AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1136230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1136230 MtrunA17_Chr7g0217741 94.249 313 14 2 1 313 1 309 0.0 571
Msa1136230 MtrunA17_Chr6g0453471 60.533 375 68 11 1 313 1 357 2.04e-126 365
Msa1136230 MtrunA17_Chr4g0042671 79.661 177 32 2 1 173 1 177 4.22e-100 300
Msa1136230 MtrunA17_Chr8g0349261 64.481 183 62 3 1 180 1 183 2.95e-79 243
Msa1136230 MtrunA17_Chr3g0115821 60.894 179 64 2 1 173 1 179 1.54e-76 238
Msa1136230 MtrunA17_Chr2g0281071 76.923 130 29 1 1 129 1 130 1.51e-75 235
Msa1136230 MtrunA17_Chr4g0048511 75.373 134 32 1 1 133 1 134 1.65e-75 235
Msa1136230 MtrunA17_Chr4g0039971 57.895 190 69 4 1 181 2 189 3.85e-74 231
Msa1136230 MtrunA17_Chr2g0323411 72.388 134 37 0 1 134 1 134 1.15e-72 227
Msa1136230 MtrunA17_Chr1g0203411 62.722 169 56 2 1 168 1 163 1.00e-71 223
Msa1136230 MtrunA17_Chr5g0410961 66.207 145 45 1 1 145 1 141 1.28e-69 220
Msa1136230 MtrunA17_Chr5g0417821 61.842 152 54 1 10 161 5 152 6.72e-68 213
Msa1136230 MtrunA17_Chr5g0395281 53.368 193 80 2 1 183 1 193 3.15e-67 212
Msa1136230 MtrunA17_Chr4g0057031 68.702 131 41 0 1 131 1 131 3.98e-66 208
Msa1136230 MtrunA17_Chr4g0037141 58.750 160 62 1 1 160 1 156 1.08e-65 207
Msa1136230 MtrunA17_Chr5g0434571 71.094 128 37 0 1 128 37 164 1.69e-64 207
Msa1136230 MtrunA17_Chr3g0110351 71.654 127 36 0 1 127 1 127 2.52e-64 205
Msa1136230 MtrunA17_Chr7g0217221 43.893 262 127 6 1 257 1 247 9.58e-64 202
Msa1136230 MtrunA17_Chr3g0103281 69.531 128 39 0 1 128 1 128 2.08e-63 203
Msa1136230 MtrunA17_Chr1g0193371 69.697 132 40 0 1 132 1 132 3.71e-63 204
Msa1136230 MtrunA17_Chr6g0452271 63.158 133 49 0 1 133 1 133 6.16e-63 202
Msa1136230 MtrunA17_Chr1g0193801 63.514 148 51 1 1 148 1 145 1.44e-62 203
Msa1136230 MtrunA17_Chr3g0131121 65.909 132 45 0 1 132 1 132 3.49e-62 199
Msa1136230 MtrunA17_Chr7g0254411 69.600 125 36 1 1 123 1 125 2.12e-61 198
Msa1136230 MtrunA17_Chr4g0060721 53.714 175 70 3 1 175 2 165 2.16e-61 198
Msa1136230 MtrunA17_Chr7g0270891 66.667 132 44 0 1 132 1 132 2.46e-61 199
Msa1136230 MtrunA17_Chr7g0228891 61.806 144 55 0 1 144 1 144 4.45e-61 195
Msa1136230 MtrunA17_Chr8g0385321 65.625 128 44 0 1 128 1 128 6.52e-61 196
Msa1136230 MtrunA17_Chr7g0274581 66.949 118 39 0 1 118 1 118 6.78e-61 193
Msa1136230 MtrunA17_Chr3g0092401 56.627 166 60 3 1 166 2 155 7.54e-61 196
Msa1136230 MtrunA17_Chr1g0211161 47.556 225 103 3 3 212 4 228 8.54e-61 193
Msa1136230 MtrunA17_Chr1g0187761 70.339 118 35 0 1 118 1 118 1.84e-60 193
Msa1136230 MtrunA17_Chr5g0435101 65.600 125 43 0 3 127 2 126 3.89e-60 191
Msa1136230 MtrunA17_Chr7g0261281 71.552 116 33 0 1 116 1 116 4.95e-60 193
Msa1136230 MtrunA17_Chr4g0058631 63.971 136 49 0 1 136 1 136 7.13e-60 195
Msa1136230 MtrunA17_Chr3g0121241 67.742 124 40 0 5 128 35 158 1.19e-59 193
Msa1136230 MtrunA17_Chr1g0167691 72.414 116 32 0 1 116 1 116 1.24e-59 191
Msa1136230 MtrunA17_Chr1g0167661 73.276 116 31 0 1 116 1 116 1.50e-59 191
Msa1136230 MtrunA17_Chr7g0271241 64.138 145 47 1 1 145 1 140 2.43e-59 194
Msa1136230 MtrunA17_Chr4g0068061 70.690 116 34 0 1 116 1 116 2.46e-58 191
Msa1136230 MtrunA17_Chr3g0117091 52.514 179 71 1 1 165 1 179 2.71e-58 191
Msa1136230 MtrunA17_Chr8g0346561 68.644 118 37 0 1 118 1 118 1.62e-57 187
Msa1136230 MtrunA17_Chr7g0275911 68.966 116 36 0 1 116 1 116 2.31e-57 185
Msa1136230 MtrunA17_Chr2g0309911 63.636 121 44 0 6 126 5 125 7.27e-56 183
Msa1136230 MtrunA17_Chr7g0247131 67.742 124 39 1 44 166 10 133 2.32e-55 181
Msa1136230 MtrunA17_Chr6g0453211 69.369 111 34 0 1 111 1 111 4.73e-55 181
Msa1136230 MtrunA17_Chr4g0070611 44.403 268 117 9 1 267 1 237 1.06e-54 180
Msa1136230 MtrunA17_Chr4g0070641 67.227 119 39 0 1 119 1 119 1.55e-54 175
Msa1136230 MtrunA17_Chr1g0194951 62.791 129 48 0 1 129 1 129 3.00e-54 181
Msa1136230 MtrunA17_Chr2g0311221 65.455 110 38 0 2 111 4 113 7.12e-54 179
Msa1136230 MtrunA17_Chr2g0323351 66.949 118 39 0 1 118 1 118 1.04e-53 176
Msa1136230 MtrunA17_Chr7g0264641 56.757 148 60 3 1 145 1 147 2.44e-53 176
Msa1136230 MtrunA17_Chr4g0028311 61.538 130 49 1 1 129 1 130 2.45e-53 177
Msa1136230 MtrunA17_Chr4g0042611 86.364 88 12 0 1 88 1 88 2.91e-53 169
Msa1136230 MtrunA17_Chr2g0330041 50.307 163 71 2 1 153 1 163 5.86e-53 178
Msa1136230 MtrunA17_Chr4g0044421 62.400 125 46 1 3 126 2 126 2.00e-52 171
Msa1136230 MtrunA17_Chr3g0135311 56.643 143 61 1 1 142 1 143 2.50e-52 175
Msa1136230 MtrunA17_Chr8g0387421 61.017 118 46 0 1 118 1 118 6.83e-52 173
Msa1136230 MtrunA17_Chr8g0342521 60.163 123 49 0 1 123 1 123 1.79e-51 173
Msa1136230 MtrunA17_Chr5g0400821 64.957 117 40 1 1 116 1 117 2.44e-51 171
Msa1136230 MtrunA17_Chr1g0152011 64.957 117 40 1 1 116 1 117 2.45e-51 172
Msa1136230 MtrunA17_Chr1g0151941 54.286 140 62 2 1 139 1 139 6.01e-51 169
Msa1136230 MtrunA17_Chr8g0342541 59.350 123 50 0 1 123 1 123 7.68e-51 171
Msa1136230 MtrunA17_Chr2g0327351 67.568 111 35 1 1 110 1 111 2.08e-50 169
Msa1136230 MtrunA17_Chr4g0022931 62.393 117 43 1 1 116 1 117 9.61e-50 166
Msa1136230 MtrunA17_Chr7g0269831 68.103 116 37 0 1 116 1 116 1.59e-49 168
Msa1136230 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 3.36e-49 167
Msa1136230 MtrunA17_Chr1g0203441 68.868 106 33 0 13 118 14 119 3.79e-49 165
Msa1136230 MtrunA17_Chr4g0032401 63.964 111 40 0 12 122 17 127 8.46e-49 166
Msa1136230 MtrunA17_Chr2g0328771 64.815 108 38 0 12 119 20 127 9.96e-49 165
Msa1136230 MtrunA17_Chr4g0022911 60.345 116 45 1 1 115 1 116 1.19e-48 164
Msa1136230 MtrunA17_Chr4g0022901 62.069 116 43 1 1 115 1 116 1.51e-48 163
Msa1136230 MtrunA17_Chr4g0022881 60.526 114 45 0 1 114 1 114 6.95e-47 157
Msa1136230 MtrunA17_Chr4g0054391 61.818 110 41 1 1 109 1 110 8.05e-47 159
Msa1136230 MtrunA17_Chr3g0088461 65.741 108 37 0 9 116 19 126 1.33e-46 160
Msa1136230 MtrunA17_Chr4g0072751 63.063 111 40 1 1 110 1 111 1.90e-46 160
Msa1136230 MtrunA17_Chr8g0342481 50.327 153 65 3 1 142 1 153 4.21e-46 160
Msa1136230 MtrunA17_Chr4g0022891 58.407 113 47 0 1 113 1 113 1.24e-44 152
Msa1136230 MtrunA17_Chr6g0470971 60.714 112 44 0 7 118 9 120 1.52e-44 153
Msa1136230 MtrunA17_Chr4g0055981 53.571 140 64 1 9 148 52 190 7.21e-44 150
Msa1136230 MtrunA17_Chr6g0487491 55.556 126 47 2 1 117 1 126 1.21e-43 150
Msa1136230 MtrunA17_Chr1g0186061 63.107 103 38 0 13 115 21 123 7.87e-43 148
