Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696830 | RHN62626.1 | 82.927 | 164 | 23 | 3 | 1 | 160 | 333 | 495 | 7.57e-63 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696830 | sp|Q7Y214|GTE7_ARATH | 46.087 | 115 | 52 | 2 | 3 | 115 | 426 | 532 | 2.66e-20 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696830 | A0A396IAI9 | 82.927 | 164 | 23 | 3 | 1 | 160 | 333 | 495 | 3.61e-63 | 211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002460 | Msa0696830 | 0.800969 | 1.122877e-48 | -8.615850e-47 |
| Msa0006110 | Msa0696830 | 0.811081 | 8.367754e-51 | -8.615850e-47 |
| Msa0036140 | Msa0696830 | 0.824617 | 7.324983e-54 | -8.615850e-47 |
| Msa0045790 | Msa0696830 | 0.819033 | 1.435938e-52 | -8.615850e-47 |
| Msa0046160 | Msa0696830 | 0.821691 | 3.529361e-53 | -8.615850e-47 |
| Msa0622650 | Msa0696830 | 0.822877 | 1.872362e-53 | -8.615850e-47 |
| Msa0657970 | Msa0696830 | 0.819949 | 8.879427e-53 | -8.615850e-47 |
| Msa0667050 | Msa0696830 | 0.821336 | 4.262416e-53 | -8.615850e-47 |
| Msa0682330 | Msa0696830 | 0.813602 | 2.355960e-51 | -8.615850e-47 |
| Msa0688070 | Msa0696830 | 0.803377 | 3.588805e-49 | -8.615850e-47 |
| Msa0693380 | Msa0696830 | 0.804950 | 1.688673e-49 | -8.615850e-47 |
| Msa0696830 | Msa0820770 | 0.800382 | 1.479267e-48 | -8.615850e-47 |
| Msa0696830 | Msa0825340 | 0.801410 | 9.122064e-49 | -8.615850e-47 |
| Msa0696830 | Msa0861090 | 0.801470 | 8.870001e-49 | -8.615850e-47 |
| Msa0696830 | Msa0880950 | 0.816311 | 5.903454e-52 | -8.615850e-47 |
| Msa0696830 | Msa0896750 | 0.802940 | 4.419452e-49 | -8.615850e-47 |
| Msa0696830 | Msa0909120 | 0.806999 | 6.260746e-50 | -8.615850e-47 |
| Msa0696830 | Msa0909140 | 0.809606 | 1.741380e-50 | -8.615850e-47 |
| Msa0696830 | Msa0969450 | 0.800073 | 1.710298e-48 | -8.615850e-47 |
| Msa0696830 | Msa1004840 | 0.801466 | 8.885881e-49 | -8.615850e-47 |
| Msa0696830 | Msa1019000 | 0.803537 | 3.325478e-49 | -8.615850e-47 |
| Msa0696830 | Msa1019150 | 0.804266 | 2.345438e-49 | -8.615850e-47 |
| Msa0696830 | Msa1041670 | 0.808711 | 2.707855e-50 | -8.615850e-47 |
| Msa0696830 | Msa1081330 | 0.810905 | 9.136218e-51 | -8.615850e-47 |
| Msa0696830 | Msa1082500 | 0.813106 | 3.027760e-51 | -8.615850e-47 |
| Msa0696830 | Msa1085200 | 0.801055 | 1.078298e-48 | -8.615850e-47 |
| Msa0696830 | Msa1098400 | 0.802118 | 6.529431e-49 | -8.615850e-47 |
| Msa0696830 | Msa1147740 | 0.823300 | 1.491598e-53 | -8.615850e-47 |
| Msa0696830 | Msa1151910 | 0.807797 | 4.240032e-50 | -8.615850e-47 |
| Msa0696830 | Msa1166560 | 0.800280 | 1.552181e-48 | -8.615850e-47 |
| Msa0696830 | Msa1199570 | 0.827038 | 1.951017e-54 | -8.615850e-47 |
| Msa0696830 | Msa1207220 | 0.803719 | 3.047713e-49 | -8.615850e-47 |
| Msa0696830 | Msa1250290 | 0.800330 | 1.515736e-48 | -8.615850e-47 |
| Msa0696830 | Msa1297290 | 0.815245 | 1.020283e-51 | -8.615850e-47 |
| Msa0696830 | Msa1313150 | 0.831219 | 1.890014e-55 | -8.615850e-47 |
| Msa0696830 | Msa1328710 | 0.823092 | 1.667888e-53 | -8.615850e-47 |
| Msa0696830 | Msa1385000 | 0.815608 | 8.473986e-52 | -8.615850e-47 |
| Msa0696830 | Msa1392260 | 0.804245 | 2.369501e-49 | -8.615850e-47 |
| Msa0696830 | Msa1409700 | 0.820642 | 6.159393e-53 | -8.615850e-47 |
| Msa0696830 | Msa1423880 | 0.828629 | 8.082593e-55 | -8.615850e-47 |
| Msa0696830 | Msa1429900 | 0.801106 | 1.052869e-48 | -8.615850e-47 |
| Msa0696830 | Msa1435270 | 0.808475 | 3.040638e-50 | -8.615850e-47 |
| Msa0696830 | Msa1436480 | 0.819059 | 1.417002e-52 | -8.615850e-47 |
| Msa0696830 | Msa1460020 | 0.801400 | 9.166454e-49 | -8.615850e-47 |
| Msa0123300 | Msa0696830 | 0.808957 | 2.399090e-50 | -8.615850e-47 |
| Msa0143560 | Msa0696830 | 0.818345 | 2.057382e-52 | -8.615850e-47 |
| Msa0166870 | Msa0696830 | 0.801513 | 8.691425e-49 | -8.615850e-47 |
| Msa0200260 | Msa0696830 | 0.801367 | 9.312467e-49 | -8.615850e-47 |
| Msa0237310 | Msa0696830 | 0.803657 | 3.139648e-49 | -8.615850e-47 |
| Msa0376350 | Msa0696830 | 0.803145 | 4.008327e-49 | -8.615850e-47 |
| Msa0388960 | Msa0696830 | 0.825595 | 4.301805e-54 | -8.615850e-47 |
