Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0822400 | XP_003617368.1 | 93.658 | 473 | 27 | 2 | 1 | 472 | 1 | 471 | 0.0 | 922 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0822400 | sp|A1XWY7|CFAT_PETHY | 54.043 | 470 | 192 | 10 | 3 | 470 | 1 | 448 | 1.01e-165 | 478 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0822400 | G7K3A2 | 93.658 | 473 | 27 | 2 | 1 | 472 | 1 | 471 | 0.0 | 922 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0013040 | Msa0822400 | 0.805878 | 1.079003e-49 | -8.615850e-47 |
Msa0631700 | Msa0822400 | 0.808284 | 3.340375e-50 | -8.615850e-47 |
Msa0633940 | Msa0822400 | 0.840569 | 8.034771e-58 | -8.615850e-47 |
Msa0633970 | Msa0822400 | 0.836341 | 9.906425e-57 | -8.615850e-47 |
Msa0643190 | Msa0822400 | 0.830425 | 2.958140e-55 | -8.615850e-47 |
Msa0671640 | Msa0822400 | 0.800194 | 1.615954e-48 | -8.615850e-47 |
Msa0708680 | Msa0822400 | 0.817038 | 4.057655e-52 | -8.615850e-47 |
Msa0715220 | Msa0822400 | 0.814758 | 1.309048e-51 | -8.615850e-47 |
Msa0720870 | Msa0822400 | 0.803222 | 3.863537e-49 | -8.615850e-47 |
Msa0741360 | Msa0822400 | 0.866872 | 2.074504e-65 | -8.615850e-47 |
Msa0757120 | Msa0822400 | 0.807347 | 5.284742e-50 | -8.615850e-47 |
Msa0777060 | Msa0822400 | 0.801862 | 7.369434e-49 | -8.615850e-47 |
Msa0786940 | Msa0822400 | 0.812830 | 3.480221e-51 | -8.615850e-47 |
Msa0798150 | Msa0822400 | 0.812076 | 5.085530e-51 | -8.615850e-47 |
Msa0814160 | Msa0822400 | 0.831850 | 1.321349e-55 | -8.615850e-47 |
Msa0822400 | Msa0822410 | 0.891001 | 5.913018e-74 | -8.615850e-47 |
Msa0822400 | Msa0854840 | 0.804673 | 1.929469e-49 | -8.615850e-47 |
Msa0822400 | Msa0861730 | 0.843841 | 1.093293e-58 | -8.615850e-47 |
Msa0822400 | Msa0896920 | 0.813159 | 2.946943e-51 | -8.615850e-47 |
Msa0822400 | Msa0935440 | 0.800949 | 1.133658e-48 | -8.615850e-47 |
Msa0822400 | Msa0946010 | 0.813697 | 2.244924e-51 | -8.615850e-47 |
Msa0822400 | Msa1006170 | 0.813922 | 2.003120e-51 | -8.615850e-47 |
Msa0822400 | Msa1022490 | 0.812766 | 3.594653e-51 | -8.615850e-47 |
Msa0822400 | Msa1022510 | 0.821678 | 3.554275e-53 | -8.615850e-47 |
Msa0822400 | Msa1024350 | 0.819556 | 1.091669e-52 | -8.615850e-47 |
Msa0822400 | Msa1030320 | 0.803830 | 2.890624e-49 | -8.615850e-47 |
Msa0822400 | Msa1061670 | 0.802255 | 6.117766e-49 | -8.615850e-47 |
Msa0822400 | Msa1106680 | 0.829313 | 5.519955e-55 | -8.615850e-47 |
Msa0822400 | Msa1106960 | 0.800583 | 1.346171e-48 | -8.615850e-47 |
Msa0822400 | Msa1108560 | 0.801287 | 9.667732e-49 | -8.615850e-47 |
Msa0822400 | Msa1120680 | 0.806114 | 9.624168e-50 | -8.615850e-47 |
Msa0822400 | Msa1147030 | 0.827268 | 1.718323e-54 | -8.615850e-47 |
Msa0822400 | Msa1156240 | 0.807951 | 3.933386e-50 | -8.615850e-47 |
Msa0822400 | Msa1162750 | 0.804825 | 1.793795e-49 | -8.615850e-47 |
Msa0822400 | Msa1170340 | 0.800051 | 1.727556e-48 | -8.615850e-47 |
Msa0822400 | Msa1181090 | 0.826547 | 2.555530e-54 | -8.615850e-47 |
Msa0822400 | Msa1191350 | 0.802604 | 5.185906e-49 | -8.615850e-47 |
Msa0822400 | Msa1225890 | 0.803480 | 3.417086e-49 | -8.615850e-47 |
Msa0822400 | Msa1235330 | 0.814542 | 1.461003e-51 | -8.615850e-47 |
Msa0822400 | Msa1238250 | 0.804564 | 2.033464e-49 | -8.615850e-47 |
Msa0822400 | Msa1267990 | 0.811294 | 7.522652e-51 | -8.615850e-47 |
Msa0822400 | Msa1300610 | 0.803587 | 3.246627e-49 | -8.615850e-47 |
Msa0822400 | Msa1319030 | 0.807467 | 4.983747e-50 | -8.615850e-47 |
Msa0822400 | Msa1319190 | 0.815722 | 7.991419e-52 | -8.615850e-47 |
Msa0822400 | Msa1321970 | 0.809586 | 1.758281e-50 | -8.615850e-47 |
Msa0822400 | Msa1406840 | 0.837855 | 4.063918e-57 | -8.615850e-47 |
Msa0822400 | Msa1411550 | 0.819692 | 1.016225e-52 | -8.615850e-47 |
Msa0822400 | Msa1445900 | 0.810445 | 1.148737e-50 | -8.615850e-47 |
Msa0822400 | Msa1459610 | 0.817670 | 2.923104e-52 | -8.615850e-47 |
Msa0134570 | Msa0822400 | 0.804075 | 2.570781e-49 | -8.615850e-47 |
Msa0195580 | Msa0822400 | 0.811141 | 8.120859e-51 | -8.615850e-47 |
Msa0220090 | Msa0822400 | 0.800821 | 1.203993e-48 | -8.615850e-47 |
Msa0366510 | Msa0822400 | 0.821494 | 3.919673e-53 | -8.615850e-47 |
Msa0374040 | Msa0822400 | 0.834288 | 3.268395e-56 | -8.615850e-47 |
Msa0472390 | Msa0822400 | 0.805334 | 1.403508e-49 | -8.615850e-47 |
Msa0261400 | Msa0822400 | 0.808493 | 3.015014e-50 | -8.615850e-47 |
Msa0281190 | Msa0822400 | 0.804541 | 2.056335e-49 | -8.615850e-47 |
Msa0326770 | Msa0822400 | 0.801944 | 7.090148e-49 | -8.615850e-47 |
Msa0491780 | Msa0822400 | 0.800031 | 1.744058e-48 | -8.615850e-47 |
Msa0507600 | Msa0822400 | 0.819831 | 9.444711e-53 | -8.615850e-47 |
Msa0515130 | Msa0822400 | 0.837324 | 5.559199e-57 | -8.615850e-47 |
Msa0555920 | Msa0822400 | 0.809428 | 1.901554e-50 | -8.615850e-47 |
Msa0580100 | Msa0822400 | 0.820205 | 7.754843e-53 | -8.615850e-47 |
Msa0583390 | Msa0822400 | 0.802993 | 4.308844e-49 | -8.615850e-47 |
Msa0591490 | Msa0822400 | 0.815607 | 8.478101e-52 | -8.615850e-47 |
Msa0593870 | Msa0822400 | 0.844771 | 6.148812e-59 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0822400 | MtrunA17_Chr5g0442701 | 93.658 | 473 | 27 | 2 | 1 | 472 | 1 | 471 | 0.0 | 922 |
Msa0822400 | MtrunA17_Chr5g0442691 | 92.600 | 473 | 32 | 2 | 1 | 472 | 24 | 494 | 0.0 | 912 |
Msa0822400 | MtrunA17_Chr5g0442721 | 79.915 | 473 | 94 | 1 | 1 | 472 | 1 | 473 | 0.0 | 783 |
Msa0822400 | MtrunA17_Chr3g0095731 | 67.872 | 470 | 130 | 7 | 10 | 470 | 11 | 468 | 0.0 | 630 |
Msa0822400 | MtrunA17_Chr3g0095721 | 64.894 | 470 | 148 | 5 | 10 | 470 | 11 | 472 | 0.0 | 615 |
Msa0822400 | MtrunA17_Chr5g0408911 | 36.386 | 415 | 236 | 11 | 29 | 440 | 39 | 428 | 5.81e-72 | 234 |
Msa0822400 | MtrunA17_Chr8g0386141 | 27.742 | 465 | 281 | 19 | 7 | 458 | 4 | 426 | 1.85e-33 | 131 |
Msa0822400 | MtrunA17_Chr8g0371821 | 24.289 | 457 | 299 | 14 | 10 | 455 | 3 | 423 | 2.37e-32 | 127 |
Msa0822400 | MtrunA17_Chr2g0334001 | 24.838 | 463 | 292 | 17 | 10 | 455 | 3 | 426 | 4.22e-30 | 121 |
Msa0822400 | MtrunA17_Chr4g0001861 | 25.627 | 359 | 233 | 11 | 65 | 414 | 55 | 388 | 5.76e-29 | 118 |
Msa0822400 | MtrunA17_Chr3g0132001 | 27.528 | 356 | 218 | 12 | 66 | 413 | 66 | 389 | 1.32e-28 | 117 |
Msa0822400 | MtrunA17_Chr7g0253541 | 29.032 | 372 | 216 | 15 | 66 | 412 | 60 | 408 | 7.21e-28 | 115 |
Msa0822400 | MtrunA17_Chr1g0165681 | 26.683 | 401 | 233 | 14 | 63 | 436 | 61 | 427 | 2.90e-27 | 114 |
Msa0822400 | MtrunA17_Chr4g0054081 | 25.000 | 464 | 301 | 15 | 23 | 465 | 19 | 456 | 4.32e-27 | 113 |
Msa0822400 | MtrunA17_Chr5g0433641 | 25.758 | 396 | 247 | 14 | 66 | 447 | 65 | 427 | 8.34e-27 | 112 |
Msa0822400 | MtrunA17_Chr4g0072041 | 23.932 | 468 | 300 | 14 | 23 | 465 | 24 | 460 | 1.61e-26 | 111 |
Msa0822400 | MtrunA17_Chr7g0273721 | 25.849 | 383 | 237 | 14 | 49 | 415 | 43 | 394 | 4.64e-26 | 110 |
Msa0822400 | MtrunA17_Chr7g0224391 | 25.653 | 421 | 267 | 15 | 4 | 414 | 9 | 393 | 5.71e-26 | 109 |
Msa0822400 | MtrunA17_Chr7g0273791 | 23.929 | 397 | 258 | 11 | 63 | 447 | 62 | 426 | 1.09e-25 | 109 |
