AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0138500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138500 MtrunA17_Chr1g0205891 98.799 1082 13 0 5 1086 2 1083 0.0 2208
Msa0138500 MtrunA17_Chr5g0394201 79.031 1073 207 7 13 1082 3 1060 0.0 1697
Msa0138500 MtrunA17_Chr4g0066651 43.899 754 374 13 176 902 790 1521 0.0 613
Msa0138500 MtrunA17_Chr4g0066741 47.249 527 257 9 366 886 176 687 1.69e-161 506
Msa0138500 MtrunA17_Chr7g0248031 42.446 695 321 14 355 988 970 1646 4.68e-154 506
Msa0138500 MtrunA17_Chr2g0286291 46.869 527 259 9 366 886 179 690 6.35e-152 480
Msa0138500 MtrunA17_Chr8g0348721 38.798 799 378 18 225 941 821 1590 2.22e-149 493
Msa0138500 MtrunA17_Chr5g0403921 44.196 491 256 10 373 848 178 665 6.45e-130 413
Msa0138500 MtrunA17_Chr3g0095091 46.436 491 235 7 366 839 558 1037 7.81e-128 428
Msa0138500 MtrunA17_Chr5g0442141 44.524 557 260 12 366 901 604 1132 1.15e-127 427
Msa0138500 MtrunA17_Chr3g0137091 41.156 571 279 13 345 885 263 806 7.72e-115 387
Msa0138500 MtrunA17_Chr7g0232121 40.568 493 252 10 379 837 39 524 1.23e-106 354
Msa0138500 MtrunA17_Chr4g0052341 41.794 524 258 15 369 870 735 1233 1.15e-103 359
Msa0138500 MtrunA17_Chr1g0163011 37.269 542 244 14 379 840 195 720 4.40e-86 294
Msa0138500 MtrunA17_Chr1g0175191 44.805 308 162 4 368 673 511 812 1.23e-73 268
Msa0138500 MtrunA17_Chr1g0175191 54.430 158 71 1 688 845 1061 1217 6.66e-49 190
Msa0138500 MtrunA17_Chr1g0183681 32.333 600 322 20 305 839 304 884 7.67e-73 264
Msa0138500 MtrunA17_Chr4g0017211 33.013 521 285 14 379 840 1450 1965 3.49e-72 264
Msa0138500 MtrunA17_Chr7g0257101 40.514 311 169 5 374 671 573 880 6.27e-69 253
Msa0138500 MtrunA17_Chr7g0257101 51.572 159 76 1 683 841 1186 1343 8.65e-41 164
Msa0138500 MtrunA17_Chr5g0393461 33.464 511 284 14 379 839 184 688 1.31e-68 248
Msa0138500 MtrunA17_Chr8g0384531 31.329 632 316 23 291 847 300 888 2.61e-67 246
Msa0138500 MtrunA17_Chr7g0231521 48.969 194 87 2 656 837 252 445 2.16e-47 182
Msa0138500 MtrunA17_Chr7g0231521 37.313 201 116 1 379 569 39 239 2.59e-41 164
Msa0138500 MtrunA17_Chr4g0069451 26.572 493 308 16 358 831 154 611 6.58e-31 130
Msa0138500 MtrunA17_Chr4g0040301 40.196 204 95 5 671 856 370 564 2.05e-30 129
Msa0138500 MtrunA17_Chr4g0040301 31.429 245 148 8 407 636 18 257 2.67e-23 106
Msa0138500 MtrunA17_Chr2g0296421 25.720 486 314 17 375 821 507 984 2.33e-27 120
Msa0138500 MtrunA17_Chr7g0232971 28.075 374 209 15 504 840 904 1254 1.18e-25 115
Msa0138500 MtrunA17_Chr1g0168031 28.659 328 169 12 400 679 535 845 1.62e-25 114
Msa0138500 MtrunA17_Chr1g0168031 37.324 142 86 2 692 831 990 1130 5.73e-18 90.1
Msa0138500 MtrunA17_Chr8g0352361 24.544 493 312 18 375 821 357 835 2.42e-24 110
Msa0138500 MtrunA17_Chr1g0190381 37.705 183 101 3 688 857 187 369 1.28e-23 106
Msa0138500 MtrunA17_Chr7g0233021 26.316 342 213 10 504 820 841 1168 2.39e-22 104
Msa0138500 MtrunA17_Chr7g0264371 26.620 432 260 15 427 834 327 725 7.43e-22 102
Msa0138500 MtrunA17_Chr2g0320751 26.000 350 169 10 400 676 399 731 1.19e-21 101
Msa0138500 MtrunA17_Chr2g0320751 35.294 136 85 2 698 831 859 993 2.55e-19 94.4
Msa0138500 MtrunA17_Chr7g0224051 23.791 517 277 13 396 821 565 1055 1.89e-21 101
Msa0138500 MtrunA17_Chr7g0232991 27.027 333 223 7 504 822 272 598 4.03e-21 99.4
Msa0138500 MtrunA17_Chr7g0225791 24.000 500 273 16 401 821 752 1223 9.16e-21 99.4
Msa0138500 MtrunA17_Chr7g0255821 37.662 154 92 3 680 830 640 792 4.39e-20 96.7
Msa0138500 MtrunA17_Chr7g0255821 24.599 374 214 11 315 636 136 493 2.17e-14 78.2
Msa0138500 MtrunA17_Chr5g0437621 24.815 540 315 17 401 857 754 1285 1.00e-19 95.9
Msa0138500 MtrunA17_Chr1g0149871 39.655 116 60 2 344 459 217 322 6.61e-19 89.4
Msa0138500 MtrunA17_Chr7g0233031 25.287 348 202 9 504 820 861 1181 2.48e-18 91.3
Msa0138500 MtrunA17_Chr7g0233001 25.862 348 211 10 504 821 128 458 3.88e-18 89.4
Msa0138500 MtrunA17_Chr4g0039561 45.263 95 49 1 653 744 47 141 8.03e-18 83.2
Msa0138500 MtrunA17_Chr4g0024921 36.154 130 80 2 702 830 779 906 1.24e-17 88.6
Msa0138500 MtrunA17_Chr3g0114161 23.593 551 321 17 395 857 691 1229 2.15e-17 88.2
Msa0138500 MtrunA17_Chr1g0212331 35.484 155 96 2 707 858 887 1040 2.35e-17 87.8
Msa0138500 MtrunA17_Chr1g0212331 26.562 192 119 5 496 676 522 702 1.72e-13 75.5
Msa0138500 MtrunA17_Chr2g0281601 38.095 126 77 1 705 830 1148 1272 6.26e-17 86.7
Msa0138500 MtrunA17_Chr2g0281601 26.728 217 133 6 465 670 752 953 3.34e-11 67.8
Msa0138500 MtrunA17_Chr1g0190391 29.614 233 127 9 364 565 569 795 4.09e-16 83.6
Msa0138500 MtrunA17_Chr2g0320781 33.333 120 75 2 707 821 111 230 5.49e-12 67.0
Msa0138500 MtrunA17_Chr3g0086111 23.938 259 166 9 379 622 187 429 7.38e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138500 AT3G06010.1 70.452 1083 283 9 5 1065 15 1082 0.0 1516
Msa0138500 AT5G19310.1 66.178 1091 318 11 2 1080 7 1058 0.0 1388
Msa0138500 AT5G19310.2 68.029 832 223 9 253 1080 2 794 0.0 1101
Msa0138500 AT2G28290.1 42.783 769 392 11 161 902 539 1286 7.25e-180 585
Msa0138500 AT2G28290.6 42.783 769 392 11 161 902 540 1287 7.36e-180 585
Msa0138500 AT2G28290.5 42.783 769 392 11 161 902 540 1287 7.46e-180 585
Msa0138500 AT2G28290.3 42.783 769 392 11 161 902 539 1286 7.72e-180 585
Msa0138500 AT2G28290.4 42.783 769 392 11 161 902 539 1286 7.72e-180 585
Msa0138500 AT2G28290.2 42.783 769 392 11 161 902 539 1286 9.15e-180 584
Msa0138500 AT2G46020.2 39.717 778 365 16 225 920 815 1570 8.42e-152 500
Msa0138500 AT2G46020.3 39.717 778 365 16 225 920 815 1570 8.42e-152 500
Msa0138500 AT2G46020.4 39.717 778 365 16 225 920 815 1570 8.42e-152 500
Msa0138500 AT5G18620.1 46.869 527 259 9 366 886 182 693 1.40e-151 480
Msa0138500 AT5G18620.2 46.869 527 259 9 366 886 182 693 1.64e-151 480
Msa0138500 AT2G46020.5 39.846 778 363 17 225 920 815 1569 2.60e-151 499
Msa0138500 AT2G46020.1 39.846 778 363 17 225 920 815 1569 2.60e-151 499
Msa0138500 AT2G46020.6 39.846 778 363 17 225 920 815 1569 2.60e-151 499
Msa0138500 AT3G06400.3 46.881 529 256 10 366 886 177 688 3.47e-151 479
Msa0138500 AT3G06400.1 46.881 529 256 10 366 886 177 688 3.63e-151 478
Msa0138500 AT3G06400.2 46.881 529 256 10 366 886 177 688 4.13e-151 478
Msa0138500 AT2G13370.1 47.239 489 232 7 366 839 612 1089 5.85e-128 429
Msa0138500 AT2G13370.2 47.239 489 232 7 366 839 612 1089 5.85e-128 429
Msa0138500 AT2G13370.3 47.239 489 232 7 366 839 612 1089 5.85e-128 429
Msa0138500 AT5G66750.1 42.617 535 281 11 373 885 196 726 9.28e-128 408
Msa0138500 AT2G25170.1 41.255 526 261 10 371 869 266 770 9.60e-112 379
Msa0138500 AT2G25170.4 41.255 526 261 10 371 869 266 770 9.60e-112 379
Msa0138500 AT2G25170.3 41.255 526 261 10 371 869 292 796 1.91e-111 378
Msa0138500 AT2G25170.2 41.255 526 261 10 371 869 283 787 2.00e-111 378
Msa0138500 AT2G44980.1 41.015 473 260 9 379 838 51 517 1.85e-107 356
Msa0138500 AT2G44980.3 39.425 487 266 7 379 838 51 535 9.13e-107 355
Msa0138500 AT2G44980.2 39.139 488 267 8 379 838 51 536 1.84e-104 348
Msa0138500 AT4G31900.2 42.739 482 236 14 371 838 177 632 3.94e-104 354
Msa0138500 AT4G31900.1 42.739 482 236 14 371 838 218 673 4.44e-104 354
Msa0138500 AT4G31900.3 42.739 482 236 14 371 838 218 673 4.60e-104 354
Msa0138500 AT5G44800.1 40.530 528 271 12 367 874 677 1181 1.85e-101 353
Msa0138500 AT2G02090.1 37.132 544 246 14 379 842 213 740 1.18e-85 294
Msa0138500 AT3G12810.1 42.815 341 185 4 339 673 491 827 3.98e-75 273
Msa0138500 AT3G12810.1 53.165 158 73 1 688 845 1074 1230 1.49e-46 183
Msa0138500 AT3G12810.2 42.815 341 185 4 339 673 487 823 4.04e-75 273
Msa0138500 AT3G12810.2 53.165 158 73 1 688 845 1070 1226 1.48e-46 183
Msa0138500 AT3G54280.1 34.034 523 280 16 378 840 1450 1967 4.65e-72 264
Msa0138500 AT3G54280.2 34.034 523 280 16 378 840 1481 1998 1.03e-71 263
Msa0138500 AT2G18760.4 32.353 510 280 12 378 839 384 876 1.75e-71 260
Msa0138500 AT2G18760.1 32.353 510 280 12 378 839 384 876 1.75e-71 260