| Msa0403260 | Msa0696830 | 0.801044 | 1.083974e-48 | -8.615850e-47 |
| Msa0410650 | Msa0696830 | 0.805960 | 1.037226e-49 | -8.615850e-47 |
| Msa0424790 | Msa0696830 | 0.807142 | 5.839426e-50 | -8.615850e-47 |
| Msa0259500 | Msa0696830 | 0.816450 | 5.496856e-52 | -8.615850e-47 |
| Msa0274730 | Msa0696830 | 0.805130 | 1.548850e-49 | -8.615850e-47 |
| Msa0305700 | Msa0696830 | 0.808177 | 3.519871e-50 | -8.615850e-47 |
| Msa0315530 | Msa0696830 | 0.801773 | 7.687806e-49 | -8.615850e-47 |
| Msa0341540 | Msa0696830 | 0.816722 | 4.776649e-52 | -8.615850e-47 |
| Msa0357020 | Msa0696830 | 0.822553 | 2.227876e-53 | -8.615850e-47 |
| Msa0484780 | Msa0696830 | 0.812491 | 4.128947e-51 | -8.615850e-47 |
| Msa0488560 | Msa0696830 | 0.803608 | 3.213695e-49 | -8.615850e-47 |
| Msa0503060 | Msa0696830 | 0.805732 | 1.158274e-49 | -8.615850e-47 |
| Msa0507680 | Msa0696830 | 0.802925 | 4.452007e-49 | -8.615850e-47 |
| Msa0545210 | Msa0696830 | 0.804519 | 2.077867e-49 | -8.615850e-47 |
| Msa0546680 | Msa0696830 | 0.808021 | 3.799425e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696830 | MtrunA17_Chr4g0049471 | 82.927 | 164 | 23 | 3 | 1 | 160 | 333 | 495 | 6.96e-67 | 211 |
| Msa0696830 | MtrunA17_Chr4g0049491 | 85.276 | 163 | 20 | 2 | 1 | 160 | 371 | 532 | 6.82e-65 | 207 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0696830 | AT5G65630.1 | 46.087 | 115 | 52 | 2 | 3 | 115 | 426 | 532 | 2.70e-21 | 89.7 |
| Msa0696830 | AT5G10550.1 | 41.739 | 115 | 56 | 3 | 3 | 114 | 421 | 527 | 1.53e-16 | 76.3 |
Find 55 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATGCAGATTCGGATTC+AGG | 0.197155 | 4_4:+66830762 | Msa0696830:intron |
| TCCAGTGGTTCCAGCAGCTC+TGG | 0.278947 | 4_4:+66830647 | Msa0696830:CDS |
| GCATCAACCTTCTCCCTATC+AGG | 0.335506 | 4_4:-66830470 | None:intergenic |
| TCGGATTCAGGGAGTTCTTC+AGG | 0.341320 | 4_4:+66830774 | Msa0696830:CDS |
| ACCCCATTGCCTTTGTTTGA+AGG | 0.345351 | 4_4:-66830336 | None:intergenic |
| GATTAAGCGGCAGGCGCTAA+TGG | 0.380098 | 4_4:+66830299 | Msa0696830:CDS |
| TTCTGTTTGTTTCCCTCAGA+AGG | 0.387137 | 4_4:-66830500 | None:intergenic |
| AAGGAAGAGAAATGGGCATT+TGG | 0.415759 | 4_4:+66830174 | Msa0696830:CDS |
| TGCCTTCAAACAAAGGCAAT+GGG | 0.422340 | 4_4:+66830334 | Msa0696830:CDS |
| CTGTTGACACGGAGACTCTC+TGG | 0.433032 | 4_4:+66830233 | Msa0696830:CDS |
| GGATGAGATTGAGCTTGATA+TGG | 0.436408 | 4_4:+66830207 | Msa0696830:CDS |
| CATATCACAAGGAAGAGAAA+TGG | 0.438477 | 4_4:+66830166 | Msa0696830:CDS |
| ATTTACAGGAATTGCCTGAT+AGG | 0.443388 | 4_4:+66830456 | Msa0696830:intron |
| CCCAGAGCTGCTGGAACCAC+TGG | 0.444706 | 4_4:-66830648 | None:intergenic |
| TCGATCGATTGGTTACCAAT+TGG | 0.445939 | 4_4:+66830259 | Msa0696830:CDS |
| ACAGGTGGGAAATCGTTTGC+TGG | 0.455112 | 4_4:-66830569 | None:intergenic |
| GATAAAGATATGAGTGGTAC+TGG | 0.457040 | 4_4:+66830605 | Msa0696830:CDS |
| ATGGGCATTTGGAGCAAGAT+GGG | 0.463782 | 4_4:+66830185 | Msa0696830:CDS |
| TCAGGAAGTGATTCTGAAGC+TGG | 0.466135 | 4_4:+66830792 | Msa0696830:CDS |
| TTCATGCAGATTCGGATTCA+GGG | 0.475639 | 4_4:+66830763 | Msa0696830:intron |
| GGAATCACTCCCAGAGCTGC+TGG | 0.477857 | 4_4:-66830657 | None:intergenic |
| ATATCACAAGGAAGAGAAAT+GGG | 0.480591 | 4_4:+66830167 | Msa0696830:CDS |
| GTTTGTTTCCCTCAGAAGGA+GGG | 0.485872 | 4_4:-66830496 | None:intergenic |
| CTCTCTGGAACTCGATCGAT+TGG | 0.498426 | 4_4:+66830248 | Msa0696830:CDS |
| CCAGTGGTTCCAGCAGCTCT+GGG | 0.500740 | 4_4:+66830648 | Msa0696830:CDS |
| TGTTTGTTTCCCTCAGAAGG+AGG | 0.503202 | 4_4:-66830497 | None:intergenic |
| TTGATGAGGATGTTGACATC+GGG | 0.505049 | 4_4:+66830537 | Msa0696830:CDS |
| TTTGTTTCCCTCAGAAGGAG+GGG | 0.511688 | 4_4:-66830495 | None:intergenic |
| TTATCTTGCTCAATCTCCAC+AGG | 0.515091 | 4_4:-66830587 | None:intergenic |
| GGTGAGCAAGATTAAGCGGC+AGG | 0.516928 | 4_4:+66830290 | Msa0696830:intron |
| TTTACAGGAATTGCCTGATA+GGG | 0.522059 | 4_4:+66830457 | Msa0696830:intron |
| AATGGGCATTTGGAGCAAGA+TGG | 0.522107 | 4_4:+66830184 | Msa0696830:CDS |
| GTGCCTTCAAACAAAGGCAA+TGG | 0.528594 | 4_4:+66830333 | Msa0696830:CDS |
| TGATGCAACCCCTCCTTCTG+AGG | 0.557199 | 4_4:+66830487 | Msa0696830:CDS |
