2
Msa1263500 MtrunA17_Chr5g0418781 47.561 82 42 1 242 323 100 180 5.17e-20 90.1
Msa1263500 MtrunA17_Chr7g0263531 41.489 94 54 1 233 326 328 420 5.48e-20 92.4
Msa1263500 MtrunA17_Chr7g0263531 50.000 60 28 2 267 326 190 247 1.11e-11 66.6
Msa1263500 MtrunA17_Chr8g0383251 45.946 74 39 1 253 326 95 167 1.29e-19 86.7
Msa1263500 MtrunA17_Chr7g0270051 52.703 74 32 1 266 339 53 123 2.49e-19 87.8
Msa1263500 MtrunA17_Chr4g0074001 50.633 79 36 2 250 326 343 420 2.75e-19 90.9
Msa1263500 MtrunA17_Chr5g0443131 50.000 74 36 1 253 326 144 216 1.21e-18 86.7
Msa1263500 MtrunA17_Chr7g0248721 46.341 82 42 2 243 324 118 197 1.51e-18 84.3
Msa1263500 MtrunA17_Chr3g0129361 48.000 75 38 1 249 323 127 200 1.52e-18 84.3
Msa1263500 MtrunA17_Chr1g0147881 48.649 74 38 0 250 323 246 319 1.79e-18 86.7
Msa1263500 MtrunA17_Chr8g0335811 43.902 82 45 1 242 323 130 210 2.51e-18 84.0
Msa1263500 MtrunA17_Chr3g0129321 47.297 74 38 1 253 326 105 177 4.11e-18 82.8
Msa1263500 MtrunA17_Chr5g0401821 48.684 76 39 0 250 325 183 258 6.13e-18 84.0
Msa1263500 MtrunA17_Chr4g0053281 48.101 79 41 0 250 328 250 328 6.93e-18 84.7
Msa1263500 MtrunA17_Chr8g0379461 52.113 71 29 1 266 336 76 141 1.51e-17 82.0
Msa1263500 MtrunA17_Chr2g0319961 50.000 70 35 0 257 326 71 140 2.46e-17 82.0
Msa1263500 MtrunA17_Chr8g0348311 52.113 71 34 0 266 336 155 225 2.89e-17 83.2
Msa1263500 MtrunA17_Chr8g0383351 47.368 76 38 2 249 323 142 216 3.96e-17 80.9
Msa1263500 MtrunA17_Chr7g0228941 47.887 71 37 0 253 323 39 109 4.56e-17 77.4
Msa1263500 MtrunA17_Chr1g0188941 41.667 84 48 1 243 326 28 110 5.18e-17 77.0
Msa1263500 MtrunA17_Chr1g0184691 52.308 65 28 1 267 328 294 358 6.54e-17 82.4
Msa1263500 MtrunA17_Chr4g0071521 47.297 74 39 0 250 323 229 302 7.63e-17 81.6
Msa1263500 MtrunA17_Chr2g0284321 51.613 62 30 0 266 327 35 96 8.13e-17 79.3
Msa1263500 MtrunA17_Chr2g0293481 48.571 70 36 0 267 336 268 337 1.36e-16 82.4
Msa1263500 MtrunA17_Chr3g0139021 45.946 74 40 0 250 323 298 371 5.66e-16 79.7
Msa1263500 MtrunA17_Chr2g0289181 34.074 135 79 3 261 385 9 143 7.70e-16 77.0
Msa1263500 MtrunA17_Chr7g0248691 37.607 117 71 2 222 336 108 224 8.81e-16 78.6
Msa1263500 MtrunA17_Chr6g0485431 48.000 75 37 2 253 326 141 214 1.23e-14 75.5
Msa1263500 MtrunA17_Chr8g0387501 44.286 70 39 0 267 336 130 199 1.33e-14 73.9
Msa1263500 MtrunA17_Chr7g0238921 52.308 65 30 1 266 330 124 187 1.37e-14 74.7
Msa1263500 MtrunA17_Chr1g0189391 43.056 72 39 2 253 323 84 154 1.25e-13 72.0
Msa1263500 MtrunA17_Chr1g0202461 43.421 76 43 0 267 342 262 337 1.76e-13 72.0
Msa1263500 MtrunA17_Chr3g0126391 53.333 60 26 1 265 322 132 191 5.21e-13 70.1
Msa1263500 MtrunA17_Chr5g0432071 38.462 78 46 2 266 343 104 179 1.52e-12 67.0
Msa1263500 MtrunA17_Chr8g0347251 47.826 69 34 1 265 331 135 203 1.96e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263500 AT1G62300.1 50.097 517 185 18 4 475 50 538 2.77e-122 369
Msa1263500 AT4G04450.1 47.012 502 189 16 28 475 25 503 3.37e-121 365
Msa1263500 AT4G22070.4 47.318 522 169 15 27 475 26 514 6.73e-110 337
Msa1263500 AT4G22070.3 47.318 522 169 15 27 475 26 514 6.73e-110 337
Msa1263500 AT4G22070.2 47.318 522 169 15 27 475 26 514 6.73e-110 337
Msa1263500 AT4G22070.1 47.318 522 169 15 27 475 26 514 6.73e-110 337
Msa1263500 AT4G04450.2 48.826 426 158 14 93 475 1 409 4.73e-107 326
Msa1263500 AT4G01720.1 44.388 392 169 16 97 472 85 443 9.65e-64 215
Msa1263500 AT5G15130.2 44.118 272 115 5 238 477 157 423 1.06e-49 178
Msa1263500 AT5G15130.1 44.118 272 115 5 238 477 199 465 1.64e-49 178
Msa1263500 AT1G68150.1 42.857 231 105 6 128 347 102 316 1.07e-46 167
Msa1263500 AT1G18860.1 41.034 290 110 6 249 477 222 511 6.34e-44 162
Msa1263500 AT1G69810.1 37.338 308 151 11 116 389 23 322 5.66e-38 143
Msa1263500 AT1G69810.2 54.930 142 58 3 249 389 128 264 2.45e-36 137
Msa1263500 AT4G31800.1 33.735 249 126 6 105 344 36 254 1.53e-29 118
Msa1263500 AT1G80840.1 32.520 246 109 8 92 326 7 206 1.83e-27 112
Msa1263500 AT4G31800.2 55.000 80 36 0 265 344 110 189 3.51e-25 104
Msa1263500 AT2G38470.1 53.086 81 37 1 248 328 344 423 2.69e-24 106
Msa1263500 AT2G38470.1 46.575 73 36 3 254 326 173 242 8.76e-13 70.9
Msa1263500 AT4G26640.5 55.128 78 34 1 249 326 188 264 6.50e-24 103
Msa1263500 AT4G26640.5 38.095 84 50 2 243 326 12 93 4.55e-12 68.2
Msa1263500 AT4G26640.6 55.128 78 34 1 249 326 188 264 6.50e-24 103
Msa1263500 AT4G26640.6 38.095 84 50 2 243 326 12 93 4.55e-12 68.2
Msa1263500 AT4G26640.4 55.128 78 34 1 249 326 188 264 6.50e-24 103
Msa1263500 AT4G26640.4 38.095 84 50 2 243 326 12 93 4.55e-12 68.2
Msa1263500 AT4G26640.3 55.128 78 34 1 249 326 188 264 6.50e-24 103