Msa0138500 AT2G18760.2 32.353 510 280 12 378 839 384 876 1.75e-71 260
Msa0138500 AT2G18760.7 32.353 510 280 12 378 839 384 876 1.75e-71 260
Msa0138500 AT2G18760.5 32.353 510 280 12 378 839 384 876 1.75e-71 260
Msa0138500 AT2G18760.6 32.353 510 280 12 378 839 384 876 1.75e-71 260
Msa0138500 AT2G18760.3 32.353 510 280 12 378 839 443 935 3.53e-71 259
Msa0138500 AT3G57300.3 33.068 502 287 15 212 671 394 888 4.57e-69 253
Msa0138500 AT3G57300.1 32.869 502 288 15 212 671 394 888 5.53e-69 254
Msa0138500 AT3G57300.1 53.247 154 71 1 688 841 1205 1357 1.26e-40 164
Msa0138500 AT3G57300.4 32.869 502 288 15 212 671 394 888 5.53e-69 254
Msa0138500 AT3G57300.4 53.247 154 71 1 688 841 1205 1357 1.26e-40 164
Msa0138500 AT3G19210.3 33.399 509 287 14 379 839 180 684 3.07e-68 245
Msa0138500 AT3G19210.2 33.202 506 290 12 379 839 180 682 3.13e-68 247
Msa0138500 AT3G19210.1 33.399 509 287 14 379 839 180 684 7.01e-68 246
Msa0138500 AT5G63950.1 31.356 590 293 19 354 858 338 900 5.44e-66 243
Msa0138500 AT3G57300.2 30.654 535 289 15 212 671 394 921 4.34e-64 238
Msa0138500 AT3G57300.2 53.247 154 71 1 688 841 1238 1390 1.32e-40 164
Msa0138500 AT5G63950.2 31.724 580 287 20 354 858 338 883 1.09e-62 233
Msa0138500 AT1G03750.1 32.270 282 165 7 379 642 139 412 1.20e-35 147
Msa0138500 AT1G03750.1 47.887 142 73 1 685 826 524 664 5.89e-31 132
Msa0138500 AT1G48310.1 26.004 473 297 14 378 831 171 609 2.22e-29 126
Msa0138500 AT1G48310.2 26.004 473 297 14 378 831 176 614 2.24e-29 126
Msa0138500 AT1G48310.3 26.004 473 297 14 378 831 171 609 3.25e-29 125
Msa0138500 AT5G43530.1 28.173 323 174 10 400 676 683 993 9.25e-26 115
Msa0138500 AT5G43530.1 34.831 178 108 4 686 861 1106 1277 4.17e-20 97.4
Msa0138500 AT2G21450.2 25.437 515 309 17 378 830 271 772 4.94e-23 106
Msa0138500 AT1G08600.1 40.244 164 85 3 688 838 1093 1256 4.95e-23 107
Msa0138500 AT1G08600.1 25.074 339 207 11 358 668 699 1018 1.56e-20 99.0
Msa0138500 AT1G08600.4 40.244 164 85 3 688 838 1114 1277 5.52e-23 107
Msa0138500 AT1G08600.4 24.642 349 217 12 358 668 699 1039 1.35e-19 95.9
Msa0138500 AT1G08600.3 40.244 164 85 3 688 838 1114 1277 5.52e-23 107
Msa0138500 AT1G08600.3 24.642 349 217 12 358 668 699 1039 1.35e-19 95.9
Msa0138500 AT1G08600.2 40.244 164 85 3 688 838 1114 1277 5.52e-23 107
Msa0138500 AT1G08600.2 24.642 349 217 12 358 668 699 1039 1.35e-19 95.9
Msa0138500 AT5G22750.1 26.857 350 171 12 399 678 414 748 5.53e-23 106
Msa0138500 AT5G22750.1 37.671 146 88 2 688 831 862 1006 1.81e-22 105
Msa0138500 AT2G21450.1 25.437 515 309 17 378 830 264 765 5.60e-23 106
Msa0138500 AT1G05490.1 26.149 348 206 8 504 820 1008 1335 6.97e-23 106
Msa0138500 AT2G21450.3 24.665 523 303 17 378 830 173 674 1.01e-22 105
Msa0138500 AT3G16600.1 26.849 365 187 13 356 673 28 359 3.52e-20 96.7
Msa0138500 AT5G05130.1 38.211 123 75 1 709 830 729 851 1.31e-19 95.5
Msa0138500 AT5G05130.1 22.346 537 288 16 320 757 183 689 1.36e-14 79.3
Msa0138500 AT5G20420.1 23.077 507 296 14 395 821 707 1199 1.83e-18 92.0
Msa0138500 AT1G11100.3 37.778 135 79 3 704 835 971 1103 7.00e-18 90.1
Msa0138500 AT1G11100.5 37.778 135 79 3 704 835 927 1059 7.73e-18 90.1
Msa0138500 AT1G11100.5 24.093 386 210 14 351 668 369 739 2.85e-16 84.7
Msa0138500 AT1G11100.4 38.168 131 76 3 704 831 1114 1242 8.93e-18 89.7
Msa0138500 AT1G11100.2 38.168 131 76 3 704 831 1113 1241 9.48e-18 89.7
Msa0138500 AT1G11100.1 38.168 131 76 3 704 831 1070 1198 9.57e-18 89.7
Msa0138500 AT1G11100.1 24.093 386 210 14 351 668 512 882 2.09e-16 85.5
Msa0138500 AT1G05120.2 37.692 130 78 2 702 830 720 847 2.85e-17 87.8
Msa0138500 AT1G05120.1 37.692 130 78 2 702 830 677 804 3.17e-17 87.8
Msa0138500 AT1G02670.4 25.538 372 189 14 361 670 106 451 5.04e-17 86.3
Msa0138500 AT1G02670.6 25.538 372 189 14 361 670 79 424 6.12e-17 86.7
Msa0138500 AT1G02670.6 37.600 125 75 2 707 830 512 634 7.50e-16 82.8
Msa0138500 AT1G02670.5 25.538 372 189 14 361 670 79 424 6.42e-17 86.3
Msa0138500 AT1G02670.5 36.792 106 64 2 707 811 512 615 1.91e-13 75.1
Msa0138500 AT1G02670.3 25.538 372 189 14 361 670 106 451 6.75e-17 86.3
Msa0138500 AT1G02670.3 37.600 125 75 2 707 830 539 661 8.17e-16 82.8
Msa0138500 AT1G02670.2 25.538 372 189 14 361 670 106 451 8.53e-17 85.9
Msa0138500 AT1G02670.2 36.792 106 64 2 707 811 539 642 2.03e-13 75.1
Msa0138500 AT1G02670.1 27.714 350 186 14 361 670 117 439 9.75e-17 85.9
Msa0138500 AT1G02670.1 37.600 125 75 2 707 830 527 649 1.19e-15 82.4
Msa0138500 AT1G02670.7 27.714 350 186 14 361 670 106 428 1.11e-16 85.5
Msa0138500 AT1G02670.7 37.600 125 75 2 707 830 516 638 1.20e-15 82.4
Msa0138500 AT1G61140.3 36.154 130 82 1 701 830 961 1089 1.20e-16 86.3
Msa0138500 AT1G61140.3 26.702 191 119 5 496 675 624 804 1.56e-11 69.3
Msa0138500 AT1G61140.1 36.154 130 82 1 701 830 1119 1247 1.48e-16 85.9
Msa0138500 AT1G61140.1 26.702 191 119 5 496 675 782 962 1.17e-11 69.7
Msa0138500 AT3G42670.4 23.684 494 295 15 401 821 711 1195 2.82e-16 85.1
Msa0138500 AT3G42670.2 23.684 494 295 15 401 821 709 1193 2.84e-16 85.1
Msa0138500 AT3G42670.3 23.684 494 295 15 401 821 709 1193 2.84e-16 85.1
Msa0138500 AT3G42670.1 23.684 494 295 15 401 821 709 1193 2.84e-16 85.1
Msa0138500 AT3G24340.1 25.150 334 207 11 504 814 744 1057 3.48e-16 84.7
Msa0138500 AT1G50410.2 38.281 128 74 3 707 831 828 953 1.63e-15 82.4
Msa0138500 AT1G50410.2 25.909 220 138 6 492 697 462 670 4.02e-12 71.2
Msa0138500 AT1G50410.1 38.281 128 74 3 707 831 828 953 1.63e-15 82.4
Msa0138500 AT1G50410.1 25.909 220 138 6 492 697 462 670 4.02e-12 71.2
Msa0138500 AT1G50410.3 38.281 128 74 3 707 831 828 953 1.63e-15 82.4
Msa0138500 AT1G50410.3 25.909 220 138 6 492 697 462 670 4.02e-12 71.2
Msa0138500 AT3G20010.3 36.800 125 76 2 707 830 628 750 3.24e-15 81.3
Msa0138500 AT3G20010.2 36.800 125 76 2 707 830 603 725 3.78e-15 80.9
Msa0138500 AT3G20010.1 36.800 125 76 2 707 830 894 1016 4.05e-15 81.3
Msa0138500 AT3G20010.5 36.800 125 76 2 707 830 894 1016 4.05e-15 81.3
Msa0138500 AT3G20010.7 36.800 125 76 2 707 830 894 1016 4.05e-15 81.3
Msa0138500 AT1G08060.1 29.167 192 118 4 653 829 515 703 2.50e-13 75.5
Msa0138500 AT1G08060.2 29.167 192 118 4 653 829 515 703 2.50e-13 75.5

Find 259 sgRNAs with CRISPR-Local

Find 557 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTGCCTGCTTGAACTTTA+TGG 0.109414 1_3:-71547186 Msa0138500:CDS
TAACAACTTAAATGGGATTT+TGG 0.130016 1_3:-71543738 Msa0138500:CDS
TTGTTTAATAACAACTTAAA+TGG 0.140802 1_3:-71543746 Msa0138500:CDS
CATCCTCGTGTGCATGTTTC+TGG 0.142540 1_3:+71540286 None:intergenic
GTTAAGAGAATTTGAAATAT+TGG 0.219610 1_3:-71548213 Msa0138500:five_prime_UTR
CTCGATCAGATGAGGAATTT+TGG 0.226416 1_3:-71540746 Msa0138500:CDS
AATAAACTACTTGTAAATTT+AGG 0.234623 1_3:-71544873 Msa0138500:CDS
TCAATAGTTGTGGGAAATTC+TGG 0.237425 1_3:+71540103 None:intergenic
TGACCAGCTCTGCGAAGTTT+TGG 0.243171 1_3:+71541730 None:intergenic
GATTTCAACAGCGGCGTTAC+TGG 0.246227 1_3:-71540603 Msa0138500:CDS
TTCAAGTATCTTAGACTTGA+TGG 0.249288 1_3:-71541637 Msa0138500:CDS
TTCTGGAAATTTGTTCCTTC+AGG 0.253173 1_3:+71540303 None:intergenic
TCCTGCAAACTGTTCTGAAT+TGG 0.266464 1_3:+71542863 None:intergenic
TGCCCCAATCAAACAATTTC+CGG 0.270602 1_3:+71546792 None:intergenic
TCATTCACTCTTAGGTAATT+AGG 0.286088 1_3:-71542633 Msa0138500:intron
TTCAAAGAATGGAATTTATA+AGG 0.287755 1_3:-71544760 Msa0138500:CDS
GGATCTCCAACTCCATAAAA+TGG 0.291884 1_3:+71546752 None:intergenic
AAGAAGCTTGACTTTGTAAC+TGG 0.295255 1_3:+71546043 None:intergenic
CTTAAGAGAAACATAAAGTA+TGG 0.301035 1_3:+71541556 None:intergenic
AGCACCCGGGCAGGCGGTCT+TGG 0.301898 1_3:-71541535 Msa0138500:CDS
CGTTTCTCAAGAAAATTAAA+TGG 0.308348 1_3:-71543303 Msa0138500:CDS
CAAAGGCAGTTCTGCCAAAC+TGG 0.313095 1_3:-71543616 Msa0138500:CDS
TTCTGCCATACATTCAATTC+AGG 0.313549 1_3:-71544646 Msa0138500:CDS
AACGCCGCTGTTGAAATCTT+TGG 0.316353 1_3:+71540608 None:intergenic
CCAACATTTCTCTTCTGTCC+TGG 0.321803 1_3:+71540844 None:intergenic
CCTGCAAACTGTTCTGAATT+GGG 0.322712 1_3:+71542864 None:intergenic