Msa0822400 | MtrunA17_Chr1g0165661 | 25.558 | 403 | 235 | 15 | 63 | 436 | 61 | 427 | 2.96e-25 | 108 |
Msa0822400 | MtrunA17_Chr7g0273761 | 26.107 | 429 | 267 | 16 | 37 | 446 | 402 | 799 | 3.24e-25 | 109 |
Msa0822400 | MtrunA17_Chr7g0273761 | 24.549 | 277 | 177 | 9 | 140 | 415 | 32 | 277 | 9.34e-15 | 77.0 |
Msa0822400 | MtrunA17_Chr1g0191081 | 26.273 | 373 | 229 | 15 | 63 | 424 | 70 | 407 | 8.47e-25 | 106 |
Msa0822400 | MtrunA17_Chr7g0273781 | 24.460 | 417 | 265 | 14 | 49 | 447 | 75 | 459 | 1.31e-24 | 106 |
Msa0822400 | MtrunA17_Chr1g0165671 | 25.500 | 400 | 237 | 14 | 63 | 436 | 79 | 443 | 9.91e-24 | 103 |
Msa0822400 | MtrunA17_Chr7g0273731 | 24.211 | 380 | 244 | 12 | 63 | 430 | 145 | 492 | 9.38e-23 | 101 |
Msa0822400 | MtrunA17_Chr3g0087401 | 25.248 | 404 | 263 | 12 | 63 | 446 | 51 | 435 | 2.34e-22 | 99.4 |
Msa0822400 | MtrunA17_Chr2g0306321 | 24.359 | 390 | 241 | 15 | 45 | 415 | 58 | 412 | 3.13e-22 | 99.0 |
Msa0822400 | MtrunA17_Chr2g0311401 | 25.688 | 327 | 198 | 13 | 139 | 455 | 5 | 296 | 7.92e-22 | 95.5 |
Msa0822400 | MtrunA17_Chr7g0253501 | 27.848 | 395 | 233 | 19 | 66 | 429 | 55 | 428 | 8.55e-22 | 97.8 |
Msa0822400 | MtrunA17_Chr7g0253531 | 25.916 | 382 | 227 | 17 | 66 | 414 | 55 | 413 | 2.61e-21 | 96.3 |
Msa0822400 | MtrunA17_Chr4g0027071 | 24.318 | 403 | 262 | 14 | 66 | 451 | 69 | 445 | 7.62e-18 | 85.9 |
Msa0822400 | MtrunA17_Chr2g0283361 | 24.190 | 401 | 259 | 17 | 24 | 413 | 18 | 384 | 8.62e-18 | 85.5 |
Msa0822400 | MtrunA17_Chr3g0134041 | 22.995 | 374 | 232 | 10 | 60 | 413 | 60 | 397 | 1.63e-17 | 84.7 |
Msa0822400 | MtrunA17_Chr3g0123061 | 23.557 | 433 | 258 | 20 | 6 | 426 | 1 | 372 | 3.03e-16 | 80.5 |
Msa0822400 | MtrunA17_Chr3g0113181 | 24.031 | 387 | 234 | 13 | 60 | 413 | 60 | 419 | 6.29e-16 | 80.1 |
Msa0822400 | MtrunA17_Chr6g0470591 | 26.518 | 313 | 196 | 11 | 66 | 364 | 71 | 363 | 9.65e-16 | 79.3 |
Msa0822400 | MtrunA17_Chr7g0252731 | 25.435 | 460 | 255 | 20 | 7 | 434 | 14 | 417 | 1.50e-15 | 78.6 |
Msa0822400 | MtrunA17_Chr5g0438701 | 23.370 | 368 | 228 | 14 | 59 | 414 | 52 | 377 | 2.01e-15 | 78.2 |
Msa0822400 | MtrunA17_Chr8g0374911 | 24.257 | 404 | 241 | 16 | 35 | 413 | 57 | 420 | 2.84e-15 | 77.8 |
Msa0822400 | MtrunA17_Chr3g0134091 | 23.529 | 323 | 196 | 13 | 49 | 348 | 48 | 342 | 4.99e-15 | 77.0 |
Msa0822400 | MtrunA17_Chr4g0053111 | 24.468 | 376 | 217 | 13 | 66 | 413 | 62 | 398 | 5.22e-15 | 77.0 |
Msa0822400 | MtrunA17_Chr3g0134071 | 23.181 | 371 | 233 | 11 | 61 | 411 | 65 | 403 | 5.81e-15 | 77.0 |
Msa0822400 | MtrunA17_Chr3g0125001 | 24.500 | 400 | 236 | 16 | 35 | 413 | 31 | 385 | 1.03e-14 | 75.9 |
Msa0822400 | MtrunA17_Chr1g0165711 | 26.724 | 232 | 147 | 7 | 63 | 286 | 61 | 277 | 1.57e-14 | 75.5 |
Msa0822400 | MtrunA17_Chr4g0053061 | 23.267 | 404 | 245 | 15 | 35 | 413 | 64 | 427 | 2.39e-14 | 75.1 |
Msa0822400 | MtrunA17_Chr3g0141851 | 21.957 | 419 | 252 | 13 | 18 | 411 | 20 | 388 | 3.53e-14 | 74.3 |
Msa0822400 | MtrunA17_Chr8g0376891 | 22.093 | 430 | 265 | 14 | 8 | 414 | 1 | 383 | 5.22e-14 | 73.9 |
Msa0822400 | MtrunA17_Chr4g0010121 | 23.810 | 420 | 233 | 16 | 27 | 413 | 68 | 433 | 1.26e-13 | 72.8 |
Msa0822400 | MtrunA17_Chr3g0134061 | 23.000 | 400 | 236 | 17 | 49 | 413 | 47 | 409 | 1.43e-13 | 72.8 |
Msa0822400 | MtrunA17_Chr7g0270771 | 28.947 | 152 | 93 | 3 | 66 | 202 | 55 | 206 | 1.06e-12 | 68.2 |
Msa0822400 | MtrunA17_Chr8g0354371 | 24.523 | 367 | 219 | 13 | 66 | 413 | 64 | 391 | 1.22e-12 | 69.7 |
Msa0822400 | MtrunA17_Chr4g0010311 | 23.644 | 461 | 289 | 16 | 27 | 466 | 23 | 441 | 1.04e-11 | 66.6 |
Msa0822400 | MtrunA17_Chr3g0106761 | 22.785 | 316 | 204 | 9 | 71 | 370 | 19 | 310 | 4.29e-11 | 64.7 |
Msa0822400 | MtrunA17_Chr4g0010331 | 24.119 | 369 | 223 | 12 | 66 | 413 | 55 | 387 | 5.47e-11 | 64.3 |
Msa0822400 | MtrunA17_Chr4g0010381 | 25.203 | 369 | 224 | 15 | 66 | 413 | 55 | 392 | 6.72e-11 | 64.3 |
Msa0822400 | MtrunA17_Chr3g0087221 | 25.337 | 371 | 229 | 15 | 66 | 413 | 55 | 400 | 7.00e-11 | 64.3 |
Msa0822400 | MtrunA17_Chr3g0106661 | 24.615 | 325 | 200 | 12 | 66 | 369 | 68 | 368 | 7.79e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0822400 | AT1G32910.1 | 58.051 | 472 | 165 | 11 | 8 | 470 | 11 | 458 | 7.39e-180 | 511 |
Msa0822400 | AT1G78990.1 | 56.466 | 464 | 180 | 8 | 8 | 470 | 11 | 453 | 2.75e-179 | 510 |
Msa0822400 | AT5G16410.1 | 51.368 | 475 | 190 | 14 | 8 | 470 | 34 | 479 | 2.07e-158 | 458 |
Msa0822400 | AT1G31490.1 | 36.652 | 442 | 238 | 12 | 8 | 440 | 4 | 412 | 5.38e-77 | 248 |
Msa0822400 | AT5G48930.1 | 24.837 | 459 | 302 | 16 | 8 | 455 | 1 | 427 | 7.44e-35 | 135 |
Msa0822400 | AT5G41040.2 | 25.414 | 362 | 229 | 11 | 63 | 414 | 66 | 396 | 1.59e-26 | 112 |
Msa0822400 | AT5G41040.1 | 25.414 | 362 | 229 | 11 | 63 | 414 | 82 | 412 | 2.22e-26 | 111 |
Msa0822400 | AT2G19070.1 | 23.820 | 466 | 311 | 16 | 18 | 465 | 12 | 451 | 5.21e-26 | 110 |
Msa0822400 | AT5G57840.1 | 26.496 | 468 | 279 | 19 | 8 | 451 | 1 | 427 | 8.94e-26 | 109 |
Msa0822400 | AT3G48720.1 | 26.902 | 368 | 224 | 11 | 58 | 414 | 53 | 386 | 5.44e-25 | 107 |
Msa0822400 | AT3G03480.1 | 25.214 | 468 | 267 | 18 | 6 | 436 | 15 | 436 | 1.21e-24 | 106 |
Msa0822400 | AT5G17540.1 | 24.786 | 468 | 265 | 18 | 4 | 439 | 3 | 415 | 3.38e-24 | 105 |
Msa0822400 | AT2G40230.1 | 24.265 | 408 | 264 | 12 | 59 | 455 | 52 | 425 | 4.08e-21 | 95.9 |
Msa0822400 | AT3G50270.1 | 27.660 | 376 | 217 | 16 | 60 | 413 | 56 | 398 | 5.06e-21 | 95.9 |
Msa0822400 | AT5G63560.1 | 24.860 | 358 | 222 | 11 | 66 | 413 | 61 | 381 | 1.10e-20 | 94.7 |
Msa0822400 | AT1G27620.1 | 22.195 | 401 | 265 | 13 | 66 | 455 | 58 | 422 | 2.32e-20 | 93.6 |
Msa0822400 | AT3G50280.1 | 24.661 | 369 | 229 | 14 | 63 | 413 | 56 | 393 | 5.38e-20 | 92.8 |
Msa0822400 | AT1G65450.1 | 26.016 | 369 | 226 | 15 | 66 | 418 | 72 | 409 | 1.38e-19 | 91.7 |
Msa0822400 | AT1G28680.1 | 25.776 | 419 | 262 | 19 | 12 | 413 | 1 | 387 | 8.24e-19 | 89.0 |
Msa0822400 | AT1G24430.1 | 24.590 | 427 | 248 | 18 | 8 | 413 | 3 | 376 | 5.74e-18 | 86.3 |
Msa0822400 | AT5G07860.1 | 21.635 | 416 | 250 | 13 | 27 | 413 | 30 | 398 | 9.66e-17 | 82.8 |
Msa0822400 | AT3G30280.1 | 25.285 | 439 | 266 | 14 | 8 | 431 | 4 | 395 | 1.29e-16 | 82.4 |
Msa0822400 | AT5G38130.1 | 24.208 | 442 | 263 | 20 | 9 | 429 | 36 | 426 | 1.39e-16 | 82.4 |
Msa0822400 | AT2G39980.1 | 24.163 | 418 | 233 | 16 | 45 | 413 | 47 | 429 | 4.53e-16 | 80.9 |
Msa0822400 | AT5G07080.1 | 24.390 | 369 | 235 | 11 | 60 | 413 | 64 | 403 | 2.08e-15 | 78.6 |
Msa0822400 | AT3G50300.1 | 24.119 | 369 | 231 | 15 | 63 | 413 | 56 | 393 | 1.27e-14 | 76.3 |
Msa0822400 | AT5G67160.1 | 24.480 | 433 | 255 | 19 | 59 | 472 | 49 | 428 | 7.03e-14 | 73.9 |
Msa0822400 | AT5G47980.1 | 22.897 | 428 | 264 | 12 | 6 | 412 | 1 | 383 | 7.96e-14 | 73.9 |
Msa0822400 | AT5G01210.1 | 25.000 | 384 | 203 | 15 | 77 | 413 | 73 | 418 | 8.90e-14 | 73.9 |
Msa0822400 | AT4G15390.1 | 23.168 | 423 | 271 | 15 | 8 | 414 | 6 | 390 | 9.70e-14 | 73.6 |