| AATAATGTGCCTTCAAACAA+AGG | 0.557916 | 4_4:+66830327 | Msa0696830:CDS |
| TCTTGCTCAATCTCCACAGG+TGG | 0.571533 | 4_4:-66830584 | None:intergenic |
| AGCAAACGATTTCCCACCTG+TGG | 0.582684 | 4_4:+66830571 | Msa0696830:CDS |
| AGTGATTCTGAAGCTGGCAA+TGG | 0.592321 | 4_4:+66830798 | Msa0696830:CDS |
| GAAGATAGATGATGTTGATG+AGG | 0.592779 | 4_4:+66830523 | Msa0696830:CDS |
| GATGCAACCCCTCCTTCTGA+GGG | 0.606162 | 4_4:+66830488 | Msa0696830:CDS |
| TGATATGGAGGCTGTTGACA+CGG | 0.617215 | 4_4:+66830222 | Msa0696830:CDS |
| GGAATTGCCTGATAGGGAGA+AGG | 0.617711 | 4_4:+66830463 | Msa0696830:intron |
| TGTGTCAGTAGTAGTTCCAG+TGG | 0.625768 | 4_4:+66830632 | Msa0696830:CDS |
| GGGAGTGATTCCTCGTCGAG+TGG | 0.628680 | 4_4:+66830668 | Msa0696830:CDS |
| AGATGGTGAGCAAGATTAAG+CGG | 0.630774 | 4_4:+66830286 | Msa0696830:intron |
| CTTGCTCAATCTCCACAGGT+GGG | 0.652511 | 4_4:-66830583 | None:intergenic |
| TGGGCATTTGGAGCAAGATG+GGG | 0.655326 | 4_4:+66830186 | Msa0696830:CDS |
| GAGCAAGATAAAGATATGAG+TGG | 0.661911 | 4_4:+66830599 | Msa0696830:CDS |
| TGAGATTGAGCTTGATATGG+AGG | 0.664012 | 4_4:+66830210 | Msa0696830:CDS |
| GTTGATGAGGATGTTGACAT+CGG | 0.672168 | 4_4:+66830536 | Msa0696830:CDS |
| AACAAGTAGTACATATCACA+AGG | 0.684980 | 4_4:+66830155 | Msa0696830:CDS |
| GCCTTCAAACAAAGGCAATG+GGG | 0.698333 | 4_4:+66830335 | Msa0696830:CDS |
| AAAGATATGAGTGGTACTGG+TGG | 0.720299 | 4_4:+66830608 | Msa0696830:CDS |
| AGAGGTTATACCACTCGACG+AGG | 0.738536 | 4_4:-66830678 | None:intergenic |
| TGATGAGGATGTTGACATCG+GGG | 0.788370 | 4_4:+66830538 | Msa0696830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACAATTAAAATTCATAT+AGG | + | chr4_4:66832176-66832195 | Msa0696830:intron | 10.0% |
| !! | AATAATAGTATCTTCTTTAA+AGG | + | chr4_4:66831469-66831488 | Msa0696830:intron | 15.0% |
| !! | ATGATTCAAAAAGAAAATAT+GGG | - | chr4_4:66831886-66831905 | None:intergenic | 15.0% |
| !! | TGAATCATCATAATATATAA+AGG | + | chr4_4:66831898-66831917 | Msa0696830:intron | 15.0% |
| !!! | ATTTTGATGAGTTTTTAAAA+TGG | - | chr4_4:66832809-66832828 | None:intergenic | 15.0% |
| !! | AGAATAAAAAATGGACAATA+AGG | - | chr4_4:66830367-66830386 | None:intergenic | 20.0% |
| !! | TCATTCAACAGAATAAAAAA+TGG | - | chr4_4:66830376-66830395 | None:intergenic | 20.0% |
| !!! | TGAACTAGATTTTATTTAAC+AGG | + | chr4_4:66831703-66831722 | Msa0696830:intron | 20.0% |
| !! | GATGATTCAAAAAGAAAATA+TGG | - | chr4_4:66831887-66831906 | None:intergenic | 20.0% |
| !! | AAGTCAATATTGAGTTTAAA+AGG | + | chr4_4:66832313-66832332 | Msa0696830:intron | 20.0% |
| !! | TAACATCATATTACAGTAAT+AGG | + | chr4_4:66832693-66832712 | Msa0696830:intron | 20.0% |
| !! | AACATCATATTACAGTAATA+GGG | + | chr4_4:66832694-66832713 | Msa0696830:intron | 20.0% |
| !!! | TTAATGCATTTTAAGAGAAA+CGG | + | chr4_4:66832883-66832902 | Msa0696830:intron | 20.0% |
| !! | ATTAGCAAAGAATTTATTTG+AGG | - | chr4_4:66833367-66833386 | None:intergenic | 20.0% |
| ! | ACAATCATGATAAATTTAGC+CGG | - | chr4_4:66831011-66831030 | None:intergenic | 25.0% |
| !!! | TCTTTAAACTTGTTGTAACA+GGG | + | chr4_4:66831030-66831049 | Msa0696830:intron | 25.0% |
| ! | ATAGATGCTTAAGAAAGTTT+AGG | + | chr4_4:66831232-66831251 | Msa0696830:intron | 25.0% |
| ! | AATTCTTTCTCCAAAATTTG+AGG | - | chr4_4:66831333-66831352 | None:intergenic | 25.0% |
| !!! | TTTTGGAGAAAGAATTTTTG+TGG | + | chr4_4:66831337-66831356 | Msa0696830:intron | 25.0% |
| ! | TTATGAATGAGTGGTATATT+AGG | + | chr4_4:66831676-66831695 | Msa0696830:intron | 25.0% |
| !!! | CTTAGCTTTATATTTCATTG+AGG | + | chr4_4:66831751-66831770 | Msa0696830:intron | 25.0% |
| ! | ACTTATACTGAAAACTAACA+AGG | + | chr4_4:66831814-66831833 | Msa0696830:intron | 25.0% |
| ! | ATCATAATATATAAAGGCCT+AGG | + | chr4_4:66831904-66831923 | Msa0696830:intron | 25.0% |
| ! | AGAAAAAAACAGTACAGTAA+TGG | + | chr4_4:66831983-66832002 | Msa0696830:intron | 25.0% |
| ! | GAAAAAAACAGTACAGTAAT+GGG | + | chr4_4:66831984-66832003 | Msa0696830:intron | 25.0% |
| ! | CGACTTATTAAAATTTCAAG+GGG | - | chr4_4:66832123-66832142 | None:intergenic | 25.0% |
| ! | CCGACTTATTAAAATTTCAA+GGG | - | chr4_4:66832124-66832143 | None:intergenic | 25.0% |