TTGAAACCTGATGCACATTT+CGG 0.340348 1_3:+71547445 None:intergenic
TTATAATCTTCGACAGTGAT+TGG 0.347518 1_3:-71541486 Msa0138500:CDS
TAGGGCGATGTAGGGAGTTC+TGG 0.347834 1_3:-71547514 Msa0138500:CDS
TAACCATCCTTACCTCTTTG+TGG 0.357400 1_3:-71541830 Msa0138500:CDS
GCAATAAAGGAGGAATATTC+AGG 0.357744 1_3:-71543382 Msa0138500:CDS
CGGCTTGTTGATCCATTTGT+GGG 0.360056 1_3:+71541461 None:intergenic
CTGACCGGAAATTGTTTGAT+TGG 0.366516 1_3:-71546796 Msa0138500:CDS
TTCTTGATCATCGGCCTTCA+AGG 0.367866 1_3:+71544959 None:intergenic
CAACATTTCTCTTCTGTCCT+GGG 0.367967 1_3:+71540845 None:intergenic
TGACCGGAAATTGTTTGATT+GGG 0.370582 1_3:-71546795 Msa0138500:CDS
CCCAATTCAGAACAGTTTGC+AGG 0.371140 1_3:-71542864 Msa0138500:CDS
GGATGAGAGAAAAGCAATAA+AGG 0.375229 1_3:-71543395 Msa0138500:CDS
GGTGTATGCTCCAATTAAAA+AGG 0.377530 1_3:-71540640 Msa0138500:CDS
GAGGAGATTGTCAGAGCATC+AGG 0.378586 1_3:-71541781 Msa0138500:CDS
ACACTCTCGAAGTTTATTTA+CGG 0.382400 1_3:-71541669 Msa0138500:CDS
TGACGTAGGCAGAGTTGGTT+TGG 0.391039 1_3:-71542494 Msa0138500:CDS
AACATAAAGTATGGGGAGTC+AGG 0.394619 1_3:+71541565 None:intergenic
CAGTTTGGCAGAACTGCCTT+TGG 0.395299 1_3:+71543617 None:intergenic
TTGGCTGATGAAATGGGGCT+TGG 0.400761 1_3:-71543719 Msa0138500:CDS
TATTGACGCGAAAGTCATTC+AGG 0.400900 1_3:-71541329 Msa0138500:CDS
ATTAAGATCATATCAGATAG+AGG 0.404038 1_3:-71543789 Msa0138500:CDS
ATCTGCCCCTGTATTATCAC+TGG 0.410615 1_3:+71540425 None:intergenic
GAGAATTCAATGATCCAGTT+TGG 0.412594 1_3:+71543602 None:intergenic
TGGCTGATGAAATGGGGCTT+GGG 0.413047 1_3:-71543718 Msa0138500:CDS
TGAATATTCCAGGAGAAAAC+AGG 0.413971 1_3:+71540240 None:intergenic
GAGATCAAGCCATCTTGGTC+AGG 0.415137 1_3:-71540208 Msa0138500:CDS
CGTCGAGGTTCAAGCTCACT+TGG 0.415918 1_3:-71540810 Msa0138500:CDS
TTCAGATGGCATTGAACCCT+TGG 0.416951 1_3:-71544817 Msa0138500:CDS
ATTGGAGCATACACCCAATC+TGG 0.419562 1_3:+71540648 None:intergenic
ACCGTTACGCGCCATATCAA+TGG 0.419877 1_3:-71548168 Msa0138500:exon
TCAAACCAAGACCGCCTGCC+CGG 0.419925 1_3:+71541530 None:intergenic
CTCCCAAAACTTCGCAGAGC+TGG 0.420781 1_3:-71541733 Msa0138500:CDS
GATCATCGGCCTTCAAGGCT+TGG 0.421253 1_3:+71544964 None:intergenic
CAACTCCGTTCAAAATTTCG+AGG 0.421472 1_3:-71542801 Msa0138500:CDS
TCGGCTTGTTGATCCATTTG+TGG 0.421732 1_3:+71541460 None:intergenic
GACTCTAACGATTTACTTGA+AGG 0.422125 1_3:-71544684 Msa0138500:CDS
TTCGAATACAAAGGTGTGTC+TGG 0.422273 1_3:-71543659 Msa0138500:CDS
CACGAGGATGTCAGTGGAAG+TGG 0.422769 1_3:-71540273 Msa0138500:CDS
ATTAAAACTATTCTTTATGA+TGG 0.430849 1_3:-71543424 Msa0138500:CDS
TGTTTAATAACAACTTAAAT+GGG 0.432681 1_3:-71543745 Msa0138500:CDS
ATTCAAATGGAAGAGCAAAC+TGG 0.433262 1_3:-71540158 Msa0138500:CDS
GAGTCAGATGCTTCAAAGAA+TGG 0.434983 1_3:-71544771 Msa0138500:CDS
TTCAGGCTTGAATCTCTTTG+AGG 0.438431 1_3:+71540320 None:intergenic
AACCATCCTTACCTCTTTGT+GGG 0.439855 1_3:-71541829 Msa0138500:CDS
GGCAAAGACAAAGGGCAACC+CGG 0.439976 1_3:-71545004 Msa0138500:CDS
TGTCAAAGCTTTCAGCTAAA+GGG 0.444668 1_3:-71540497 Msa0138500:CDS
AAGAAGAGATCAAGCCATCT+TGG 0.445305 1_3:-71540213 Msa0138500:CDS
AGGTCCTCTCCCCTGCTTGA+AGG 0.445320 1_3:+71547216 None:intergenic
CTACAGAAAATGACAGAACT+TGG 0.445579 1_3:-71540368 Msa0138500:CDS
CCGTTCAAAATTTCGAGGAC+TGG 0.446102 1_3:-71542796 Msa0138500:CDS
CCACTTGATTGTTGCTCCAA+AGG 0.447607 1_3:-71543633 Msa0138500:CDS
TAGTGAAAATGATGAGAAAC+TGG 0.447706 1_3:-71540066 Msa0138500:three_prime_UTR
CATACATTCAATTCAGGAAA+AGG 0.448936 1_3:-71544640 Msa0138500:intron
TTGTGAATCTAGGGCGATGT+AGG 0.453498 1_3:-71547523 Msa0138500:intron
AGTAGAGGACATAATTCAAA+TGG 0.455993 1_3:-71540171 Msa0138500:CDS
CTCACAAATGACTCGACTCA+TGG 0.460052 1_3:-71541692 Msa0138500:CDS
ATTTCTTCCTGGGAAATCTC+AGG 0.462135 1_3:-71542572 Msa0138500:CDS
AACCAGAATTGCCTTCAAGC+AGG 0.462168 1_3:-71547227 Msa0138500:intron
CTGATGTGAGTTCTGAATAC+TGG 0.462357 1_3:-71546841 Msa0138500:CDS
AATTCTCAACGTGGGCTCCT+AGG 0.463019 1_3:-71543586 Msa0138500:intron
ATGTCAAAGCTTTCAGCTAA+AGG 0.463108 1_3:-71540498 Msa0138500:CDS
AAGAACAACTATTAATCATT+CGG 0.463146 1_3:-71542727 Msa0138500:CDS
GGAATCTCAATTTCTCTGCC+CGG 0.463269 1_3:+71544985 None:intergenic
ATTGCTGTTGAGACGATAGA+TGG 0.465300 1_3:+71548037 None:intergenic
TGAACGGAGTTGAAAATGCT+TGG 0.465839 1_3:+71542812 None:intergenic
CAACGTCCGAAATGTGCATC+AGG 0.468461 1_3:-71547451 Msa0138500:CDS
ATTGAGATTCCAAGCCTTGA+AGG 0.469029 1_3:-71544973 Msa0138500:CDS
GAGAGCAGAAATGAGTGTTT+TGG 0.472873 1_3:+71548115 None:intergenic
CAATCAAACAATTTCCGGTC+AGG 0.474699 1_3:+71546797 None:intergenic
GCCGTCATCAAAATCAGATT+CGG 0.478355 1_3:-71547402 Msa0138500:CDS
AGCAGCTGTTCAACGTCAAA+AGG 0.481460 1_3:-71544850 Msa0138500:CDS
GTCGAGTCATTTGTGAGAAA+AGG 0.481891 1_3:+71541698 None:intergenic
CAAGCAGGCACTTTGTCTGC+AGG 0.482300 1_3:+71547196 None:intergenic
ACATCAACTCGGTCTGCAAA+GGG 0.483206 1_3:+71542764 None:intergenic
CAGAGTTGCAGTCGAAGGTT+CGG 0.483285 1_3:-71546865 Msa0138500:CDS
AACTTCACGTTCAATAGTTG+TGG 0.486945 1_3:+71540093 None:intergenic
AATGCGATGTGCTCGGTCCT+CGG 0.487503 1_3:+71541441 None:intergenic
TTTGTCCAATGCGATGTGCT+CGG 0.491807 1_3:+71541434 None:intergenic
GGACGAAGAGAGAAGACAAA+AGG 0.493611 1_3:-71540709 Msa0138500:CDS
GCACAAGCCAGTGATAATAC+AGG 0.494059 1_3:-71540432 Msa0138500:CDS
CAGTGATTGGAACCCACAAA+TGG 0.495113 1_3:-71541473 Msa0138500:CDS
GAGCAACCGTCTATACTTCA+AGG 0.495756 1_3:-71543818 Msa0138500:CDS
TGCATCAGGTTTCAAGTTGG+AGG 0.497243 1_3:-71547437 Msa0138500:CDS
TTATCAGCATCCATGGCAAA+TGG 0.497860 1_3:+71546731 None:intergenic
GGATGTCAGTGGAAGTGGAT+TGG 0.498594 1_3:-71540268 Msa0138500:CDS
AAGGAGGAATATTCAGGAGA+GGG 0.498676 1_3:-71543376 Msa0138500:CDS
ATCAGATAGAGGGGCTCCAA+TGG 0.501388 1_3:-71543778 Msa0138500:CDS
AAGAGCATGAATTGCCAGAT+TGG 0.503500 1_3:-71540662 Msa0138500:CDS
CATGTAAGCTTCTTGATCAT+CGG 0.504238 1_3:+71544950 None:intergenic
AGAGCGTGCGAAACAAAAGA+TGG 0.505221 1_3:-71541353 Msa0138500:CDS
GAATCTCAATTTCTCTGCCC+GGG 0.505281 1_3:+71544986 None:intergenic
TTAGGCCCTTCATATTAAGA+AGG 0.505635 1_3:-71542615 Msa0138500:CDS
ACAGAGGAATGATGGTATCC+AGG 0.506261 1_3:-71546007 Msa0138500:intron
TTGGAAGAAGAAAATTAAGC+AGG 0.506286 1_3:+71542831 None:intergenic
TGACTCAGGTAAATCAGCTT+CGG 0.507128 1_3:+71544788 None:intergenic
CTATGATATGTATAAATGTA+AGG 0.507681 1_3:-71541803 Msa0138500:CDS
AAACTATTCTTTATGATGGA+CGG 0.508309 1_3:-71543420 Msa0138500:CDS
CGGTTAATTTCTCTCTCGCT+AGG 0.509289 1_3:+71540777 None:intergenic
AAACTACAGATCACGTCTCA+TGG 0.510288 1_3:-71540685 Msa0138500:CDS
TCCATTGATATGGCGCGTAA+CGG 0.510588 1_3:+71548167 None:intergenic
ACGTTGTGAGCGTGAGATCA+AGG 0.511075 1_3:-71548241 Msa0138500:five_prime_UTR
AATGGAAGAAAAGAAAGAAA+AGG 0.514282 1_3:-71548150 Msa0138500:CDS
CAAACCAAGACCGCCTGCCC+GGG 0.516644 1_3:+71541531 None:intergenic
TGATATGTCAGCCTGGCAAA+AGG 0.517444 1_3:-71542536 Msa0138500:CDS
TTCTTTGAAGCATCTGACTC+AGG 0.520835 1_3:+71544774 None:intergenic
TAAACAAAGAAAGCATCCAT+TGG 0.520870 1_3:+71543762 None:intergenic
TAAATGGATCTACTTAATTG+TGG 0.523221 1_3:-71543287 Msa0138500:CDS
AGAACAGTTTGCAGGAATTG+TGG 0.523248 1_3:-71542856 Msa0138500:CDS
TGAATTATGTCCTCTACTCT+CGG 0.523605 1_3:+71540176 None:intergenic
GTTAGCAGAGTTGCAGTCGA+AGG 0.523984 1_3:-71546870 Msa0138500:CDS
CGGAGAAAACAGAGGAATGA+TGG 0.525143 1_3:-71546015 Msa0138500:CDS
ACCAGAATTGCCTTCAAGCA+GGG 0.527930 1_3:-71547226 Msa0138500:intron
ATCAGCTTCGGAATCTTCCA+AGG 0.529165 1_3:+71544800 None:intergenic
GCAAAGACAAAGGGCAACCC+GGG 0.531802 1_3:-71545003 Msa0138500:CDS
GCTACAATGGATGCAGGCTA+TGG 0.531969 1_3:-71540535 Msa0138500:CDS
CAATTGATTATCAGCATCCA+TGG 0.532221 1_3:+71546724 None:intergenic
CCAGGACAGAAGAGAAATGT+TGG 0.532850 1_3:-71540844 Msa0138500:CDS
TTACAAAACGGGTTTACGTA+CGG 0.532985 1_3:+71548279 None:intergenic
GGCTTGAATCTCTTTGAGGA+AGG 0.533698 1_3:+71540324 None:intergenic
CTCTTAAGCACCCGGGCAGG+CGG 0.536499 1_3:-71541541 Msa0138500:CDS
GTTACTGACGTAGGCAGAGT+TGG 0.536801 1_3:-71542499 Msa0138500:CDS
GCATGGAAGGCAAAGACAAA+GGG 0.537728 1_3:-71545012 Msa0138500:CDS