Msa0822400 | AT4G15390.2 | 23.168 | 423 | 271 | 15 | 8 | 414 | 6 | 390 | 9.70e-14 | 73.6 |
Msa0822400 | AT5G47950.1 | 23.571 | 420 | 255 | 15 | 8 | 414 | 4 | 370 | 1.35e-13 | 72.8 |
Msa0822400 | AT2G25150.1 | 23.433 | 367 | 235 | 12 | 63 | 413 | 64 | 400 | 1.59e-13 | 72.8 |
Msa0822400 | AT1G24420.2 | 22.902 | 441 | 261 | 17 | 6 | 419 | 1 | 389 | 5.43e-13 | 71.2 |
Msa0822400 | AT1G24420.1 | 22.902 | 441 | 261 | 17 | 6 | 419 | 1 | 389 | 5.43e-13 | 71.2 |
Msa0822400 | AT5G42830.1 | 23.770 | 366 | 230 | 14 | 66 | 413 | 64 | 398 | 7.84e-13 | 70.9 |
Msa0822400 | AT3G50290.1 | 24.286 | 280 | 177 | 11 | 136 | 410 | 20 | 269 | 3.70e-11 | 64.3 |
Msa0822400 | AT5G07870.1 | 22.535 | 355 | 225 | 15 | 27 | 357 | 30 | 358 | 4.18e-11 | 65.5 |
Find 129 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCGATTATGAATTCATATTT+TGG | 0.139298 | 5_3:-60773579 | Msa0822400:CDS |
TTCTGCTTTCTTGTGGAAAA+TGG | 0.174817 | 5_3:-60773703 | Msa0822400:CDS |
CCAGAGTCGAAGGTTGATTT+TGG | 0.189640 | 5_3:-60773315 | Msa0822400:CDS |
TAGTATATGCGACTTATTAT+TGG | 0.243557 | 5_3:+60773813 | None:intergenic |
AGCACACCATGTTTCTTCTT+TGG | 0.268793 | 5_3:+60774433 | None:intergenic |
TTAATATCAGAGTCAGATTC+AGG | 0.280399 | 5_3:+60773843 | None:intergenic |
GTTTCTTATTATGCCTTTGC+TGG | 0.282844 | 5_3:-60774598 | Msa0822400:CDS |
ACATGGTGTGCTTGCTGTTC+AGG | 0.312822 | 5_3:-60774422 | Msa0822400:intron |
GGATGGAAGGTGGGCGTCGT+GGG | 0.321410 | 5_3:+60773922 | None:intergenic |
AAGAACACACCGACATCAAC+AGG | 0.337593 | 5_3:+60774703 | None:intergenic |
ATCATTGGGCTGAGCCATTT+CGG | 0.339987 | 5_3:+60773998 | None:intergenic |
TAAGGGACACTTGCACTTCA+TGG | 0.343370 | 5_3:-60773175 | Msa0822400:CDS |
GGTGACAGAGGAGCATTTCT+TGG | 0.346724 | 5_3:-60773454 | Msa0822400:CDS |
ATTTCTTGGGTTTAATAGAT+TGG | 0.349608 | 5_3:-60773440 | Msa0822400:CDS |
GAAGAGCATCGTCCAGTTCC+TGG | 0.354253 | 5_3:-60773414 | Msa0822400:CDS |
TGGATGGAAGGTGGGCGTCG+TGG | 0.357861 | 5_3:+60773921 | None:intergenic |
TGCCAATGCCAAGCCCTAAA+AGG | 0.358606 | 5_3:-60773230 | Msa0822400:CDS |
TTTCCTTGGGGAGGTAGTGC+TGG | 0.358995 | 5_3:-60773261 | Msa0822400:CDS |
AGTATATGCGACTTATTATT+GGG | 0.359817 | 5_3:+60773814 | None:intergenic |
AAGGAACATGTTTGCAGAAT+AGG | 0.360809 | 5_3:+60774031 | None:intergenic |
TTCCCTTCTACAGTTTCATC+TGG | 0.371632 | 5_3:+60774463 | None:intergenic |
CGAAAACAAGGTTGCGTTGT+TGG | 0.373331 | 5_3:+60773960 | None:intergenic |
ATTTCTTTAGACCAGTCTCT+TGG | 0.380544 | 5_3:-60773137 | Msa0822400:CDS |
TCAGAGTCAGATTCAGGTTC+AGG | 0.387820 | 5_3:+60773849 | None:intergenic |
GATCAAAGACTTGTTATCAT+TGG | 0.392905 | 5_3:+60773983 | None:intergenic |
TTTCTTGGGTTTAATAGATT+GGG | 0.393187 | 5_3:-60773439 | Msa0822400:CDS |
CCAAAATCAACCTTCGACTC+TGG | 0.403209 | 5_3:+60773315 | None:intergenic |
ATCAAAGACTTGTTATCATT+GGG | 0.404681 | 5_3:+60773984 | None:intergenic |
ATTAAATAAAGGTTTGATAG+TGG | 0.406685 | 5_3:+60774733 | None:intergenic |
CAAACATGTTCCTTGTATCA+TGG | 0.413069 | 5_3:-60774022 | Msa0822400:CDS |
CTAATCGCTAAAATGTGTAT+TGG | 0.419429 | 5_3:-60774832 | None:intergenic |
TTTCTTTAGACCAGTCTCTT+GGG | 0.423523 | 5_3:-60773136 | Msa0822400:CDS |
ATCCTTGCCAATCCAGGAAC+TGG | 0.426912 | 5_3:+60773402 | None:intergenic |
CCTTGTATCATGGGCCGAAA+TGG | 0.428090 | 5_3:-60774012 | Msa0822400:CDS |
CCAACATTTGTGGTATCTTC+AGG | 0.429306 | 5_3:-60773348 | Msa0822400:CDS |
GAAAACAAGGTTGCGTTGTT+GGG | 0.433945 | 5_3:+60773961 | None:intergenic |
AATCCAGATGAAACTGTAGA+AGG | 0.442984 | 5_3:-60774466 | Msa0822400:CDS |
GTGACAGAGGAGCATTTCTT+GGG | 0.453426 | 5_3:-60773453 | Msa0822400:CDS |
ATGAAGTGCAAGTGTCCCTT+AGG | 0.455932 | 5_3:+60773177 | None:intergenic |
TTTCCACAAGAAAGCAGAAA+AGG | 0.464789 | 5_3:+60773707 | None:intergenic |
CGCTACCAATGCAAGAGCAT+TGG | 0.468968 | 5_3:-60774759 | Msa0822400:CDS |
GCTCTACATGCACCTTCCTA+AGG | 0.469205 | 5_3:-60773193 | Msa0822400:CDS |
GTCTAAAGAAATGAGGAGCC+TGG | 0.472034 | 5_3:+60773148 | None:intergenic |
TGGGTGCCAGTAGTAATTAT+AGG | 0.473421 | 5_3:+60774667 | None:intergenic |
TATGACCAACGAGGAAATAG+TGG | 0.494458 | 5_3:-60774788 | Msa0822400:CDS |
AGCTGCCACTATTTCCTCGT+TGG | 0.494647 | 5_3:+60774783 | None:intergenic |
CAATAAATCCTTGCCAATCC+AGG | 0.495236 | 5_3:+60773396 | None:intergenic |
TCAGATTCAGGTTCAGGTGG+TGG | 0.495798 | 5_3:+60773855 | None:intergenic |
GATGAAATGTGGTGGATTAG+TGG | 0.498028 | 5_3:-60774087 | Msa0822400:CDS |
GGCACCCACCATAGCATTGT+GGG | 0.501789 | 5_3:-60774652 | Msa0822400:CDS |
AGGATTTATTGTGGTAGCAC+TGG | 0.506494 | 5_3:-60773384 | Msa0822400:CDS |
GGTTGATAATCCGCTATGTT+GGG | 0.513429 | 5_3:-60773511 | Msa0822400:CDS |
CTTGCACTTCATGGAGGCCC+AGG | 0.516007 | 5_3:-60773166 | Msa0822400:CDS |
CCATTTCGGCCCATGATACA+AGG | 0.516374 | 5_3:+60774012 | None:intergenic |
ACTACCACCATTGTTTGAGT+TGG | 0.517260 | 5_3:+60773752 | None:intergenic |
GTGAAGGATGGATGGAAGGT+GGG | 0.517707 | 5_3:+60773913 | None:intergenic |
GCATCGTCCAGTTCCTGGAT+TGG | 0.519656 | 5_3:-60773409 | Msa0822400:CDS |
TCAAACATCCCACAATGCTA+TGG | 0.522391 | 5_3:+60774644 | None:intergenic |
GTCATAAAGTGAAGGATGGA+TGG | 0.526884 | 5_3:+60773905 | None:intergenic |
TTTGTTAATCTACCACCATA+GGG | 0.527591 | 5_3:+60773540 | None:intergenic |
TCACTAGCCAACTCAAACAA+TGG | 0.529140 | 5_3:-60773759 | Msa0822400:CDS |
GGTAGCACTGGTGGAGAAGA+AGG | 0.530503 | 5_3:-60773372 | Msa0822400:CDS |
TTTCTTGTGGAAAATGGTTG+CGG | 0.534078 | 5_3:-60773697 | Msa0822400:CDS |
ATCCAGATGAAACTGTAGAA+GGG | 0.535674 | 5_3:-60774465 | Msa0822400:CDS |
AGTGAAGGATGGATGGAAGG+TGG | 0.539276 | 5_3:+60773912 | None:intergenic |
ATTTATTGTGGTAGCACTGG+TGG | 0.539802 | 5_3:-60773381 | Msa0822400:CDS |
AAACATGTTCCTTGTATCAT+GGG | 0.539896 | 5_3:-60774021 | Msa0822400:CDS |
TGGTTGATAATCCGCTATGT+TGG | 0.541576 | 5_3:-60773512 | Msa0822400:CDS |
AGAAGAAGGACCAACATTTG+TGG | 0.543509 | 5_3:-60773358 | Msa0822400:CDS |
TGAAGTCGTTGCTAATTCCA+TGG | 0.543846 | 5_3:-60774575 | Msa0822400:CDS |
GATTCAGGTTCAGGTGGTGG+AGG | 0.546175 | 5_3:+60773858 | None:intergenic |
ACAAACACTAATATTAATTG+AGG | 0.550824 | 5_3:+60773106 | None:intergenic |
AATAAGCCTATAATTACTAC+TGG | 0.553926 | 5_3:-60774673 | Msa0822400:CDS |
TTTGGAGGCGGCGGTGACAG+AGG | 0.555868 | 5_3:-60773466 | Msa0822400:CDS |
GCCCTAAAAGGAATGGTGAC+TGG | 0.557544 | 5_3:-60773218 | Msa0822400:CDS |
AGGAGGTAATCCCAAGAGAC+TGG | 0.562245 | 5_3:+60773126 | None:intergenic |
TGGTAGATTAACAAAAGAGC+TGG | 0.565630 | 5_3:-60773532 | Msa0822400:CDS |
AACATCCCACAATGCTATGG+TGG | 0.566613 | 5_3:+60774647 | None:intergenic |
CTTGGGTTTAATAGATTGGG+TGG | 0.568431 | 5_3:-60773436 | Msa0822400:CDS |
CGATTGTTGCAAAGTAACTC+AGG | 0.570367 | 5_3:+60774547 | None:intergenic |
TCTAAAGAAATGAGGAGCCT+GGG | 0.578551 | 5_3:+60773149 | None:intergenic |
CCTGAAGATACCACAAATGT+TGG | 0.579526 | 5_3:+60773348 | None:intergenic |
GATGGAAGGTGGGCGTCGTG+GGG | 0.580404 | 5_3:+60773923 | None:intergenic |
AGAAGTGACTGTCGAAAACA+AGG | 0.582200 | 5_3:+60773948 | None:intergenic |