Msa1263500 AT4G26640.3 38.095 84 50 2 243 326 12 93 4.55e-12 68.2
Msa1263500 AT4G26640.7 55.128 78 34 1 249 326 324 400 1.51e-23 104
Msa1263500 AT4G26640.7 38.095 84 50 2 243 326 148 229 6.61e-12 68.2
Msa1263500 AT4G26640.1 55.128 78 34 1 249 326 292 368 1.59e-23 103
Msa1263500 AT4G26640.1 38.095 84 50 2 243 326 116 197 6.69e-12 68.2
Msa1263500 AT4G26640.2 55.128 78 34 1 249 326 364 440 1.92e-23 103
Msa1263500 AT4G26640.2 38.095 84 50 2 243 326 188 269 6.90e-12 68.2
Msa1263500 AT2G25000.2 32.338 201 94 4 130 330 9 167 2.84e-23 98.6
Msa1263500 AT2G25000.4 32.338 201 94 4 130 330 9 167 2.84e-23 98.6
Msa1263500 AT5G56270.1 50.000 90 44 1 239 328 460 548 2.93e-23 103
Msa1263500 AT5G56270.1 49.180 61 29 2 267 327 274 332 2.17e-11 67.0
Msa1263500 AT2G25000.1 31.250 224 104 5 107 330 37 210 3.60e-23 99.4
Msa1263500 AT5G26170.1 52.778 72 33 1 252 323 99 169 3.85e-23 96.7
Msa1263500 AT2G04880.2 47.674 86 44 1 245 330 262 346 4.12e-23 102
Msa1263500 AT2G04880.2 31.081 148 82 5 264 400 109 247 5.65e-13 71.2
Msa1263500 AT2G25000.3 48.276 87 45 0 244 330 103 189 4.55e-23 98.6
Msa1263500 AT2G04880.1 47.674 86 44 1 245 330 286 370 5.84e-23 102
Msa1263500 AT2G04880.1 47.143 70 34 3 264 332 109 176 1.45e-12 70.1
Msa1263500 AT1G29860.1 46.392 97 48 2 250 346 120 212 5.98e-23 99.0
Msa1263500 AT5G49520.1 51.948 77 36 1 250 326 205 280 7.29e-23 100
Msa1263500 AT5G07100.2 43.689 103 56 2 240 341 115 216 8.70e-23 97.1
Msa1263500 AT5G07100.2 39.189 74 44 1 266 339 24 96 4.67e-11 63.2
Msa1263500 AT5G07100.4 43.689 103 56 2 240 341 115 216 8.70e-23 97.1
Msa1263500 AT5G07100.4 39.189 74 44 1 266 339 24 96 4.67e-11 63.2
Msa1263500 AT5G07100.5 43.689 103 56 2 240 341 115 216 8.70e-23 97.1
Msa1263500 AT5G07100.5 39.189 74 44 1 266 339 24 96 4.67e-11 63.2
Msa1263500 AT5G07100.3 43.689 103 56 2 240 341 115 216 8.70e-23 97.1
Msa1263500 AT5G07100.3 39.189 74 44 1 266 339 24 96 4.67e-11 63.2
Msa1263500 AT1G13960.2 43.697 119 53 4 209 326 210 315 1.06e-22 99.8
Msa1263500 AT1G13960.2 49.180 61 29 2 266 326 76 134 6.34e-12 67.4
Msa1263500 AT1G13960.1 51.190 84 40 1 243 326 386 468 1.16e-22 101
Msa1263500 AT1G13960.1 49.180 61 29 2 266 326 229 287 5.97e-12 68.2
Msa1263500 AT5G07100.1 48.276 87 44 1 240 326 208 293 1.30e-22 98.6
Msa1263500 AT2G03340.1 48.837 86 43 1 243 328 392 476 1.19e-21 98.6
Msa1263500 AT2G03340.1 49.180 61 29 2 266 326 250 308 2.70e-12 69.3
Msa1263500 AT4G18170.1 51.948 77 36 1 250 326 156 231 1.56e-21 95.9
Msa1263500 AT2G47260.1 45.161 93 50 1 242 334 150 241 2.34e-21 95.5
Msa1263500 AT5G13080.1 53.425 73 33 1 253 325 54 125 2.36e-21 90.9
Msa1263500 AT1G64000.1 45.882 85 45 1 240 324 88 171 2.76e-21 92.0
Msa1263500 AT5G41570.1 51.250 80 37 2 246 324 77 155 6.55e-21 90.5
Msa1263500 AT2G46130.1 47.126 87 45 1 238 324 2 87 9.04e-21 87.8
Msa1263500 AT4G26440.1 41.071 112 63 2 239 350 345 453 2.12e-20 94.7
Msa1263500 AT3G62340.1 53.165 79 36 1 253 331 105 182 2.28e-20 91.7
Msa1263500 AT1G55600.1 43.333 90 50 1 239 328 280 368 2.39e-20 94.4
Msa1263500 AT3G01080.1 46.429 84 44 1 243 326 283 365 2.66e-20 93.6
Msa1263500 AT3G01080.1 49.180 61 29 2 266 326 167 225 9.57e-11 64.3
Msa1263500 AT3G01080.2 49.367 79 39 1 248 326 326 403 2.87e-20 94.0
Msa1263500 AT3G01080.2 49.180 61 29 2 266 326 205 263 9.90e-11 64.3
Msa1263500 AT4G30935.1 41.176 119 58 3 233 343 298 412 3.75e-20 93.6
Msa1263500 AT1G69310.4 45.783 83 44 1 241 323 122 203 4.05e-20 90.9
Msa1263500 AT1G69310.2 45.783 83 44 1 241 323 122 203 4.05e-20 90.9
Msa1263500 AT1G69310.1 45.783 83 44 1 241 323 122 203 4.05e-20 90.9
Msa1263500 AT2G30250.1 50.000 80 39 1 249 328 311 389 4.27e-20 92.8
Msa1263500 AT5G46350.1 50.000 74 36 1 253 326 170 242 4.38e-20 91.7
Msa1263500 AT3G01970.1 51.389 72 34 1 252 323 51 121 1.50e-19 85.9
Msa1263500 AT2G30590.1 50.000 82 40 1 250 330 297 378 1.05e-18 88.2
Msa1263500 AT2G23320.1 59.322 59 24 0 267 325 241 299 1.06e-18 87.4
Msa1263500 AT3G58710.1 42.056 107 47 2 235 326 25 131 1.21e-18 86.3
Msa1263500 AT5G64810.1 47.887 71 36 1 253 323 97 166 1.37e-18 84.3
Msa1263500 AT3G58710.2 42.453 106 47 2 235 326 25 130 1.89e-18 85.9
Msa1263500 AT2G44745.1 46.667 75 39 1 249 323 128 201 4.01e-18 83.6
Msa1263500 AT5G28650.1 62.264 53 20 0 271 323 267 319 4.03e-18 85.9
Msa1263500 AT1G29280.1 52.459 61 29 0 266 326 74 134 6.88e-18 84.0
Msa1263500 AT4G39410.1 48.000 75 38 1 249 323 206 279 1.01e-17 84.3
Msa1263500 AT3G04670.1 57.895 57 24 0 267 323 263 319 2.17e-17 83.6
Msa1263500 AT4G24240.1 48.684 76 39 0 250 325 265 340 2.98e-17 83.6