TTAAGAGAAACATAAAGTAT+GGG 0.538503 1_3:+71541557 None:intergenic
TGCAGGCTATGGAGAATGGT+GGG 0.539260 1_3:-71540524 Msa0138500:CDS
TGTGAATCTAGGGCGATGTA+GGG 0.540965 1_3:-71547522 Msa0138500:intron
GACCGGAAATTGTTTGATTG+GGG 0.541415 1_3:-71546794 Msa0138500:CDS
TTATGTTTCTCTTAAGCACC+CGG 0.541604 1_3:-71541549 Msa0138500:CDS
ATCTACTTAATTGTGGATGA+AGG 0.541631 1_3:-71543280 Msa0138500:CDS
CACAAGCCAGTGATAATACA+GGG 0.542698 1_3:-71540431 Msa0138500:CDS
GACATCAACTCGGTCTGCAA+AGG 0.543242 1_3:+71542763 None:intergenic
AAAGTCAAGCTTCTTTGAAG+CGG 0.543750 1_3:-71546035 Msa0138500:CDS
TTTCTCTTAAGCACCCGGGC+AGG 0.544462 1_3:-71541544 Msa0138500:CDS
ACGGAGTCGAGGAGATGAGA+AGG 0.544662 1_3:+71548065 None:intergenic
ACTGTCAAGATTAGAAGAGG+TGG 0.549071 1_3:-71546133 Msa0138500:CDS
GTTTCAAGTTGGAGGAAGCA+AGG 0.549136 1_3:-71547429 Msa0138500:CDS
TCAAGAAGCTTACATGAGAA+TGG 0.550878 1_3:-71544943 Msa0138500:CDS
TTAAGATCATATCAGATAGA+GGG 0.551520 1_3:-71543788 Msa0138500:CDS
GTCGAGGTTCAAGCTCACTT+GGG 0.554200 1_3:-71540809 Msa0138500:CDS
ACTTCACGTTCAATAGTTGT+GGG 0.554584 1_3:+71540094 None:intergenic
ATCAACTCGGTCTGCAAAGG+GGG 0.555422 1_3:+71542766 None:intergenic
TTTGAGTTTAAAATTAGTCA+TGG 0.555489 1_3:-71540129 Msa0138500:three_prime_UTR
CATCGGTTAAATGAGCTTCA+AGG 0.558068 1_3:-71547379 Msa0138500:intron
GAGTGAGCTACAATGGATGC+AGG 0.559731 1_3:-71540541 Msa0138500:CDS
TAATCAATTGAGGAAGAGAC+GGG 0.561344 1_3:-71546711 Msa0138500:CDS
AGGAGGAATATTCAGGAGAG+GGG 0.562238 1_3:-71543375 Msa0138500:CDS
TCGAGGAGATGAGAAGGAAG+AGG 0.562339 1_3:+71548071 None:intergenic
TGAGAGAAAAGCAATAAAGG+AGG 0.564334 1_3:-71543392 Msa0138500:CDS
AGAGCATGAATTGCCAGATT+GGG 0.565544 1_3:-71540661 Msa0138500:CDS
TAGTCTCCCACAAAGAGGTA+AGG 0.566070 1_3:+71541823 None:intergenic
ATTGCCTTCAAGCAGGGGAG+AGG 0.566364 1_3:-71547220 Msa0138500:CDS
ATCAAAATCAGATTCGGCAT+CGG 0.566399 1_3:-71547396 Msa0138500:CDS
TCAACGAAAACTGAAGAAAG+AGG 0.570765 1_3:-71541613 Msa0138500:CDS
GGCAGAGTTGGTTTGGACAA+CGG 0.571123 1_3:-71542487 Msa0138500:intron
GCTTGAACTTTATGGACTGA+AGG 0.571172 1_3:-71547178 Msa0138500:intron
AGAATTGTACCTATTGTCCA+AGG 0.572269 1_3:+71543219 None:intergenic
GAGACGATAGATGGAAGAAA+CGG 0.575183 1_3:+71548046 None:intergenic
ATAATCAATTGAGGAAGAGA+CGG 0.576663 1_3:-71546712 Msa0138500:CDS
GAGGACCGAGCACATCGCAT+TGG 0.577318 1_3:-71541439 Msa0138500:CDS
GACGCGAAAGTCATTCAGGC+AGG 0.578983 1_3:-71541325 Msa0138500:CDS
CCTTTGGAGCAACAATCAAG+TGG 0.580581 1_3:+71543633 None:intergenic
TAGTGTGGGGTCAGTTGAAG+AGG 0.580981 1_3:-71541383 Msa0138500:CDS
TGGATGCAGGCTATGGAGAA+TGG 0.581371 1_3:-71540528 Msa0138500:CDS
CAGTCAACAAAAGTCTTCGT+TGG 0.581585 1_3:+71542891 None:intergenic
TCAAATGTGATATGTCAGCC+TGG 0.581914 1_3:-71542543 Msa0138500:CDS
AGATGGAAGAAACGGAGTCG+AGG 0.585880 1_3:+71548054 None:intergenic
ATACATTGAGTGAGCTACAA+TGG 0.588022 1_3:-71540548 Msa0138500:CDS
CTGCAAACTGTTCTGAATTG+GGG 0.589467 1_3:+71542865 None:intergenic
TACAGAAAATGACAGAACTT+GGG 0.593692 1_3:-71540367 Msa0138500:CDS
AAGGACTTCAAACATTCAGA+TGG 0.595277 1_3:-71544831 Msa0138500:CDS
CCTTGCTGCTCGATCAGATG+AGG 0.595520 1_3:-71540754 Msa0138500:CDS
TCAAAGAGATTCAAGCCTGA+AGG 0.596565 1_3:-71540318 Msa0138500:CDS
GACTTTGTAACTGGAGCTCG+CGG 0.596770 1_3:+71546052 None:intergenic
TCGAGGTTCAAGCTCACTTG+GGG 0.597914 1_3:-71540808 Msa0138500:CDS
ATAGATTCTGATCACAATGA+TGG 0.598466 1_3:-71544708 Msa0138500:CDS
GGACAGAAGAGAAATGTTGG+AGG 0.599485 1_3:-71540841 Msa0138500:CDS
CTCCAACTCCATAAAATGGA+CGG 0.599520 1_3:+71546756 None:intergenic
TCAGTCCATAAAGTTCAAGC+AGG 0.599564 1_3:+71547181 None:intergenic
GGCATGGAAGGCAAAGACAA+AGG 0.600109 1_3:-71545013 Msa0138500:CDS
ATGTGCATCAGGTTTCAAGT+TGG 0.600166 1_3:-71547440 Msa0138500:CDS
AGTATGACCTGAGATTTCCC+AGG 0.601582 1_3:+71542565 None:intergenic
CTCCCACAAAGAGGTAAGGA+TGG 0.601658 1_3:+71541827 None:intergenic
TTTGTGAGAAAAGGAGGACT+CGG 0.601829 1_3:+71541707 None:intergenic
GAGGAAGAGACGGGATTCTG+AGG 0.601982 1_3:-71546702 Msa0138500:intron
TCTCCACCTTGAAGTATAGA+CGG 0.602278 1_3:+71543812 None:intergenic
TATTCTTTATGATGGACGGA+TGG 0.604900 1_3:-71543416 Msa0138500:CDS
CCAGAATTGCCTTCAAGCAG+GGG 0.605718 1_3:-71547225 Msa0138500:intron
GTGCTATGCTGTCAGATGAG+AGG 0.606802 1_3:+71540451 None:intergenic
TGAAAGCATATTACAGTCGA+GGG 0.607958 1_3:-71540403 Msa0138500:CDS
CTTTGGAGCAACAATCAAGT+GGG 0.609578 1_3:+71543634 None:intergenic
GAGTCATTTGTGAGAAAAGG+AGG 0.609743 1_3:+71541701 None:intergenic
TAATTGTGGATGAAGGTCAT+CGG 0.611050 1_3:-71543273 Msa0138500:CDS
TTTCAAGTTGGAGGAAGCAA+GGG 0.614113 1_3:-71547428 Msa0138500:CDS
GAGACTGTCAAGATTAGAAG+AGG 0.614539 1_3:-71546136 Msa0138500:CDS
ATGAAAGCATATTACAGTCG+AGG 0.614692 1_3:-71540404 Msa0138500:CDS
TAAGAGAAACATAAAGTATG+GGG 0.614998 1_3:+71541558 None:intergenic
GGTTCAGCATCCGAGAGTAG+AGG 0.615085 1_3:-71540186 Msa0138500:CDS
TTGAATGTGCATATCCTGAC+CGG 0.618584 1_3:-71546811 Msa0138500:CDS
CTATGCTGTCAGATGAGAGG+TGG 0.620566 1_3:+71540454 None:intergenic
AGTTGGAGATCCATTTGCCA+TGG 0.620794 1_3:-71546741 Msa0138500:CDS
AGATCAAGCCATCTTGGTCA+GGG 0.623362 1_3:-71540207 Msa0138500:CDS
TGGATGCTGATAATCAATTG+AGG 0.625059 1_3:-71546721 Msa0138500:CDS
GAGCGTGCGAAACAAAAGAT+GGG 0.626110 1_3:-71541352 Msa0138500:CDS
TATCATAGTCTCCCACAAAG+AGG 0.628685 1_3:+71541818 None:intergenic
ATGCTGAACCCTGACCAAGA+TGG 0.632570 1_3:+71540199 None:intergenic
TGGAAGAAGAAAATTAAGCA+GGG 0.637109 1_3:+71542832 None:intergenic
AAAGGAGGAATATTCAGGAG+AGG 0.640306 1_3:-71543377 Msa0138500:CDS
TAAGATCATATCAGATAGAG+GGG 0.646442 1_3:-71543787 Msa0138500:CDS
GGAATTTATAAGGAATCACC+TGG 0.648040 1_3:-71544750 Msa0138500:CDS
TGATATGTATAAATGTAAGG+AGG 0.649388 1_3:-71541800 Msa0138500:CDS
TATCAACAAGTTACTGACGT+AGG 0.649475 1_3:-71542508 Msa0138500:CDS
TCAGCTTCGGAATCTTCCAA+GGG 0.651733 1_3:+71544801 None:intergenic
CATGCACACGAGGATGTCAG+TGG 0.652286 1_3:-71540279 Msa0138500:CDS
GCAGGCTATGGAGAATGGTG+GGG 0.652862 1_3:-71540523 Msa0138500:CDS
CTTTGAAGCGGAGAAAACAG+AGG 0.654138 1_3:-71546023 Msa0138500:CDS
CTGATAGAGAGACATCAACT+CGG 0.654275 1_3:+71542753 None:intergenic
ATGCAGGCTATGGAGAATGG+TGG 0.656882 1_3:-71540525 Msa0138500:CDS
ACAAATGGATCAACAAGCCG+AGG 0.658011 1_3:-71541458 Msa0138500:CDS
CCTCATCTGATCGAGCAGCA+AGG 0.662463 1_3:+71540754 None:intergenic
TTTCCAGAAACATGCACACG+AGG 0.664284 1_3:-71540289 Msa0138500:CDS
TATTCCAGGAGAAAACAGGC+TGG 0.669600 1_3:+71540244 None:intergenic
GCATCTATATCATCATCACC+AGG 0.670708 1_3:+71544732 None:intergenic
CATCAACTCGGTCTGCAAAG+GGG 0.672256 1_3:+71542765 None:intergenic
ACAGCGGCGTTACTGGAAAG+CGG 0.680373 1_3:-71540596 Msa0138500:CDS
GATCATTGAATTCTCAACGT+GGG 0.696160 1_3:-71543594 Msa0138500:CDS
TATGTTTCTCTTAAGCACCC+GGG 0.702765 1_3:-71541548 Msa0138500:CDS
TCTTTGAGGAAGGAGTGACA+TGG 0.705361 1_3:+71540334 None:intergenic
CAACCGTCTATACTTCAAGG+TGG 0.705809 1_3:-71543815 Msa0138500:CDS
AAGGCCAAAGATTTCAACAG+CGG 0.709044 1_3:-71540612 Msa0138500:CDS
TTGGAGGTGATTATGCGTCG+AGG 0.709848 1_3:-71540825 Msa0138500:CDS
TTTGGAGCAACAATCAAGTG+GGG 0.712915 1_3:+71543635 None:intergenic
GGATCATTGAATTCTCAACG+TGG 0.730847 1_3:-71543595 Msa0138500:CDS
ACAAGCCAGTGATAATACAG+GGG 0.752068 1_3:-71540430 Msa0138500:CDS
CATCTGATCGAGCAGCAAGG+CGG 0.764442 1_3:+71540757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATGAACAAATAAAA+TGG + chr1_3:71540653-71540672 None:intergenic 10.0%
!!! TTTTTTTTATAAACTTTGAA+TGG + chr1_3:71542952-71542971 None:intergenic 10.0%
!!! AAAAAATAGATTTTTTTTAG+AGG - chr1_3:71543960-71543979 Msa0138500:intron 10.0%
!!! AAAAAATAATTTAGTTTGTT+TGG + chr1_3:71544055-71544074 None:intergenic 10.0%
!!! AAAAAAAGTGATTTTTATTA+CGG - chr1_3:71544075-71544094 Msa0138500:intron 10.0%
!! ATAAAAGTAATTTCAATAAA+TGG - chr1_3:71546069-71546088 Msa0138500:CDS 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:71541673-71541692 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:71541673-71541692 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:71541673-71541692 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:71541673-71541692 None:intergenic 100.0%