Msa1136230 MtrunA17_Chr1g0168661 63.107 103 38 0 13 115 22 124 1.04e-42 147
Msa1136230 MtrunA17_Chr7g0228231 59.813 107 43 0 12 118 14 120 1.13e-41 143
Msa1136230 MtrunA17_Chr2g0294811 68.478 92 29 0 1 92 1 92 1.79e-41 140
Msa1136230 MtrunA17_Chr8g0343831 59.322 118 44 1 1 118 1 114 3.08e-41 144
Msa1136230 MtrunA17_Chr6g0450101 53.719 121 54 1 1 119 1 121 3.10e-41 142
Msa1136230 MtrunA17_Chr1g0194291 56.140 114 50 0 9 122 18 131 3.58e-41 144
Msa1136230 MtrunA17_Chr1g0209661 57.658 111 47 0 12 122 27 137 3.76e-41 145
Msa1136230 MtrunA17_Chr3g0080861 57.143 112 47 1 10 121 35 145 7.28e-41 149
Msa1136230 MtrunA17_Chr8g0354661 58.491 106 44 0 10 115 35 140 2.84e-40 147
Msa1136230 MtrunA17_Chr1g0194301 54.955 111 50 0 12 122 33 143 3.98e-40 141
Msa1136230 MtrunA17_Chr3g0099131 57.547 106 45 0 10 115 39 144 4.04e-40 147
Msa1136230 MtrunA17_Chr2g0322521 59.813 107 43 0 9 115 26 132 5.02e-40 144
Msa1136230 MtrunA17_Chr7g0240821 46.429 140 73 1 16 153 5 144 7.51e-40 139
Msa1136230 MtrunA17_Chr1g0180391 60.000 105 42 0 12 116 19 123 1.02e-39 139
Msa1136230 MtrunA17_Chr7g0220341 57.273 110 45 1 10 117 23 132 1.06e-38 137
Msa1136230 MtrunA17_Chr5g0434911 54.054 111 51 0 7 117 16 126 1.06e-38 137
Msa1136230 MtrunA17_Chr1g0154031 42.012 169 79 3 12 172 76 233 1.58e-38 140
Msa1136230 MtrunA17_Chr5g0434931 55.140 107 48 0 11 117 34 140 2.11e-38 137
Msa1136230 MtrunA17_Chr5g0434831 56.075 107 47 0 11 117 6 112 4.52e-37 131
Msa1136230 MtrunA17_Chr4g0068921 53.043 115 54 0 8 122 20 134 6.62e-37 130
Msa1136230 MtrunA17_Chr5g0395221 65.909 88 30 0 1 88 1 88 7.21e-37 127
Msa1136230 MtrunA17_Chr2g0323321 58.095 105 43 1 1 105 1 104 1.38e-36 127
Msa1136230 MtrunA17_Chr7g0228991 55.140 107 48 0 11 117 28 134 1.45e-36 132
Msa1136230 MtrunA17_Chr8g0342511 62.069 87 33 0 1 87 1 87 1.60e-36 126
Msa1136230 MtrunA17_Chr2g0293911 53.043 115 54 0 8 122 20 134 1.88e-36 133
Msa1136230 MtrunA17_Chr8g0342531 61.798 89 34 0 1 89 1 89 2.94e-36 128
Msa1136230 MtrunA17_Chr8g0360111 56.863 102 44 0 11 112 24 125 4.54e-36 130
Msa1136230 MtrunA17_Chr2g0327821 53.846 104 48 0 12 115 6 109 9.43e-36 129
Msa1136230 MtrunA17_Chr1g0192411 41.463 164 87 4 1 161 1 158 6.16e-35 130
Msa1136230 MtrunA17_Chr4g0030881 52.727 110 45 1 13 115 8 117 8.18e-35 127
Msa1136230 MtrunA17_Chr5g0434841 53.774 106 49 0 11 116 19 124 1.13e-34 128
Msa1136230 MtrunA17_Chr5g0440781 47.788 113 57 2 13 124 13 124 3.51e-33 120
Msa1136230 MtrunA17_Chr4g0042621 69.663 89 23 2 89 173 15 103 1.19e-32 123
Msa1136230 MtrunA17_Chr5g0441141 47.788 113 57 2 13 124 13 124 1.43e-32 121
Msa1136230 MtrunA17_Chr5g0440761 47.788 113 57 2 13 124 13 124 1.46e-32 121
Msa1136230 MtrunA17_Chr8g0342461 56.667 90 38 1 1 89 1 90 1.67e-32 117
Msa1136230 MtrunA17_Chr8g0342471 56.667 90 38 1 1 89 1 90 5.20e-32 116
Msa1136230 MtrunA17_Chr8g0334881 47.706 109 55 2 12 119 10 117 2.47e-31 119
Msa1136230 MtrunA17_Chr5g0441131 47.414 116 59 2 10 124 7 121 3.47e-31 115
Msa1136230 MtrunA17_Chr4g0013361 49.074 108 54 1 8 114 6 113 2.29e-30 116
Msa1136230 MtrunA17_Chr3g0099141 51.724 87 42 0 8 94 36 122 2.78e-30 112
Msa1136230 MtrunA17_Chr6g0454921 46.847 111 58 1 14 124 15 124 2.79e-30 114
Msa1136230 MtrunA17_Chr3g0093811 60.000 85 34 0 44 128 14 98 3.29e-30 115
Msa1136230 MtrunA17_Chr5g0401731 48.624 109 55 1 14 122 15 122 4.25e-30 116
Msa1136230 MtrunA17_Chr3g0133601 51.402 107 51 1 9 115 32 137 2.17e-29 112
Msa1136230 MtrunA17_Chr4g0008551 47.788 113 54 2 14 126 38 145 3.30e-28 111
Msa1136230 MtrunA17_Chr4g0053431 49.020 102 51 1 14 115 5 105 1.41e-27 108
Msa1136230 MtrunA17_Chr7g0238631 48.571 105 53 1 12 116 111 214 2.22e-26 108
Msa1136230 MtrunA17_Chr5g0429661 49.000 100 48 2 12 110 120 217 5.77e-26 105
Msa1136230 MtrunA17_Chr7g0229101 64.286 70 25 0 44 113 4 73 3.15e-25 100
Msa1136230 MtrunA17_Chr7g0229131 58.108 74 31 0 44 117 4 77 1.50e-24 97.8
Msa1136230 MtrunA17_Chr4g0058991 43.243 111 62 1 8 118 203 312 1.94e-24 102
Msa1136230 MtrunA17_Chr3g0117511 42.342 111 63 1 8 118 177 286 5.60e-24 101
Msa1136230 MtrunA17_Chr5g0434901 61.765 68 26 0 46 113 7 74 2.97e-23 92.4
Msa1136230 MtrunA17_Chr6g0453751 48.913 92 38 2 11 93 19 110 6.60e-23 92.0
Msa1136230 MtrunA17_Chr5g0425591 48.235 85 43 1 10 93 7 91 8.00e-23 90.5
Msa1136230 MtrunA17_Chr6g0480581 38.281 128 70 3 14 137 4 126 3.48e-22 93.2
Msa1136230 MtrunA17_Chr3g0139671 40.952 105 61 1 12 116 83 186 4.74e-22 96.7
Msa1136230 MtrunA17_Chr5g0437321 44.444 99 54 1 14 112 19 116 1.34e-21 92.4
Msa1136230 MtrunA17_Chr6g0460661 38.793 116 69 2 14 129 16 129 2.34e-21 89.0
Msa1136230 MtrunA17_Chr1g0157731 40.000 105 62 1 12 116 89 192 3.55e-21 94.4
Msa1136230 MtrunA17_Chr1g0157731 31.132 106 71 2 14 118 39 143 1.70e-11 65.1
Msa1136230 MtrunA17_Chr6g0460671 32.558 172 108 4 14 184 99 263 5.67e-21 91.7
Msa1136230 MtrunA17_Chr4g0042501 41.739 115 59 3 2 115 98 205 6.60e-21 92.4
Msa1136230 MtrunA17_Chr5g0417621 42.308 104 57 2 14 116 134 235 1.20e-20 91.7
Msa1136230 MtrunA17_Chr7g0228531 39.450 109 64 2 10 118 216 322 3.34e-20 90.5
Msa1136230 MtrunA17_Chr3g0125801 42.157 102 58 1 14 115 16 116 3.38e-20 88.6
Msa1136230 MtrunA17_Chr5g0395231 60.714 56 22 0 78 133 5 60 5.04e-19 84.7
Msa1136230 MtrunA17_Chr7g0254261 41.525 118 62 3 3 115 74 189 5.46e-19 86.3
Msa1136230 MtrunA17_Chr5g0397841 42.857 98 55 1 12 109 108 204 7.64e-19 86.7
Msa1136230 MtrunA17_Chr7g0228401 44.186 86 47 1 25 110 290 374 1.54e-17 82.8
Msa1136230 MtrunA17_Chr1g0177901 47.126 87 42 2 24 110 7 89 5.52e-17 78.2
Msa1136230 MtrunA17_Chr7g0233061 39.623 106 43 2 14 110 180 273 6.49e-17 80.5
Msa1136230 MtrunA17_Chr7g0247141 65.957 47 15 1 1 46 1 47 7.60e-17 73.6
Msa1136230 MtrunA17_Chr7g0238651 35.938 128 70 3 17 140 10 129 1.84e-16 79.0
Msa1136230 MtrunA17_Chr7g0228481 36.634 101 62 2 10 110 216 314 2.98e-16 79.0
Msa1136230 MtrunA17_Chr5g0416341 38.384 99 60 1 17 115 29 126 2.94e-15 75.9
Msa1136230 MtrunA17_Chr1g0193901 51.724 58 27 1 12 68 11 68 5.11e-15 70.1
Msa1136230 MtrunA17_Chr1g0193891 51.724 58 27 1 12 68 11 68 5.11e-15 70.1
Msa1136230 MtrunA17_Chr1g0193871 51.724 58 27 1 12 68 11 68 5.11e-15 70.1
Msa1136230 MtrunA17_Chr1g0193881 51.724 58 27 1 12 68 11 68 5.11e-15 70.1
Msa1136230 MtrunA17_Chr8g0362231 36.364 99 62 1 17 115 25 122 8.17e-14 71.6