Msa1263500 AT4G31550.2 48.649 74 38 0 250 323 229 302 3.02e-17 83.2
Msa1263500 AT4G31550.1 48.649 74 38 0 250 323 230 303 3.06e-17 83.2
Msa1263500 AT4G31800.3 30.769 208 105 6 105 303 36 213 3.48e-17 81.3
Msa1263500 AT2G24570.1 48.649 74 38 0 250 323 227 300 4.27e-17 82.8
Msa1263500 AT2G37260.3 45.977 87 41 3 261 342 264 349 1.61e-16 81.3
Msa1263500 AT2G37260.3 43.243 74 40 2 267 340 86 157 7.84e-14 73.2
Msa1263500 AT4G01250.1 40.426 94 51 1 248 336 105 198 1.74e-16 80.5
Msa1263500 AT2G37260.2 45.977 87 41 3 261 342 262 347 1.78e-16 81.3
Msa1263500 AT2G37260.2 43.243 74 40 2 267 340 84 155 8.69e-14 73.2
Msa1263500 AT5G52830.1 46.753 77 41 0 260 336 159 235 1.92e-16 81.3
Msa1263500 AT2G34830.1 46.053 76 40 1 252 326 200 275 2.08e-16 81.6
Msa1263500 AT2G34830.2 46.053 76 40 1 252 326 209 284 2.40e-16 81.6
Msa1263500 AT1G30650.1 46.053 76 40 1 252 326 202 277 2.42e-16 81.6
Msa1263500 AT2G37260.1 45.977 87 41 3 261 342 344 429 3.67e-16 80.9
Msa1263500 AT2G37260.1 43.243 74 40 2 267 340 166 237 1.44e-13 73.2
Msa1263500 AT2G46130.2 43.678 87 44 2 238 324 2 83 8.68e-16 73.6
Msa1263500 AT4G23550.1 41.975 81 47 0 261 341 135 215 1.55e-15 77.8
Msa1263500 AT1G69310.3 42.169 83 43 2 241 323 122 199 3.72e-15 76.3
Msa1263500 AT5G43290.1 35.455 110 52 3 223 331 87 178 1.23e-14 74.7
Msa1263500 AT5G45050.1 40.449 89 41 1 266 342 1180 1268 2.08e-13 73.6
Msa1263500 AT5G45050.2 40.449 89 41 1 266 342 1152 1240 2.09e-13 73.6
Msa1263500 AT5G45050.4 40.449 89 41 1 266 342 1041 1129 2.38e-13 73.6
Msa1263500 AT2G21900.1 43.548 62 34 1 265 326 108 168 2.88e-13 69.3
Msa1263500 AT2G46400.1 42.500 80 44 1 245 322 83 162 3.99e-12 67.4
Msa1263500 AT5G24110.1 50.000 60 28 1 265 322 112 171 5.17e-12 67.4
Msa1263500 AT5G45260.1 37.255 102 57 3 242 341 1189 1285 8.34e-12 68.6
Msa1263500 AT2G40740.1 35.849 106 51 3 266 354 173 278 2.62e-11 65.1
Msa1263500 AT2G40740.3 35.849 106 51 3 266 354 182 287 3.74e-11 64.7
Msa1263500 AT3G01080.3 49.180 61 29 2 266 326 205 263 5.82e-11 64.3

Find 131 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGAAGGCCGGAGAATT+TGG 0.150973 8_2:-66697480 None:intergenic
AAGAATTCTGGCTAGTAAAT+TGG 0.190593 8_2:-66697270 None:intergenic
TCAGCATTTCCTTCAGCTTT+TGG 0.196513 8_2:-66696256 None:intergenic
GCTGCTACTGTGTTACTATC+TGG 0.288928 8_2:+66697215 Msa1263500:CDS
GGGATTACTGTTATTGTTGC+TGG 0.289882 8_2:-66697639 None:intergenic
GGCATTGGAGGGGTTTAATC+TGG 0.291166 8_2:-66696651 None:intergenic
GGGAGGAGCAGCACCAATTA+TGG 0.310343 8_2:-66697618 None:intergenic
GAGGCTGTCCAAGCTGGAAT+TGG 0.315291 8_2:-66697400 None:intergenic
CTGTTTGGCAAGAGAGCTTA+TGG 0.316403 8_2:+66697736 Msa1263500:three_prime_UTR
CACTTCCGGTGTTAGTAATA+AGG 0.320090 8_2:-66695900 None:intergenic
AGAATTCTGGCTAGTAAATT+GGG 0.323046 8_2:-66697269 None:intergenic
TTCTGAGGTGTGCATGGTTC+AGG 0.327374 8_2:-66696563 None:intergenic
ATCAGAACTAGTACAACTTT+TGG 0.338708 8_2:+66696613 Msa1263500:CDS
CACCATTGATTGATCACTTC+CGG 0.338711 8_2:-66695914 None:intergenic
GGATGCCAATGGCGAAAATA+TGG 0.339559 8_2:+66696860 Msa1263500:CDS
GGTAGCACTGTTGATGATAT+TGG 0.345701 8_2:-66697660 None:intergenic
GAAACATCATCAAGTTGTTC+TGG 0.348285 8_2:-66695439 None:intergenic
CCTGATCATGTTCTGTGGTT+TGG 0.349953 8_2:-66696346 None:intergenic
GCTGCTATCTCCTCCATAAT+TGG 0.361075 8_2:+66697605 Msa1263500:CDS
TGCTTGATCAGCGGCATTGG+AGG 0.372243 8_2:-66696663 None:intergenic
GTAGCACTGTTGATGATATT+GGG 0.374246 8_2:-66697659 None:intergenic
TTGGGTTCTATAAGTCTGTT+TGG 0.383456 8_2:+66697721 Msa1263500:three_prime_UTR
GCGAGTGCTGCCGTGAAGTT+TGG 0.385939 8_2:-66697581 None:intergenic
CGGCATGAATCGTGTAACTA+TGG 0.386196 8_2:+66695375 Msa1263500:CDS
CTTGGACAGCCTCAAAACTT+TGG 0.392430 8_2:+66697410 Msa1263500:CDS
GTTCTGTTGCTGTTGCATTA+AGG 0.395721 8_2:-66696324 None:intergenic
AGAGCAATTAGGAAGAATTC+TGG 0.399082 8_2:-66697282 None:intergenic
TTACAGATGCACAATGGCTC+TGG 0.402318 8_2:+66696922 Msa1263500:CDS
AGACTCACTTGTTTGCGAAC+GGG 0.403359 8_2:-66696950 None:intergenic
AGTTCTGATGCGTCTGGATC+AGG 0.404046 8_2:-66696599 None:intergenic
TGATCATCCACTTCTGCTGC+TGG 0.410282 8_2:-66696533 None:intergenic
CCTGTTGAGTTGGATGCAAC+TGG 0.412568 8_2:-66697526 None:intergenic
TACCATGTGGGCTTCTGATC+GGG 0.414425 8_2:-66696729 None:intergenic
TTCAGGAAGCTAGAAGCTCT+TGG 0.420968 8_2:+66697702 Msa1263500:three_prime_UTR
CAACATCTTGAGACATTTGA+AGG 0.433132 8_2:-66697493 None:intergenic
CTGTAATATGCGCGAGGACA+AGG 0.435386 8_2:-66696905 None:intergenic
TATCTGTAGTGTCGCGTGTA+AGG 0.437510 8_2:-66697358 None:intergenic
CCAGTTGCATCCAACTCAAC+AGG 0.445863 8_2:+66697526 Msa1263500:CDS