| !!! | CCCTTGAAATTTTAATAAGT+CGG | + | chr4_4:66832121-66832140 | Msa0696830:intron | 25.0% |
| ! | TCCGACTTATTAAAATTTCA+AGG | - | chr4_4:66832125-66832144 | None:intergenic | 25.0% |
| ! | TTGAGTTTAAAAGGAGAATT+AGG | + | chr4_4:66832322-66832341 | Msa0696830:intron | 25.0% |
| ! | TTGCATTAATATCCAAGTAT+TGG | + | chr4_4:66832730-66832749 | Msa0696830:intron | 25.0% |
| !! | TTTACTTGTTAAATGTGTGA+AGG | - | chr4_4:66832844-66832863 | None:intergenic | 25.0% |
| !!! | TATGAGTATTGATCATTTGA+CGG | - | chr4_4:66832941-66832960 | None:intergenic | 25.0% |
| ! | CAATTGTTGTAAGATATGAA+TGG | + | chr4_4:66832996-66833015 | Msa0696830:intron | 25.0% |
| !! | AAATGACTAGTTGAATAAGT+CGG | + | chr4_4:66833063-66833082 | Msa0696830:intron | 25.0% |
| !!! | TAATGGATTAATCAATCTGT+TGG | - | chr4_4:66833312-66833331 | None:intergenic | 25.0% |
| ! | TCCATTAATCTAAAAGATCA+AGG | + | chr4_4:66833325-66833344 | Msa0696830:intron | 25.0% |
| ! | CCATTAATCTAAAAGATCAA+GGG | + | chr4_4:66833326-66833345 | Msa0696830:intron | 25.0% |
| ! | GAAAGTGATATTCAAATTTC+AGG | + | chr4_4:66833434-66833453 | Msa0696830:intron | 25.0% |
| AACAAGTAGTACATATCACA+AGG | + | chr4_4:66830155-66830174 | Msa0696830:CDS | 30.0% | |
| ATATCACAAGGAAGAGAAAT+GGG | + | chr4_4:66830167-66830186 | Msa0696830:CDS | 30.0% | |
| AATAATGTGCCTTCAAACAA+AGG | + | chr4_4:66830327-66830346 | Msa0696830:CDS | 30.0% | |
| !! | AATTTGTTGTGTGCATTTAC+AGG | + | chr4_4:66830442-66830461 | Msa0696830:intron | 30.0% |
| !! | TTTGTACTCTGAAATCATCA+TGG | + | chr4_4:66830719-66830738 | Msa0696830:intron | 30.0% |
| !! | TTGTACTCTGAAATCATCAT+GGG | + | chr4_4:66830720-66830739 | Msa0696830:intron | 30.0% |
| ! | TTTTGATCTTCATGCAGATT+CGG | + | chr4_4:66830755-66830774 | Msa0696830:intron | 30.0% |
| !!! | GTACATTTTTTACTCTGCTA+TGG | + | chr4_4:66830960-66830979 | Msa0696830:intron | 30.0% |
| !! | GTCTTTAAACTTGTTGTAAC+AGG | + | chr4_4:66831029-66831048 | Msa0696830:intron | 30.0% |
| !! | CTTTAAACTTGTTGTAACAG+GGG | + | chr4_4:66831031-66831050 | Msa0696830:intron | 30.0% |
| !! | TGTGACTTTGGAGTATATAA+AGG | + | chr4_4:66831134-66831153 | Msa0696830:intron | 30.0% |
| !! | GTGACTTTGGAGTATATAAA+GGG | + | chr4_4:66831135-66831154 | Msa0696830:intron | 30.0% |
| ! | TTTGGAGTATATAAAGGGTT+TGG | + | chr4_4:66831140-66831159 | Msa0696830:intron | 30.0% |
| ACTTACTGTAAATGTGTACA+GGG | - | chr4_4:66831296-66831315 | None:intergenic | 30.0% | |
| TACTTACTGTAAATGTGTAC+AGG | - | chr4_4:66831297-66831316 | None:intergenic | 30.0% | |
| ! | AAATCACTCTCCTCAAATTT+TGG | + | chr4_4:66831320-66831339 | Msa0696830:intron | 30.0% |
| AGGATGACCTTATTCAAATA+AGG | + | chr4_4:66831429-66831448 | Msa0696830:intron | 30.0% | |
| GGATGACCTTATTCAAATAA+GGG | + | chr4_4:66831430-66831449 | Msa0696830:intron | 30.0% | |
| ATCTTGTCAAACGATTCTTT+CGG | - | chr4_4:66831544-66831563 | None:intergenic | 30.0% | |
| CGTTTGACAAGATAAAATAG+TGG | + | chr4_4:66831551-66831570 | Msa0696830:intron | 30.0% | |
| CATTTCACGAACGTATATAA+GGG | - | chr4_4:66831596-66831615 | None:intergenic | 30.0% | |
| TCATTTCACGAACGTATATA+AGG | - | chr4_4:66831597-66831616 | None:intergenic | 30.0% | |
| TTGCAAAGATTATGAATGAG+TGG | + | chr4_4:66831667-66831686 | Msa0696830:intron | 30.0% | |
| ! | AGTCTGTCTTTAAGTTTATC+CGG | - | chr4_4:66831797-66831816 | None:intergenic | 30.0% |
| ! | ATGAAGCACTAAAATTACAC+AGG | - | chr4_4:66831859-66831878 | None:intergenic | 30.0% |
| ! | TATAGCTTAGTTGTTATTGC+TGG | - | chr4_4:66832024-66832043 | None:intergenic | 30.0% |
| TATTAAAATTTCAAGGGGAC+TGG | - | chr4_4:66832118-66832137 | None:intergenic | 30.0% | |
| TAAAAGGAGAATTAGGACTT+AGG | + | chr4_4:66832329-66832348 | Msa0696830:intron | 30.0% | |
| ! | TTGTATTTCTGACCAATACT+TGG | - | chr4_4:66832745-66832764 | None:intergenic | 30.0% |
| !!! | TTTTTAAAATGGCCTAACGT+GGG | - | chr4_4:66832798-66832817 | None:intergenic | 30.0% |
| GATCAATACTCATATCACTT+TGG | + | chr4_4:66832947-66832966 | Msa0696830:intron | 30.0% | |
| !! | TGTTGACTTCAAATAACATG+GGG | - | chr4_4:66832974-66832993 | None:intergenic | 30.0% |