Msa1136230 MtrunA17_Chr3g0145551 67.500 40 13 0 92 131 2 41 9.96e-13 63.2
Msa1136230 MtrunA17_Chr5g0434871 58.140 43 18 0 74 116 2 44 1.86e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1136230 AT5G15310.2 60.606 330 98 7 1 313 1 315 6.01e-125 360
Msa1136230 AT5G15310.1 59.941 337 100 7 1 313 1 326 1.50e-124 359
Msa1136230 AT3G01140.2 56.215 354 105 8 1 313 1 345 1.90e-116 340
Msa1136230 AT3G01140.1 55.650 354 107 8 1 313 44 388 2.59e-113 333
Msa1136230 AT5G15310.4 85.876 177 23 2 1 176 1 176 3.02e-106 310
Msa1136230 AT3G61250.1 66.471 170 56 1 1 170 1 169 3.98e-81 248
Msa1136230 AT4G21440.1 75.188 133 33 0 1 133 1 133 4.62e-77 239
Msa1136230 AT5G16770.4 49.402 251 111 4 1 238 1 248 1.47e-76 237
Msa1136230 AT5G16770.3 49.402 251 111 4 1 238 1 248 1.47e-76 237
Msa1136230 AT3G02940.2 75.188 133 33 0 1 133 1 133 1.99e-76 236
Msa1136230 AT4G05100.1 78.462 130 27 1 1 129 1 130 4.59e-76 236
Msa1136230 AT5G16770.1 49.402 251 111 4 1 238 1 248 4.76e-76 236
Msa1136230 AT5G16770.2 49.402 251 111 4 1 238 1 248 4.76e-76 236
Msa1136230 AT3G02940.1 75.188 133 33 0 1 133 1 133 7.69e-76 235
Msa1136230 AT3G02940.3 75.188 133 33 0 1 133 1 133 7.69e-76 235
Msa1136230 AT1G34670.1 75.188 133 33 0 1 133 1 133 6.42e-75 234
Msa1136230 AT4G28110.1 74.419 129 33 0 1 129 1 129 3.38e-73 227
Msa1136230 AT5G10280.1 69.173 133 41 0 1 133 1 133 1.02e-70 223
Msa1136230 AT5G65230.1 70.149 134 40 0 1 134 1 134 1.84e-70 221
Msa1136230 AT4G17785.1 40.000 365 159 11 1 311 1 359 1.00e-69 221
Msa1136230 AT4G17785.2 41.667 336 145 10 1 291 1 330 2.27e-68 217
Msa1136230 AT5G61420.2 73.438 128 34 0 1 128 1 128 6.67e-68 216
Msa1136230 AT5G07690.1 74.219 128 33 0 1 128 1 128 7.31e-68 215
Msa1136230 AT5G60890.1 69.697 132 40 0 1 132 1 132 7.53e-68 214
Msa1136230 AT4G34990.1 70.455 132 39 0 1 132 1 132 2.95e-67 212
Msa1136230 AT4G22680.1 70.229 131 39 0 1 131 1 131 6.67e-67 211
Msa1136230 AT5G54230.1 72.868 129 35 0 1 129 1 129 7.16e-67 212
Msa1136230 AT1G18570.1 66.234 154 44 3 1 147 1 153 1.23e-66 213
Msa1136230 AT4G12350.1 67.153 137 45 0 1 137 1 137 9.44e-66 208
Msa1136230 AT5G07700.1 72.656 128 35 0 1 128 1 128 1.01e-65 210
Msa1136230 AT5G07700.2 72.656 128 35 0 1 128 1 128 1.01e-65 210
Msa1136230 AT5G16600.1 70.992 131 38 0 1 131 1 131 1.05e-65 209
Msa1136230 AT1G74080.1 70.079 127 38 0 1 127 1 127 4.56e-65 208
Msa1136230 AT4G09460.1 68.182 132 42 0 1 132 1 132 1.67e-64 203
Msa1136230 AT5G56110.1 61.333 150 58 0 1 150 1 150 3.52e-64 205
Msa1136230 AT2G31180.1 74.576 118 30 0 1 118 1 118 6.14e-64 202
Msa1136230 AT1G66230.1 69.531 128 39 0 1 128 1 128 7.34e-64 203
Msa1136230 AT2G16720.1 67.424 132 43 0 1 132 1 132 8.53e-64 202
Msa1136230 AT1G57560.1 65.248 141 49 0 1 141 1 141 8.79e-64 204
Msa1136230 AT1G35515.1 63.830 141 47 1 1 137 1 141 1.05e-63 201
Msa1136230 AT1G22640.1 65.672 134 46 0 1 134 1 134 1.22e-63 202
Msa1136230 AT5G26660.1 71.094 128 37 0 1 128 1 128 1.34e-63 205
Msa1136230 AT5G62470.2 55.747 174 58 3 1 166 1 163 2.64e-63 204
Msa1136230 AT1G57560.2 67.939 131 42 0 1 131 1 131 2.98e-63 201
Msa1136230 AT4G38620.1 65.152 132 46 0 1 132 1 132 3.83e-63 201
Msa1136230 AT3G47600.1 54.545 176 64 3 1 166 1 170 3.93e-63 203
Msa1136230 AT3G23250.1 52.821 195 73 2 1 195 1 176 1.96e-62 200
Msa1136230 AT5G62470.1 55.747 174 57 4 1 166 1 162 1.19e-61 200
Msa1136230 AT1G09540.1 66.667 132 44 0 1 132 1 132 2.87e-61 199
Msa1136230 AT1G08810.1 70.492 122 36 0 1 122 1 122 4.12e-61 196
Msa1136230 AT4G01680.3 69.291 127 39 0 1 127 1 127 8.36e-61 194
Msa1136230 AT1G06180.1 73.276 116 31 0 1 116 1 116 1.28e-60 194
Msa1136230 AT3G13540.1 66.400 125 42 0 4 128 15 139 2.94e-60 193
Msa1136230 AT4G01680.1 69.291 127 39 0 1 127 1 127 3.53e-60 196
Msa1136230 AT1G74650.1 48.058 206 78 4 1 190 1 193 3.84e-60 195
Msa1136230 AT1G74430.1 65.152 132 46 0 1 132 1 132 2.90e-59 191
Msa1136230 AT3G28910.1 67.213 122 40 0 1 122 1 122 2.35e-58 190
Msa1136230 AT1G18710.1 64.844 128 45 0 1 128 1 128 4.15e-58 188
Msa1136230 AT5G62320.1 62.406 133 43 1 2 127 3 135 4.75e-58 187
Msa1136230 AT5G14340.1 60.606 132 52 0 1 132 13 144 1.61e-57 187
Msa1136230 AT5G15310.3 49.200 250 92 7 88 313 9 247 7.72e-57 184
Msa1136230 AT1G16490.1 67.241 116 38 0 2 117 4 119 8.65e-57 185
Msa1136230 AT4G01680.2 63.309 139 39 1 1 127 1 139 1.14e-56 187
Msa1136230 AT3G28470.1 65.414 133 46 0 1 133 1 133 1.69e-56 186
Msa1136230 AT1G79180.1 66.667 117 39 0 2 118 4 120 2.54e-56 184
Msa1136230 AT1G56160.1 68.103 116 37 0 2 117 4 119 8.03e-56 183
Msa1136230 AT5G49330.1 68.103 116 37 0 1 116 1 116 9.15e-56 184
Msa1136230 AT3G62610.1 68.103 116 37 0 1 116 1 116 5.91e-55 182
Msa1136230 AT2G47460.1 67.241 116 38 0 1 116 1 116 7.37e-54 180
Msa1136230 AT3G12720.1 61.983 121 46 0 6 126 16 136 2.18e-53 177
Msa1136230 AT1G63910.1 57.143 133 57 0 1 133 1 133 4.72e-52 176
Msa1136230 AT3G13890.2 62.931 116 43 0 1 116 1 116 9.79e-52 174
Msa1136230 AT5G23000.1 64.103 117 41 1 1 116 1 117 7.01e-51 171
Msa1136230 AT3G49690.1 65.812 117 39 1 1 116 1 117 9.43e-51 170
Msa1136230 AT3G12820.1 64.655 116 41 0 3 118 5 120 1.16e-50 168
Msa1136230 AT5G57620.1 63.248 117 42 1 1 116 1 117 3.49e-50 169
Msa1136230 AT1G79180.2 51.333 150 40 1 2 118 4 153 1.36e-49 168
Msa1136230 AT5G65790.1 64.103 117 41 1 1 116 1 117 1.79e-49 169
Msa1136230 AT4G37780.1 61.538 117 44 1 1 116 1 117 2.15e-49 167
Msa1136230 AT2G36890.1 59.055 127 51 1 1 126 1 127 7.64e-49 165
Msa1136230 AT3G13890.1 58.400 125 43 1 1 116 1 125 1.16e-48 166
Msa1136230 AT2G36890.2 59.055 127 51 1 1 126 42 168 1.58e-48 166
Msa1136230 AT5G12870.1 65.741 108 37 0 12 119 18 125 5.82e-48 162
Msa1136230 AT3G08500.1 65.741 108 37 0 9 116 27 134 6.03e-46 159
Msa1136230 AT5G14750.1 63.462 104 38 0 13 116 17 120 9.75e-46 154
Msa1136230 AT5G40330.1 62.500 104 39 0 13 116 13 116 1.09e-44 152
Msa1136230 AT5G35550.1 65.421 107 37 0 12 118 14 120 2.35e-44 152
Msa1136230 AT5G52600.1 52.143 140 58 1 12 142 12 151 5.30e-44 149
Msa1136230 AT3G27920.1 60.952 105 41 0 13 117 15 119 2.18e-43 149
Msa1136230 AT5G40350.1 59.633 109 44 0 12 120 17 125 7.07e-43 147
Msa1136230 AT3G24310.1 62.857 105 39 0 11 115 17 121 1.38e-42 148
Msa1136230 AT1G48000.1 59.292 113 46 0 10 122 30 142 1.99e-42 147