TCAGGAAGCTAGAAGCTCTT+GGG 0.449470 8_2:+66697703 Msa1263500:three_prime_UTR
AGGCTGTCCAAGCTGGAATT+GGG 0.454087 8_2:-66697399 None:intergenic
TCCTAATTGCTCTTCTAGCA+TGG 0.455237 8_2:+66697292 Msa1263500:CDS
TATAACCAATCCAAATTCTC+CGG 0.471393 8_2:+66697470 Msa1263500:CDS
GTGTGCATGGTTCAGGCTCT+TGG 0.473309 8_2:-66696556 None:intergenic
GAAATTGACCTGTTCAGTCT+TGG 0.478191 8_2:-66695974 None:intergenic
GCTGCGGTGGTCGATGCCAT+TGG 0.480782 8_2:-66697191 None:intergenic
CTGCTACTGTGTTACTATCT+GGG 0.480934 8_2:+66697216 Msa1263500:CDS
GCTTGATCAGCGGCATTGGA+GGG 0.485891 8_2:-66696662 None:intergenic
GAAGTTTGGATCCGCGGTGA+TGG 0.486096 8_2:-66697567 None:intergenic
CAAAACGCAAATAGACTCAT+AGG 0.486782 8_2:-66697759 None:intergenic
CAGCCTCAAAACTTTGGATC+AGG 0.489452 8_2:+66697416 Msa1263500:CDS
GGATTACTGTTATTGTTGCT+GGG 0.489961 8_2:-66697638 None:intergenic
TCTAGTGTCACAGTAGGAAA+TGG 0.493043 8_2:-66697335 None:intergenic
TGTACTAGTTCTGATGCGTC+TGG 0.496058 8_2:-66696605 None:intergenic
TAAGCGTGCCAAGACTGAAC+AGG 0.497408 8_2:+66695966 Msa1263500:CDS
ATTTGCTTGATCAGCGGCAT+TGG 0.498345 8_2:-66696666 None:intergenic
GGCTCTTTCTGATTGTTCTG+AGG 0.499101 8_2:-66696578 None:intergenic
GGCATAGCAGCAGGTGGGAG+TGG 0.499597 8_2:-66697170 None:intergenic
ATCTTGAGACATTTGAAGGC+CGG 0.503538 8_2:-66697489 None:intergenic
TAGCAGCAGGTGGGAGTGGA+TGG 0.505934 8_2:-66697166 None:intergenic
GACTCACTTGTTTGCGAACG+GGG 0.507020 8_2:-66696949 None:intergenic
TCTCCTTCCCAATTCCAGCT+TGG 0.508244 8_2:+66697392 Msa1263500:CDS
TTTACATTTCAGATTGTCAA+AGG 0.510724 8_2:+66696458 Msa1263500:intron
CTTGATCAGCGGCATTGGAG+GGG 0.514641 8_2:-66696661 None:intergenic
CCAAACCACAGAACATGATC+AGG 0.515476 8_2:+66696346 Msa1263500:CDS
ATACCATGTGGGCTTCTGAT+CGG 0.516534 8_2:-66696730 None:intergenic
ATGAATCTAATAAGCACAAA+CGG 0.517014 8_2:+66695304 Msa1263500:CDS
GGTCAATGTCAAGTGCTGAT+GGG 0.517767 8_2:+66697237 Msa1263500:CDS
GGGTCAATGTCAAGTGCTGA+TGG 0.517914 8_2:+66697236 Msa1263500:CDS
TGATTGTTCTGAGGTGTGCA+TGG 0.520062 8_2:-66696569 None:intergenic
GCCATGCTAGAAGAGCAATT+AGG 0.522733 8_2:-66697293 None:intergenic
AAAGGAAAAGCTGAGGAGAA+AGG 0.526527 8_2:+66696476 Msa1263500:CDS
GAGCAATTGCAAGAGGAGCT+TGG 0.528717 8_2:+66696191 Msa1263500:CDS
AAAGCTGAGGAGAAAGGAGA+TGG 0.531880 8_2:+66696482 Msa1263500:CDS
GCATTGGAGGGGTTTAATCT+GGG 0.534841 8_2:-66696650 None:intergenic
GATGCCATTGGCATAGCAGC+AGG 0.540165 8_2:-66697179 None:intergenic
GTTTGGATCCGCGGTGATGG+CGG 0.540992 8_2:-66697564 None:intergenic
GATCAATCAATGGTGGATGA+TGG 0.542601 8_2:+66695922 Msa1263500:CDS
TTAATCTGGGAAGCTGACTT+CGG 0.543926 8_2:-66696637 None:intergenic
TCACAATTGCAGATCAATGA+TGG 0.544968 8_2:+66696839 Msa1263500:intron
TGTGGGCTTCTGATCGGGCA+CGG 0.545553 8_2:-66696724 None:intergenic
TACAGATGCACAATGGCTCT+GGG 0.545795 8_2:+66696923 Msa1263500:CDS
AGTGATGATGCCTGTTGAGT+TGG 0.552709 8_2:-66697536 None:intergenic
CACCGGAAGTGATCAATCAA+TGG 0.556816 8_2:+66695912 Msa1263500:CDS
CTTCAAATGTCTCAAGATGT+TGG 0.558376 8_2:+66697494 Msa1263500:CDS
CAGACTCACTTGTTTGCGAA+CGG 0.559552 8_2:-66696951 None:intergenic
CACAGTAGCAGCAGCTGCGG+TGG 0.562058 8_2:-66697204 None:intergenic
GAATGGTCCAGCAGCAGAAG+TGG 0.565888 8_2:+66696526 Msa1263500:CDS
TTCTGCATTTGCTTGATCAG+CGG 0.571955 8_2:-66696672 None:intergenic
CCCACCTGCTGCTATGCCAA+TGG 0.574594 8_2:+66697175 Msa1263500:CDS
GAAGGCCGGAGAATTTGGAT+TGG 0.577352 8_2:-66697475 None:intergenic
CGCGACACTACAGATAATAA+CGG 0.582926 8_2:+66697365 Msa1263500:CDS
GCCATTGGCATAGCAGCAGG+TGG 0.589340 8_2:-66697176 None:intergenic
TGTAATATGCGCGAGGACAA+GGG 0.590385 8_2:-66696904 None:intergenic
CAACTCCTTATTACTAACAC+CGG 0.591469 8_2:+66695895 Msa1263500:CDS
CAAATGTCTCAAGATGTTGG+AGG 0.596501 8_2:+66697497 Msa1263500:CDS
AATCACCTGATCATGTTCTG+TGG 0.597094 8_2:-66696351 None:intergenic
GTGCTTATTAGATTCATCGT+CGG 0.598438 8_2:-66695298 None:intergenic
ATTATAGGTTCAACGTTGTG+CGG 0.604622 8_2:+66697100 Msa1263500:intron
CGCATATTACAGATGCACAA+TGG 0.609217 8_2:+66696916 Msa1263500:CDS
TGCAGAGAACCAAAAGCTGA+AGG 0.611336 8_2:+66696247 Msa1263500:CDS
CACCGCGGATCCAAACTTCA+CGG 0.616851 8_2:+66697571 Msa1263500:CDS
TGCCCGATCAGAAGCCCACA+TGG 0.617135 8_2:+66696727 Msa1263500:CDS
CGGAAGTGATCAATCAATGG+TGG 0.617601 8_2:+66695915 Msa1263500:CDS
TGCCGTGAAGTTTGGATCCG+CGG 0.618501 8_2:-66697573 None:intergenic
GTCAATGTCAAGTGCTGATG+GGG 0.622615 8_2:+66697238 Msa1263500:CDS
TTGGAGTGTGTAATAGCAAG+AGG 0.623545 8_2:+66696210 Msa1263500:CDS
TGTCCAAGCTGGAATTGGGA+AGG 0.625433 8_2:-66697395 None:intergenic
TTAGACGGAGCAATTGCAAG+AGG 0.625946 8_2:+66696184 Msa1263500:intron