!!! AAAAACTAATTTTACAAAAC+GGG + chr1_3:71540060-71540079 None:intergenic 15.0%
!!! CAAAAACTAATTTTACAAAA+CGG + chr1_3:71540061-71540080 None:intergenic 15.0%
!! AATAGAAATATAATAAGTGA+AGG + chr1_3:71541373-71541392 None:intergenic 15.0%
!! AAATTAAAAAAATTCTCATG+GGG + chr1_3:71543132-71543151 None:intergenic 15.0%
!! GAAATTAAAAAAATTCTCAT+GGG + chr1_3:71543133-71543152 None:intergenic 15.0%
!!! TTTTTAATTTCCAAATATGT+TGG - chr1_3:71543142-71543161 Msa0138500:intron 15.0%
!! AATAAACTACTTGTAAATTT+AGG - chr1_3:71543452-71543471 Msa0138500:intron 15.0%
!!! AATCAATTTATTTCTTGTTA+TGG - chr1_3:71543720-71543739 Msa0138500:CDS 15.0%
!! TTGTTTAATAACAACTTAAA+TGG - chr1_3:71544579-71544598 Msa0138500:intron 15.0%
!! TGTTTAATAACAACTTAAAT+GGG - chr1_3:71544580-71544599 Msa0138500:intron 15.0%
!! AAGAAATAATTTACAATTTC+TGG + chr1_3:71544774-71544793 None:intergenic 15.0%
!! ATTAAAACTATTCTTTATGA+TGG - chr1_3:71544901-71544920 Msa0138500:CDS 15.0%
!!! AATACTTTGATTTTCAATAT+TGG - chr1_3:71545933-71545952 Msa0138500:intron 15.0%
!! AGTAAGATAAAATAAAATCA+AGG - chr1_3:71546165-71546184 Msa0138500:intron 15.0%
!! TTGTTAATTCAACATAAATT+TGG - chr1_3:71546268-71546287 Msa0138500:intron 15.0%
!! TTGCTAAAGTAATATATATT+TGG - chr1_3:71547183-71547202 Msa0138500:CDS 15.0%
!! TGCTAAAGTAATATATATTT+GGG - chr1_3:71547184-71547203 Msa0138500:CDS 15.0%
!!! CGTTTTGTAAAATTAGTTTT+TGG - chr1_3:71540059-71540078 Msa0138500:three_prime_UTR 20.0%
!!! GTTAAGAGAATTTGAAATAT+TGG - chr1_3:71540112-71540131 Msa0138500:three_prime_UTR 20.0%
!!! ATTTCGATTTTTTTGTGTTA+TGG - chr1_3:71540385-71540404 Msa0138500:CDS 20.0%
!! ATTAATCTAGAAAGTTATGT+AGG - chr1_3:71540616-71540635 Msa0138500:CDS 20.0%
!!! TTTATGTTTTTTGTGAATCT+AGG - chr1_3:71540792-71540811 Msa0138500:CDS 20.0%
!!! TTATGTTTTTTGTGAATCTA+GGG - chr1_3:71540793-71540812 Msa0138500:CDS 20.0%
!!! CATATTCTTTTTATACACTT+TGG - chr1_3:71541838-71541857 Msa0138500:CDS 20.0%
!! TATTATCTTACTGTAAATCT+AGG - chr1_3:71541876-71541895 Msa0138500:CDS 20.0%
!!! ATAAAGAAAAAAAAAGTGTC+TGG - chr1_3:71541949-71541968 Msa0138500:intron 20.0%
!! TATTGTAAAAGATGCAATTA+GGG - chr1_3:71542366-71542385 Msa0138500:intron 20.0%
!!! CTAAGTTTTTTCATTAACAT+AGG - chr1_3:71542774-71542793 Msa0138500:CDS 20.0%
!! ATTAACCATTACTATATACA+AGG + chr1_3:71543074-71543093 None:intergenic 20.0%
!! GGAAATTAAAAAAATTCTCA+TGG + chr1_3:71543134-71543153 None:intergenic 20.0%
!! AATTTGTCATTAATTGAACA+TGG - chr1_3:71543256-71543275 Msa0138500:CDS 20.0%
!! TTCAAAGAATGGAATTTATA+AGG - chr1_3:71543565-71543584 Msa0138500:intron 20.0%
!! CTAAAAAAAGCTATAACAAA+CGG + chr1_3:71543804-71543823 None:intergenic 20.0%
!!! TTATTTTAATCCGTAACAAA+CGG - chr1_3:71544179-71544198 Msa0138500:intron 20.0%
!! TATTAAACTTAATTGTCTAC+AGG - chr1_3:71544479-71544498 Msa0138500:intron 20.0%
!! CATTATTGCATATAAACTTA+AGG + chr1_3:71545217-71545236 None:intergenic 20.0%
!! AAGAACAACTATTAATCATT+CGG - chr1_3:71545598-71545617 Msa0138500:intron 20.0%
!!! TTTTTCCTTCTTAATATGAA+GGG + chr1_3:71545718-71545737 None:intergenic 20.0%
!!! TTTTTTCCTTCTTAATATGA+AGG + chr1_3:71545719-71545738 None:intergenic 20.0%
!! ATTAAGAAGGAAAAAAAATG+AGG - chr1_3:71545723-71545742 Msa0138500:intron 20.0%
!! TACATTTGATTGAGTTTAAA+AGG + chr1_3:71545902-71545921 None:intergenic 20.0%
!!! TTGAAAATCAAAGTATTTGA+GGG + chr1_3:71545930-71545949 None:intergenic 20.0%
!!! ATTGAAAATCAAAGTATTTG+AGG + chr1_3:71545931-71545950 None:intergenic 20.0%
!! TGAGAATAAACAAATACATT+TGG + chr1_3:71545963-71545982 None:intergenic 20.0%
!! TAAACATAACTAAACTTCAT+GGG + chr1_3:71546025-71546044 None:intergenic 20.0%
!! ATAAACATAACTAAACTTCA+TGG + chr1_3:71546026-71546045 None:intergenic 20.0%
!! GAAATCAACAAATGTTATAT+GGG + chr1_3:71546345-71546364 None:intergenic 20.0%
!! TGAAATCAACAAATGTTATA+TGG + chr1_3:71546346-71546365 None:intergenic 20.0%
!!! CTACAAATTGATTCATATTT+AGG + chr1_3:71546420-71546439 None:intergenic 20.0%
!! CTAAATATGAATCAATTTGT+AGG - chr1_3:71546418-71546437 Msa0138500:intron 20.0%
!! CTATGATATGTATAAATGTA+AGG - chr1_3:71546522-71546541 Msa0138500:intron 20.0%
!! TTAAGAGAAACATAAAGTAT+GGG + chr1_3:71546771-71546790 None:intergenic 20.0%
!! CAATTACACACAAATTAAAA+AGG + chr1_3:71547166-71547185 None:intergenic 20.0%
!!! TTTGAGTTTAAAATTAGTCA+TGG - chr1_3:71548196-71548215 Msa0138500:five_prime_UTR 20.0%
!! TTTCTTTTCTTCCATTGATA+TGG + chr1_3:71540171-71540190 None:intergenic 25.0%
! AATGGAAGAAAAGAAAGAAA+AGG - chr1_3:71540175-71540194 Msa0138500:CDS 25.0%
!! GGTCAACAATTTTTGTAAAA+AGG - chr1_3:71540967-71540986 Msa0138500:intron 25.0%
! AGCAAATATATGTGCAATAA+AGG + chr1_3:71540998-71541017 None:intergenic 25.0%
!! TTTAGAGTAGAAAAACATCA+AGG + chr1_3:71541229-71541248 None:intergenic 25.0%
!! AGAAGTCTAAGATCAATTAA+AGG + chr1_3:71541817-71541836 None:intergenic 25.0%
! AATTGTATGCATGTATGAAT+GGG + chr1_3:71542007-71542026 None:intergenic 25.0%
! TAATTGTATGCATGTATGAA+TGG + chr1_3:71542008-71542027 None:intergenic 25.0%
! ATACATGCATACAATTATGT+AGG - chr1_3:71542011-71542030 Msa0138500:intron 25.0%
! ATATAGAGACTACAAAAAGA+AGG - chr1_3:71542224-71542243 Msa0138500:intron 25.0%
! CAATACAAAATGAAAGATAG+AGG + chr1_3:71542351-71542370 None:intergenic 25.0%
! GTATTGTAAAAGATGCAATT+AGG - chr1_3:71542365-71542384 Msa0138500:intron 25.0%
!! GTAGAAATAAATTTCAAGTG+TGG - chr1_3:71542740-71542759 Msa0138500:CDS 25.0%
! TTTCATTAACATAGGTTGTA+TGG - chr1_3:71542782-71542801 Msa0138500:CDS 25.0%
!!! TTGTATGGAAGAACTTTTTT+GGG - chr1_3:71542797-71542816 Msa0138500:CDS 25.0%
! GTATGTATTTGTAAGAGTTA+TGG - chr1_3:71542844-71542863 Msa0138500:CDS 25.0%
!!! TGTCTTTATATGCTATTTTG+GGG + chr1_3:71542927-71542946 None:intergenic 25.0%
!!! CTGTCTTTATATGCTATTTT+GGG + chr1_3:71542928-71542947 None:intergenic 25.0%
!!! TCTGTCTTTATATGCTATTT+TGG + chr1_3:71542929-71542948 None:intergenic 25.0%
! TACTATATACAAGGATGTTT+GGG + chr1_3:71543065-71543084 None:intergenic 25.0%
! TTACTATATACAAGGATGTT+TGG + chr1_3:71543066-71543085 None:intergenic 25.0%
! AACATCCTTGTATATAGTAA+TGG - chr1_3:71543066-71543085 Msa0138500:intron 25.0%
! TATATAGTAATGGTTAATGC+TGG - chr1_3:71543076-71543095 Msa0138500:intron 25.0%
! TCTAAATTCTCCAACATATT+TGG + chr1_3:71543155-71543174 None:intergenic 25.0%
! AAAATTACATATAACTGTCC+AGG + chr1_3:71543200-71543219 None:intergenic 25.0%
!! ATTCCCATAATAATTTTTGC+AGG - chr1_3:71543286-71543305 Msa0138500:CDS 25.0%
! ATGCCTGCAAAAATTATTAT+GGG + chr1_3:71543292-71543311 None:intergenic 25.0%
!!! CGTTTGTTATAGCTTTTTTT+AGG - chr1_3:71543802-71543821 Msa0138500:CDS 25.0%
!!! TATTTTAATCCGTAACAAAC+GGG - chr1_3:71544180-71544199 Msa0138500:intron 25.0%
! AATATAAGCCAAATACCTAA+GGG + chr1_3:71544206-71544225 None:intergenic 25.0%
! AAATATAAGCCAAATACCTA+AGG + chr1_3:71544207-71544226 None:intergenic 25.0%
!! TTAGGTATTTGGCTTATATT+TGG - chr1_3:71544206-71544225 Msa0138500:intron 25.0%
!!! ATGCATATTGTCTTTTTAAG+TGG - chr1_3:71544233-71544252 Msa0138500:intron 25.0%
!!! TGCATATTGTCTTTTTAAGT+GGG - chr1_3:71544234-71544253 Msa0138500:intron 25.0%
! AGATAAAAGTTGTAGTACAT+TGG - chr1_3:71544451-71544470 Msa0138500:intron 25.0%
! ATTAAGATCATATCAGATAG+AGG - chr1_3:71544536-71544555 Msa0138500:intron 25.0%
! TTAAGATCATATCAGATAGA+GGG - chr1_3:71544537-71544556 Msa0138500:intron 25.0%
!! TAACAACTTAAATGGGATTT+TGG - chr1_3:71544587-71544606 Msa0138500:intron 25.0%
!! AAACTATTCTTTATGATGGA+CGG - chr1_3:71544905-71544924 Msa0138500:CDS 25.0%
! CGTTTCTCAAGAAAATTAAA+TGG - chr1_3:71545022-71545041 Msa0138500:intron 25.0%
! TAAATGGATCTACTTAATTG+TGG - chr1_3:71545038-71545057 Msa0138500:intron 25.0%
!! TGAAAATCAAAGTATTTGAG+GGG + chr1_3:71545929-71545948 None:intergenic 25.0%
! TATGTTTATTACTACAGTCT+AGG - chr1_3:71546037-71546056 Msa0138500:CDS 25.0%
! CAAATAATTACGACTACAAA+TGG - chr1_3:71546096-71546115 Msa0138500:CDS 25.0%