GGAAGCCAATGCTCTTGCAT+TGG | 0.585364 | 5_3:+60774754 | None:intergenic |
ACAAAGGTTTCCAGAGTCGA+AGG | 0.585762 | 5_3:-60773325 | Msa0822400:CDS |
GGTGGAGGTAGATCAGAGAC+GGG | 0.587879 | 5_3:+60773873 | None:intergenic |
AGCAACGACTTCACCAGCAA+AGG | 0.588840 | 5_3:+60774585 | None:intergenic |
TAAAGTGAAGGATGGATGGA+AGG | 0.590822 | 5_3:+60773909 | None:intergenic |
TTGTGGTATCTTCAGGACAA+AGG | 0.593564 | 5_3:-60773341 | Msa0822400:CDS |
ACATGTCATAAAGTGAAGGA+TGG | 0.594714 | 5_3:+60773901 | None:intergenic |
ATGCCAAGCCCTAAAAGGAA+TGG | 0.595010 | 5_3:-60773225 | Msa0822400:CDS |
TGGTGGAGGTAGATCAGAGA+CGG | 0.600538 | 5_3:+60773872 | None:intergenic |
CTCTACATGCACCTTCCTAA+GGG | 0.601014 | 5_3:-60773192 | Msa0822400:CDS |
AGTGCAAGTGTCCCTTAGGA+AGG | 0.602305 | 5_3:+60773181 | None:intergenic |
AACACTAATATTAATTGAGG+AGG | 0.603374 | 5_3:+60773109 | None:intergenic |
TTGTGGTTGACGGAAGAAAG+AGG | 0.605169 | 5_3:-60773629 | Msa0822400:CDS |
GAGTTACTTTGCAACAATCG+TGG | 0.605999 | 5_3:-60774544 | Msa0822400:CDS |
GTCCAGTTCCTGGATTGGCA+AGG | 0.607030 | 5_3:-60773404 | Msa0822400:CDS |
TTGTTCTTGTGCAGACAACA+TGG | 0.607336 | 5_3:-60774109 | Msa0822400:intron |
AATGTGCTTTCGATTCCCTA+TGG | 0.610089 | 5_3:-60773555 | Msa0822400:CDS |
GAGACTGGTCTAAAGAAATG+AGG | 0.612013 | 5_3:+60773141 | None:intergenic |
AGAACACACCGACATCAACA+GGG | 0.612828 | 5_3:+60774704 | None:intergenic |
AAGTAACTCAGGTTCACCCA+TGG | 0.618644 | 5_3:+60774558 | None:intergenic |
GTGCTTTCGATTCCCTATGG+TGG | 0.619185 | 5_3:-60773552 | Msa0822400:CDS |
AAAATGGGGCTTGTGGTTGA+CGG | 0.619932 | 5_3:-60773639 | Msa0822400:CDS |
CTTGTTCCAAAGAAGAAACA+TGG | 0.620389 | 5_3:-60774439 | Msa0822400:CDS |
TGGCACCCACCATAGCATTG+TGG | 0.626128 | 5_3:-60774653 | Msa0822400:CDS |
ACATCCCACAATGCTATGGT+GGG | 0.631579 | 5_3:+60774648 | None:intergenic |
ACATACATGTCATAAAGTGA+AGG | 0.639724 | 5_3:+60773897 | None:intergenic |
ACTTTGCAACAATCGTGGAG+TGG | 0.644603 | 5_3:-60774539 | Msa0822400:CDS |
GAAGTCGTTGCTAATTCCAT+GGG | 0.644829 | 5_3:-60774574 | Msa0822400:CDS |
GAACACACCGACATCAACAG+GGG | 0.646980 | 5_3:+60774705 | None:intergenic |
GGATTGGCAAGGATTTATTG+TGG | 0.648587 | 5_3:-60773393 | Msa0822400:CDS |
GAGTCAGATTCAGGTTCAGG+TGG | 0.651262 | 5_3:+60773852 | None:intergenic |
AAATGATAAGATCCAAACAC+AGG | 0.657847 | 5_3:+60773282 | None:intergenic |
TGATAATCCGCTATGTTGGG+TGG | 0.663374 | 5_3:-60773508 | Msa0822400:CDS |
ACAACATGGATGAAATGTGG+TGG | 0.668180 | 5_3:-60774095 | Msa0822400:CDS |
AATAGGCATCCGCTATACGA+TGG | 0.674136 | 5_3:+60774048 | None:intergenic |
GAAATGTGGTGGATTAGTGG+TGG | 0.677628 | 5_3:-60774084 | Msa0822400:CDS |
AACACACCGACATCAACAGG+GGG | 0.687180 | 5_3:+60774706 | None:intergenic |
CAGACAACATGGATGAAATG+TGG | 0.692012 | 5_3:-60774098 | Msa0822400:CDS |
CTAGCCAACTCAAACAATGG+TGG | 0.694488 | 5_3:-60773756 | Msa0822400:CDS |
TAGCCAGCACTACCTCCCCA+AGG | 0.698597 | 5_3:+60773258 | None:intergenic |
GGGACACTTGCACTTCATGG+AGG | 0.714604 | 5_3:-60773172 | Msa0822400:CDS |
CGATCTGCCACCCAACATAG+CGG | 0.715687 | 5_3:+60773501 | None:intergenic |
GGAAGAAAGAGGCTAAGCAA+CGG | 0.723389 | 5_3:-60773618 | Msa0822400:CDS |
CAACGTGAATATGACCAACG+AGG | 0.763069 | 5_3:-60774797 | Msa0822400:CDS |
GTGGAGGTAGATCAGAGACG+GGG | 0.788848 | 5_3:+60773874 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAATAAAGGTTTGATAG+TGG | + | chr5_3:60773209-60773228 | None:intergenic | 20.0% |
!! | TTTGAAAAATTCTTTAGCTA+AGG | - | chr5_3:60773313-60773332 | Msa0822400:CDS | 20.0% |
!!! | AATTTTAATTTTGAACCACT+TGG | - | chr5_3:60773739-60773758 | Msa0822400:CDS | 20.0% |
!!! | CGATTATGAATTCATATTTT+GGG | - | chr5_3:60774361-60774380 | Msa0822400:intron | 20.0% |
!! | ATTAAATAAAGGTTTGATAG+TGG | + | chr5_3:60773209-60773228 | None:intergenic | 20.0% |
!! | TTTGAAAAATTCTTTAGCTA+AGG | - | chr5_3:60773313-60773332 | Msa0822400:CDS | 20.0% |
!!! | AATTTTAATTTTGAACCACT+TGG | - | chr5_3:60773739-60773758 | Msa0822400:CDS | 20.0% |
!!! | CGATTATGAATTCATATTTT+GGG | - | chr5_3:60774361-60774380 | Msa0822400:intron | 20.0% |
! | AATAAGCCTATAATTACTAC+TGG | - | chr5_3:60773266-60773285 | Msa0822400:CDS | 25.0% |
! | AGTAAAATGATAAGACCAAT+GGG | + | chr5_3:60773680-60773699 | None:intergenic | 25.0% |
! | TATAATCTATACCATATGCA+AGG | + | chr5_3:60773793-60773812 | None:intergenic | 25.0% |
!!! | ATCAAAGACTTGTTATCATT+GGG | + | chr5_3:60773958-60773977 | None:intergenic | 25.0% |
! | AGTATATGCGACTTATTATT+GGG | + | chr5_3:60774128-60774147 | None:intergenic | 25.0% |
! | TAGTATATGCGACTTATTAT+TGG | + | chr5_3:60774129-60774148 | None:intergenic | 25.0% |
! | TGAAAACATTGTTGCAAAAA+TGG | - | chr5_3:60774284-60774303 | Msa0822400:intron | 25.0% |
! | GAAAACATTGTTGCAAAAAT+GGG | - | chr5_3:60774285-60774304 | Msa0822400:intron | 25.0% |
! | AAAACATTGTTGCAAAAATG+GGG | - | chr5_3:60774286-60774305 | Msa0822400:intron | 25.0% |
!! | GCGATTATGAATTCATATTT+TGG | - | chr5_3:60774360-60774379 | Msa0822400:intron | 25.0% |
! | ATTTCTTGGGTTTAATAGAT+TGG | - | chr5_3:60774499-60774518 | Msa0822400:CDS | 25.0% |
! | TTTCTTGGGTTTAATAGATT+GGG | - | chr5_3:60774500-60774519 | Msa0822400:CDS | 25.0% |
! | AATAAGCCTATAATTACTAC+TGG | - | chr5_3:60773266-60773285 | Msa0822400:CDS | 25.0% |
! | AGTAAAATGATAAGACCAAT+GGG | + | chr5_3:60773680-60773699 | None:intergenic | 25.0% |
! | TATAATCTATACCATATGCA+AGG | + | chr5_3:60773793-60773812 | None:intergenic | 25.0% |
!!! | ATCAAAGACTTGTTATCATT+GGG | + | chr5_3:60773958-60773977 | None:intergenic | 25.0% |
! | AGTATATGCGACTTATTATT+GGG | + | chr5_3:60774128-60774147 | None:intergenic | 25.0% |
! | TAGTATATGCGACTTATTAT+TGG | + | chr5_3:60774129-60774148 | None:intergenic | 25.0% |
! | TGAAAACATTGTTGCAAAAA+TGG | - | chr5_3:60774284-60774303 | Msa0822400:intron | 25.0% |
! | GAAAACATTGTTGCAAAAAT+GGG | - | chr5_3:60774285-60774304 | Msa0822400:intron | 25.0% |
! | AAAACATTGTTGCAAAAATG+GGG | - | chr5_3:60774286-60774305 | Msa0822400:intron | 25.0% |
!! | GCGATTATGAATTCATATTT+TGG | - | chr5_3:60774360-60774379 | Msa0822400:intron | 25.0% |
! | ATTTCTTGGGTTTAATAGAT+TGG | - | chr5_3:60774499-60774518 | Msa0822400:CDS | 25.0% |
! | TTTCTTGGGTTTAATAGATT+GGG | - | chr5_3:60774500-60774519 | Msa0822400:CDS | 25.0% |
! | ACCAAAACATTTTGTTCTCA+AGG | - | chr5_3:60773561-60773580 | Msa0822400:CDS | 30.0% |
! | CCAAAACATTTTGTTCTCAA+GGG | - | chr5_3:60773562-60773581 | Msa0822400:CDS | 30.0% |
ATTAGTACTTGTGTTTAGAC+AGG | - | chr5_3:60773645-60773664 | Msa0822400:CDS | 30.0% | |
CAGTAAAATGATAAGACCAA+TGG | + | chr5_3:60773681-60773700 | None:intergenic | 30.0% | |
! | TTAATTTTGAACCACTTGGT+TGG | - | chr5_3:60773743-60773762 | Msa0822400:CDS | 30.0% |
AAACATGTTCCTTGTATCAT+GGG | - | chr5_3:60773918-60773937 | Msa0822400:CDS | 30.0% | |
!! | GATCAAAGACTTGTTATCAT+TGG | + | chr5_3:60773959-60773978 | None:intergenic | 30.0% |
ACATACATGTCATAAAGTGA+AGG | + | chr5_3:60774045-60774064 | None:intergenic | 30.0% | |
TTAATATCAGAGTCAGATTC+AGG | + | chr5_3:60774099-60774118 | None:intergenic | 30.0% | |