| !! | GTGTTGACTTCAAATAACAT+GGG | - | chr4_4:66832975-66832994 | None:intergenic | 30.0% |
| !! | TGTGTTGACTTCAAATAACA+TGG | - | chr4_4:66832976-66832995 | None:intergenic | 30.0% |
| ! | CCCTTGATCTTTTAGATTAA+TGG | - | chr4_4:66833329-66833348 | None:intergenic | 30.0% |
| AAGGAGACAATTATGATTAG+TGG | + | chr4_4:66833400-66833419 | Msa0696830:intron | 30.0% | |
| CATATCACAAGGAAGAGAAA+TGG | + | chr4_4:66830166-66830185 | Msa0696830:CDS | 35.0% | |
| GGTTACCAATTGGAAAAAGA+TGG | + | chr4_4:66830269-66830288 | Msa0696830:CDS | 35.0% | |
| ATTTACAGGAATTGCCTGAT+AGG | + | chr4_4:66830456-66830475 | Msa0696830:intron | 35.0% | |
| TTTACAGGAATTGCCTGATA+GGG | + | chr4_4:66830457-66830476 | Msa0696830:intron | 35.0% | |
| GAAGATAGATGATGTTGATG+AGG | + | chr4_4:66830523-66830542 | Msa0696830:CDS | 35.0% | |
| GAGCAAGATAAAGATATGAG+TGG | + | chr4_4:66830599-66830618 | Msa0696830:CDS | 35.0% | |
| GATAAAGATATGAGTGGTAC+TGG | + | chr4_4:66830605-66830624 | Msa0696830:CDS | 35.0% | |
| GTACAAACCACAACATTTAG+AGG | - | chr4_4:66830706-66830725 | None:intergenic | 35.0% | |
| CTGCATGAAGATCAAAATTG+AGG | - | chr4_4:66830752-66830771 | None:intergenic | 35.0% | |
| CAATGATCAAAAGCAGTAGT+AGG | + | chr4_4:66831164-66831183 | Msa0696830:intron | 35.0% | |
| AGAAAGTAGCAAGTAATCTG+TGG | + | chr4_4:66831190-66831209 | Msa0696830:intron | 35.0% | |
| GTGGTAAAAGTTTCTCTAGT+AGG | + | chr4_4:66831209-66831228 | Msa0696830:intron | 35.0% | |
| TGATACATACAACATGGAGA+AGG | - | chr4_4:66831406-66831425 | None:intergenic | 35.0% | |
| TTCTCCATGTTGTATGTATC+AGG | + | chr4_4:66831405-66831424 | Msa0696830:intron | 35.0% | |
| TCTCCATGTTGTATGTATCA+GGG | + | chr4_4:66831406-66831425 | Msa0696830:intron | 35.0% | |
| ! | CCACTTCCCTTATTTGAATA+AGG | - | chr4_4:66831439-66831458 | None:intergenic | 35.0% |
| CCTTATTCAAATAAGGGAAG+TGG | + | chr4_4:66831436-66831455 | Msa0696830:intron | 35.0% | |
| ! | CGTATATAAGGGCTTTTGAT+GGG | - | chr4_4:66831585-66831604 | None:intergenic | 35.0% |
| ! | ACGTATATAAGGGCTTTTGA+TGG | - | chr4_4:66831586-66831605 | None:intergenic | 35.0% |
| CATCTAAAAATGAACGAGTG+AGG | + | chr4_4:66831636-66831655 | Msa0696830:intron | 35.0% | |
| GTTATTGTTCGTTCCTGATT+AGG | + | chr4_4:66832198-66832217 | Msa0696830:intron | 35.0% | |
| TTTGCAAATCTCTCTCTCAA+CGG | - | chr4_4:66832475-66832494 | None:intergenic | 35.0% | |
| !!! | TGCTGAATTTGGGTCTTTTT+TGG | + | chr4_4:66832595-66832614 | Msa0696830:intron | 35.0% |
| !!! | GTTTTTAAAATGGCCTAACG+TGG | - | chr4_4:66832799-66832818 | None:intergenic | 35.0% |
| CTTGTTAAATGTGTGAAGGT+TGG | - | chr4_4:66832840-66832859 | None:intergenic | 35.0% | |
| AAGGAAGAGAAATGGGCATT+TGG | + | chr4_4:66830174-66830193 | Msa0696830:CDS | 40.0% | |
| GGATGAGATTGAGCTTGATA+TGG | + | chr4_4:66830207-66830226 | Msa0696830:CDS | 40.0% | |
| TGAGATTGAGCTTGATATGG+AGG | + | chr4_4:66830210-66830229 | Msa0696830:CDS | 40.0% | |
| ! | TCGATCGATTGGTTACCAAT+TGG | + | chr4_4:66830259-66830278 | Msa0696830:CDS | 40.0% |
| ! | GCTCACCATCTTTTTCCAAT+TGG | - | chr4_4:66830277-66830296 | None:intergenic | 40.0% |
| AGATGGTGAGCAAGATTAAG+CGG | + | chr4_4:66830286-66830305 | Msa0696830:intron | 40.0% | |
| TGCCTTCAAACAAAGGCAAT+GGG | + | chr4_4:66830334-66830353 | Msa0696830:CDS | 40.0% | |
| GCTGTCTAATGTAGCATTGT+TGG | + | chr4_4:66830400-66830419 | Msa0696830:intron | 40.0% | |
| TTCTGTTTGTTTCCCTCAGA+AGG | - | chr4_4:66830503-66830522 | None:intergenic | 40.0% | |
| ! | GTTGATGAGGATGTTGACAT+CGG | + | chr4_4:66830536-66830555 | Msa0696830:CDS | 40.0% |
| TTGATGAGGATGTTGACATC+GGG | + | chr4_4:66830537-66830556 | Msa0696830:CDS | 40.0% | |
| TTATCTTGCTCAATCTCCAC+AGG | - | chr4_4:66830590-66830609 | None:intergenic | 40.0% | |
| ! | AAAGATATGAGTGGTACTGG+TGG | + | chr4_4:66830608-66830627 | Msa0696830:CDS | 40.0% |
| CCACAACATTTAGAGGAAAG+AGG | - | chr4_4:66830699-66830718 | None:intergenic | 40.0% | |
| CCTCTTTCCTCTAAATGTTG+TGG | + | chr4_4:66830696-66830715 | Msa0696830:intron | 40.0% | |
| TTCATGCAGATTCGGATTCA+GGG | + | chr4_4:66830763-66830782 | Msa0696830:intron | 40.0% | |
| ! | TGTTTTGCAGATAGCATAGC+CGG | + | chr4_4:66830989-66831008 | Msa0696830:intron | 40.0% |