GAATTCTGGCTAGTAAATTG+GGG 0.628387 8_2:-66697268 None:intergenic
GTGGCTAGAAAGTTGATGAA+TGG 0.628570 8_2:+66696509 Msa1263500:CDS
GTAAGGTCTAGTGTCACAGT+AGG 0.632116 8_2:-66697341 None:intergenic
TGAGGAGAAAGGAGATGGTG+TGG 0.634590 8_2:+66696487 Msa1263500:CDS
TTACTGTTATTGTTGCTGGG+AGG 0.638488 8_2:-66697635 None:intergenic
ATAGGTTCAACGTTGTGCGG+AGG 0.648017 8_2:+66697103 Msa1263500:intron
TGGTGCTGATGCTGAGAGTG+TGG 0.648731 8_2:-66697315 None:intergenic
CCATTGGCATAGCAGCAGGT+GGG 0.656238 8_2:-66697175 None:intergenic
GATTGTCAAAGGAAAAGCTG+AGG 0.658561 8_2:+66696469 Msa1263500:intron
AGTGCTTGTGCAATCACTTG+TGG 0.658579 8_2:-66697446 None:intergenic
AGGAGCAGCACCAATTATGG+AGG 0.660834 8_2:-66697615 None:intergenic
TAACACAGTAGCAGCAGCTG+CGG 0.661912 8_2:-66697207 None:intergenic
TAAGCACAAACGGAGCAACA+TGG 0.662166 8_2:+66695314 Msa1263500:CDS
CTGTTGAGTTGGATGCAACT+GGG 0.664888 8_2:-66697525 None:intergenic
GTGCATCTGTAATATGCGCG+AGG 0.676244 8_2:-66696911 None:intergenic
ACTAATATAGTATACCATGT+GGG 0.681722 8_2:-66696741 None:intergenic
AGATCAATGATGGATGCCAA+TGG 0.705200 8_2:+66696849 Msa1263500:intron
AATGAAGATGATCAAAATCG+CGG 0.707922 8_2:+66695352 Msa1263500:CDS
GGAGAAAGGAGATGGTGTGG+TGG 0.745088 8_2:+66696490 Msa1263500:CDS
TCAGCGCGGAGATTGCAATG+AGG 0.745989 8_2:-66695502 None:intergenic
ACTAAGTGCCGCCATCACCG+CGG 0.753006 8_2:+66697556 Msa1263500:CDS
GAAGATGATCAAAATCGCGG+CGG 0.753200 8_2:+66695355 Msa1263500:CDS
TTACGTTGACATGGTCAGCG+CGG 0.778275 8_2:-66695516 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAAGAAAGAAAAAA+TGG - chr8_2:66695543-66695562 None:intergenic 10.0%
!! ATTAGTGAAATAAAAAATAT+TGG + chr8_2:66695720-66695739 Msa1263500:intron 10.0%
!! AATGTGAAAATATTTATCAT+AGG + chr8_2:66695816-66695835 Msa1263500:intron 15.0%
!! ATGTGAAAATATTTATCATA+GGG + chr8_2:66695817-66695836 Msa1263500:intron 15.0%
!! AAAATGAAATTAAACTAAGA+TGG - chr8_2:66696007-66696026 None:intergenic 15.0%
!!! TTAGTTTAATTTCATTTTAC+AGG + chr8_2:66696009-66696028 Msa1263500:intron 15.0%
!!! TAGTTTAATTTCATTTTACA+GGG + chr8_2:66696010-66696029 Msa1263500:intron 15.0%
!!! TGTTTCATTTGAAATATTAT+AGG + chr8_2:66697085-66697104 Msa1263500:intron 15.0%
!! AGTTACAAAGTAGAAATATA+AGG + chr8_2:66695573-66695592 Msa1263500:intron 20.0%
!! AGAAATATAAGGAAAATACT+TGG + chr8_2:66695584-66695603 Msa1263500:intron 20.0%
!! AATATTTATCATAGGGATTA+CGG + chr8_2:66695824-66695843 Msa1263500:intron 20.0%
!!! AGTTTAATTTCATTTTACAG+GGG + chr8_2:66696011-66696030 Msa1263500:intron 20.0%
!!! TACACTTGTTAAATTTTAGA+CGG + chr8_2:66696169-66696188 Msa1263500:intron 20.0%
!!! GGTATAAAGATATTTTAAAC+TGG - chr8_2:66696393-66696412 None:intergenic 20.0%
!!! TCATAATTTCATTTCAAGTT+CGG - chr8_2:66696415-66696434 None:intergenic 20.0%
!! TTGAAATGAAATTATGAAAC+TGG + chr8_2:66696418-66696437 Msa1263500:intron 20.0%
!! ATTAGTTAATTAAATCAGCT+AGG - chr8_2:66696816-66696835 None:intergenic 20.0%
!!! ATTTTGATAACAACATATGA+AGG + chr8_2:66697134-66697153 Msa1263500:CDS 20.0%
!!! TTTTGATAACAACATATGAA+GGG + chr8_2:66697135-66697154 Msa1263500:CDS 20.0%
! ATGAATCTAATAAGCACAAA+CGG + chr8_2:66695304-66695323 Msa1263500:CDS 25.0%
!!! TAAATACGATATTTGGTTTG+GGG - chr8_2:66695611-66695630 None:intergenic 25.0%
!! GTAAATACGATATTTGGTTT+GGG - chr8_2:66695612-66695631 None:intergenic 25.0%
! AGTAAATACGATATTTGGTT+TGG - chr8_2:66695613-66695632 None:intergenic 25.0%
! CAAACAGTAAATACGATATT+TGG - chr8_2:66695618-66695637 None:intergenic 25.0%
!!! CATAATTTCATTTCAAGTTC+GGG - chr8_2:66696414-66696433 None:intergenic 25.0%
! AATGAAATTATGAAACTGGA+TGG + chr8_2:66696422-66696441 Msa1263500:intron 25.0%
! TTTACATTTCAGATTGTCAA+AGG + chr8_2:66696458-66696477 Msa1263500:intron 25.0%
! ACTAATATAGTATACCATGT+GGG - chr8_2:66696744-66696763 None:intergenic 25.0%
!! AAAAATATGCTACTGATTGT+AGG - chr8_2:66697684-66697703 None:intergenic 25.0%
AATGAAGATGATCAAAATCG+CGG + chr8_2:66695352-66695371 Msa1263500:CDS 30.0%
!! TCATAATTACCTTTGAAGTG+TGG + chr8_2:66695750-66695769 Msa1263500:intron 30.0%
TTGATGCAAATATTGTAGAC+TGG + chr8_2:66695868-66695887 Msa1263500:intron 30.0%
! ATCAGAACTAGTACAACTTT+TGG + chr8_2:66696613-66696632 Msa1263500:CDS 30.0%
CACTAATATAGTATACCATG+TGG - chr8_2:66696745-66696764 None:intergenic 30.0%
GCGAAAATATGGACAAAAAA+TGG + chr8_2:66696871-66696890 Msa1263500:CDS 30.0%
TATGGACAAAAAATGGCTAA+AGG + chr8_2:66696878-66696897 Msa1263500:CDS 30.0%
! AGAATTCTGGCTAGTAAATT+GGG - chr8_2:66697272-66697291 None:intergenic 30.0%
! AAGAATTCTGGCTAGTAAAT+TGG - chr8_2:66697273-66697292 None:intergenic 30.0%
TATAACCAATCCAAATTCTC+CGG + chr8_2:66697470-66697489 Msa1263500:CDS 30.0%