!! | GTTTTCATTATCGATTGAAG+CGG | + | chr5_3:60774271-60774290 | None:intergenic | 30.0% |
TTTGTTAATCTACCACCATA+GGG | + | chr5_3:60774402-60774421 | None:intergenic | 30.0% | |
! | TTTTGTTAATCTACCACCAT+AGG | + | chr5_3:60774403-60774422 | None:intergenic | 30.0% |
AAATGATAAGATCCAAACAC+AGG | + | chr5_3:60774660-60774679 | None:intergenic | 30.0% | |
! | TTGGATCTTATCATTTTCCT+TGG | - | chr5_3:60774664-60774683 | Msa0822400:CDS | 30.0% |
! | TGGATCTTATCATTTTCCTT+GGG | - | chr5_3:60774665-60774684 | Msa0822400:CDS | 30.0% |
! | ACCAAAACATTTTGTTCTCA+AGG | - | chr5_3:60773561-60773580 | Msa0822400:CDS | 30.0% |
! | CCAAAACATTTTGTTCTCAA+GGG | - | chr5_3:60773562-60773581 | Msa0822400:CDS | 30.0% |
ATTAGTACTTGTGTTTAGAC+AGG | - | chr5_3:60773645-60773664 | Msa0822400:CDS | 30.0% | |
CAGTAAAATGATAAGACCAA+TGG | + | chr5_3:60773681-60773700 | None:intergenic | 30.0% | |
! | TTAATTTTGAACCACTTGGT+TGG | - | chr5_3:60773743-60773762 | Msa0822400:CDS | 30.0% |
AAACATGTTCCTTGTATCAT+GGG | - | chr5_3:60773918-60773937 | Msa0822400:CDS | 30.0% | |
!! | GATCAAAGACTTGTTATCAT+TGG | + | chr5_3:60773959-60773978 | None:intergenic | 30.0% |
ACATACATGTCATAAAGTGA+AGG | + | chr5_3:60774045-60774064 | None:intergenic | 30.0% | |
TTAATATCAGAGTCAGATTC+AGG | + | chr5_3:60774099-60774118 | None:intergenic | 30.0% | |
!! | GTTTTCATTATCGATTGAAG+CGG | + | chr5_3:60774271-60774290 | None:intergenic | 30.0% |
TTTGTTAATCTACCACCATA+GGG | + | chr5_3:60774402-60774421 | None:intergenic | 30.0% | |
! | TTTTGTTAATCTACCACCAT+AGG | + | chr5_3:60774403-60774422 | None:intergenic | 30.0% |
AAATGATAAGATCCAAACAC+AGG | + | chr5_3:60774660-60774679 | None:intergenic | 30.0% | |
! | TTGGATCTTATCATTTTCCT+TGG | - | chr5_3:60774664-60774683 | Msa0822400:CDS | 30.0% |
! | TGGATCTTATCATTTTCCTT+GGG | - | chr5_3:60774665-60774684 | Msa0822400:CDS | 30.0% |
CAGGGGGAAGAATTAAATAA+AGG | + | chr5_3:60773220-60773239 | None:intergenic | 35.0% | |
GTTTCTTATTATGCCTTTGC+TGG | - | chr5_3:60773341-60773360 | Msa0822400:CDS | 35.0% | |
AATCCAGATGAAACTGTAGA+AGG | - | chr5_3:60773473-60773492 | Msa0822400:CDS | 35.0% | |
ATCCAGATGAAACTGTAGAA+GGG | - | chr5_3:60773474-60773493 | Msa0822400:CDS | 35.0% | |
CTTGTTCCAAAGAAGAAACA+TGG | - | chr5_3:60773500-60773519 | Msa0822400:CDS | 35.0% | |
! | CCCTTGAGAACAAAATGTTT+TGG | + | chr5_3:60773565-60773584 | None:intergenic | 35.0% |
TCTCAAGGGAATATTCGAAT+AGG | - | chr5_3:60773576-60773595 | Msa0822400:CDS | 35.0% | |
AATGATAAGACCAATGGGTA+CGG | + | chr5_3:60773675-60773694 | None:intergenic | 35.0% | |
!!! | TTGGTTTAGTGGTGTTGTTT+TGG | - | chr5_3:60773762-60773781 | Msa0822400:CDS | 35.0% |
!!! | TGGTTTAGTGGTGTTGTTTT+GGG | - | chr5_3:60773763-60773782 | Msa0822400:CDS | 35.0% |
AATCTATACCATATGCAAGG+TGG | + | chr5_3:60773790-60773809 | None:intergenic | 35.0% | |
AAGGAACATGTTTGCAGAAT+AGG | + | chr5_3:60773911-60773930 | None:intergenic | 35.0% | |
CAAACATGTTCCTTGTATCA+TGG | - | chr5_3:60773917-60773936 | Msa0822400:CDS | 35.0% | |
ACATGTCATAAAGTGAAGGA+TGG | + | chr5_3:60774041-60774060 | None:intergenic | 35.0% | |
TTTCCACAAGAAAGCAGAAA+AGG | + | chr5_3:60774235-60774254 | None:intergenic | 35.0% | |
TTCTGCTTTCTTGTGGAAAA+TGG | - | chr5_3:60774236-60774255 | Msa0822400:intron | 35.0% | |
TTTCTTGTGGAAAATGGTTG+CGG | - | chr5_3:60774242-60774261 | Msa0822400:intron | 35.0% | |
TGGTAGATTAACAAAAGAGC+TGG | - | chr5_3:60774407-60774426 | Msa0822400:intron | 35.0% | |
! | AGATCGAGTTCATGAGTTTT+TGG | - | chr5_3:60774455-60774474 | Msa0822400:CDS | 35.0% |
! | GGATCTTATCATTTTCCTTG+GGG | - | chr5_3:60774666-60774685 | Msa0822400:CDS | 35.0% |
ATTTCTTTAGACCAGTCTCT+TGG | - | chr5_3:60774802-60774821 | Msa0822400:CDS | 35.0% | |
TTTCTTTAGACCAGTCTCTT+GGG | - | chr5_3:60774803-60774822 | Msa0822400:CDS | 35.0% | |
CAGGGGGAAGAATTAAATAA+AGG | + | chr5_3:60773220-60773239 | None:intergenic | 35.0% | |
GTTTCTTATTATGCCTTTGC+TGG | - | chr5_3:60773341-60773360 | Msa0822400:CDS | 35.0% | |
AATCCAGATGAAACTGTAGA+AGG | - | chr5_3:60773473-60773492 | Msa0822400:CDS | 35.0% | |
ATCCAGATGAAACTGTAGAA+GGG | - | chr5_3:60773474-60773493 | Msa0822400:CDS | 35.0% | |
CTTGTTCCAAAGAAGAAACA+TGG | - | chr5_3:60773500-60773519 | Msa0822400:CDS | 35.0% | |
! | CCCTTGAGAACAAAATGTTT+TGG | + | chr5_3:60773565-60773584 | None:intergenic | 35.0% |
TCTCAAGGGAATATTCGAAT+AGG | - | chr5_3:60773576-60773595 | Msa0822400:CDS | 35.0% | |
AATGATAAGACCAATGGGTA+CGG | + | chr5_3:60773675-60773694 | None:intergenic | 35.0% | |
!!! | TTGGTTTAGTGGTGTTGTTT+TGG | - | chr5_3:60773762-60773781 | Msa0822400:CDS | 35.0% |
!!! | TGGTTTAGTGGTGTTGTTTT+GGG | - | chr5_3:60773763-60773782 | Msa0822400:CDS | 35.0% |
AATCTATACCATATGCAAGG+TGG | + | chr5_3:60773790-60773809 | None:intergenic | 35.0% | |
AAGGAACATGTTTGCAGAAT+AGG | + | chr5_3:60773911-60773930 | None:intergenic | 35.0% | |
CAAACATGTTCCTTGTATCA+TGG | - | chr5_3:60773917-60773936 | Msa0822400:CDS | 35.0% | |
ACATGTCATAAAGTGAAGGA+TGG | + | chr5_3:60774041-60774060 | None:intergenic | 35.0% | |
TTTCCACAAGAAAGCAGAAA+AGG | + | chr5_3:60774235-60774254 | None:intergenic | 35.0% | |
TTCTGCTTTCTTGTGGAAAA+TGG | - | chr5_3:60774236-60774255 | Msa0822400:intron | 35.0% | |
TTTCTTGTGGAAAATGGTTG+CGG | - | chr5_3:60774242-60774261 | Msa0822400:intron | 35.0% | |
TGGTAGATTAACAAAAGAGC+TGG | - | chr5_3:60774407-60774426 | Msa0822400:intron | 35.0% | |
! | AGATCGAGTTCATGAGTTTT+TGG | - | chr5_3:60774455-60774474 | Msa0822400:CDS | 35.0% |
! | GGATCTTATCATTTTCCTTG+GGG | - | chr5_3:60774666-60774685 | Msa0822400:CDS | 35.0% |
ATTTCTTTAGACCAGTCTCT+TGG | - | chr5_3:60774802-60774821 | Msa0822400:CDS | 35.0% | |
TTTCTTTAGACCAGTCTCTT+GGG | - | chr5_3:60774803-60774822 | Msa0822400:CDS | 35.0% | |
TATGACCAACGAGGAAATAG+TGG | - | chr5_3:60773151-60773170 | Msa0822400:CDS | 40.0% | |
TGGGTGCCAGTAGTAATTAT+AGG | + | chr5_3:60773275-60773294 | None:intergenic | 40.0% | |
TCAAACATCCCACAATGCTA+TGG | + | chr5_3:60773298-60773317 | None:intergenic | 40.0% | |
TGAAGTCGTTGCTAATTCCA+TGG | - | chr5_3:60773364-60773383 | Msa0822400:CDS | 40.0% | |
GAAGTCGTTGCTAATTCCAT+GGG | - | chr5_3:60773365-60773384 | Msa0822400:CDS | 40.0% | |
CGATTGTTGCAAAGTAACTC+AGG | + | chr5_3:60773395-60773414 | None:intergenic | 40.0% | |
! | GAGTTACTTTGCAACAATCG+TGG | - | chr5_3:60773395-60773414 | Msa0822400:CDS | 40.0% |
TTCCCTTCTACAGTTTCATC+TGG | + | chr5_3:60773479-60773498 | None:intergenic | 40.0% | |
AGCACACCATGTTTCTTCTT+TGG | + | chr5_3:60773509-60773528 | None:intergenic | 40.0% | |
TTGTTCTTGTGCAGACAACA+TGG | - | chr5_3:60773830-60773849 | Msa0822400:CDS | 40.0% | |
CAGACAACATGGATGAAATG+TGG | - | chr5_3:60773841-60773860 | Msa0822400:CDS | 40.0% | |
ACAACATGGATGAAATGTGG+TGG | - | chr5_3:60773844-60773863 | Msa0822400:CDS | 40.0% | |
!! | GATGAAATGTGGTGGATTAG+TGG | - | chr5_3:60773852-60773871 | Msa0822400:CDS | 40.0% |
! | CACTTTTGACCATCGTATAG+CGG | - | chr5_3:60773882-60773901 | Msa0822400:CDS | 40.0% |