! AAGAATATTTGTAGGAGAAT+CGG + chr1_3:71546211-71546230 None:intergenic 25.0%
! ATATATCAGGCTAACATAAA+AGG + chr1_3:71546373-71546392 None:intergenic 25.0%
! TAGGAAAAAGTTATTAATGC+AGG + chr1_3:71546401-71546420 None:intergenic 25.0%
! TGATATGTATAAATGTAAGG+AGG - chr1_3:71546525-71546544 Msa0138500:intron 25.0%
! TAAGAGAAACATAAAGTATG+GGG + chr1_3:71546770-71546789 None:intergenic 25.0%
! CTTAAGAGAAACATAAAGTA+TGG + chr1_3:71546772-71546791 None:intergenic 25.0%
!!! ATCTATCAACAGTTACTTTT+TGG - chr1_3:71547082-71547101 Msa0138500:intron 25.0%
! AATTATTCCATTGTAATGTG+CGG - chr1_3:71547377-71547396 Msa0138500:intron 25.0%
! ATGAAAACTATTTGAACATG+TGG - chr1_3:71547440-71547459 Msa0138500:CDS 25.0%
!! TCTTGATTTCACTGTTTCTA+CGG - chr1_3:71540338-71540357 Msa0138500:CDS 30.0%
! CGTTAAATACAGATTTTCTG+TGG - chr1_3:71540491-71540510 Msa0138500:CDS 30.0%
ACTCTAACTAACATAAACTG+CGG + chr1_3:71540739-71540758 None:intergenic 30.0%
AAGATATCGCTTTCATTTAG+TGG + chr1_3:71541032-71541051 None:intergenic 30.0%
GAATTTCAGCTATCAATTTG+TGG + chr1_3:71541327-71541346 None:intergenic 30.0%
! ACATGTTTCTTGTCATTTCT+CGG + chr1_3:71541406-71541425 None:intergenic 30.0%
ATAATCAATTGAGGAAGAGA+CGG - chr1_3:71541613-71541632 Msa0138500:CDS 30.0%
TTAAAGGAGTTGACCAATAA+GGG + chr1_3:71541801-71541820 None:intergenic 30.0%
ATTAAAGGAGTTGACCAATA+AGG + chr1_3:71541802-71541821 None:intergenic 30.0%
CATACAATTATGTAGGAACA+AGG - chr1_3:71542018-71542037 Msa0138500:intron 30.0%
TTTCAGGATCTATATGAGAT+AGG + chr1_3:71542165-71542184 None:intergenic 30.0%
! AGCGTGTATGAAGAATTTTA+AGG - chr1_3:71542672-71542691 Msa0138500:intron 30.0%
! GCGTGTATGAAGAATTTTAA+GGG - chr1_3:71542673-71542692 Msa0138500:intron 30.0%
! CGTGTATGAAGAATTTTAAG+GGG - chr1_3:71542674-71542693 Msa0138500:intron 30.0%
!! AATTTTAAGGGGAAGATGTT+AGG - chr1_3:71542685-71542704 Msa0138500:intron 30.0%
AAATAGAAAAGATGCAAGTG+AGG - chr1_3:71542714-71542733 Msa0138500:intron 30.0%
!!! GTTGTATGGAAGAACTTTTT+TGG - chr1_3:71542796-71542815 Msa0138500:CDS 30.0%
!!! TCTTTATATGCTATTTTGGG+GGG + chr1_3:71542925-71542944 None:intergenic 30.0%
!!! GTCTTTATATGCTATTTTGG+GGG + chr1_3:71542926-71542945 None:intergenic 30.0%
TACAATCGAAGAAGAAATGA+GGG + chr1_3:71542978-71542997 None:intergenic 30.0%
!!! GACATTTTTTCTCTTCTTTG+CGG - chr1_3:71543223-71543242 Msa0138500:intron 30.0%
CATTAATTGAACATGGCTTA+TGG - chr1_3:71543263-71543282 Msa0138500:CDS 30.0%
CATGCCTGCAAAAATTATTA+TGG + chr1_3:71543293-71543312 None:intergenic 30.0%
! CATAATAATTTTTGCAGGCA+TGG - chr1_3:71543291-71543310 Msa0138500:CDS 30.0%
ATAGATTCTGATCACAATGA+TGG - chr1_3:71543617-71543636 Msa0138500:CDS 30.0%
! CTTTTCCTGAATTGAATGTA+TGG + chr1_3:71543687-71543706 None:intergenic 30.0%
CATACATTCAATTCAGGAAA+AGG - chr1_3:71543685-71543704 Msa0138500:CDS 30.0%
TTTAGAGGAGAGAGAAAATA+TGG - chr1_3:71543975-71543994 Msa0138500:intron 30.0%
!!! GCATATTGTCTTTTTAAGTG+GGG - chr1_3:71544235-71544254 Msa0138500:intron 30.0%
CACAATGAATTAGAAGGATA+AGG + chr1_3:71544353-71544372 None:intergenic 30.0%
CTTATCCTTCTAATTCATTG+TGG - chr1_3:71544351-71544370 Msa0138500:intron 30.0%
AAAGACCACAATGAATTAGA+AGG + chr1_3:71544359-71544378 None:intergenic 30.0%
TAAGATCATATCAGATAGAG+GGG - chr1_3:71544538-71544557 Msa0138500:intron 30.0%
!! TAAACAAAGAAAGCATCCAT+TGG + chr1_3:71544566-71544585 None:intergenic 30.0%
ATCTACTTAATTGTGGATGA+AGG - chr1_3:71545045-71545064 Msa0138500:intron 30.0%
AACTTAAGGATATCTAACCA+AGG + chr1_3:71545203-71545222 None:intergenic 30.0%
TGGAAGAAGAAAATTAAGCA+GGG + chr1_3:71545496-71545515 None:intergenic 30.0%
TTGGAAGAAGAAAATTAAGC+AGG + chr1_3:71545497-71545516 None:intergenic 30.0%
TCATTCACTCTTAGGTAATT+AGG - chr1_3:71545692-71545711 Msa0138500:intron 30.0%
AAGAAGGAAAAAAAATGAGG+TGG - chr1_3:71545726-71545745 Msa0138500:intron 30.0%
!! TTGATAATAAACCTTTTGCC+AGG + chr1_3:71545803-71545822 None:intergenic 30.0%
TTGAGTTTAAAAGGAGAAGT+GGG + chr1_3:71545893-71545912 None:intergenic 30.0%
ATTGAGTTTAAAAGGAGAAG+TGG + chr1_3:71545894-71545913 None:intergenic 30.0%
!! TTTTGAAAACTAACCACCAA+GGG + chr1_3:71546002-71546021 None:intergenic 30.0%
CAACTGACAAGAATATTTGT+AGG + chr1_3:71546219-71546238 None:intergenic 30.0%
!!! GTTGCAACTTTTTTATGAAC+TGG - chr1_3:71546235-71546254 Msa0138500:intron 30.0%
! ATGTTATATGGGTAGTGTTT+TGG + chr1_3:71546334-71546353 None:intergenic 30.0%
! AATGCAGGTTCTAATATATC+AGG + chr1_3:71546386-71546405 None:intergenic 30.0%
ATGAATCAATTTGTAGGTAC+TGG - chr1_3:71546424-71546443 Msa0138500:intron 30.0%
ACACTCTCGAAGTTTATTTA+CGG - chr1_3:71546656-71546675 Msa0138500:intron 30.0%
TTCAAGTATCTTAGACTTGA+TGG - chr1_3:71546688-71546707 Msa0138500:intron 30.0%
TTATAATCTTCGACAGTGAT+TGG - chr1_3:71546839-71546858 Msa0138500:CDS 30.0%
TTGGACAAAAAAAGGAAGTT+CGG - chr1_3:71546905-71546924 Msa0138500:intron 30.0%
!!! AGTTACTTTTTGGCTAAAGT+TGG - chr1_3:71547092-71547111 Msa0138500:intron 30.0%
! GTAATATATATTTGGGACGA+AGG - chr1_3:71547191-71547210 Msa0138500:CDS 30.0%
AAGAATCAATAGTTTCTGTG+AGG + chr1_3:71547260-71547279 None:intergenic 30.0%
TTTGAACTGAGAAAAAGTGA+GGG + chr1_3:71547314-71547333 None:intergenic 30.0%
TCTCAGTTCAAACAAATCAA+AGG - chr1_3:71547322-71547341 Msa0138500:intron 30.0%
ATTATTCCATTGTAATGTGC+GGG - chr1_3:71547378-71547397 Msa0138500:intron 30.0%
TCATTTAGCAATATGACCTA+AGG + chr1_3:71547421-71547440 None:intergenic 30.0%
TCCAATTAAAAAGGATGACA+AGG - chr1_3:71547694-71547713 Msa0138500:intron 30.0%
!!! AAGTTCTGTCATTTTCTGTA+GGG + chr1_3:71547958-71547977 None:intergenic 30.0%
TACAGAAAATGACAGAACTT+GGG - chr1_3:71547958-71547977 Msa0138500:intron 30.0%
! CTTCTTTTTGTGAATATTCC+AGG + chr1_3:71548098-71548117 None:intergenic 30.0%
AGTAGAGGACATAATTCAAA+TGG - chr1_3:71548154-71548173 Msa0138500:exon 30.0%
TAGTGAAAATGATGAGAAAC+TGG - chr1_3:71548259-71548278 Msa0138500:five_prime_UTR 30.0%
! TTACAAAACGGGTTTACGTA+CGG + chr1_3:71540049-71540068 None:intergenic 35.0%
GAAATCAAGAAGAGAAGAAG+AGG + chr1_3:71540328-71540347 None:intergenic 35.0%
! CTCTATCGCTTGTTGAAATT+CGG - chr1_3:71540429-71540448 Msa0138500:CDS 35.0%
AGTATGCACAACAAAGCAAT+AGG + chr1_3:71540684-71540703 None:intergenic 35.0%
TTGAAACCTGATGCACATTT+CGG + chr1_3:71540883-71540902 None:intergenic 35.0%
ATCAAAATCAGATTCGGCAT+CGG - chr1_3:71540929-71540948 Msa0138500:intron 35.0%
!! GTACACTAAGCATTGAAGAA+AGG + chr1_3:71541190-71541209 None:intergenic 35.0%
CAATTAAGTGACATGCTGTA+AGG + chr1_3:71541349-71541368 None:intergenic 35.0%
TGACCGGAAATTGTTTGATT+GGG - chr1_3:71541530-71541549 Msa0138500:CDS 35.0%
CAATTGATTATCAGCATCCA+TGG + chr1_3:71541604-71541623 None:intergenic 35.0%
TGGATGCTGATAATCAATTG+AGG - chr1_3:71541604-71541623 Msa0138500:CDS 35.0%
TAATCAATTGAGGAAGAGAC+GGG - chr1_3:71541614-71541633 Msa0138500:CDS 35.0%
AAGTTCAAACCCAAAACTTG+GGG + chr1_3:71541698-71541717 None:intergenic 35.0%
CAAGTTCAAACCCAAAACTT+GGG + chr1_3:71541699-71541718 None:intergenic 35.0%
ATCAGTTTGTATCCCCTTAT+TGG - chr1_3:71541785-71541804 Msa0138500:CDS 35.0%
TAAAGGAGTTGACCAATAAG+GGG + chr1_3:71541800-71541819 None:intergenic 35.0%
CTAGTTAAGTATACACGACT+TGG - chr1_3:71542056-71542075 Msa0138500:intron 35.0%
TGGAAAATCATGCATGTATC+AGG + chr1_3:71542108-71542127 None:intergenic 35.0%
! GATTTTCCAATATCTGAGCA+TGG - chr1_3:71542119-71542138 Msa0138500:intron 35.0%
TTCATTCCATGCTCAGATAT+TGG + chr1_3:71542128-71542147 None:intergenic 35.0%
AAGAAGCTTGACTTTGTAAC+TGG + chr1_3:71542285-71542304 None:intergenic 35.0%
! AAAGTCAAGCTTCTTTGAAG+CGG - chr1_3:71542290-71542309 Msa0138500:intron 35.0%
CTATCATGAACATGTGATGA+GGG - chr1_3:71542563-71542582 Msa0138500:CDS 35.0%
GTTAAAGAGAGATCTCAAAG+AGG - chr1_3:71542590-71542609 Msa0138500:CDS 35.0%
! ACTCAAATCAAGTTGTGGTT+TGG - chr1_3:71542633-71542652 Msa0138500:intron 35.0%
CTACAATCGAAGAAGAAATG+AGG + chr1_3:71542979-71542998 None:intergenic 35.0%
AAAAAATTCTCATGGGGAGA+AGG + chr1_3:71543126-71543145 None:intergenic 35.0%
CATGTAAGCTTCTTGATCAT+CGG + chr1_3:71543378-71543397 None:intergenic 35.0%