| CAAAGTCACAACGCAAATCA+TGG | - | chr4_4:66831124-66831143 | None:intergenic | 40.0% | |
| ! | CATGATTTGCGTTGTGACTT+TGG | + | chr4_4:66831122-66831141 | Msa0696830:intron | 40.0% |
| TACATACAACATGGAGAAGG+TGG | - | chr4_4:66831403-66831422 | None:intergenic | 40.0% | |
| ACACTGAAGAAAATCTGTGC+CGG | + | chr4_4:66831775-66831794 | Msa0696830:intron | 40.0% | |
| CTATTTGCACATCTTGTCCT+AGG | - | chr4_4:66831924-66831943 | None:intergenic | 40.0% | |
| CTAGGACAAGATGTGCAAAT+AGG | + | chr4_4:66831922-66831941 | Msa0696830:intron | 40.0% | |
| !! | TGTTATTGCTGTTCGGTGTT+GGG | - | chr4_4:66832058-66832077 | None:intergenic | 40.0% |
| ! | AGTCTGCTGTTATTGCTGTT+CGG | - | chr4_4:66832065-66832084 | None:intergenic | 40.0% |
| !!! | TTTCAAGGGGACTGGTTTTT+TGG | - | chr4_4:66832110-66832129 | None:intergenic | 40.0% |
| ATTGTTCGTTCCTGATTAGG+AGG | + | chr4_4:66832201-66832220 | Msa0696830:intron | 40.0% | |
| TCAACATTCACCTCCTAATC+AGG | - | chr4_4:66832214-66832233 | None:intergenic | 40.0% | |
| TTAGGAGGTGAATGTTGATG+CGG | + | chr4_4:66832216-66832235 | Msa0696830:intron | 40.0% | |
| TAGGACTTAGGAGAGTAGAA+AGG | + | chr4_4:66832341-66832360 | Msa0696830:intron | 40.0% | |
| GAGTAGAAAGGATCTAACCT+TGG | + | chr4_4:66832353-66832372 | Msa0696830:intron | 40.0% | |
| TGCACCTCCACACTATATAA+GGG | - | chr4_4:66832395-66832414 | None:intergenic | 40.0% | |
| TTGCACCTCCACACTATATA+AGG | - | chr4_4:66832396-66832415 | None:intergenic | 40.0% | |
| AGTGGCTCAAATGCTGAATT+TGG | + | chr4_4:66832584-66832603 | Msa0696830:intron | 40.0% | |
| GTGGCTCAAATGCTGAATTT+GGG | + | chr4_4:66832585-66832604 | Msa0696830:intron | 40.0% | |
| TGTGGTCAATTGATCTCACT+TGG | - | chr4_4:66832771-66832790 | None:intergenic | 40.0% | |
| GAAGGAAATGACTGAGAGAA+TGG | - | chr4_4:66833269-66833288 | None:intergenic | 40.0% | |
| CTCAGTCATTTCCTTCATAG+TGG | + | chr4_4:66833273-66833292 | Msa0696830:intron | 40.0% | |
| CAATTGCAGTTCCACTATGA+AGG | - | chr4_4:66833287-66833306 | None:intergenic | 40.0% | |
| GCTAATATGCTCGTGTTCAA+AGG | + | chr4_4:66833381-66833400 | Msa0696830:intron | 40.0% | |
| ! | AATGGGCATTTGGAGCAAGA+TGG | + | chr4_4:66830184-66830203 | Msa0696830:CDS | 45.0% |
| ! | ATGGGCATTTGGAGCAAGAT+GGG | + | chr4_4:66830185-66830204 | Msa0696830:CDS | 45.0% |
| TGATATGGAGGCTGTTGACA+CGG | + | chr4_4:66830222-66830241 | Msa0696830:CDS | 45.0% | |
| GTGCCTTCAAACAAAGGCAA+TGG | + | chr4_4:66830333-66830352 | Msa0696830:CDS | 45.0% | |
| GCCTTCAAACAAAGGCAATG+GGG | + | chr4_4:66830335-66830354 | Msa0696830:CDS | 45.0% | |
| ! | ACCCCATTGCCTTTGTTTGA+AGG | - | chr4_4:66830339-66830358 | None:intergenic | 45.0% |
| TTTGTTTCCCTCAGAAGGAG+GGG | - | chr4_4:66830498-66830517 | None:intergenic | 45.0% | |
| GTTTGTTTCCCTCAGAAGGA+GGG | - | chr4_4:66830499-66830518 | None:intergenic | 45.0% | |
| TGTTTGTTTCCCTCAGAAGG+AGG | - | chr4_4:66830500-66830519 | None:intergenic | 45.0% | |
| TGATGAGGATGTTGACATCG+GGG | + | chr4_4:66830538-66830557 | Msa0696830:CDS | 45.0% | |
| TGTGTCAGTAGTAGTTCCAG+TGG | + | chr4_4:66830632-66830651 | Msa0696830:CDS | 45.0% | |
| CTTCATGCAGATTCGGATTC+AGG | + | chr4_4:66830762-66830781 | Msa0696830:intron | 45.0% | |
| !! | TCAGGAAGTGATTCTGAAGC+TGG | + | chr4_4:66830792-66830811 | Msa0696830:CDS | 45.0% |
| !! | AGTGATTCTGAAGCTGGCAA+TGG | + | chr4_4:66830798-66830817 | Msa0696830:CDS | 45.0% |
| TGGCAATGGTCATTTGTAGC+AGG | + | chr4_4:66830812-66830831 | Msa0696830:intron | 45.0% | |
| GGCAATGGTCATTTGTAGCA+GGG | + | chr4_4:66830813-66830832 | Msa0696830:intron | 45.0% | |
| GCTATAGTGCTTGCATGTGT+TGG | + | chr4_4:66830906-66830925 | Msa0696830:intron | 45.0% | |
| GTAACAGGGGTTGTAGACAT+TGG | + | chr4_4:66831044-66831063 | Msa0696830:intron | 45.0% | |
| ! | GGGTTGTAGACATTGGTTGT+TGG | + | chr4_4:66831051-66831070 | Msa0696830:intron | 45.0% |
| !! | ATTGGTTGTTGGTTTCAGCG+TGG | + | chr4_4:66831062-66831081 | Msa0696830:intron | 45.0% |
| !! | TTGGTTGTTGGTTTCAGCGT+GGG | + | chr4_4:66831063-66831082 | Msa0696830:intron | 45.0% |
| TGGGAATGGCTACTTGGATT+GGG | + | chr4_4:66831082-66831101 | Msa0696830:intron | 45.0% | |