GAAAACAAGGTTGCGTTGTT+GGG | + | chr5_3:60773981-60774000 | None:intergenic | 40.0% | |
AGAAGTGACTGTCGAAAACA+AGG | + | chr5_3:60773994-60774013 | None:intergenic | 40.0% | |
TAAAGTGAAGGATGGATGGA+AGG | + | chr5_3:60774033-60774052 | None:intergenic | 40.0% | |
GTCATAAAGTGAAGGATGGA+TGG | + | chr5_3:60774037-60774056 | None:intergenic | 40.0% | |
TCACTAGCCAACTCAAACAA+TGG | - | chr5_3:60774180-60774199 | Msa0822400:intron | 40.0% | |
ACTACCACCATTGTTTGAGT+TGG | + | chr5_3:60774190-60774209 | None:intergenic | 40.0% | |
! | AGTCCTTTTCTGCTTTCTTG+TGG | - | chr5_3:60774229-60774248 | Msa0822400:intron | 40.0% |
AATGTGCTTTCGATTCCCTA+TGG | - | chr5_3:60774384-60774403 | Msa0822400:intron | 40.0% | |
!! | TGGTTGATAATCCGCTATGT+TGG | - | chr5_3:60774427-60774446 | Msa0822400:CDS | 40.0% |
!! | GGTTGATAATCCGCTATGTT+GGG | - | chr5_3:60774428-60774447 | Msa0822400:CDS | 40.0% |
!! | TCGAGTTCATGAGTTTTTGG+AGG | - | chr5_3:60774458-60774477 | Msa0822400:CDS | 40.0% |
!! | AGTTCATGAGTTTTTGGAGG+CGG | - | chr5_3:60774461-60774480 | Msa0822400:CDS | 40.0% |
CTTGGGTTTAATAGATTGGG+TGG | - | chr5_3:60774503-60774522 | Msa0822400:CDS | 40.0% | |
CAATAAATCCTTGCCAATCC+AGG | + | chr5_3:60774546-60774565 | None:intergenic | 40.0% | |
! | GGATTGGCAAGGATTTATTG+TGG | - | chr5_3:60774546-60774565 | Msa0822400:CDS | 40.0% |
AGGATTTATTGTGGTAGCAC+TGG | - | chr5_3:60774555-60774574 | Msa0822400:CDS | 40.0% | |
! | ATTTATTGTGGTAGCACTGG+TGG | - | chr5_3:60774558-60774577 | Msa0822400:CDS | 40.0% |
AGAAGAAGGACCAACATTTG+TGG | - | chr5_3:60774581-60774600 | Msa0822400:CDS | 40.0% | |
CCTGAAGATACCACAAATGT+TGG | + | chr5_3:60774594-60774613 | None:intergenic | 40.0% | |
CCAACATTTGTGGTATCTTC+AGG | - | chr5_3:60774591-60774610 | Msa0822400:CDS | 40.0% | |
TTGTGGTATCTTCAGGACAA+AGG | - | chr5_3:60774598-60774617 | Msa0822400:CDS | 40.0% | |
!! | AGTCGAAGGTTGATTTTGGA+TGG | - | chr5_3:60774628-60774647 | Msa0822400:CDS | 40.0% |
!! | GTCGAAGGTTGATTTTGGAT+GGG | - | chr5_3:60774629-60774648 | Msa0822400:CDS | 40.0% |
!! | TCGAAGGTTGATTTTGGATG+GGG | - | chr5_3:60774630-60774649 | Msa0822400:CDS | 40.0% |
! | TCTTATCATTTTCCTTGGGG+AGG | - | chr5_3:60774669-60774688 | Msa0822400:CDS | 40.0% |
! | ACCAGTCACCATTCCTTTTA+GGG | + | chr5_3:60774725-60774744 | None:intergenic | 40.0% |
! | AACCAGTCACCATTCCTTTT+AGG | + | chr5_3:60774726-60774745 | None:intergenic | 40.0% |
TCTAAAGAAATGAGGAGCCT+GGG | + | chr5_3:60774793-60774812 | None:intergenic | 40.0% | |
!! | GAGACTGGTCTAAAGAAATG+AGG | + | chr5_3:60774801-60774820 | None:intergenic | 40.0% |
TATGACCAACGAGGAAATAG+TGG | - | chr5_3:60773151-60773170 | Msa0822400:CDS | 40.0% | |
TGGGTGCCAGTAGTAATTAT+AGG | + | chr5_3:60773275-60773294 | None:intergenic | 40.0% | |
TCAAACATCCCACAATGCTA+TGG | + | chr5_3:60773298-60773317 | None:intergenic | 40.0% | |
TGAAGTCGTTGCTAATTCCA+TGG | - | chr5_3:60773364-60773383 | Msa0822400:CDS | 40.0% | |
GAAGTCGTTGCTAATTCCAT+GGG | - | chr5_3:60773365-60773384 | Msa0822400:CDS | 40.0% | |
CGATTGTTGCAAAGTAACTC+AGG | + | chr5_3:60773395-60773414 | None:intergenic | 40.0% | |
! | GAGTTACTTTGCAACAATCG+TGG | - | chr5_3:60773395-60773414 | Msa0822400:CDS | 40.0% |
TTCCCTTCTACAGTTTCATC+TGG | + | chr5_3:60773479-60773498 | None:intergenic | 40.0% | |
AGCACACCATGTTTCTTCTT+TGG | + | chr5_3:60773509-60773528 | None:intergenic | 40.0% | |
TTGTTCTTGTGCAGACAACA+TGG | - | chr5_3:60773830-60773849 | Msa0822400:CDS | 40.0% | |
CAGACAACATGGATGAAATG+TGG | - | chr5_3:60773841-60773860 | Msa0822400:CDS | 40.0% | |
ACAACATGGATGAAATGTGG+TGG | - | chr5_3:60773844-60773863 | Msa0822400:CDS | 40.0% | |
!! | GATGAAATGTGGTGGATTAG+TGG | - | chr5_3:60773852-60773871 | Msa0822400:CDS | 40.0% |
! | CACTTTTGACCATCGTATAG+CGG | - | chr5_3:60773882-60773901 | Msa0822400:CDS | 40.0% |
GAAAACAAGGTTGCGTTGTT+GGG | + | chr5_3:60773981-60774000 | None:intergenic | 40.0% | |
AGAAGTGACTGTCGAAAACA+AGG | + | chr5_3:60773994-60774013 | None:intergenic | 40.0% | |
TAAAGTGAAGGATGGATGGA+AGG | + | chr5_3:60774033-60774052 | None:intergenic | 40.0% | |
GTCATAAAGTGAAGGATGGA+TGG | + | chr5_3:60774037-60774056 | None:intergenic | 40.0% | |
TCACTAGCCAACTCAAACAA+TGG | - | chr5_3:60774180-60774199 | Msa0822400:intron | 40.0% | |
ACTACCACCATTGTTTGAGT+TGG | + | chr5_3:60774190-60774209 | None:intergenic | 40.0% | |
! | AGTCCTTTTCTGCTTTCTTG+TGG | - | chr5_3:60774229-60774248 | Msa0822400:intron | 40.0% |
AATGTGCTTTCGATTCCCTA+TGG | - | chr5_3:60774384-60774403 | Msa0822400:intron | 40.0% | |
!! | TGGTTGATAATCCGCTATGT+TGG | - | chr5_3:60774427-60774446 | Msa0822400:CDS | 40.0% |
!! | GGTTGATAATCCGCTATGTT+GGG | - | chr5_3:60774428-60774447 | Msa0822400:CDS | 40.0% |
!! | TCGAGTTCATGAGTTTTTGG+AGG | - | chr5_3:60774458-60774477 | Msa0822400:CDS | 40.0% |
!! | AGTTCATGAGTTTTTGGAGG+CGG | - | chr5_3:60774461-60774480 | Msa0822400:CDS | 40.0% |
CTTGGGTTTAATAGATTGGG+TGG | - | chr5_3:60774503-60774522 | Msa0822400:CDS | 40.0% | |
CAATAAATCCTTGCCAATCC+AGG | + | chr5_3:60774546-60774565 | None:intergenic | 40.0% | |
! | GGATTGGCAAGGATTTATTG+TGG | - | chr5_3:60774546-60774565 | Msa0822400:CDS | 40.0% |
AGGATTTATTGTGGTAGCAC+TGG | - | chr5_3:60774555-60774574 | Msa0822400:CDS | 40.0% | |
! | ATTTATTGTGGTAGCACTGG+TGG | - | chr5_3:60774558-60774577 | Msa0822400:CDS | 40.0% |
AGAAGAAGGACCAACATTTG+TGG | - | chr5_3:60774581-60774600 | Msa0822400:CDS | 40.0% | |
CCTGAAGATACCACAAATGT+TGG | + | chr5_3:60774594-60774613 | None:intergenic | 40.0% | |
CCAACATTTGTGGTATCTTC+AGG | - | chr5_3:60774591-60774610 | Msa0822400:CDS | 40.0% | |
TTGTGGTATCTTCAGGACAA+AGG | - | chr5_3:60774598-60774617 | Msa0822400:CDS | 40.0% | |
!! | AGTCGAAGGTTGATTTTGGA+TGG | - | chr5_3:60774628-60774647 | Msa0822400:CDS | 40.0% |
!! | GTCGAAGGTTGATTTTGGAT+GGG | - | chr5_3:60774629-60774648 | Msa0822400:CDS | 40.0% |
!! | TCGAAGGTTGATTTTGGATG+GGG | - | chr5_3:60774630-60774649 | Msa0822400:CDS | 40.0% |
! | TCTTATCATTTTCCTTGGGG+AGG | - | chr5_3:60774669-60774688 | Msa0822400:CDS | 40.0% |
! | ACCAGTCACCATTCCTTTTA+GGG | + | chr5_3:60774725-60774744 | None:intergenic | 40.0% |
! | AACCAGTCACCATTCCTTTT+AGG | + | chr5_3:60774726-60774745 | None:intergenic | 40.0% |
TCTAAAGAAATGAGGAGCCT+GGG | + | chr5_3:60774793-60774812 | None:intergenic | 40.0% | |
!! | GAGACTGGTCTAAAGAAATG+AGG | + | chr5_3:60774801-60774820 | None:intergenic | 40.0% |
CAACGTGAATATGACCAACG+AGG | - | chr5_3:60773142-60773161 | Msa0822400:CDS | 45.0% | |
ATTCTTCCCCCTGTTGATGT+CGG | - | chr5_3:60773227-60773246 | Msa0822400:CDS | 45.0% | |
AGAACACACCGACATCAACA+GGG | + | chr5_3:60773238-60773257 | None:intergenic | 45.0% | |
AAGAACACACCGACATCAAC+AGG | + | chr5_3:60773239-60773258 | None:intergenic | 45.0% | |
ACATCCCACAATGCTATGGT+GGG | + | chr5_3:60773294-60773313 | None:intergenic | 45.0% | |
AACATCCCACAATGCTATGG+TGG | + | chr5_3:60773295-60773314 | None:intergenic | 45.0% | |
AAGTAACTCAGGTTCACCCA+TGG | + | chr5_3:60773384-60773403 | None:intergenic | 45.0% | |