Msa1136230 AT4G25560.1 61.321 106 41 0 13 118 11 116 3.48e-42 147
Msa1136230 AT4G26930.1 52.273 132 52 2 10 141 17 137 4.11e-42 150
Msa1136230 AT4G13480.1 63.107 103 38 0 13 115 7 109 9.32e-42 145
Msa1136230 AT2G26960.1 55.752 113 49 1 9 121 17 128 1.43e-41 149
Msa1136230 AT5G55020.1 59.821 112 44 1 10 121 24 134 1.46e-41 151
Msa1136230 AT5G52260.1 64.151 106 38 0 13 118 13 118 1.64e-41 145
Msa1136230 AT2G32460.1 59.259 108 44 0 8 115 14 121 1.85e-41 150
Msa1136230 AT2G32460.2 60.000 105 42 0 11 115 5 109 2.45e-41 150
Msa1136230 AT5G26660.2 74.419 86 22 0 43 128 12 97 3.78e-41 145
Msa1136230 AT3G27810.1 56.364 110 48 0 12 121 20 129 5.10e-41 142
Msa1136230 AT3G01530.1 59.048 105 43 0 12 116 25 129 5.70e-41 142
Msa1136230 AT3G48920.1 58.095 105 44 0 13 117 19 123 1.30e-40 142
Msa1136230 AT5G06100.1 58.095 105 44 0 11 115 31 135 1.86e-40 147
Msa1136230 AT3G30210.1 60.577 104 41 0 11 114 26 129 2.24e-40 142
Msa1136230 AT3G11440.2 57.692 104 44 0 12 115 41 144 3.15e-40 146
Msa1136230 AT5G06100.5 58.095 105 44 0 11 115 31 135 5.63e-40 147
Msa1136230 AT5G06100.2 58.095 105 44 0 11 115 31 135 5.63e-40 147
Msa1136230 AT5G06100.3 58.095 105 44 0 11 115 31 135 5.63e-40 147
Msa1136230 AT5G06100.4 58.095 105 44 0 11 115 31 135 5.63e-40 147
Msa1136230 AT3G11440.3 57.692 104 44 0 12 115 41 144 8.89e-40 147
Msa1136230 AT3G11440.4 57.692 104 44 0 12 115 41 144 8.89e-40 147
Msa1136230 AT3G11440.1 57.692 104 44 0 12 115 41 144 8.89e-40 147
Msa1136230 AT1G66370.1 56.522 115 46 1 1 115 1 111 1.53e-39 139
Msa1136230 AT1G25340.1 54.783 115 52 0 13 127 19 133 1.61e-39 140
Msa1136230 AT2G47190.1 50.435 115 57 0 8 122 16 130 6.18e-38 136
Msa1136230 AT3G53200.1 58.654 104 43 0 12 115 9 112 9.65e-38 134
Msa1136230 AT1G68320.1 54.955 111 50 0 12 122 19 129 1.04e-37 135
Msa1136230 AT3G06490.1 52.846 123 58 0 8 130 15 137 2.96e-37 135
Msa1136230 AT1G66380.1 60.952 105 41 0 11 115 7 111 1.53e-36 128
Msa1136230 AT3G46130.1 55.238 105 47 0 11 115 8 112 3.21e-36 131
Msa1136230 AT5G59780.3 55.340 103 46 0 13 115 9 111 4.50e-36 130
Msa1136230 AT5G49620.1 51.220 123 60 0 8 130 22 144 5.22e-36 132
Msa1136230 AT1G56650.1 50.000 144 62 2 11 144 7 150 5.35e-36 130
Msa1136230 AT1G66390.1 59.048 105 43 0 11 115 7 111 3.41e-35 128
Msa1136230 AT1G25340.2 52.174 115 50 1 13 127 19 128 8.02e-35 128
Msa1136230 AT3G47600.2 49.242 132 51 3 45 166 39 164 1.21e-34 129
Msa1136230 AT1G25340.3 52.174 115 50 1 13 127 19 128 1.80e-34 128
Msa1136230 AT3G60460.1 49.123 114 56 2 7 119 6 118 7.84e-33 123
Msa1136230 AT5G49620.2 45.985 137 60 1 8 130 22 158 2.47e-32 122
Msa1136230 AT5G14750.3 71.014 69 20 0 48 116 18 86 2.61e-31 115
Msa1136230 AT5G35550.2 72.973 74 20 0 45 118 50 123 2.90e-31 118
Msa1136230 AT3G12820.2 71.831 71 20 0 48 118 2 72 1.33e-30 114
Msa1136230 AT2G26950.1 45.690 116 61 2 9 124 13 126 8.36e-30 117
Msa1136230 AT1G22640.3 61.842 76 29 0 59 134 2 77 8.14e-29 110
Msa1136230 AT5G40350.2 61.842 76 29 0 45 120 5 80 1.82e-28 108
Msa1136230 AT5G59780.2 63.514 74 27 0 42 115 17 90 1.97e-28 109
Msa1136230 AT3G53200.2 65.753 73 25 0 43 115 7 79 2.55e-28 108
Msa1136230 AT3G46130.3 65.278 72 25 0 44 115 9 80 3.31e-28 109
Msa1136230 AT3G46130.4 63.514 74 27 0 42 115 17 90 4.13e-28 109
Msa1136230 AT2G23290.1 50.000 104 51 1 14 117 13 115 1.36e-27 109
Msa1136230 AT1G71030.1 51.579 95 45 1 38 132 7 100 1.42e-27 106
Msa1136230 AT1G71030.2 56.098 82 36 0 51 132 5 86 2.17e-27 105
Msa1136230 AT4G37260.1 48.598 107 54 1 14 120 13 118 2.25e-27 109
Msa1136230 AT1G18960.1 45.902 122 59 4 14 133 10 126 2.36e-27 108
Msa1136230 AT3G27810.2 61.111 72 28 0 45 116 4 75 8.13e-27 104
Msa1136230 AT5G67300.1 46.078 102 54 1 14 115 6 106 1.23e-25 104
Msa1136230 AT5G02320.1 46.667 105 55 1 12 116 125 228 2.05e-25 106
Msa1136230 AT5G02320.2 46.667 105 55 1 12 116 125 228 2.05e-25 106
Msa1136230 AT5G02320.3 46.667 105 55 1 12 116 65 168 2.34e-25 105
Msa1136230 AT2G39880.1 49.020 102 51 1 14 115 50 150 2.92e-25 104
Msa1136230 AT3G09230.1 47.664 107 47 2 14 116 55 156 5.44e-25 103
Msa1136230 AT3G50060.1 45.098 102 55 1 14 115 6 106 6.03e-25 102
Msa1136230 AT5G58850.1 45.370 108 56 2 12 118 103 208 8.18e-25 103
Msa1136230 AT4G18770.1 43.243 111 62 1 8 118 211 320 9.23e-25 103
Msa1136230 AT3G09370.2 46.154 104 55 1 12 115 133 235 1.12e-24 104
Msa1136230 AT3G09370.1 46.154 104 55 1 12 115 128 230 1.17e-24 103
Msa1136230 AT3G09370.3 46.154 104 55 1 12 115 141 243 1.42e-24 103
Msa1136230 AT1G66380.3 66.667 72 24 0 44 115 7 78 1.92e-24 95.9
Msa1136230 AT3G27785.1 46.078 102 54 1 8 109 183 283 2.02e-24 102
Msa1136230 AT5G40360.1 44.762 105 56 2 12 116 156 258 2.09e-24 102
Msa1136230 AT3G23250.2 43.796 137 58 2 59 195 2 119 6.97e-24 97.8
Msa1136230 AT3G55730.1 46.226 106 56 1 14 119 56 160 1.87e-23 99.8
Msa1136230 AT5G11050.1 43.396 106 57 2 14 118 105 208 3.75e-23 99.4
Msa1136230 AT1G17950.1 44.118 102 56 1 14 115 5 105 1.03e-22 95.1
Msa1136230 AT5G14750.4 67.241 58 19 0 59 116 2 59 2.24e-22 91.3
Msa1136230 AT5G14750.2 67.241 58 19 0 59 116 2 59 2.24e-22 91.3
Msa1136230 AT1G66380.2 56.962 79 34 0 11 89 7 85 2.90e-22 90.1
Msa1136230 AT4G32730.1 40.952 105 61 1 12 116 85 188 4.02e-22 97.4
Msa1136230 AT4G32730.1 33.019 106 69 2 14 118 35 139 5.60e-12 67.0
Msa1136230 AT4G32730.5 40.952 105 61 1 12 116 85 188 4.15e-22 97.4
Msa1136230 AT4G32730.5 33.019 106 69 2 14 118 35 139 6.08e-12 67.0
Msa1136230 AT4G32730.4 40.952 105 61 1 12 116 85 188 4.15e-22 97.4
Msa1136230 AT4G32730.4 33.019 106 69 2 14 118 35 139 6.08e-12 67.0
Msa1136230 AT4G32730.3 40.952 105 61 1 12 116 85 188 4.15e-22 97.4
Msa1136230 AT4G32730.3 33.019 106 69 2 14 118 35 139 6.08e-12 67.0
Msa1136230 AT4G32730.2 40.952 105 61 1 12 116 85 188 4.15e-22 97.4
Msa1136230 AT4G32730.2 33.019 106 69 2 14 118 35 139 6.08e-12 67.0
Msa1136230 AT5G11510.3 43.119 109 53 2 12 116 79 182 1.17e-21 95.9
Msa1136230 AT5G11510.1 43.119 109 53 2 12 116 79 182 1.17e-21 95.9
Msa1136230 AT5G11510.4 43.119 109 53 2 12 116 79 182 1.17e-21 95.9
Msa1136230 AT5G11510.2 43.119 109 53 2 12 116 79 182 1.39e-21 95.9
Msa1136230 AT5G11510.5 43.119 109 53 2 12 116 79 182 1.46e-21 95.5
Msa1136230 AT1G73410.1 44.118 102 56 1 14 115 6 106 1.52e-21 91.7
Msa1136230 AT1G73410.2 44.118 102 56 1 14 115 6 106 1.96e-21 90.5
Msa1136230 AT1G69560.1 39.815 108 64 1 9 116 102 208 2.16e-21 93.2