TCAAGAAGCTTACATGAGAA+TGG - chr1_3:71543382-71543401 Msa0138500:CDS 35.0%
AAGGACTTCAAACATTCAGA+TGG - chr1_3:71543494-71543513 Msa0138500:intron 35.0%
GGAATTTATAAGGAATCACC+TGG - chr1_3:71543575-71543594 Msa0138500:intron 35.0%
GACTCTAACGATTTACTTGA+AGG - chr1_3:71543641-71543660 Msa0138500:CDS 35.0%
TTCTGCCATACATTCAATTC+AGG - chr1_3:71543679-71543698 Msa0138500:CDS 35.0%
AATTTGCCATTACAGCTGTT+TGG - chr1_3:71543771-71543790 Msa0138500:CDS 35.0%
ATTTGCCATTACAGCTGTTT+GGG - chr1_3:71543772-71543791 Msa0138500:CDS 35.0%
! GTTTTGCTCTAATGTTTACG+AGG - chr1_3:71544324-71544343 Msa0138500:intron 35.0%
! GCACATCTTTTCGAATACAA+AGG - chr1_3:71544657-71544676 Msa0138500:CDS 35.0%
GAGAATTCAATGATCCAGTT+TGG + chr1_3:71544726-71544745 None:intergenic 35.0%
GATCATTGAATTCTCAACGT+GGG - chr1_3:71544731-71544750 Msa0138500:CDS 35.0%
!! TATTCTTTATGATGGACGGA+TGG - chr1_3:71544909-71544928 Msa0138500:CDS 35.0%
GGATGAGAGAAAAGCAATAA+AGG - chr1_3:71544930-71544949 Msa0138500:CDS 35.0%
TGAGAGAAAAGCAATAAAGG+AGG - chr1_3:71544933-71544952 Msa0138500:CDS 35.0%
GCAATAAAGGAGGAATATTC+AGG - chr1_3:71544943-71544962 Msa0138500:CDS 35.0%
TAATTGTGGATGAAGGTCAT+CGG - chr1_3:71545052-71545071 Msa0138500:intron 35.0%
TAGCAAAAACCTTGGACAAT+AGG - chr1_3:71545097-71545116 Msa0138500:intron 35.0%
AGAATTGTACCTATTGTCCA+AGG + chr1_3:71545109-71545128 None:intergenic 35.0%
ATATCTAACCAAGGCTAAAG+GGG + chr1_3:71545194-71545213 None:intergenic 35.0%
GATATCTAACCAAGGCTAAA+GGG + chr1_3:71545195-71545214 None:intergenic 35.0%
! GTCTTTAGTTCAGTACGTAA+AGG + chr1_3:71545248-71545267 None:intergenic 35.0%
CGTACTGAACTAAAGACAAA+AGG - chr1_3:71545251-71545270 Msa0138500:intron 35.0%
! TAGCACAGTCAAAGTATTCA+AGG - chr1_3:71545312-71545331 Msa0138500:intron 35.0%
AATTCATTAGCTGACCGATA+GGG - chr1_3:71545343-71545362 Msa0138500:intron 35.0%
!! GTTTAGCTCGTCTCTAATTT+TGG - chr1_3:71545385-71545404 Msa0138500:intron 35.0%
! GACTTGTTTCATTCACTCTT+AGG - chr1_3:71545684-71545703 Msa0138500:intron 35.0%
TTAGGCCCTTCATATTAAGA+AGG - chr1_3:71545710-71545729 Msa0138500:intron 35.0%
AGGTGGAAAAATTTCTTCCT+GGG - chr1_3:71545743-71545762 Msa0138500:intron 35.0%
TATCAACAAGTTACTGACGT+AGG - chr1_3:71545817-71545836 Msa0138500:intron 35.0%
!!! GTTTTGAAAACTAACCACCA+AGG + chr1_3:71546003-71546022 None:intergenic 35.0%
TCAACGAAAACTGAAGAAAG+AGG - chr1_3:71546712-71546731 Msa0138500:CDS 35.0%
TTATGTTTCTCTTAAGCACC+CGG - chr1_3:71546776-71546795 Msa0138500:CDS 35.0%
ACATCGCATTGGACAAAAAA+AGG - chr1_3:71546897-71546916 Msa0138500:intron 35.0%
TGGACAAAAAAAGGAAGTTC+GGG - chr1_3:71546906-71546925 Msa0138500:intron 35.0%
! CTTTTCAATACAACTTCGAC+AGG - chr1_3:71547024-71547043 Msa0138500:intron 35.0%
! AACTGTTGATAGATATCACC+AGG + chr1_3:71547076-71547095 None:intergenic 35.0%
GTTTGAACTGAGAAAAAGTG+AGG + chr1_3:71547315-71547334 None:intergenic 35.0%
CAGTTCAAACAAATCAAAGG+CGG - chr1_3:71547325-71547344 Msa0138500:intron 35.0%
AGTTCAAACAAATCAAAGGC+GGG - chr1_3:71547326-71547345 Msa0138500:intron 35.0%
!!! ATTTTGGCTGTTCGAGAAAA+TGG - chr1_3:71547595-71547614 Msa0138500:intron 35.0%
GGTGTATGCTCCAATTAAAA+AGG - chr1_3:71547685-71547704 Msa0138500:intron 35.0%
! GCCTTGTCATCCTTTTTAAT+TGG + chr1_3:71547698-71547717 None:intergenic 35.0%
ATACATTGAGTGAGCTACAA+TGG - chr1_3:71547777-71547796 Msa0138500:intron 35.0%
ATGTCAAAGCTTTCAGCTAA+AGG - chr1_3:71547827-71547846 Msa0138500:intron 35.0%
TGTCAAAGCTTTCAGCTAAA+GGG - chr1_3:71547828-71547847 Msa0138500:intron 35.0%
! ATGAAAGCATATTACAGTCG+AGG - chr1_3:71547921-71547940 Msa0138500:intron 35.0%
! TGAAAGCATATTACAGTCGA+GGG - chr1_3:71547922-71547941 Msa0138500:intron 35.0%
!!! CAAGTTCTGTCATTTTCTGT+AGG + chr1_3:71547959-71547978 None:intergenic 35.0%
CTACAGAAAATGACAGAACT+TGG - chr1_3:71547957-71547976 Msa0138500:intron 35.0%
! TTCTGGAAATTTGTTCCTTC+AGG + chr1_3:71548025-71548044 None:intergenic 35.0%
TGAATATTCCAGGAGAAAAC+AGG + chr1_3:71548088-71548107 None:intergenic 35.0%
TGAATTATGTCCTCTACTCT+CGG + chr1_3:71548152-71548171 None:intergenic 35.0%
ATTCAAATGGAAGAGCAAAC+TGG - chr1_3:71548167-71548186 Msa0138500:exon 35.0%
TCAATAGTTGTGGGAAATTC+TGG + chr1_3:71548225-71548244 None:intergenic 35.0%
ACTTCACGTTCAATAGTTGT+GGG + chr1_3:71548234-71548253 None:intergenic 35.0%
AACTTCACGTTCAATAGTTG+TGG + chr1_3:71548235-71548254 None:intergenic 35.0%
!!! GAAGGGTTTAGTTTTGTCTC+TGG - chr1_3:71540010-71540029 Msa0138500:three_prime_UTR 40.0%
! GAGAGCAGAAATGAGTGTTT+TGG + chr1_3:71540213-71540232 None:intergenic 40.0%
GAGACGATAGATGGAAGAAA+CGG + chr1_3:71540282-71540301 None:intergenic 40.0%
! ATTGCTGTTGAGACGATAGA+TGG + chr1_3:71540291-71540310 None:intergenic 40.0%
! ATGTGCATCAGGTTTCAAGT+TGG - chr1_3:71540885-71540904 Msa0138500:intron 40.0%
!! TTTCAAGTTGGAGGAAGCAA+GGG - chr1_3:71540897-71540916 Msa0138500:intron 40.0%
GCCGTCATCAAAATCAGATT+CGG - chr1_3:71540923-71540942 Msa0138500:intron 40.0%
!! GCCGAATCTGATTTTGATGA+CGG + chr1_3:71540927-71540946 None:intergenic 40.0%
! CATCGGTTAAATGAGCTTCA+AGG - chr1_3:71540946-71540965 Msa0138500:intron 40.0%
AAGTGCCTGCTTGAACTTTA+TGG - chr1_3:71541139-71541158 Msa0138500:intron 40.0%
TCAGTCCATAAAGTTCAAGC+AGG + chr1_3:71541147-71541166 None:intergenic 40.0%
! GCTTGAACTTTATGGACTGA+AGG - chr1_3:71541147-71541166 Msa0138500:intron 40.0%
GACAAGAAACATGTCCTTGT+TGG - chr1_3:71541412-71541431 Msa0138500:CDS 40.0%
!! CTGATGTGAGTTCTGAATAC+TGG - chr1_3:71541484-71541503 Msa0138500:CDS 40.0%
TTGAATGTGCATATCCTGAC+CGG - chr1_3:71541514-71541533 Msa0138500:CDS 40.0%
CAATCAAACAATTTCCGGTC+AGG + chr1_3:71541531-71541550 None:intergenic 40.0%
CTGACCGGAAATTGTTTGAT+TGG - chr1_3:71541529-71541548 Msa0138500:CDS 40.0%
GACCGGAAATTGTTTGATTG+GGG - chr1_3:71541531-71541550 Msa0138500:CDS 40.0%
TGCCCCAATCAAACAATTTC+CGG + chr1_3:71541536-71541555 None:intergenic 40.0%
! AGATTACGCCGTCCATTTTA+TGG - chr1_3:71541561-71541580 Msa0138500:CDS 40.0%
CTCCAACTCCATAAAATGGA+CGG + chr1_3:71541572-71541591 None:intergenic 40.0%
GGATCTCCAACTCCATAAAA+TGG + chr1_3:71541576-71541595 None:intergenic 40.0%
TTATCAGCATCCATGGCAAA+TGG + chr1_3:71541597-71541616 None:intergenic 40.0%
AGTTCAAACCCAAAACTTGG+GGG + chr1_3:71541697-71541716 None:intergenic 40.0%
GCAAGTTCAAACCCAAAACT+TGG + chr1_3:71541700-71541719 None:intergenic 40.0%
GTTCACGTCTATAGATGTTC+AGG - chr1_3:71541749-71541768 Msa0138500:CDS 40.0%
AGTGTCTGGTTGAAAAACAC+AGG - chr1_3:71541963-71541982 Msa0138500:intron 40.0%
CAGGATCTATATGAGATAGG+CGG + chr1_3:71542162-71542181 None:intergenic 40.0%
GAGACTGTCAAGATTAGAAG+AGG - chr1_3:71542189-71542208 Msa0138500:intron 40.0%
ACTGTCAAGATTAGAAGAGG+TGG - chr1_3:71542192-71542211 Msa0138500:intron 40.0%
!! AAAGATAGAGGAAGAGTACC+TGG + chr1_3:71542339-71542358 None:intergenic 40.0%
CCTCATCACATGTTCATGAT+AGG + chr1_3:71542565-71542584 None:intergenic 40.0%
CCTATCATGAACATGTGATG+AGG - chr1_3:71542562-71542581 Msa0138500:CDS 40.0%
GAGATCTCAAAGAGGAAACA+AGG - chr1_3:71542598-71542617 Msa0138500:CDS 40.0%
! CGAACACTCAAATCAAGTTG+TGG - chr1_3:71542628-71542647 Msa0138500:intron 40.0%
AAGGGGAAGATGTTAGGAAA+TGG - chr1_3:71542691-71542710 Msa0138500:intron 40.0%
GTAATGGTTAATGCTGGTAC+TGG - chr1_3:71543082-71543101 Msa0138500:intron 40.0%
TAACTGTCCAGGAATGAAAG+AGG + chr1_3:71543189-71543208 None:intergenic 40.0%
! TAATTTTTGCAGGCATGGCA+TGG - chr1_3:71543296-71543315 Msa0138500:CDS 40.0%
ATTGAGATTCCAAGCCTTGA+AGG - chr1_3:71543352-71543371 Msa0138500:CDS 40.0%
TGACTCAGGTAAATCAGCTT+CGG + chr1_3:71543540-71543559 None:intergenic 40.0%
!! TTCTTTGAAGCATCTGACTC+AGG + chr1_3:71543554-71543573 None:intergenic 40.0%
GAGTCAGATGCTTCAAAGAA+TGG - chr1_3:71543554-71543573 Msa0138500:intron 40.0%
GCATCTATATCATCATCACC+AGG + chr1_3:71543596-71543615 None:intergenic 40.0%
ACAGCTGTAATGGCAAATTG+CGG + chr1_3:71543770-71543789 None:intergenic 40.0%
TCTATCCCAAACAGCTGTAA+TGG + chr1_3:71543780-71543799 None:intergenic 40.0%
TTCCTTTACCGATATGGTGA+AGG - chr1_3:71544259-71544278 Msa0138500:intron 40.0%