ACTTTGCAACAATCGTGGAG+TGG | - | chr5_3:60773400-60773419 | Msa0822400:CDS | 45.0% | |
!! | GAACCACTTGGTTGGTTTAG+TGG | - | chr5_3:60773751-60773770 | Msa0822400:CDS | 45.0% |
ACACCACTAAACCAACCAAG+TGG | + | chr5_3:60773757-60773776 | None:intergenic | 45.0% | |
!!! | TTTTGGGACCACCTTGCATA+TGG | - | chr5_3:60773779-60773798 | Msa0822400:CDS | 45.0% |
!! | GAAATGTGGTGGATTAGTGG+TGG | - | chr5_3:60773855-60773874 | Msa0822400:CDS | 45.0% |
AATAGGCATCCGCTATACGA+TGG | + | chr5_3:60773894-60773913 | None:intergenic | 45.0% | |
ATCATTGGGCTGAGCCATTT+CGG | + | chr5_3:60773944-60773963 | None:intergenic | 45.0% | |
CGAAAACAAGGTTGCGTTGT+TGG | + | chr5_3:60773982-60774001 | None:intergenic | 45.0% | |
! | TCAGAGTCAGATTCAGGTTC+AGG | + | chr5_3:60774093-60774112 | None:intergenic | 45.0% |
CTAGCCAACTCAAACAATGG+TGG | - | chr5_3:60774183-60774202 | Msa0822400:intron | 45.0% | |
TGTTGCAAAAATGGGGCTTG+TGG | - | chr5_3:60774293-60774312 | Msa0822400:intron | 45.0% | |
AAAATGGGGCTTGTGGTTGA+CGG | - | chr5_3:60774300-60774319 | Msa0822400:intron | 45.0% | |
TTGTGGTTGACGGAAGAAAG+AGG | - | chr5_3:60774310-60774329 | Msa0822400:intron | 45.0% | |
GGAAGAAAGAGGCTAAGCAA+CGG | - | chr5_3:60774321-60774340 | Msa0822400:intron | 45.0% | |
TGATAATCCGCTATGTTGGG+TGG | - | chr5_3:60774431-60774450 | Msa0822400:CDS | 45.0% | |
!! | GTGACAGAGGAGCATTTCTT+GGG | - | chr5_3:60774486-60774505 | Msa0822400:CDS | 45.0% |
ACAAAGGTTTCCAGAGTCGA+AGG | - | chr5_3:60774614-60774633 | Msa0822400:CDS | 45.0% | |
CCAAAATCAACCTTCGACTC+TGG | + | chr5_3:60774627-60774646 | None:intergenic | 45.0% | |
!! | CCAGAGTCGAAGGTTGATTT+TGG | - | chr5_3:60774624-60774643 | Msa0822400:CDS | 45.0% |
!! | CGAAGGTTGATTTTGGATGG+GGG | - | chr5_3:60774631-60774650 | Msa0822400:CDS | 45.0% |
!!! | TTCCTTTTAGGGCTTGGCAT+TGG | + | chr5_3:60774714-60774733 | None:intergenic | 45.0% |
ATGCCAAGCCCTAAAAGGAA+TGG | - | chr5_3:60774714-60774733 | Msa0822400:CDS | 45.0% | |
!!! | TCACCATTCCTTTTAGGGCT+TGG | + | chr5_3:60774720-60774739 | None:intergenic | 45.0% |
CTCTACATGCACCTTCCTAA+GGG | - | chr5_3:60774747-60774766 | Msa0822400:CDS | 45.0% | |
ATGAAGTGCAAGTGTCCCTT+AGG | + | chr5_3:60774765-60774784 | None:intergenic | 45.0% | |
TAAGGGACACTTGCACTTCA+TGG | - | chr5_3:60774764-60774783 | Msa0822400:CDS | 45.0% | |
GTCTAAAGAAATGAGGAGCC+TGG | + | chr5_3:60774794-60774813 | None:intergenic | 45.0% | |
CAACGTGAATATGACCAACG+AGG | - | chr5_3:60773142-60773161 | Msa0822400:CDS | 45.0% | |
ATTCTTCCCCCTGTTGATGT+CGG | - | chr5_3:60773227-60773246 | Msa0822400:CDS | 45.0% | |
AGAACACACCGACATCAACA+GGG | + | chr5_3:60773238-60773257 | None:intergenic | 45.0% | |
AAGAACACACCGACATCAAC+AGG | + | chr5_3:60773239-60773258 | None:intergenic | 45.0% | |
ACATCCCACAATGCTATGGT+GGG | + | chr5_3:60773294-60773313 | None:intergenic | 45.0% | |
AACATCCCACAATGCTATGG+TGG | + | chr5_3:60773295-60773314 | None:intergenic | 45.0% | |
AAGTAACTCAGGTTCACCCA+TGG | + | chr5_3:60773384-60773403 | None:intergenic | 45.0% | |
ACTTTGCAACAATCGTGGAG+TGG | - | chr5_3:60773400-60773419 | Msa0822400:CDS | 45.0% | |
!! | GAACCACTTGGTTGGTTTAG+TGG | - | chr5_3:60773751-60773770 | Msa0822400:CDS | 45.0% |
ACACCACTAAACCAACCAAG+TGG | + | chr5_3:60773757-60773776 | None:intergenic | 45.0% | |
!!! | TTTTGGGACCACCTTGCATA+TGG | - | chr5_3:60773779-60773798 | Msa0822400:CDS | 45.0% |
!! | GAAATGTGGTGGATTAGTGG+TGG | - | chr5_3:60773855-60773874 | Msa0822400:CDS | 45.0% |
AATAGGCATCCGCTATACGA+TGG | + | chr5_3:60773894-60773913 | None:intergenic | 45.0% | |
ATCATTGGGCTGAGCCATTT+CGG | + | chr5_3:60773944-60773963 | None:intergenic | 45.0% | |
CGAAAACAAGGTTGCGTTGT+TGG | + | chr5_3:60773982-60774001 | None:intergenic | 45.0% | |
! | TCAGAGTCAGATTCAGGTTC+AGG | + | chr5_3:60774093-60774112 | None:intergenic | 45.0% |
CTAGCCAACTCAAACAATGG+TGG | - | chr5_3:60774183-60774202 | Msa0822400:intron | 45.0% | |
TGTTGCAAAAATGGGGCTTG+TGG | - | chr5_3:60774293-60774312 | Msa0822400:intron | 45.0% | |
AAAATGGGGCTTGTGGTTGA+CGG | - | chr5_3:60774300-60774319 | Msa0822400:intron | 45.0% | |
TTGTGGTTGACGGAAGAAAG+AGG | - | chr5_3:60774310-60774329 | Msa0822400:intron | 45.0% | |
GGAAGAAAGAGGCTAAGCAA+CGG | - | chr5_3:60774321-60774340 | Msa0822400:intron | 45.0% | |
TGATAATCCGCTATGTTGGG+TGG | - | chr5_3:60774431-60774450 | Msa0822400:CDS | 45.0% | |
!! | GTGACAGAGGAGCATTTCTT+GGG | - | chr5_3:60774486-60774505 | Msa0822400:CDS | 45.0% |
ACAAAGGTTTCCAGAGTCGA+AGG | - | chr5_3:60774614-60774633 | Msa0822400:CDS | 45.0% | |
CCAAAATCAACCTTCGACTC+TGG | + | chr5_3:60774627-60774646 | None:intergenic | 45.0% | |
!! | CCAGAGTCGAAGGTTGATTT+TGG | - | chr5_3:60774624-60774643 | Msa0822400:CDS | 45.0% |
!! | CGAAGGTTGATTTTGGATGG+GGG | - | chr5_3:60774631-60774650 | Msa0822400:CDS | 45.0% |
!!! | TTCCTTTTAGGGCTTGGCAT+TGG | + | chr5_3:60774714-60774733 | None:intergenic | 45.0% |
ATGCCAAGCCCTAAAAGGAA+TGG | - | chr5_3:60774714-60774733 | Msa0822400:CDS | 45.0% | |
!!! | TCACCATTCCTTTTAGGGCT+TGG | + | chr5_3:60774720-60774739 | None:intergenic | 45.0% |
CTCTACATGCACCTTCCTAA+GGG | - | chr5_3:60774747-60774766 | Msa0822400:CDS | 45.0% | |
ATGAAGTGCAAGTGTCCCTT+AGG | + | chr5_3:60774765-60774784 | None:intergenic | 45.0% | |
TAAGGGACACTTGCACTTCA+TGG | - | chr5_3:60774764-60774783 | Msa0822400:CDS | 45.0% | |
GTCTAAAGAAATGAGGAGCC+TGG | + | chr5_3:60774794-60774813 | None:intergenic | 45.0% | |
AGCTGCCACTATTTCCTCGT+TGG | + | chr5_3:60773159-60773178 | None:intergenic | 50.0% | |
! | CGCTACCAATGCAAGAGCAT+TGG | - | chr5_3:60773180-60773199 | Msa0822400:CDS | 50.0% |
GGAAGCCAATGCTCTTGCAT+TGG | + | chr5_3:60773188-60773207 | None:intergenic | 50.0% | |
AACACACCGACATCAACAGG+GGG | + | chr5_3:60773236-60773255 | None:intergenic | 50.0% | |
GAACACACCGACATCAACAG+GGG | + | chr5_3:60773237-60773256 | None:intergenic | 50.0% | |
AGCAACGACTTCACCAGCAA+AGG | + | chr5_3:60773357-60773376 | None:intergenic | 50.0% | |
!! | ACATGGTGTGCTTGCTGTTC+AGG | - | chr5_3:60773517-60773536 | Msa0822400:CDS | 50.0% |
CCATTTCGGCCCATGATACA+AGG | + | chr5_3:60773930-60773949 | None:intergenic | 50.0% | |
CCTTGTATCATGGGCCGAAA+TGG | - | chr5_3:60773927-60773946 | Msa0822400:CDS | 50.0% | |
GTGAAGGATGGATGGAAGGT+GGG | + | chr5_3:60774029-60774048 | None:intergenic | 50.0% | |
AGTGAAGGATGGATGGAAGG+TGG | + | chr5_3:60774030-60774049 | None:intergenic | 50.0% | |
TGGTGGAGGTAGATCAGAGA+CGG | + | chr5_3:60774070-60774089 | None:intergenic | 50.0% | |
! | TCAGATTCAGGTTCAGGTGG+TGG | + | chr5_3:60774087-60774106 | None:intergenic | 50.0% |
! | GAGTCAGATTCAGGTTCAGG+TGG | + | chr5_3:60774090-60774109 | None:intergenic | 50.0% |
GTGCTTTCGATTCCCTATGG+TGG | - | chr5_3:60774387-60774406 | Msa0822400:intron | 50.0% | |
!! | TCATGAGTTTTTGGAGGCGG+CGG | - | chr5_3:60774464-60774483 | Msa0822400:CDS | 50.0% |
!! | GGTGACAGAGGAGCATTTCT+TGG | - | chr5_3:60774485-60774504 | Msa0822400:CDS | 50.0% |