Msa1136230 AT1G69560.2 39.815 108 64 1 9 116 118 224 2.75e-21 93.2
Msa1136230 AT4G33450.1 38.053 113 64 2 3 115 13 119 7.30e-21 90.1
Msa1136230 AT1G26780.1 41.346 104 60 1 12 115 96 198 2.48e-20 89.4
Msa1136230 AT1G26780.2 41.346 104 60 1 12 115 96 198 2.79e-20 90.5
Msa1136230 AT5G61420.1 79.167 48 10 0 81 128 2 49 4.84e-20 88.6
Msa1136230 AT2G25230.1 39.024 123 72 2 4 124 16 137 8.32e-20 87.0
Msa1136230 AT5G17800.1 40.196 102 60 1 14 115 93 193 1.31e-18 85.1
Msa1136230 AT3G29020.1 35.238 105 67 1 14 118 65 168 3.45e-17 79.7
Msa1136230 AT4G28110.2 73.810 42 11 0 88 129 4 45 5.37e-17 78.2
Msa1136230 AT3G29020.2 35.922 103 65 1 14 116 67 168 5.82e-17 80.1
Msa1136230 AT4G00540.2 39.640 111 63 2 12 119 101 210 9.33e-17 80.5
Msa1136230 AT4G00540.1 39.640 111 63 2 12 119 99 208 1.48e-16 80.1
Msa1136230 AT2G02820.3 38.384 99 60 1 17 115 33 130 1.66e-15 76.3
Msa1136230 AT5G39700.1 35.577 104 66 1 15 118 57 159 1.75e-15 73.9
Msa1136230 AT2G02820.1 38.384 99 60 1 17 115 33 130 1.88e-15 77.0
Msa1136230 AT2G02820.2 38.384 99 60 1 17 115 33 130 2.35e-15 76.6
Msa1136230 AT1G74650.3 35.659 129 54 4 78 190 2 117 3.37e-15 74.3
Msa1136230 AT3G28910.2 66.667 45 15 0 78 122 2 46 8.13e-15 73.2
Msa1136230 AT1G14350.2 38.384 99 60 1 17 115 28 125 9.80e-15 74.7
Msa1136230 AT1G14350.1 38.384 99 60 1 17 115 28 125 9.80e-15 74.7
Msa1136230 AT5G40430.1 34.188 117 75 2 4 120 44 158 3.04e-14 71.6
Msa1136230 AT1G22640.2 63.830 47 17 0 88 134 16 62 4.41e-14 70.1
Msa1136230 AT2G37630.1 35.000 100 63 1 17 114 7 106 4.55e-14 72.4
Msa1136230 AT1G74430.2 53.571 56 26 0 77 132 8 63 4.61e-14 70.1
Msa1136230 AT5G59780.1 65.116 43 15 0 73 115 4 46 1.53e-13 68.2
Msa1136230 AT4G25560.2 61.224 49 19 0 70 118 2 50 1.71e-13 68.9
Msa1136230 AT3G46130.2 65.116 43 15 0 73 115 4 46 2.77e-13 67.8
Msa1136230 AT5G14340.2 59.091 44 18 0 88 131 10 53 4.34e-12 64.3

Find 82 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGGATCAATTCCCATTT+TGG 0.170005 7_4:-4488587 None:intergenic
ATTTGTCAGCGCGGCATAAA+AGG 0.209539 7_4:-4486325 None:intergenic
TGTATACTCTAATCTTTATA+TGG 0.242759 7_4:-4486453 None:intergenic
ATTTCATTGTCTGTTCTCTT+AGG 0.271816 7_4:-4488526 None:intergenic
GCTAAGATTTGCAGCATTCT+TGG 0.289751 7_4:-4488653 None:intergenic
TCAAACCAATCAAAAGCTAT+TGG 0.311087 7_4:+4489386 Msa1136230:three_prime_UTR
GTTAGAATTCAAAGATTTGA+TGG 0.315601 7_4:+4488894 Msa1136230:CDS
AAAGAAGAAAATAAATAAAA+TGG 0.317849 7_4:+4489429 Msa1136230:three_prime_UTR
AACTTTCCCCTCTTAATATC+AGG 0.320397 7_4:-4487048 None:intergenic
AAATGCATGAAGTTGAATAA+TGG 0.352752 7_4:-4487091 None:intergenic
ACAATGAAATCAAGAACTAT+TGG 0.380014 7_4:+4488539 Msa1136230:CDS
TAAGATGGACTAATTATCTA+AGG 0.387725 7_4:+4487025 Msa1136230:CDS
GAGAAGTTGGAGGAGAAACT+TGG 0.394993 7_4:-4486428 None:intergenic
ACTTGAAGCTGAAGCAAGAT+TGG 0.402581 7_4:+4488702 Msa1136230:CDS
GTAGAACTAAAAGCCATTGA+TGG 0.406974 7_4:-4488922 None:intergenic
GTCATTGTCGGTTGAGTGCT+TGG 0.407492 7_4:+4489517 Msa1136230:three_prime_UTR
TCTTTATATGGTGGAGAAGT+TGG 0.409046 7_4:-4486441 None:intergenic
TGATCTTCCTCAGGTGTCCA+TGG 0.411631 7_4:-4486557 None:intergenic
TGTTTCTGTAGACAAGTTGA+TGG 0.425864 7_4:+4489575 Msa1136230:three_prime_UTR
GAAAAGGTTGGTTTAAAGAA+AGG 0.426041 7_4:+4486533 Msa1136230:CDS
AAGAAGAAGGTGAGAAAGAG+TGG 0.428852 7_4:+4488845 Msa1136230:CDS
TGGAAGAGAAAGAGAAAGAA+AGG 0.429608 7_4:-4486408 None:intergenic
TTCATTAGAACATTTCCAAT+GGG 0.430704 7_4:+4486494 Msa1136230:exon
ATCTAAGGCCTGATATTAAG+AGG 0.433219 7_4:+4487040 Msa1136230:CDS
ATCTTAGCCACAAGGCTCAA+TGG 0.433665 7_4:+4488668 Msa1136230:CDS
CGTTCTTTGCCTACAAAAGC+TGG 0.434834 7_4:+4486623 Msa1136230:CDS
AAGAACATGGCCATGGAAGC+TGG 0.442669 7_4:+4486600 Msa1136230:CDS
TCTTAGCCACAAGGCTCAAT+GGG 0.448848 7_4:+4488669 Msa1136230:CDS
CGCTCTCCGGTGACAAACTC+AGG 0.450060 7_4:-4489026 None:intergenic
ATGAAGATAACAAGAACTAC+TGG 0.460330 7_4:+4489103 Msa1136230:CDS
AAAAGGTTGGTTTAAAGAAA+GGG 0.462253 7_4:+4486534 Msa1136230:CDS
CACTTTCCCATTGAGCCTTG+TGG 0.471844 7_4:-4488675 None:intergenic
CAATTGCAACAGCATCAACT+TGG 0.472770 7_4:+4488748 Msa1136230:CDS
TATTATTAGAGCTTGAACAT+AGG 0.488378 7_4:-4489638 None:intergenic
TGTACAAGAATTTAATGAGA+TGG 0.501135 7_4:-4486358 None:intergenic
TTTGTCAGCGCGGCATAAAA+GGG 0.505818 7_4:-4486324 None:intergenic
ATGGTTGTGAAATTAAGTTA+TGG 0.506421 7_4:+4489448 Msa1136230:three_prime_UTR
GCAAAGAACGCCAGCTTCCA+TGG 0.506780 7_4:-4486610 None:intergenic
TTTGATGGAGAATCCATCAA+TGG 0.510092 7_4:+4488909 Msa1136230:CDS
GTAAGAAAGCAATTCAATCA+TGG 0.514050 7_4:+4489476 Msa1136230:three_prime_UTR
GATTTGCAGCATTCTTGGAA+TGG 0.519998 7_4:-4488648 None:intergenic
GCAAGAGCTGCAGACTAAGA+TGG 0.520053 7_4:+4487010 Msa1136230:CDS
GTACTTAGTATTAAAGAAGA+AGG 0.522047 7_4:+4488832 Msa1136230:CDS
GTACAAGAATTTAATGAGAT+GGG 0.526689 7_4:-4486357 None:intergenic
GATGGAAGTGGTAGCGGCGG+TGG 0.528157 7_4:+4489069 Msa1136230:CDS
ACTTGTGATGGAAGTGGTAG+CGG 0.531173 7_4:+4489063 Msa1136230:CDS
AACGATCAGTGTTGCTGAGG+AGG 0.534126 7_4:+4488963 Msa1136230:CDS
TTACACTCTCCACCGCTCTC+CGG 0.544259 7_4:-4489039 None:intergenic
TTTCATTAGAACATTTCCAA+TGG 0.549227 7_4:+4486493 Msa1136230:exon
TCACCATGTTGTGAAAAGGT+TGG 0.557617 7_4:+4486521 Msa1136230:CDS
CAACATGGTGATCTCCCCAT+TGG 0.561281 7_4:-4486509 None:intergenic
TATCAACGAAAATTAGAGAC+GGG 0.565294 7_4:-4489292 None:intergenic
ATACTCTAATCTTTATATGG+TGG 0.567647 7_4:-4486450 None:intergenic
TTGCTTGATAATTCTAACTC+CGG 0.569468 7_4:+4489000 Msa1136230:CDS
TTATATGGTGGAGAAGTTGG+AGG 0.574757 7_4:-4486438 None:intergenic
TTATCGATAGAAATTAGTGA+TGG 0.577496 7_4:+4489198 Msa1136230:three_prime_UTR
TCTAAGGCCTGATATTAAGA+GGG 0.578462 7_4:+4487041 Msa1136230:CDS
CGGTGACCTGAGTTTGTCAC+CGG 0.586084 7_4:+4489020 Msa1136230:CDS
CGGTGACAAACTCAGGTCAC+CGG 0.587763 7_4:-4489019 None:intergenic
GGAGAGTGTAATACTTGTGA+TGG 0.589020 7_4:+4489051 Msa1136230:CDS
TTATCTTACATTGAAGAACA+TGG 0.592250 7_4:+4486587 Msa1136230:CDS
GAGATCACCATGTTGTGAAA+AGG 0.593939 7_4:+4486517 Msa1136230:CDS
GTAGATGATGAAGGTTGTGA+TGG 0.594359 7_4:-4488790 None:intergenic
ACGATCAGTGTTGCTGAGGA+GGG 0.594372 7_4:+4488964 Msa1136230:CDS
TTTGCAGGACTTGAGAGGTG+TGG 0.597250 7_4:+4486988 Msa1136230:intron
GATGATGATGTAGATGATGA+AGG 0.598426 7_4:-4488799 None:intergenic
GAAGGTGAGAAAGAGTGGAA+AGG 0.602261 7_4:+4488850 Msa1136230:CDS