! CAATCAGTAGCATATTTTTC+AGG + chr8_2:66697685-66697704 Msa1263500:exon 30.0%
GTGCTTATTAGATTCATCGT+CGG - chr8_2:66695301-66695320 None:intergenic 35.0%
! GAAACATCATCAAGTTGTTC+TGG - chr8_2:66695442-66695461 None:intergenic 35.0%
AAAAATGGCTTACGTTGACA+TGG - chr8_2:66695528-66695547 None:intergenic 35.0%
AAATCACAACCACACTTCAA+AGG - chr8_2:66695762-66695781 None:intergenic 35.0%
CAACTCCTTATTACTAACAC+CGG + chr8_2:66695895-66695914 Msa1263500:CDS 35.0%
TCACAATTGCAGATCAATGA+TGG + chr8_2:66696839-66696858 Msa1263500:intron 35.0%
! TTTGTCCATATTTTCGCCAT+TGG - chr8_2:66696868-66696887 None:intergenic 35.0%
ATTATAGGTTCAACGTTGTG+CGG + chr8_2:66697100-66697119 Msa1263500:intron 35.0%
! GAATTCTGGCTAGTAAATTG+GGG - chr8_2:66697271-66697290 None:intergenic 35.0%
AGAGCAATTAGGAAGAATTC+TGG - chr8_2:66697285-66697304 None:intergenic 35.0%
CAACATCTTGAGACATTTGA+AGG - chr8_2:66697496-66697515 None:intergenic 35.0%
CTTCAAATGTCTCAAGATGT+TGG + chr8_2:66697494-66697513 Msa1263500:CDS 35.0%
GGATTACTGTTATTGTTGCT+GGG - chr8_2:66697641-66697660 None:intergenic 35.0%
!! GTAGCACTGTTGATGATATT+GGG - chr8_2:66697662-66697681 None:intergenic 35.0%
TTGGGTTCTATAAGTCTGTT+TGG + chr8_2:66697721-66697740 Msa1263500:three_prime_UTR 35.0%
CAAAACGCAAATAGACTCAT+AGG - chr8_2:66697762-66697781 None:intergenic 35.0%
! CACTTCCGGTGTTAGTAATA+AGG - chr8_2:66695903-66695922 None:intergenic 40.0%
! CACCATTGATTGATCACTTC+CGG - chr8_2:66695917-66695936 None:intergenic 40.0%
!! GATCAATCAATGGTGGATGA+TGG + chr8_2:66695922-66695941 Msa1263500:CDS 40.0%
GAAATTGACCTGTTCAGTCT+TGG - chr8_2:66695977-66695996 None:intergenic 40.0%
TTGGAGTGTGTAATAGCAAG+AGG + chr8_2:66696210-66696229 Msa1263500:CDS 40.0%
! TCAGCATTTCCTTCAGCTTT+TGG - chr8_2:66696259-66696278 None:intergenic 40.0%
! GTTCTGTTGCTGTTGCATTA+AGG - chr8_2:66696327-66696346 None:intergenic 40.0%
AATCACCTGATCATGTTCTG+TGG - chr8_2:66696354-66696373 None:intergenic 40.0%
GATTGTCAAAGGAAAAGCTG+AGG + chr8_2:66696469-66696488 Msa1263500:intron 40.0%
AAAGGAAAAGCTGAGGAGAA+AGG + chr8_2:66696476-66696495 Msa1263500:CDS 40.0%
!! GTGGCTAGAAAGTTGATGAA+TGG + chr8_2:66696509-66696528 Msa1263500:CDS 40.0%
! TTAATCTGGGAAGCTGACTT+CGG - chr8_2:66696640-66696659 None:intergenic 40.0%
TTCTGCATTTGCTTGATCAG+CGG - chr8_2:66696675-66696694 None:intergenic 40.0%
!! AGATCAATGATGGATGCCAA+TGG + chr8_2:66696849-66696868 Msa1263500:intron 40.0%
CGCATATTACAGATGCACAA+TGG + chr8_2:66696916-66696935 Msa1263500:CDS 40.0%
GACGCATATTATGAGACGAA+AGG - chr8_2:66697055-66697074 None:intergenic 40.0%
! CTGCTACTGTGTTACTATCT+GGG + chr8_2:66697216-66697235 Msa1263500:CDS 40.0%
TCCTAATTGCTCTTCTAGCA+TGG + chr8_2:66697292-66697311 Msa1263500:CDS 40.0%
TCTAGTGTCACAGTAGGAAA+TGG - chr8_2:66697338-66697357 None:intergenic 40.0%
CGCGACACTACAGATAATAA+CGG + chr8_2:66697365-66697384 Msa1263500:CDS 40.0%
! TGTCCTGATCCAAAGTTTTG+AGG - chr8_2:66697422-66697441 None:intergenic 40.0%
ATCTTGAGACATTTGAAGGC+CGG - chr8_2:66697492-66697511 None:intergenic 40.0%
CAAATGTCTCAAGATGTTGG+AGG + chr8_2:66697497-66697516 Msa1263500:CDS 40.0%
TTACTGTTATTGTTGCTGGG+AGG - chr8_2:66697638-66697657 None:intergenic 40.0%
GGGATTACTGTTATTGTTGC+TGG - chr8_2:66697642-66697661 None:intergenic 40.0%
!! GGTAGCACTGTTGATGATAT+TGG - chr8_2:66697663-66697682 None:intergenic 40.0%
TAAGCACAAACGGAGCAACA+TGG + chr8_2:66695314-66695333 Msa1263500:CDS 45.0%
GAAGATGATCAAAATCGCGG+CGG + chr8_2:66695355-66695374 Msa1263500:CDS 45.0%
CGGCATGAATCGTGTAACTA+TGG + chr8_2:66695375-66695394 Msa1263500:CDS 45.0%
CACCGGAAGTGATCAATCAA+TGG + chr8_2:66695912-66695931 Msa1263500:CDS 45.0%
CGGAAGTGATCAATCAATGG+TGG + chr8_2:66695915-66695934 Msa1263500:CDS 45.0%
TTAGACGGAGCAATTGCAAG+AGG + chr8_2:66696184-66696203 Msa1263500:intron 45.0%
TGCAGAGAACCAAAAGCTGA+AGG + chr8_2:66696247-66696266 Msa1263500:CDS 45.0%
CCTGATCATGTTCTGTGGTT+TGG - chr8_2:66696349-66696368 None:intergenic 45.0%
CCAAACCACAGAACATGATC+AGG + chr8_2:66696346-66696365 Msa1263500:CDS 45.0%
AAAGCTGAGGAGAAAGGAGA+TGG + chr8_2:66696482-66696501 Msa1263500:CDS 45.0%
!! TGATTGTTCTGAGGTGTGCA+TGG - chr8_2:66696572-66696591 None:intergenic 45.0%
GGCTCTTTCTGATTGTTCTG+AGG - chr8_2:66696581-66696600 None:intergenic 45.0%
!! TGTACTAGTTCTGATGCGTC+TGG - chr8_2:66696608-66696627 None:intergenic 45.0%
GCATTGGAGGGGTTTAATCT+GGG - chr8_2:66696653-66696672 None:intergenic 45.0%
ATTTGCTTGATCAGCGGCAT+TGG - chr8_2:66696669-66696688 None:intergenic 45.0%
! GACTCGTGCTTTTCTCATAG+TGG - chr8_2:66696699-66696718 None:intergenic 45.0%
ATACCATGTGGGCTTCTGAT+CGG - chr8_2:66696733-66696752 None:intergenic 45.0%