ATCCTTGCCAATCCAGGAAC+TGG | + | chr5_3:60774540-60774559 | None:intergenic | 50.0% | |
TGCCAATGCCAAGCCCTAAA+AGG | - | chr5_3:60774709-60774728 | Msa0822400:CDS | 50.0% | |
GCCCTAAAAGGAATGGTGAC+TGG | - | chr5_3:60774721-60774740 | Msa0822400:CDS | 50.0% | |
GCTCTACATGCACCTTCCTA+AGG | - | chr5_3:60774746-60774765 | Msa0822400:CDS | 50.0% | |
AGTGCAAGTGTCCCTTAGGA+AGG | + | chr5_3:60774761-60774780 | None:intergenic | 50.0% | |
AGGAGGTAATCCCAAGAGAC+TGG | + | chr5_3:60774816-60774835 | None:intergenic | 50.0% | |
AGCTGCCACTATTTCCTCGT+TGG | + | chr5_3:60773159-60773178 | None:intergenic | 50.0% | |
! | CGCTACCAATGCAAGAGCAT+TGG | - | chr5_3:60773180-60773199 | Msa0822400:CDS | 50.0% |
GGAAGCCAATGCTCTTGCAT+TGG | + | chr5_3:60773188-60773207 | None:intergenic | 50.0% | |
AACACACCGACATCAACAGG+GGG | + | chr5_3:60773236-60773255 | None:intergenic | 50.0% | |
GAACACACCGACATCAACAG+GGG | + | chr5_3:60773237-60773256 | None:intergenic | 50.0% | |
AGCAACGACTTCACCAGCAA+AGG | + | chr5_3:60773357-60773376 | None:intergenic | 50.0% | |
!! | ACATGGTGTGCTTGCTGTTC+AGG | - | chr5_3:60773517-60773536 | Msa0822400:CDS | 50.0% |
CCATTTCGGCCCATGATACA+AGG | + | chr5_3:60773930-60773949 | None:intergenic | 50.0% | |
CCTTGTATCATGGGCCGAAA+TGG | - | chr5_3:60773927-60773946 | Msa0822400:CDS | 50.0% | |
GTGAAGGATGGATGGAAGGT+GGG | + | chr5_3:60774029-60774048 | None:intergenic | 50.0% | |
AGTGAAGGATGGATGGAAGG+TGG | + | chr5_3:60774030-60774049 | None:intergenic | 50.0% | |
TGGTGGAGGTAGATCAGAGA+CGG | + | chr5_3:60774070-60774089 | None:intergenic | 50.0% | |
! | TCAGATTCAGGTTCAGGTGG+TGG | + | chr5_3:60774087-60774106 | None:intergenic | 50.0% |
! | GAGTCAGATTCAGGTTCAGG+TGG | + | chr5_3:60774090-60774109 | None:intergenic | 50.0% |
GTGCTTTCGATTCCCTATGG+TGG | - | chr5_3:60774387-60774406 | Msa0822400:intron | 50.0% | |
!! | TCATGAGTTTTTGGAGGCGG+CGG | - | chr5_3:60774464-60774483 | Msa0822400:CDS | 50.0% |
!! | GGTGACAGAGGAGCATTTCT+TGG | - | chr5_3:60774485-60774504 | Msa0822400:CDS | 50.0% |
ATCCTTGCCAATCCAGGAAC+TGG | + | chr5_3:60774540-60774559 | None:intergenic | 50.0% | |
TGCCAATGCCAAGCCCTAAA+AGG | - | chr5_3:60774709-60774728 | Msa0822400:CDS | 50.0% | |
GCCCTAAAAGGAATGGTGAC+TGG | - | chr5_3:60774721-60774740 | Msa0822400:CDS | 50.0% | |
GCTCTACATGCACCTTCCTA+AGG | - | chr5_3:60774746-60774765 | Msa0822400:CDS | 50.0% | |
AGTGCAAGTGTCCCTTAGGA+AGG | + | chr5_3:60774761-60774780 | None:intergenic | 50.0% | |
AGGAGGTAATCCCAAGAGAC+TGG | + | chr5_3:60774816-60774835 | None:intergenic | 50.0% | |
TGGCACCCACCATAGCATTG+TGG | - | chr5_3:60773286-60773305 | Msa0822400:CDS | 55.0% | |
GGCACCCACCATAGCATTGT+GGG | - | chr5_3:60773287-60773306 | Msa0822400:CDS | 55.0% | |
GTGGAGGTAGATCAGAGACG+GGG | + | chr5_3:60774068-60774087 | None:intergenic | 55.0% | |
GGTGGAGGTAGATCAGAGAC+GGG | + | chr5_3:60774069-60774088 | None:intergenic | 55.0% | |
! | GATTCAGGTTCAGGTGGTGG+AGG | + | chr5_3:60774084-60774103 | None:intergenic | 55.0% |
!!! | GGACTCGAGTTTTGAGCGCT+TGG | + | chr5_3:60774214-60774233 | None:intergenic | 55.0% |
CGATCTGCCACCCAACATAG+CGG | + | chr5_3:60774441-60774460 | None:intergenic | 55.0% | |
!! | GAAGAGCATCGTCCAGTTCC+TGG | - | chr5_3:60774525-60774544 | Msa0822400:CDS | 55.0% |
GCATCGTCCAGTTCCTGGAT+TGG | - | chr5_3:60774530-60774549 | Msa0822400:CDS | 55.0% | |
!! | GTCCAGTTCCTGGATTGGCA+AGG | - | chr5_3:60774535-60774554 | Msa0822400:CDS | 55.0% |
!! | GGTAGCACTGGTGGAGAAGA+AGG | - | chr5_3:60774567-60774586 | Msa0822400:CDS | 55.0% |
TTTCCTTGGGGAGGTAGTGC+TGG | - | chr5_3:60774678-60774697 | Msa0822400:CDS | 55.0% | |
GGGACACTTGCACTTCATGG+AGG | - | chr5_3:60774767-60774786 | Msa0822400:CDS | 55.0% | |
TGGCACCCACCATAGCATTG+TGG | - | chr5_3:60773286-60773305 | Msa0822400:CDS | 55.0% | |
GGCACCCACCATAGCATTGT+GGG | - | chr5_3:60773287-60773306 | Msa0822400:CDS | 55.0% | |
GTGGAGGTAGATCAGAGACG+GGG | + | chr5_3:60774068-60774087 | None:intergenic | 55.0% | |
GGTGGAGGTAGATCAGAGAC+GGG | + | chr5_3:60774069-60774088 | None:intergenic | 55.0% | |
! | GATTCAGGTTCAGGTGGTGG+AGG | + | chr5_3:60774084-60774103 | None:intergenic | 55.0% |
!!! | GGACTCGAGTTTTGAGCGCT+TGG | + | chr5_3:60774214-60774233 | None:intergenic | 55.0% |
CGATCTGCCACCCAACATAG+CGG | + | chr5_3:60774441-60774460 | None:intergenic | 55.0% | |
!! | GAAGAGCATCGTCCAGTTCC+TGG | - | chr5_3:60774525-60774544 | Msa0822400:CDS | 55.0% |
GCATCGTCCAGTTCCTGGAT+TGG | - | chr5_3:60774530-60774549 | Msa0822400:CDS | 55.0% | |
!! | GTCCAGTTCCTGGATTGGCA+AGG | - | chr5_3:60774535-60774554 | Msa0822400:CDS | 55.0% |
!! | GGTAGCACTGGTGGAGAAGA+AGG | - | chr5_3:60774567-60774586 | Msa0822400:CDS | 55.0% |
TTTCCTTGGGGAGGTAGTGC+TGG | - | chr5_3:60774678-60774697 | Msa0822400:CDS | 55.0% | |
GGGACACTTGCACTTCATGG+AGG | - | chr5_3:60774767-60774786 | Msa0822400:CDS | 55.0% | |
GACAGGCACTCCGTACCCAT+TGG | - | chr5_3:60773662-60773681 | Msa0822400:CDS | 60.0% | |
GGATGGGGGAAGCCTGTGTT+TGG | - | chr5_3:60774645-60774664 | Msa0822400:CDS | 60.0% | |
TAGCCAGCACTACCTCCCCA+AGG | + | chr5_3:60774684-60774703 | None:intergenic | 60.0% | |
CTTGCACTTCATGGAGGCCC+AGG | - | chr5_3:60774773-60774792 | Msa0822400:CDS | 60.0% | |
GACAGGCACTCCGTACCCAT+TGG | - | chr5_3:60773662-60773681 | Msa0822400:CDS | 60.0% | |
GGATGGGGGAAGCCTGTGTT+TGG | - | chr5_3:60774645-60774664 | Msa0822400:CDS | 60.0% | |
TAGCCAGCACTACCTCCCCA+AGG | + | chr5_3:60774684-60774703 | None:intergenic | 60.0% | |
CTTGCACTTCATGGAGGCCC+AGG | - | chr5_3:60774773-60774792 | Msa0822400:CDS | 60.0% | |
! | GATGGAAGGTGGGCGTCGTG+GGG | + | chr5_3:60774019-60774038 | None:intergenic | 65.0% |
! | GGATGGAAGGTGGGCGTCGT+GGG | + | chr5_3:60774020-60774039 | None:intergenic | 65.0% |
! | TGGATGGAAGGTGGGCGTCG+TGG | + | chr5_3:60774021-60774040 | None:intergenic | 65.0% |
TTTGGAGGCGGCGGTGACAG+AGG | - | chr5_3:60774473-60774492 | Msa0822400:CDS | 65.0% | |
! | GATGGAAGGTGGGCGTCGTG+GGG | + | chr5_3:60774019-60774038 | None:intergenic | 65.0% |
! | GGATGGAAGGTGGGCGTCGT+GGG | + | chr5_3:60774020-60774039 | None:intergenic | 65.0% |
! | TGGATGGAAGGTGGGCGTCG+TGG | + | chr5_3:60774021-60774040 | None:intergenic | 65.0% |
TTTGGAGGCGGCGGTGACAG+AGG | - | chr5_3:60774473-60774492 | Msa0822400:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 60773119 | 60774842 | 60773119 | ID=Msa0822400;Name=Msa0822400 |
chr5_3 | mRNA | 60773119 | 60774842 | 60773119 | ID=Msa0822400-mRNA-1;Parent=Msa0822400;Name=Msa0822400-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|472 |
chr5_3 | exon | 60774423 | 60774842 | 60774423 | ID=Msa0822400-mRNA-1:exon:18667;Parent=Msa0822400-mRNA-1 |
chr5_3 | exon | 60773119 | 60774117 | 60773119 | ID=Msa0822400-mRNA-1:exon:18666;Parent=Msa0822400-mRNA-1 |
chr5_3 | CDS | 60774423 | 60774842 | 60774423 | ID=Msa0822400-mRNA-1:cds;Parent=Msa0822400-mRNA-1 |
chr5_3 | CDS | 60773119 | 60774117 | 60773119 | ID=Msa0822400-mRNA-1:cds;Parent=Msa0822400-mRNA-1 |
Gene Sequence |
Protein sequence |