| CACAACGCAAATCATGGATC+AGG | - | chr4_4:66831118-66831137 | None:intergenic | 45.0% | |
| CCTCCCTGATACATACAACA+TGG | - | chr4_4:66831412-66831431 | None:intergenic | 45.0% | |
| CCATGTTGTATGTATCAGGG+AGG | + | chr4_4:66831409-66831428 | Msa0696830:intron | 45.0% | |
| GTTACACAAGACAGCAGCAA+AGG | + | chr4_4:66831951-66831970 | Msa0696830:intron | 45.0% | |
| AGACAGCAGCAAAGGAAACA+AGG | + | chr4_4:66831959-66831978 | Msa0696830:intron | 45.0% | |
| !! | GTTATTGCTGTTCGGTGTTG+GGG | - | chr4_4:66832057-66832076 | None:intergenic | 45.0% |
| !! | CTGTTATTGCTGTTCGGTGT+TGG | - | chr4_4:66832059-66832078 | None:intergenic | 45.0% |
| GACTGCCTCATAACAGCAAA+CGG | + | chr4_4:66832081-66832100 | Msa0696830:intron | 45.0% | |
| ! | AATGTTGATGCGGTGCTAGA+CGG | + | chr4_4:66832226-66832245 | Msa0696830:intron | 45.0% |
| AGCGGTTGCTTCAACTGAAA+CGG | + | chr4_4:66832257-66832276 | Msa0696830:intron | 45.0% | |
| ! | TTTAGCGTCAGAGTGTCTGT+AGG | - | chr4_4:66832295-66832314 | None:intergenic | 45.0% |
| CACTATATAAGGGGGACTCT+CGG | - | chr4_4:66832385-66832404 | None:intergenic | 45.0% | |
| AGAGTCCCCCTTATATAGTG+TGG | + | chr4_4:66832385-66832404 | Msa0696830:intron | 45.0% | |
| CACCTCCACACTATATAAGG+GGG | - | chr4_4:66832393-66832412 | None:intergenic | 45.0% | |
| GCACCTCCACACTATATAAG+GGG | - | chr4_4:66832394-66832413 | None:intergenic | 45.0% | |
| ! | GAGGTGCAAGTATCGTTGTA+AGG | + | chr4_4:66832407-66832426 | Msa0696830:intron | 45.0% |
| GTATCGTTGTAAGGCACATG+TGG | + | chr4_4:66832416-66832435 | Msa0696830:intron | 45.0% | |
| ACGTTACCAGTCGTTTGAAC+TGG | + | chr4_4:66832507-66832526 | Msa0696830:intron | 45.0% | |
| AGAAGACCAGTTCAAACGAC+TGG | - | chr4_4:66832516-66832535 | None:intergenic | 45.0% | |
| !! | ACTGGTCTTCTGTTGTGCTA+CGG | + | chr4_4:66832525-66832544 | Msa0696830:intron | 45.0% |
| ! | TGGGCATTTGGAGCAAGATG+GGG | + | chr4_4:66830186-66830205 | Msa0696830:CDS | 50.0% |
| !! | CTCTCTGGAACTCGATCGAT+TGG | + | chr4_4:66830248-66830267 | Msa0696830:CDS | 50.0% |
| GGAATTGCCTGATAGGGAGA+AGG | + | chr4_4:66830463-66830482 | Msa0696830:intron | 50.0% | |
| GCATCAACCTTCTCCCTATC+AGG | - | chr4_4:66830473-66830492 | None:intergenic | 50.0% | |
| ACAGGTGGGAAATCGTTTGC+TGG | - | chr4_4:66830572-66830591 | None:intergenic | 50.0% | |
| AGCAAACGATTTCCCACCTG+TGG | + | chr4_4:66830571-66830590 | Msa0696830:CDS | 50.0% | |
| CTTGCTCAATCTCCACAGGT+GGG | - | chr4_4:66830586-66830605 | None:intergenic | 50.0% | |
| TCTTGCTCAATCTCCACAGG+TGG | - | chr4_4:66830587-66830606 | None:intergenic | 50.0% | |
| AGAGGTTATACCACTCGACG+AGG | - | chr4_4:66830681-66830700 | None:intergenic | 50.0% | |
| TCGGATTCAGGGAGTTCTTC+AGG | + | chr4_4:66830774-66830793 | Msa0696830:CDS | 50.0% | |
| ATGGTCATTTGTAGCAGGGC+AGG | + | chr4_4:66830817-66830836 | Msa0696830:intron | 50.0% | |
| TGGTCATTTGTAGCAGGGCA+GGG | + | chr4_4:66830818-66830837 | Msa0696830:intron | 50.0% | |
| ! | GGCAGGGCTTTTGGTACTAA+TGG | + | chr4_4:66830834-66830853 | Msa0696830:intron | 50.0% |
| !! | CTAACCGACGTTGGTCTTTG+GGG | - | chr4_4:66830861-66830880 | None:intergenic | 50.0% |
| !! | GCTAACCGACGTTGGTCTTT+GGG | - | chr4_4:66830862-66830881 | None:intergenic | 50.0% |
| ! | CAAAGACCAACGTCGGTTAG+CGG | + | chr4_4:66830861-66830880 | Msa0696830:intron | 50.0% |
| !! | AGTGCTTGCATGTGTTGGCT+AGG | + | chr4_4:66830911-66830930 | Msa0696830:intron | 50.0% |
| !! | TGTTGGTTTCAGCGTGGGAA+TGG | + | chr4_4:66831068-66831087 | Msa0696830:intron | 50.0% |
| GTGGGAATGGCTACTTGGAT+TGG | + | chr4_4:66831081-66831100 | Msa0696830:intron | 50.0% | |
| TGCCTCATAACAGCAAACGG+AGG | + | chr4_4:66832084-66832103 | Msa0696830:intron | 50.0% | |
| GGTTGCTTCAACTGAAACGG+CGG | + | chr4_4:66832260-66832279 | Msa0696830:intron | 50.0% | |
| GTTGCTTCAACTGAAACGGC+GGG | + | chr4_4:66832261-66832280 | Msa0696830:intron | 50.0% | |
| TTGCTTCAACTGAAACGGCG+GGG | + | chr4_4:66832262-66832281 | Msa0696830:intron | 50.0% | |
| GTCCCCCTTATATAGTGTGG+AGG | + | chr4_4:66832388-66832407 | Msa0696830:intron | 50.0% | |
| CATGTGGAGTTCGACAGCTA+AGG | + | chr4_4:66832432-66832451 | Msa0696830:intron | 50.0% | |