GGATGCCAATGGCGAAAATA+TGG + chr8_2:66696860-66696879 Msa1263500:CDS 45.0%
TGTAATATGCGCGAGGACAA+GGG - chr8_2:66696907-66696926 None:intergenic 45.0%
TTACAGATGCACAATGGCTC+TGG + chr8_2:66696922-66696941 Msa1263500:CDS 45.0%
TACAGATGCACAATGGCTCT+GGG + chr8_2:66696923-66696942 Msa1263500:CDS 45.0%
AGACTCACTTGTTTGCGAAC+GGG - chr8_2:66696953-66696972 None:intergenic 45.0%
CAGACTCACTTGTTTGCGAA+CGG - chr8_2:66696954-66696973 None:intergenic 45.0%
! GCTGCTACTGTGTTACTATC+TGG + chr8_2:66697215-66697234 Msa1263500:CDS 45.0%
!! GGTCAATGTCAAGTGCTGAT+GGG + chr8_2:66697237-66697256 Msa1263500:CDS 45.0%
!! GTCAATGTCAAGTGCTGATG+GGG + chr8_2:66697238-66697257 Msa1263500:CDS 45.0%
GCCATGCTAGAAGAGCAATT+AGG - chr8_2:66697296-66697315 None:intergenic 45.0%
GTAAGGTCTAGTGTCACAGT+AGG - chr8_2:66697344-66697363 None:intergenic 45.0%
TATCTGTAGTGTCGCGTGTA+AGG - chr8_2:66697361-66697380 None:intergenic 45.0%
CTTGGACAGCCTCAAAACTT+TGG + chr8_2:66697410-66697429 Msa1263500:CDS 45.0%
CAGCCTCAAAACTTTGGATC+AGG + chr8_2:66697416-66697435 Msa1263500:CDS 45.0%
AGTGCTTGTGCAATCACTTG+TGG - chr8_2:66697449-66697468 None:intergenic 45.0%
CATTTGAAGGCCGGAGAATT+TGG - chr8_2:66697483-66697502 None:intergenic 45.0%
!! CTGTTGAGTTGGATGCAACT+GGG - chr8_2:66697528-66697547 None:intergenic 45.0%
! AGTGATGATGCCTGTTGAGT+TGG - chr8_2:66697539-66697558 None:intergenic 45.0%
GCTGCTATCTCCTCCATAAT+TGG + chr8_2:66697605-66697624 Msa1263500:CDS 45.0%
TTCAGGAAGCTAGAAGCTCT+TGG + chr8_2:66697702-66697721 Msa1263500:three_prime_UTR 45.0%
TCAGGAAGCTAGAAGCTCTT+GGG + chr8_2:66697703-66697722 Msa1263500:three_prime_UTR 45.0%
CTGTTTGGCAAGAGAGCTTA+TGG + chr8_2:66697736-66697755 Msa1263500:three_prime_UTR 45.0%
TTACGTTGACATGGTCAGCG+CGG - chr8_2:66695519-66695538 None:intergenic 50.0%
TAAGCGTGCCAAGACTGAAC+AGG + chr8_2:66695966-66695985 Msa1263500:CDS 50.0%
GAGCAATTGCAAGAGGAGCT+TGG + chr8_2:66696191-66696210 Msa1263500:CDS 50.0%
TGAGGAGAAAGGAGATGGTG+TGG + chr8_2:66696487-66696506 Msa1263500:CDS 50.0%
TGATCATCCACTTCTGCTGC+TGG - chr8_2:66696536-66696555 None:intergenic 50.0%
!! TTCTGAGGTGTGCATGGTTC+AGG - chr8_2:66696566-66696585 None:intergenic 50.0%
! AGTTCTGATGCGTCTGGATC+AGG - chr8_2:66696602-66696621 None:intergenic 50.0%
! GGCATTGGAGGGGTTTAATC+TGG - chr8_2:66696654-66696673 None:intergenic 50.0%
TACCATGTGGGCTTCTGATC+GGG - chr8_2:66696732-66696751 None:intergenic 50.0%
CTGTAATATGCGCGAGGACA+AGG - chr8_2:66696908-66696927 None:intergenic 50.0%
GTGCATCTGTAATATGCGCG+AGG - chr8_2:66696914-66696933 None:intergenic 50.0%
GACTCACTTGTTTGCGAACG+GGG - chr8_2:66696952-66696971 None:intergenic 50.0%
CGTTCGCAAACAAGTGAGTC+TGG + chr8_2:66696952-66696971 Msa1263500:intron 50.0%
ATAGGTTCAACGTTGTGCGG+AGG + chr8_2:66697103-66697122 Msa1263500:intron 50.0%
TAACACAGTAGCAGCAGCTG+CGG - chr8_2:66697210-66697229 None:intergenic 50.0%
!! GGGTCAATGTCAAGTGCTGA+TGG + chr8_2:66697236-66697255 Msa1263500:CDS 50.0%
TCTCCTTCCCAATTCCAGCT+TGG + chr8_2:66697392-66697411 Msa1263500:CDS 50.0%
TGTCCAAGCTGGAATTGGGA+AGG - chr8_2:66697398-66697417 None:intergenic 50.0%
AGGCTGTCCAAGCTGGAATT+GGG - chr8_2:66697402-66697421 None:intergenic 50.0%
!!! AGTTTTGAGGCTGTCCAAGC+TGG - chr8_2:66697409-66697428 None:intergenic 50.0%
GAAGGCCGGAGAATTTGGAT+TGG - chr8_2:66697478-66697497 None:intergenic 50.0%
!! CCTGTTGAGTTGGATGCAAC+TGG - chr8_2:66697529-66697548 None:intergenic 50.0%
CCAGTTGCATCCAACTCAAC+AGG + chr8_2:66697526-66697545 Msa1263500:CDS 50.0%
AGGAGCAGCACCAATTATGG+AGG - chr8_2:66697618-66697637 None:intergenic 50.0%
TCAGCGCGGAGATTGCAATG+AGG - chr8_2:66695505-66695524 None:intergenic 55.0%
GGAGAAAGGAGATGGTGTGG+TGG + chr8_2:66696490-66696509 Msa1263500:CDS 55.0%
GAATGGTCCAGCAGCAGAAG+TGG + chr8_2:66696526-66696545 Msa1263500:CDS 55.0%
GTGTGCATGGTTCAGGCTCT+TGG - chr8_2:66696559-66696578 None:intergenic 55.0%
! CTTGATCAGCGGCATTGGAG+GGG - chr8_2:66696664-66696683 None:intergenic 55.0%
! GCTTGATCAGCGGCATTGGA+GGG - chr8_2:66696665-66696684 None:intergenic 55.0%
! TGCTTGATCAGCGGCATTGG+AGG - chr8_2:66696666-66696685 None:intergenic 55.0%
CCATTGGCATAGCAGCAGGT+GGG - chr8_2:66697178-66697197 None:intergenic 55.0%
GATGCCATTGGCATAGCAGC+AGG - chr8_2:66697182-66697201 None:intergenic 55.0%
!! TGGTGCTGATGCTGAGAGTG+TGG - chr8_2:66697318-66697337 None:intergenic 55.0%
GAGGCTGTCCAAGCTGGAAT+TGG - chr8_2:66697403-66697422 None:intergenic 55.0%
GAAGTTTGGATCCGCGGTGA+TGG - chr8_2:66697570-66697589 None:intergenic 55.0%
CACCGCGGATCCAAACTTCA+CGG + chr8_2:66697571-66697590 Msa1263500:CDS 55.0%
TGCCGTGAAGTTTGGATCCG+CGG - chr8_2:66697576-66697595 None:intergenic 55.0%