TGTAATACTTGTGATGGAAG+TGG 0.616978 7_4:+4489057 Msa1136230:CDS
TACATTGAAGAACATGGCCA+TGG 0.619145 7_4:+4486593 Msa1136230:CDS
GACAACGATCAGTGTTGCTG+AGG 0.620021 7_4:+4488960 Msa1136230:CDS
CTGAGTTTGTCACCGGAGAG+CGG 0.623921 7_4:+4489027 Msa1136230:CDS
TTGGTTTAAAGAAAGGGCCA+TGG 0.628472 7_4:+4486540 Msa1136230:CDS
TTATCAACGAAAATTAGAGA+CGG 0.629339 7_4:-4489293 None:intergenic
TGCTGCAAATCTTAGCCACA+AGG 0.636234 7_4:+4488660 Msa1136230:CDS
CTAAGGCCTGATATTAAGAG+GGG 0.648811 7_4:+4487042 Msa1136230:CDS
TCATTAGAACATTTCCAATG+GGG 0.660394 7_4:+4486495 Msa1136230:exon
AGTTTGTCACCGGAGAGCGG+TGG 0.663951 7_4:+4489030 Msa1136230:CDS
GAAAGGGCCATGGACACCTG+AGG 0.673311 7_4:+4486550 Msa1136230:CDS
TGTGATGGAAGTGGTAGCGG+CGG 0.710359 7_4:+4489066 Msa1136230:CDS
CAGAGAAGAATTTGTCAGCG+CGG 0.716275 7_4:-4486334 None:intergenic
TGTTCTCTTAGGCAAACGAG+TGG 0.724633 7_4:-4488515 None:intergenic
TCAATATAAATCATTATACG+AGG 0.734219 7_4:-4486278 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATACTTTATTTAGAAATA+TGG - chr7_4:4487166-4487185 None:intergenic 10.0%
!!! AAGTATTTTGATTTTAAATT+AGG + chr7_4:4487178-4487197 Msa1136230:intron 10.0%
!!! AGTATTTTGATTTTAAATTA+GGG + chr7_4:4487179-4487198 Msa1136230:intron 10.0%
!!! ATAGTATTTTAATTTATGAA+TGG + chr7_4:4488342-4488361 Msa1136230:intron 10.0%
!! AAAGAAGAAAATAAATAAAA+TGG + chr7_4:4489429-4489448 Msa1136230:three_prime_UTR 10.0%
!!! TTTTATGTTTATGAAAAACA+TGG - chr7_4:4487296-4487315 None:intergenic 15.0%
!!! TTTTTGCTAATAAGAATTTA+GGG - chr7_4:4488412-4488431 None:intergenic 15.0%
!!! TTTTTTGCTAATAAGAATTT+AGG - chr7_4:4488413-4488432 None:intergenic 15.0%
!! TAAAAAAAGATTAACCAAAA+TGG + chr7_4:4488573-4488592 Msa1136230:CDS 15.0%
!! AAAAAAAGATTAACCAAAAT+GGG + chr7_4:4488574-4488593 Msa1136230:CDS 15.0%
!!! TTTTCTAATTATTAGAACAT+TGG - chr7_4:4489171-4489190 None:intergenic 15.0%
!! TCAATATAAATCATTATACG+AGG - chr7_4:4486281-4486300 None:intergenic 20.0%
!! TGTATACTCTAATCTTTATA+TGG - chr7_4:4486456-4486475 None:intergenic 20.0%
!!! AATTGGTTTTTTTTTTTTGC+AGG + chr7_4:4486973-4486992 Msa1136230:intron 20.0%
!! CGATGAAAAAAAATATCAAA+TGG - chr7_4:4487378-4487397 None:intergenic 20.0%
!!! TTTTCCAATAATAGAATGAT+AGG - chr7_4:4487406-4487425 None:intergenic 20.0%
!! CTAGTACTAATAAAATATCA+AGG - chr7_4:4487575-4487594 None:intergenic 20.0%
!!! AGTTTTCATACTTAAAAACT+TGG + chr7_4:4487593-4487612 Msa1136230:intron 20.0%
!! TGTCAAAAGCAAATAAATTA+TGG - chr7_4:4487639-4487658 None:intergenic 20.0%
!!! ATGAAATATGATTTCCTTTT+TGG + chr7_4:4487873-4487892 Msa1136230:intron 20.0%
!! AAATTTATTAACCACCAAAA+AGG - chr7_4:4487890-4487909 None:intergenic 20.0%
!!! AACTTTATTTCAGTTCTTTT+TGG - chr7_4:4487979-4487998 None:intergenic 20.0%
!!! TTCTTTTTTATTCGGTTTAA+CGG - chr7_4:4488039-4488058 None:intergenic 20.0%
!! CAATTCAGTTTATATTCTTT+CGG + chr7_4:4488101-4488120 Msa1136230:intron 20.0%
!!! GGGTTTTTGATTTTTTTTAA+CGG + chr7_4:4488126-4488145 Msa1136230:intron 20.0%
!! ATTGATCTTAATATGAAATC+AGG - chr7_4:4488239-4488258 None:intergenic 20.0%
!! TAATTTATGAATGGATGTTA+AGG + chr7_4:4488351-4488370 Msa1136230:intron 20.0%
!!! TTTTTTTTGTCCTATACTTT+AGG + chr7_4:4488479-4488498 Msa1136230:intron 20.0%
!!! ATAATTCAACTTTTTAGTGT+TGG + chr7_4:4489312-4489331 Msa1136230:three_prime_UTR 20.0%
!! ATGGATTTCTGTTAAAAAAT+AGG + chr7_4:4489495-4489514 Msa1136230:three_prime_UTR 20.0%
! GTACAAGAATTTAATGAGAT+GGG - chr7_4:4486360-4486379 None:intergenic 25.0%
! TGTACAAGAATTTAATGAGA+TGG - chr7_4:4486361-4486380 None:intergenic 25.0%
! ATACTCTAATCTTTATATGG+TGG - chr7_4:4486453-4486472 None:intergenic 25.0%
! TTTCATTAGAACATTTCCAA+TGG + chr7_4:4486493-4486512 Msa1136230:exon 25.0%
! TTCATTAGAACATTTCCAAT+GGG + chr7_4:4486494-4486513 Msa1136230:exon 25.0%
!!! AAAAGGTTGGTTTAAAGAAA+GGG + chr7_4:4486534-4486553 Msa1136230:CDS 25.0%
! TTATCTTACATTGAAGAACA+TGG + chr7_4:4486587-4486606 Msa1136230:CDS 25.0%
! TTTAGTGTAATCATATGTGT+CGG + chr7_4:4486825-4486844 Msa1136230:intron 25.0%
! CAATTTCTTACGATCTTTAA+CGG - chr7_4:4486958-4486977 None:intergenic 25.0%
!!! TAAGATGGACTAATTATCTA+AGG + chr7_4:4487025-4487044 Msa1136230:CDS 25.0%
! AAATGCATGAAGTTGAATAA+TGG - chr7_4:4487094-4487113 None:intergenic 25.0%
!! ATTCAACTTCATGCATTTTT+AGG + chr7_4:4487096-4487115 Msa1136230:CDS 25.0%
! ATGAAAAACATGGAAAAATG+CGG - chr7_4:4487286-4487305 None:intergenic 25.0%
! TCTTCCTATCATTCTATTAT+TGG + chr7_4:4487399-4487418 Msa1136230:intron 25.0%
!! CACAATTACAACAACAATTT+TGG + chr7_4:4487464-4487483 Msa1136230:intron 25.0%
!! TAGAGCATGATTTTAAATTG+CGG - chr7_4:4487504-4487523 None:intergenic 25.0%
! TTTCATACTTAAAAACTTGG+AGG + chr7_4:4487596-4487615 Msa1136230:intron 25.0%
!! ATTCTATCCTTTTGCATTTA+AGG - chr7_4:4487811-4487830 None:intergenic 25.0%
! TTCATGAACCAATGATTATT+TGG - chr7_4:4487858-4487877 None:intergenic 25.0%
!! AAATATGATTTCCTTTTTGG+TGG + chr7_4:4487876-4487895 Msa1136230:intron 25.0%
!!! TATTTCAGTTCTTTTTGGTT+CGG - chr7_4:4487974-4487993 None:intergenic 25.0%
!!! CAATTCGGTTCTTTTTTATT+CGG - chr7_4:4488047-4488066 None:intergenic 25.0%
! ATGAATTGTCTATCACAATT+CGG - chr7_4:4488062-4488081 None:intergenic 25.0%
! AATTATCCGAATCGAATATT+TGG - chr7_4:4488153-4488172 None:intergenic 25.0%
!!! ATTCGATTCGGATAATTTTT+TGG + chr7_4:4488156-4488175 Msa1136230:intron 25.0%
!!! TTCGATTCGGATAATTTTTT+GGG + chr7_4:4488157-4488176 Msa1136230:intron 25.0%
! ACAATGAAATCAAGAACTAT+TGG + chr7_4:4488539-4488558 Msa1136230:CDS 25.0%
! GTACTTAGTATTAAAGAAGA+AGG + chr7_4:4488832-4488851 Msa1136230:CDS 25.0%
! GTTAGAATTCAAAGATTTGA+TGG + chr7_4:4488894-4488913 Msa1136230:CDS 25.0%
! TTATCGATAGAAATTAGTGA+TGG + chr7_4:4489198-4489217 Msa1136230:three_prime_UTR 25.0%
! TTATCAACGAAAATTAGAGA+CGG - chr7_4:4489296-4489315 None:intergenic 25.0%
! ATGGTTGTGAAATTAAGTTA+TGG + chr7_4:4489448-4489467 Msa1136230:three_prime_UTR 25.0%
! GTTAAAAAATAGGTCATTGT+CGG + chr7_4:4489505-4489524 Msa1136230:three_prime_UTR 25.0%
! TATTATTAGAGCTTGAACAT+AGG - chr7_4:4489641-4489660 None:intergenic 25.0%
TCATTAGAACATTTCCAATG+GGG + chr7_4:4486495-4486514 Msa1136230:exon 30.0%
!! GAAAAGGTTGGTTTAAAGAA+AGG + chr7_4:4486533-4486552 Msa1136230:CDS 30.0%
! GTTAAATTACCAGCTTTTGT+AGG - chr7_4:4486635-4486654 None:intergenic 30.0%
CGTTAAAGATCGTAAGAAAT+TGG + chr7_4:4486956-4486975 Msa1136230:intron 30.0%