| ! | CTGGTCTTCTGTTGTGCTAC+GGG | + | chr4_4:66832526-66832545 | Msa0696830:intron | 50.0% |
| TGGTCTTCTGTTGTGCTACG+GGG | + | chr4_4:66832527-66832546 | Msa0696830:intron | 50.0% | |
| TGACCACACTATCCCACGTT+AGG | + | chr4_4:66832783-66832802 | Msa0696830:intron | 50.0% | |
| CTGTTGACACGGAGACTCTC+TGG | + | chr4_4:66830233-66830252 | Msa0696830:CDS | 55.0% | |
| GGTGAGCAAGATTAAGCGGC+AGG | + | chr4_4:66830290-66830309 | Msa0696830:intron | 55.0% | |
| GATTAAGCGGCAGGCGCTAA+TGG | + | chr4_4:66830299-66830318 | Msa0696830:CDS | 55.0% | |
| TGATGCAACCCCTCCTTCTG+AGG | + | chr4_4:66830487-66830506 | Msa0696830:CDS | 55.0% | |
| GATGCAACCCCTCCTTCTGA+GGG | + | chr4_4:66830488-66830507 | Msa0696830:CDS | 55.0% | |
| ! | TTGTAGCAGGGCAGGGCTTT+TGG | + | chr4_4:66830825-66830844 | Msa0696830:intron | 55.0% |
| TGGTCCCCAAAGACCAACGT+CGG | + | chr4_4:66830854-66830873 | Msa0696830:intron | 55.0% | |
| !! | CGCTAACCGACGTTGGTCTT+TGG | - | chr4_4:66830863-66830882 | None:intergenic | 55.0% |
| CTTGATCCGCTAACCGACGT+TGG | - | chr4_4:66830870-66830889 | None:intergenic | 55.0% | |
| TCAGCGTGGGAATGGCTACT+TGG | + | chr4_4:66831076-66831095 | Msa0696830:intron | 55.0% | |
| !! | GGCCTCCGTTTGCTGTTATG+AGG | - | chr4_4:66832089-66832108 | None:intergenic | 55.0% |
| TGCTAGACGGTGGTTGCAAG+CGG | + | chr4_4:66832239-66832258 | Msa0696830:intron | 55.0% | |
| TGCTTCAACTGAAACGGCGG+GGG | + | chr4_4:66832263-66832282 | Msa0696830:intron | 55.0% | |
| AACACGCACCCTCATCGTGA+GGG | - | chr4_4:66832557-66832576 | None:intergenic | 55.0% | |
| TGGCCTAACGTGGGATAGTG+TGG | - | chr4_4:66832789-66832808 | None:intergenic | 55.0% | |
| TCCAGTGGTTCCAGCAGCTC+TGG | + | chr4_4:66830647-66830666 | Msa0696830:CDS | 60.0% | |
| CCAGTGGTTCCAGCAGCTCT+GGG | + | chr4_4:66830648-66830667 | Msa0696830:CDS | 60.0% | |
| GGAATCACTCCCAGAGCTGC+TGG | - | chr4_4:66830660-66830679 | None:intergenic | 60.0% | |
| GGGAGTGATTCCTCGTCGAG+TGG | + | chr4_4:66830668-66830687 | Msa0696830:CDS | 60.0% | |
| ! | GTTGATGCGGTGCTAGACGG+TGG | + | chr4_4:66832229-66832248 | Msa0696830:intron | 60.0% |
| CAACACGCACCCTCATCGTG+AGG | - | chr4_4:66832558-66832577 | None:intergenic | 60.0% | |
| GGGTGCGTGTTGCGACTAAG+TGG | + | chr4_4:66832566-66832585 | Msa0696830:intron | 60.0% | |
| CCCAGAGCTGCTGGAACCAC+TGG | - | chr4_4:66830651-66830670 | None:intergenic | 65.0% | |
| GGGACTCTCGGCAGTCTCCA+AGG | - | chr4_4:66832373-66832392 | None:intergenic | 65.0% | |
| GGGGACCTCCCTCACGATGA+GGG | + | chr4_4:66832546-66832565 | Msa0696830:intron | 65.0% | |
| ACGCACCCTCATCGTGAGGG+AGG | - | chr4_4:66832554-66832573 | None:intergenic | 65.0% | |
| CGGGGACCTCCCTCACGATG+AGG | + | chr4_4:66832545-66832564 | Msa0696830:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 66830151 | 66833466 | 66830151 | ID=Msa0696830;Name=Msa0696830 |
| chr4_4 | mRNA | 66830151 | 66833466 | 66830151 | ID=Msa0696830-mRNA-1;Parent=Msa0696830;Name=Msa0696830-mRNA-1;_AED=0.47;_eAED=0.48;_QI=0|0|0|1|0.5|0.4|5|0|161 |
| chr4_4 | exon | 66830151 | 66830290 | 66830151 | ID=Msa0696830-mRNA-1:exon:19493;Parent=Msa0696830-mRNA-1 |
| chr4_4 | exon | 66830296 | 66830356 | 66830296 | ID=Msa0696830-mRNA-1:exon:19494;Parent=Msa0696830-mRNA-1 |
| chr4_4 | exon | 66830464 | 66830689 | 66830464 | ID=Msa0696830-mRNA-1:exon:19495;Parent=Msa0696830-mRNA-1 |
| chr4_4 | exon | 66830772 | 66830819 | 66830772 | ID=Msa0696830-mRNA-1:exon:19496;Parent=Msa0696830-mRNA-1 |
| chr4_4 | exon | 66833456 | 66833466 | 66833456 | ID=Msa0696830-mRNA-1:exon:19497;Parent=Msa0696830-mRNA-1 |
| chr4_4 | CDS | 66830151 | 66830290 | 66830151 | ID=Msa0696830-mRNA-1:cds;Parent=Msa0696830-mRNA-1 |
| chr4_4 | CDS | 66830296 | 66830356 | 66830296 | ID=Msa0696830-mRNA-1:cds;Parent=Msa0696830-mRNA-1 |
| chr4_4 | CDS | 66830464 | 66830689 | 66830464 | ID=Msa0696830-mRNA-1:cds;Parent=Msa0696830-mRNA-1 |
| chr4_4 | CDS | 66830772 | 66830819 | 66830772 | ID=Msa0696830-mRNA-1:cds;Parent=Msa0696830-mRNA-1 |
| chr4_4 | CDS | 66833456 | 66833466 | 66833456 | ID=Msa0696830-mRNA-1:cds;Parent=Msa0696830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