GGGAGGAGCAGCACCAATTA+TGG - chr8_2:66697621-66697640 None:intergenic 55.0%
TGTGGGCTTCTGATCGGGCA+CGG - chr8_2:66696727-66696746 None:intergenic 60.0%
TGCCCGATCAGAAGCCCACA+TGG + chr8_2:66696727-66696746 Msa1263500:CDS 60.0%
TAGCAGCAGGTGGGAGTGGA+TGG - chr8_2:66697169-66697188 None:intergenic 60.0%
CCCACCTGCTGCTATGCCAA+TGG + chr8_2:66697175-66697194 Msa1263500:CDS 60.0%
GCCATTGGCATAGCAGCAGG+TGG - chr8_2:66697179-66697198 None:intergenic 60.0%
! ACTAAGTGCCGCCATCACCG+CGG + chr8_2:66697556-66697575 Msa1263500:CDS 60.0%
! GTTTGGATCCGCGGTGATGG+CGG - chr8_2:66697567-66697586 None:intergenic 60.0%
! GCGAGTGCTGCCGTGAAGTT+TGG - chr8_2:66697584-66697603 None:intergenic 60.0%
GGCATAGCAGCAGGTGGGAG+TGG - chr8_2:66697173-66697192 None:intergenic 65.0%
GCTGCGGTGGTCGATGCCAT+TGG - chr8_2:66697194-66697213 None:intergenic 65.0%
CACAGTAGCAGCAGCTGCGG+TGG - chr8_2:66697207-66697226 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 66695293 66697791 66695293 ID=Msa1263500;Name=Msa1263500
chr8_2 mRNA 66695293 66697791 66695293 ID=Msa1263500-mRNA-1;Parent=Msa1263500;Name=Msa1263500-mRNA-1;_AED=0.07;_eAED=0.07;_QI=11|1|0.66|1|1|1|6|97|497
chr8_2 exon 66695293 66695534 66695293 ID=Msa1263500-mRNA-1:exon:21806;Parent=Msa1263500-mRNA-1
chr8_2 exon 66695886 66695987 66695886 ID=Msa1263500-mRNA-1:exon:21807;Parent=Msa1263500-mRNA-1
chr8_2 exon 66696188 66696367 66696188 ID=Msa1263500-mRNA-1:exon:21808;Parent=Msa1263500-mRNA-1
chr8_2 exon 66696470 66696748 66696470 ID=Msa1263500-mRNA-1:exon:21809;Parent=Msa1263500-mRNA-1
chr8_2 exon 66696851 66696964 66696851 ID=Msa1263500-mRNA-1:exon:21810;Parent=Msa1263500-mRNA-1
chr8_2 exon 66697107 66697791 66697107 ID=Msa1263500-mRNA-1:exon:21811;Parent=Msa1263500-mRNA-1
chr8_2 five_prime_UTR 66695293 66695303 66695293 ID=Msa1263500-mRNA-1:five_prime_utr;Parent=Msa1263500-mRNA-1
chr8_2 CDS 66695304 66695534 66695304 ID=Msa1263500-mRNA-1:cds;Parent=Msa1263500-mRNA-1
chr8_2 CDS 66695886 66695987 66695886 ID=Msa1263500-mRNA-1:cds;Parent=Msa1263500-mRNA-1
chr8_2 CDS 66696188 66696367 66696188 ID=Msa1263500-mRNA-1:cds;Parent=Msa1263500-mRNA-1
chr8_2 CDS 66696470 66696748 66696470 ID=Msa1263500-mRNA-1:cds;Parent=Msa1263500-mRNA-1
chr8_2 CDS 66696851 66696964 66696851 ID=Msa1263500-mRNA-1:cds;Parent=Msa1263500-mRNA-1
chr8_2 CDS 66697107 66697694 66697107 ID=Msa1263500-mRNA-1:cds;Parent=Msa1263500-mRNA-1
chr8_2 three_prime_UTR 66697695 66697791 66697695 ID=Msa1263500-mRNA-1:three_prime_utr;Parent=Msa1263500-mRNA-1
Gene Sequence

>Msa1263500

ATGAATCTAATAAGCACAAACGGAGCAACATGGTGTGATGAGAATGAAAATGAAGATGATCAAAATCGCGGCGGCATGAATCGTGTAACTATGGATGAAGTTGATTTCTTCTCAAATGATAAATCATCATCATCGCCAGAACAACTTGATGATGTTTCAATGAAGAATAATAATAATAATATTAATGAGATTTACGATCCTCATTGCAATCTCCGCGCTGACCATGTCAACACTGGTTTACAACTCCTTATTACTAACACCGGAAGTGATCAATCAATGGTGGATGATGGAACTTCAATAAATGCTGAAGATAAGCGTGCCAAGACTGAACAGACGGAGCAATTGCAAGAGGAGCTTGGAGTGTGTAATAGCAAGAGGAACGAAAGTGTGAATGCAGAGAACCAAAAGCTGAAGGAAATGCTGAGTGACATGAGCAGTAGCTACACAAACTTGCATAAGCGTTTTATGTCCTTAATGCAACAGCAACAGAACCAAACCACAGAACATGATCAGATTGTCAAAGGAAAAGCTGAGGAGAAAGGAGATGGTGTGGTGGCTAGAAAGTTGATGAATGGTCCAGCAGCAGAAGTGGATGATCACCAAGAGCCTGAACCATGCACACCTCAGAACAATCAGAAAGAGCCTGATCCAGACGCATCAGAACTAGTACAACTTTTGGACCGAAGTCAGCTTCCCAGATTAAACCCCTCCAATGCCGCTGATCAAGCAAATGCAGAAGCCACTATGAGAAAAGCACGAGTCTCAGTCCGTGCCCGATCAGAAGCCCACATGATCAATGATGGATGCCAATGGCGAAAATATGGACAAAAAATGGCTAAAGGAAACCCTTGTCCTCGCGCATATTACAGATGCACAATGGCTCTGGGTTGCCCCGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAGATCAATTTTGATAACAACATATGAAGGGACACATAGCCATCCACTCCCACCTGCTGCTATGCCAATGGCATCGACCACCGCAGCTGCTGCTACTGTGTTACTATCTGGGTCAATGTCAAGTGCTGATGGGGTGATGAACCCCAATTTACTAGCCAGAATTCTTCCTAATTGCTCTTCTAGCATGGCCACACTCTCAGCATCAGCACCATTTCCTACTGTGACACTAGACCTTACACGCGACACTACAGATAATAACGGAAATTCTCCTTCCCAATTCCAGCTTGGACAGCCTCAAAACTTTGGATCAGGACAATTACCACAAGTGATTGCACAAGCACTTTATAACCAATCCAAATTCTCCGGCCTTCAAATGTCTCAAGATGTTGGAGGCTCTTCCCAGTTGCATCCAACTCAACAGGCATCATCACTAAGTGCCGCCATCACCGCGGATCCAAACTTCACGGCAGCACTCGCAGCTGCTATCTCCTCCATAATTGGTGCTGCTCCTCCCAGCAACAATAACAGTAATCCCAATATCATCAACAGTGCTACCTACAATCAGTAG

Protein sequence

>Msa1263500

MNLISTNGATWCDENENEDDQNRGGMNRVTMDEVDFFSNDKSSSSPEQLDDVSMKNNNNNINEIYDPHCNLRADHVNTGLQLLITNTGSDQSMVDDGTSINAEDKRAKTEQTEQLQEELGVCNSKRNESVNAENQKLKEMLSDMSSSYTNLHKRFMSLMQQQQNQTTEHDQIVKGKAEEKGDGVVARKLMNGPAAEVDDHQEPEPCTPQNNQKEPDPDASELVQLLDRSQLPRLNPSNAADQANAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDRSILITTYEGTHSHPLPPAAMPMASTTAAAATVLLSGSMSSADGVMNPNLLARILPNCSSSMATLSASAPFPTVTLDLTRDTTDNNGNSPSQFQLGQPQNFGSGQLPQVIAQALYNQSKFSGLQMSQDVGGSSQLHPTQQASSLSAAITADPNFTAALAAAISSIIGAAPPSNNNSNPNIINSATYNQ*