! AGATCTAAAGAGTGTATACA+TGG - chr7_4:4487355-4487374 None:intergenic 30.0%
!!! TAGTCCATAGTTTTAACTTG+CGG + chr7_4:4487433-4487452 Msa1136230:intron 30.0%
TGTTGTTGTAATTGTGATAG+CGG - chr7_4:4487460-4487479 None:intergenic 30.0%
AAAAGTAGCAAAGATCTTGA+TGG - chr7_4:4487547-4487566 None:intergenic 30.0%
! GGATTAGAATTTTCTGTTCA+AGG - chr7_4:4487709-4487728 None:intergenic 30.0%
TAAAGAATCTGTTGGAAATG+TGG - chr7_4:4487730-4487749 None:intergenic 30.0%
! TAAATTTTGAACATGGCTGT+GGG - chr7_4:4487758-4487777 None:intergenic 30.0%
! CAGAGAGTAAATTTTGAACA+TGG - chr7_4:4487765-4487784 None:intergenic 30.0%
TCTGACACCCAATTTAATTA+AGG + chr7_4:4487781-4487800 Msa1136230:intron 30.0%
AGGACCACCTTAATTAAATT+GGG - chr7_4:4487791-4487810 None:intergenic 30.0%
AAGGACCACCTTAATTAAAT+TGG - chr7_4:4487792-4487811 None:intergenic 30.0%
!!! TTCTTTTTGGTTCGGTTTAA+CGG - chr7_4:4487966-4487985 None:intergenic 30.0%
TCAGTTTATATTCTTTCGGT+AGG + chr7_4:4488105-4488124 Msa1136230:intron 30.0%
CAGTTTATATTCTTTCGGTA+GGG + chr7_4:4488106-4488125 Msa1136230:intron 30.0%
! TAATAAGAATTTAGGGTGAG+GGG - chr7_4:4488405-4488424 None:intergenic 30.0%
! CTAATAAGAATTTAGGGTGA+GGG - chr7_4:4488406-4488425 None:intergenic 30.0%
! TTTTTGTCCTATACTTTAGG+TGG + chr7_4:4488482-4488501 Msa1136230:intron 30.0%
ATTTCATTGTCTGTTCTCTT+AGG - chr7_4:4488529-4488548 None:intergenic 30.0%
!!! GGAAAAAGGGTTTCATTTTT+TGG - chr7_4:4488622-4488641 None:intergenic 30.0%
! TTGCTTGATAATTCTAACTC+CGG + chr7_4:4489000-4489019 Msa1136230:CDS 30.0%
ATGAAGATAACAAGAACTAC+TGG + chr7_4:4489103-4489122 Msa1136230:CDS 30.0%
! AATTTTTGTGTCGTGCTAAA+CGG + chr7_4:4489241-4489260 Msa1136230:three_prime_UTR 30.0%
TATCAACGAAAATTAGAGAC+GGG - chr7_4:4489295-4489314 None:intergenic 30.0%
TCAAACCAATCAAAAGCTAT+TGG + chr7_4:4489386-4489405 Msa1136230:three_prime_UTR 30.0%
! GAAAACCAATAGCTTTTGAT+TGG - chr7_4:4489394-4489413 None:intergenic 30.0%
GTAAGAAAGCAATTCAATCA+TGG + chr7_4:4489476-4489495 Msa1136230:three_prime_UTR 30.0%
TGGAAGAGAAAGAGAAAGAA+AGG - chr7_4:4486411-4486430 None:intergenic 35.0%
! TCTTTATATGGTGGAGAAGT+TGG - chr7_4:4486444-4486463 None:intergenic 35.0%
! AAACCAACCTTTTCACAACA+TGG - chr7_4:4486527-4486546 None:intergenic 35.0%
TATAGTTCTTCCCTCCAAAA+TGG + chr7_4:4486700-4486719 Msa1136230:intron 35.0%
!! GCACATACACTCTTTTGATT+AGG - chr7_4:4486898-4486917 None:intergenic 35.0%
!!! TTTTTTTTGCAGGACTTGAG+AGG + chr7_4:4486983-4487002 Msa1136230:intron 35.0%
! ATCTAAGGCCTGATATTAAG+AGG + chr7_4:4487040-4487059 Msa1136230:CDS 35.0%
! TCTAAGGCCTGATATTAAGA+GGG + chr7_4:4487041-4487060 Msa1136230:CDS 35.0%
AACTTTCCCCTCTTAATATC+AGG - chr7_4:4487051-4487070 None:intergenic 35.0%
!! TTCATGCATTTTTAGGCAAC+AGG + chr7_4:4487103-4487122 Msa1136230:CDS 35.0%
TCAGAATCTCTTAAATGCCA+TGG + chr7_4:4487672-4487691 Msa1136230:intron 35.0%
GGGTACAATAAAGAATCTGT+TGG - chr7_4:4487738-4487757 None:intergenic 35.0%
! GTAAATTTTGAACATGGCTG+TGG - chr7_4:4487759-4487778 None:intergenic 35.0%
GACACCCAATTTAATTAAGG+TGG + chr7_4:4487784-4487803 Msa1136230:intron 35.0%
TCACCAAGCCAAATAATCAT+TGG + chr7_4:4487847-4487866 Msa1136230:intron 35.0%
GAACCAATGATTATTTGGCT+TGG - chr7_4:4487853-4487872 None:intergenic 35.0%
TTCGGTTTAACGGTTCAATT+TGG - chr7_4:4487956-4487975 None:intergenic 35.0%
TTCGGTTTAACGGTTCAATT+TGG - chr7_4:4487956-4487975 None:intergenic 35.0%
AACGGTCCAAATATTCGATT+CGG + chr7_4:4488144-4488163 Msa1136230:intron 35.0%
ATGAAATCAGGACTATTCGT+GGG - chr7_4:4488227-4488246 None:intergenic 35.0%
TATGAAATCAGGACTATTCG+TGG - chr7_4:4488228-4488247 None:intergenic 35.0%
! GCTAATAAGAATTTAGGGTG+AGG - chr7_4:4488407-4488426 None:intergenic 35.0%
! TTGATGACCACCTAAAGTAT+AGG - chr7_4:4488492-4488511 None:intergenic 35.0%
! AACAGGATCAATTCCCATTT+TGG - chr7_4:4488590-4488609 None:intergenic 35.0%
!!! TTTTTTGGCTTGTGTGTAAC+AGG - chr7_4:4488607-4488626 None:intergenic 35.0%
!! GGAATGGTTTTCAGGAAAAA+GGG - chr7_4:4488635-4488654 None:intergenic 35.0%
!! TGGAATGGTTTTCAGGAAAA+AGG - chr7_4:4488636-4488655 None:intergenic 35.0%
! GATGATGATGTAGATGATGA+AGG - chr7_4:4488802-4488821 None:intergenic 35.0%
TTTGATGGAGAATCCATCAA+TGG + chr7_4:4488909-4488928 Msa1136230:CDS 35.0%
GTAGAACTAAAAGCCATTGA+TGG - chr7_4:4488925-4488944 None:intergenic 35.0%
! TGTAATACTTGTGATGGAAG+TGG + chr7_4:4489057-4489076 Msa1136230:CDS 35.0%
! TGTTTCTGTAGACAAGTTGA+TGG + chr7_4:4489575-4489594 Msa1136230:three_prime_UTR 35.0%
! GTGTGTGACTTTTTACTTGT+TGG + chr7_4:4489608-4489627 Msa1136230:three_prime_UTR 35.0%
! TTATATGGTGGAGAAGTTGG+AGG - chr7_4:4486441-4486460 None:intergenic 40.0%
GAGATCACCATGTTGTGAAA+AGG + chr7_4:4486517-4486536 Msa1136230:CDS 40.0%
TCACCATGTTGTGAAAAGGT+TGG + chr7_4:4486521-4486540 Msa1136230:CDS 40.0%
TTGGTTTAAAGAAAGGGCCA+TGG + chr7_4:4486540-4486559 Msa1136230:CDS 40.0%
! AAGAGCTTTTGATCTTCCTC+AGG - chr7_4:4486569-4486588 None:intergenic 40.0%
TACATTGAAGAACATGGCCA+TGG + chr7_4:4486593-4486612 Msa1136230:CDS 40.0%
TTCTTCCCTCCAAAATGGAT+GGG + chr7_4:4486705-4486724 Msa1136230:intron 40.0%
! TGTATCCCATCCATTTTGGA+GGG - chr7_4:4486713-4486732 None:intergenic 40.0%
GTCTGCATTTGTGCTTCATA+GGG - chr7_4:4486736-4486755 None:intergenic 40.0%
TGTCTGCATTTGTGCTTCAT+AGG - chr7_4:4486737-4486756 None:intergenic 40.0%
! ATCCTCTACAGTCGACTTTA+TGG - chr7_4:4486929-4486948 None:intergenic 40.0%
!! CTTACGATCTTTAACGGACT+AGG - chr7_4:4486952-4486971 None:intergenic 40.0%
CTAAGGCCTGATATTAAGAG+GGG + chr7_4:4487042-4487061 Msa1136230:CDS 40.0%
!! GCATTTTTAGGCAACAGGTT+TGG + chr7_4:4487108-4487127 Msa1136230:intron 40.0%
! AAGAGTGTATACATGGCTCA+TGG - chr7_4:4487348-4487367 None:intergenic 40.0%
GCAAAGATCTTGATGGAGTT+TGG - chr7_4:4487540-4487559 None:intergenic 40.0%
TCAAGGAAATTGAGATGCCA+TGG - chr7_4:4487692-4487711 None:intergenic 40.0%
AGGTGGTCCTTAAATGCAAA+AGG + chr7_4:4487801-4487820 Msa1136230:intron 40.0%
!! TTTGGCTTGGTGAGAAAGAA+TGG - chr7_4:4487840-4487859 None:intergenic 40.0%
! GCATTCTTGGAATGGTTTTC+AGG - chr7_4:4488643-4488662 None:intergenic 40.0%
GATTTGCAGCATTCTTGGAA+TGG - chr7_4:4488651-4488670 None:intergenic 40.0%
GCTAAGATTTGCAGCATTCT+TGG - chr7_4:4488656-4488675 None:intergenic 40.0%
ACTTGAAGCTGAAGCAAGAT+TGG + chr7_4:4488702-4488721 Msa1136230:CDS 40.0%
CAATTGCAACAGCATCAACT+TGG + chr7_4:4488748-4488767 Msa1136230:CDS 40.0%
GTAGATGATGAAGGTTGTGA+TGG - chr7_4:4488793-4488812 None:intergenic 40.0%
AAGAAGAAGGTGAGAAAGAG+TGG + chr7_4:4488845-4488864 Msa1136230:CDS 40.0%
! GGAGAGTGTAATACTTGTGA+TGG + chr7_4:4489051-4489070 Msa1136230:CDS 40.0%
TTTGTCAGCGCGGCATAAAA+GGG - chr7_4:4486327-4486346 None:intergenic 45.0%
ATTTGTCAGCGCGGCATAAA+AGG - chr7_4:4486328-4486347 None:intergenic 45.0%
CAGAGAAGAATTTGTCAGCG+CGG - chr7_4:4486337-4486356 None:intergenic 45.0%
GAGAAGTTGGAGGAGAAACT+TGG - chr7_4:4486431-4486450 None:intergenic 45.0%
CGTTCTTTGCCTACAAAAGC+TGG + chr7_4:4486623-4486642 Msa1136230:CDS 45.0%
GTTCTTCCCTCCAAAATGGA+TGG + chr7_4:4486704-4486723 Msa1136230:intron 45.0%
! GTGTATCCCATCCATTTTGG+AGG - chr7_4:4486714-4486733 None:intergenic 45.0%
! AGGGTGTATCCCATCCATTT+TGG - chr7_4:4486717-4486736 None:intergenic 45.0%
CACGAATACCGAACATGACA+CGG + chr7_4:4486755-4486774 Msa1136230:intron 45.0%
CACCATAAAGTCGACTGTAG+AGG + chr7_4:4486924-4486943 Msa1136230:intron 45.0%
! TGCTATCACAACCGCAGTTT+TGG + chr7_4:4487260-4487279 Msa1136230:intron 45.0%
GAAAAATGCGGCCAAAACTG+CGG - chr7_4:4487274-4487293 None:intergenic 45.0%
CGGACCGCAAGTTAAAACTA+TGG - chr7_4:4487440-4487459 None:intergenic 45.0%
GGTCATCTCTAGCACAAACT+CGG + chr7_4:4488372-4488391 Msa1136230:intron 45.0%
! AAGAATTTAGGGTGAGGGGA+TGG - chr7_4:4488401-4488420 None:intergenic 45.0%
TGTTCTCTTAGGCAAACGAG+TGG - chr7_4:4488518-4488537 None:intergenic 45.0%
TGCTGCAAATCTTAGCCACA+AGG + chr7_4:4488660-4488679 Msa1136230:CDS 45.0%
ATCTTAGCCACAAGGCTCAA+TGG + chr7_4:4488668-4488687 Msa1136230:CDS 45.0%
TCTTAGCCACAAGGCTCAAT+GGG + chr7_4:4488669-4488688 Msa1136230:CDS 45.0%
GAAGGTGAGAAAGAGTGGAA+AGG + chr7_4:4488850-4488869 Msa1136230:CDS 45.0%
! ACTTGTGATGGAAGTGGTAG+CGG + chr7_4:4489063-4489082 Msa1136230:CDS 45.0%
CAACATGGTGATCTCCCCAT+TGG - chr7_4:4486512-4486531 None:intergenic 50.0%
TGATCTTCCTCAGGTGTCCA+TGG - chr7_4:4486560-4486579 None:intergenic 50.0%
AAGAACATGGCCATGGAAGC+TGG + chr7_4:4486600-4486619 Msa1136230:CDS 50.0%
GTCAGTGTCCGTGTCATGTT+CGG - chr7_4:4486766-4486785 None:intergenic 50.0%
TGAGATTCGTAACCGTGTCG+TGG - chr7_4:4486792-4486811 None:intergenic 50.0%
!! CATATGTGTCGGTGTCGTGT+TGG + chr7_4:4486836-4486855 Msa1136230:intron 50.0%
GATTAGGCGTTTCCCAGTGT+CGG - chr7_4:4486882-4486901 None:intergenic 50.0%
TTTGCAGGACTTGAGAGGTG+TGG + chr7_4:4486988-4487007 Msa1136230:intron 50.0%
GCAAGAGCTGCAGACTAAGA+TGG + chr7_4:4487010-4487029 Msa1136230:CDS 50.0%
CTGCGGTTGTGATAGCATTG+AGG - chr7_4:4487257-4487276 None:intergenic 50.0%
CACTTTCCCATTGAGCCTTG+TGG - chr7_4:4488678-4488697 None:intergenic 50.0%
! GACAACGATCAGTGTTGCTG+AGG + chr7_4:4488960-4488979 Msa1136230:CDS 50.0%
! AACGATCAGTGTTGCTGAGG+AGG + chr7_4:4488963-4488982 Msa1136230:CDS 50.0%
! ACGATCAGTGTTGCTGAGGA+GGG + chr7_4:4488964-4488983 Msa1136230:CDS 50.0%
! GTCATTGTCGGTTGAGTGCT+TGG + chr7_4:4489517-4489536 Msa1136230:three_prime_UTR 50.0%
GCAAAGAACGCCAGCTTCCA+TGG - chr7_4:4486613-4486632 None:intergenic 55.0%
!! TGTCGGTGTCGTGTTGGTCT+CGG + chr7_4:4486842-4486861 Msa1136230:intron 55.0%
TCTGATGCGTGTCCGACACT+GGG + chr7_4:4486867-4486886 Msa1136230:intron 55.0%
CGGTGACAAACTCAGGTCAC+CGG - chr7_4:4489022-4489041 None:intergenic 55.0%
CGGTGACCTGAGTTTGTCAC+CGG + chr7_4:4489020-4489039 Msa1136230:CDS 55.0%
CTGAGTTTGTCACCGGAGAG+CGG + chr7_4:4489027-4489046 Msa1136230:CDS 55.0%
TTACACTCTCCACCGCTCTC+CGG - chr7_4:4489042-4489061 None:intergenic 55.0%
!! TGTGATGGAAGTGGTAGCGG+CGG + chr7_4:4489066-4489085 Msa1136230:CDS 55.0%
GAAAGGGCCATGGACACCTG+AGG + chr7_4:4486550-4486569 Msa1136230:CDS 60.0%
GACACTGACACGCCACGACA+CGG + chr7_4:4486777-4486796 Msa1136230:intron 60.0%
CTCTGATGCGTGTCCGACAC+TGG + chr7_4:4486866-4486885 Msa1136230:intron 60.0%
CGCTCTCCGGTGACAAACTC+AGG - chr7_4:4489029-4489048 None:intergenic 60.0%
AGTTTGTCACCGGAGAGCGG+TGG + chr7_4:4489030-4489049 Msa1136230:CDS 60.0%
!! GATGGAAGTGGTAGCGGCGG+TGG + chr7_4:4489069-4489088 Msa1136230:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 4486197 4489671 4486197 ID=Msa1136230;Name=Msa1136230
chr7_4 mRNA 4486197 4489671 4486197 ID=Msa1136230-mRNA-1;Parent=Msa1136230;Name=Msa1136230-mRNA-1;_AED=0.04;_eAED=0.04;_QI=315|1|1|1|1|1|3|492|313
chr7_4 exon 4486197 4486644 4486197 ID=Msa1136230-mRNA-1:exon:1173;Parent=Msa1136230-mRNA-1
chr7_4 exon 4486995 4487124 4486995 ID=Msa1136230-mRNA-1:exon:1174;Parent=Msa1136230-mRNA-1
chr7_4 exon 4488501 4489671 4488501 ID=Msa1136230-mRNA-1:exon:1175;Parent=Msa1136230-mRNA-1
chr7_4 five_prime_UTR 4486197 4486511 4486197 ID=Msa1136230-mRNA-1:five_prime_utr;Parent=Msa1136230-mRNA-1
chr7_4 CDS 4486512 4486644 4486512 ID=Msa1136230-mRNA-1:cds;Parent=Msa1136230-mRNA-1
chr7_4 CDS 4486995 4487124 4486995 ID=Msa1136230-mRNA-1:cds;Parent=Msa1136230-mRNA-1
chr7_4 CDS 4488501 4489179 4488501 ID=Msa1136230-mRNA-1:cds;Parent=Msa1136230-mRNA-1
chr7_4 three_prime_UTR 4489180 4489671 4489180 ID=Msa1136230-mRNA-1:three_prime_utr;Parent=Msa1136230-mRNA-1
Gene Sequence

>Msa1136230

ATGGGGAGATCACCATGTTGTGAAAAGGTTGGTTTAAAGAAAGGGCCATGGACACCTGAGGAAGATCAAAAGCTCTTATCTTACATTGAAGAACATGGCCATGGAAGCTGGCGTTCTTTGCCTACAAAAGCTGGACTTGAGAGGTGTGGCAAGAGCTGCAGACTAAGATGGACTAATTATCTAAGGCCTGATATTAAGAGGGGAAAGTTTAGTGTGCAAGAAGAACAAACCATTATTCAACTTCATGCATTTTTAGGCAACAGGTGGTCATCAATAGCCACTCGTTTGCCTAAGAGAACAGACAATGAAATCAAGAACTATTGGAACACACATCTTAAAAAAAGATTAACCAAAATGGGAATTGATCCTGTTACACACAAGCCAAAAAATGAAACCCTTTTTCCTGAAAACCATTCCAAGAATGCTGCAAATCTTAGCCACAAGGCTCAATGGGAAAGTGCAAGACTTGAAGCTGAAGCAAGATTGGTTAGAGAATCAAAGTTACGTTCACAATTGCAACAGCATCAACTTGGAAGTAATATTTCTCTTTTTCCATCACAACCTTCATCATCTACATCATCATCTTCAAATCAAGTACTTAGTATTAAAGAAGAAGGTGAGAAAGAGTGGAAAGGTTATGAAGATTCAACACATTTGTTAGAATTCAAAGATTTGATGGAGAATCCATCAATGGCTTTTAGTTCTACATTGCAACATGAGATGACAACGATCAGTGTTGCTGAGGAGGGTTTCACTAATCTCTTGCTTGATAATTCTAACTCCGGTGACCTGAGTTTGTCACCGGAGAGCGGTGGAGAGTGTAATACTTGTGATGGAAGTGGTAGCGGCGGTGGAAGTGATTTCAATGAAGATAACAAGAACTACTGGAACAACATTCTCAATTTAGTTAATTCTTCGTCTTCTGATTCGCCAATGTTCTAA

Protein sequence

>Msa1136230

MGRSPCCEKVGLKKGPWTPEEDQKLLSYIEEHGHGSWRSLPTKAGLERCGKSCRLRWTNYLRPDIKRGKFSVQEEQTIIQLHAFLGNRWSSIATRLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNETLFPENHSKNAANLSHKAQWESARLEAEARLVRESKLRSQLQQHQLGSNISLFPSQPSSSTSSSSNQVLSIKEEGEKEWKGYEDSTHLLEFKDLMENPSMAFSSTLQHEMTTISVAEEGFTNLLLDNSNSGDLSLSPESGGECNTCDGSGSGGGSDFNEDNKNYWNNILNLVNSSSSDSPMF*