ATCCTTCACCATATCGGTAA+AGG + chr1_3:71544264-71544283 None:intergenic 40.0%
CTGTCAATCCTTCACCATAT+CGG + chr1_3:71544270-71544289 None:intergenic 40.0%
TCTCCACCTTGAAGTATAGA+CGG + chr1_3:71544516-71544535 None:intergenic 40.0%
!!! TGGGATTTTGGCTGATGAAA+TGG - chr1_3:71544599-71544618 Msa0138500:intron 40.0%
!!! GGGATTTTGGCTGATGAAAT+GGG - chr1_3:71544600-71544619 Msa0138500:intron 40.0%
!!! GGATTTTGGCTGATGAAATG+GGG - chr1_3:71544601-71544620 Msa0138500:intron 40.0%
! TTCGAATACAAAGGTGTGTC+TGG - chr1_3:71544666-71544685 Msa0138500:CDS 40.0%
! TTTGGAGCAACAATCAAGTG+GGG + chr1_3:71544693-71544712 None:intergenic 40.0%
!! CTTTGGAGCAACAATCAAGT+GGG + chr1_3:71544694-71544713 None:intergenic 40.0%
GGATCATTGAATTCTCAACG+TGG - chr1_3:71544730-71544749 Msa0138500:CDS 40.0%
!! ATTTCTGGCTAGACATACCT+AGG + chr1_3:71544759-71544778 None:intergenic 40.0%
TTTCTTTCCTGATCTCCTTG+TGG - chr1_3:71544788-71544807 Msa0138500:CDS 40.0%
TTCTTTCCTGATCTCCTTGT+GGG - chr1_3:71544789-71544808 Msa0138500:CDS 40.0%
AAAGGAGGAATATTCAGGAG+AGG - chr1_3:71544948-71544967 Msa0138500:CDS 40.0%
AAGGAGGAATATTCAGGAGA+GGG - chr1_3:71544949-71544968 Msa0138500:CDS 40.0%
GTCTGTTCTAGCAAAAACCT+TGG - chr1_3:71545089-71545108 Msa0138500:intron 40.0%
GATTAATTCCCCTTTAGCCT+TGG - chr1_3:71545183-71545202 Msa0138500:intron 40.0%
GGATATCTAACCAAGGCTAA+AGG + chr1_3:71545196-71545215 None:intergenic 40.0%
!! AAAAGGCGATGAAAGTACTG+TGG - chr1_3:71545268-71545287 Msa0138500:intron 40.0%
!! AAAGGCGATGAAAGTACTGT+GGG - chr1_3:71545269-71545288 Msa0138500:intron 40.0%
TACTTTGACTGTGCTATGCA+AGG + chr1_3:71545308-71545327 None:intergenic 40.0%
CAATTCATTAGCTGACCGAT+AGG - chr1_3:71545342-71545361 Msa0138500:intron 40.0%
GAAAGGTAATACCACCCTAT+CGG + chr1_3:71545360-71545379 None:intergenic 40.0%
CAGTCAACAAAAGTCTTCGT+TGG + chr1_3:71545437-71545456 None:intergenic 40.0%
! CAACGAAGACTTTTGTTGAC+TGG - chr1_3:71545435-71545454 Msa0138500:intron 40.0%
! CTGCAAACTGTTCTGAATTG+GGG + chr1_3:71545463-71545482 None:intergenic 40.0%
! CCTGCAAACTGTTCTGAATT+GGG + chr1_3:71545464-71545483 None:intergenic 40.0%
! TCCTGCAAACTGTTCTGAAT+TGG + chr1_3:71545465-71545484 None:intergenic 40.0%
AGAACAGTTTGCAGGAATTG+TGG - chr1_3:71545469-71545488 Msa0138500:intron 40.0%
TGAACGGAGTTGAAAATGCT+TGG + chr1_3:71545516-71545535 None:intergenic 40.0%
CAACTCCGTTCAAAATTTCG+AGG - chr1_3:71545524-71545543 Msa0138500:intron 40.0%
! CCAGTCCTCGAAATTTTGAA+CGG + chr1_3:71545532-71545551 None:intergenic 40.0%
CTGATAGAGAGACATCAACT+CGG + chr1_3:71545575-71545594 None:intergenic 40.0%
GAGGTGGAAAAATTTCTTCC+TGG - chr1_3:71545742-71545761 Msa0138500:intron 40.0%
ATTTCTTCCTGGGAAATCTC+AGG - chr1_3:71545753-71545772 Msa0138500:intron 40.0%
TCAAATGTGATATGTCAGCC+TGG - chr1_3:71545782-71545801 Msa0138500:intron 40.0%
TTGCAATCTACTTGTTCCCT+TGG - chr1_3:71545983-71546002 Msa0138500:intron 40.0%
TAACCATCCTTACCTCTTTG+TGG - chr1_3:71546495-71546514 Msa0138500:intron 40.0%
AACCATCCTTACCTCTTTGT+GGG - chr1_3:71546496-71546515 Msa0138500:intron 40.0%
TATCATAGTCTCCCACAAAG+AGG + chr1_3:71546510-71546529 None:intergenic 40.0%
TTTGTGAGAAAAGGAGGACT+CGG + chr1_3:71546621-71546640 None:intergenic 40.0%
GAGTCATTTGTGAGAAAAGG+AGG + chr1_3:71546627-71546646 None:intergenic 40.0%
GTCGAGTCATTTGTGAGAAA+AGG + chr1_3:71546630-71546649 None:intergenic 40.0%
AACATAAAGTATGGGGAGTC+AGG + chr1_3:71546763-71546782 None:intergenic 40.0%
TATGTTTCTCTTAAGCACCC+GGG - chr1_3:71546777-71546796 Msa0138500:CDS 40.0%
!!! GTTTTCGTGTTGGTTAGTGT+GGG - chr1_3:71546928-71546947 Msa0138500:intron 40.0%
!!! TTTTCGTGTTGGTTAGTGTG+GGG - chr1_3:71546929-71546948 Msa0138500:intron 40.0%
TATTGACGCGAAAGTCATTC+AGG - chr1_3:71546996-71547015 Msa0138500:intron 40.0%
TAGTTTCTGTGAGGAGAACT+TGG + chr1_3:71547251-71547270 None:intergenic 40.0%
GTTCAAACAAATCAAAGGCG+GGG - chr1_3:71547327-71547346 Msa0138500:intron 40.0%
CAACATTTCTCTTCTGTCCT+GGG + chr1_3:71547483-71547502 None:intergenic 40.0%
! CTCGATCAGATGAGGAATTT+TGG - chr1_3:71547579-71547598 Msa0138500:intron 40.0%
AAACTACAGATCACGTCTCA+TGG - chr1_3:71547640-71547659 Msa0138500:intron 40.0%
! AAGAGCATGAATTGCCAGAT+TGG - chr1_3:71547663-71547682 Msa0138500:intron 40.0%
AGAGCATGAATTGCCAGATT+GGG - chr1_3:71547664-71547683 Msa0138500:intron 40.0%
AAGGCCAAAGATTTCAACAG+CGG - chr1_3:71547713-71547732 Msa0138500:intron 40.0%
CACAAGCCAGTGATAATACA+GGG - chr1_3:71547894-71547913 Msa0138500:intron 40.0%
ACAAGCCAGTGATAATACAG+GGG - chr1_3:71547895-71547914 Msa0138500:intron 40.0%
TTCAGGCTTGAATCTCTTTG+AGG + chr1_3:71548008-71548027 None:intergenic 40.0%
TCAAAGAGATTCAAGCCTGA+AGG - chr1_3:71548007-71548026 Msa0138500:intron 40.0%
AAGAAGAGATCAAGCCATCT+TGG - chr1_3:71548112-71548131 Msa0138500:CDS 40.0%
TCCATTGATATGGCGCGTAA+CGG + chr1_3:71540161-71540180 None:intergenic 45.0%
! TTGTGAATCTAGGGCGATGT+AGG - chr1_3:71540802-71540821 Msa0138500:CDS 45.0%
! TGTGAATCTAGGGCGATGTA+GGG - chr1_3:71540803-71540822 Msa0138500:CDS 45.0%
!! TGCATCAGGTTTCAAGTTGG+AGG - chr1_3:71540888-71540907 Msa0138500:intron 45.0%
!! GTTTCAAGTTGGAGGAAGCA+AGG - chr1_3:71540896-71540915 Msa0138500:intron 45.0%
AACCAGAATTGCCTTCAAGC+AGG - chr1_3:71541098-71541117 Msa0138500:intron 45.0%
ACCAGAATTGCCTTCAAGCA+GGG - chr1_3:71541099-71541118 Msa0138500:intron 45.0%
!! TATGTGGGATGGACTACAAC+AGG + chr1_3:71541265-71541284 None:intergenic 45.0%
TTGTAGTCCATCCCACATAG+TGG - chr1_3:71541266-71541285 Msa0138500:intron 45.0%
TGTAGTCCATCCCACATAGT+GGG - chr1_3:71541267-71541286 Msa0138500:intron 45.0%
GAAACATGTCCTTGTTGGCA+AGG - chr1_3:71541417-71541436 Msa0138500:CDS 45.0%
AAGAGAAGTCCTTGCCAACA+AGG + chr1_3:71541429-71541448 None:intergenic 45.0%
GTTGGCAAGGACTTCTCTTA+TGG - chr1_3:71541430-71541449 Msa0138500:CDS 45.0%
AGTTGGAGATCCATTTGCCA+TGG - chr1_3:71541584-71541603 Msa0138500:CDS 45.0%
TTCAAACCCAAAACTTGGGG+GGG + chr1_3:71541695-71541714 None:intergenic 45.0%
GTTCAAACCCAAAACTTGGG+GGG + chr1_3:71541696-71541715 None:intergenic 45.0%
CTTGACAGTCTCTGCATTTC+AGG + chr1_3:71542181-71542200 None:intergenic 45.0%
!! CTTTGAAGCGGAGAAAACAG+AGG - chr1_3:71542302-71542321 Msa0138500:intron 45.0%
CGGAGAAAACAGAGGAATGA+TGG - chr1_3:71542310-71542329 Msa0138500:intron 45.0%
ACAGAGGAATGATGGTATCC+AGG - chr1_3:71542318-71542337 Msa0138500:intron 45.0%
GCATGGAAGGCAAAGACAAA+GGG - chr1_3:71543313-71543332 Msa0138500:CDS 45.0%
GAATCTCAATTTCTCTGCCC+GGG + chr1_3:71543342-71543361 None:intergenic 45.0%
GGAATCTCAATTTCTCTGCC+CGG + chr1_3:71543343-71543362 None:intergenic 45.0%
TTCTTGATCATCGGCCTTCA+AGG + chr1_3:71543369-71543388 None:intergenic 45.0%
AGCAGCTGTTCAACGTCAAA+AGG - chr1_3:71543475-71543494 Msa0138500:intron 45.0%
! TTCAGATGGCATTGAACCCT+TGG - chr1_3:71543508-71543527 Msa0138500:intron 45.0%
TCAGCTTCGGAATCTTCCAA+GGG + chr1_3:71543527-71543546 None:intergenic 45.0%
ATCAGCTTCGGAATCTTCCA+AGG + chr1_3:71543528-71543547 None:intergenic 45.0%
TGGGGTTTCCTTTACCGATA+TGG - chr1_3:71544253-71544272 Msa0138500:intron 45.0%
GAGCAACCGTCTATACTTCA+AGG - chr1_3:71544507-71544526 Msa0138500:intron 45.0%
CAACCGTCTATACTTCAAGG+TGG - chr1_3:71544510-71544529 Msa0138500:intron 45.0%
!! CCTTTGGAGCAACAATCAAG+TGG + chr1_3:71544695-71544714 None:intergenic 45.0%
CCACTTGATTGTTGCTCCAA+AGG - chr1_3:71544692-71544711 Msa0138500:CDS 45.0%
TCTTTCCTGATCTCCTTGTG+GGG - chr1_3:71544790-71544809 Msa0138500:CDS 45.0%
ATGTGCACAGTTGACAGAGA+TGG + chr1_3:71544836-71544855 None:intergenic 45.0%
AGGAGGAATATTCAGGAGAG+GGG - chr1_3:71544950-71544969 Msa0138500:CDS 45.0%
GGGTGGTATTACCTTTCAGA+TGG - chr1_3:71545363-71545382 Msa0138500:intron 45.0%
GACGAGCTAAACCATCTGAA+AGG + chr1_3:71545377-71545396 None:intergenic 45.0%
CCCAATTCAGAACAGTTTGC+AGG - chr1_3:71545461-71545480 Msa0138500:intron 45.0%
CCGTTCAAAATTTCGAGGAC+TGG - chr1_3:71545529-71545548 Msa0138500:intron 45.0%
ACATCAACTCGGTCTGCAAA+GGG + chr1_3:71545564-71545583 None:intergenic 45.0%
AGTATGACCTGAGATTTCCC+AGG + chr1_3:71545763-71545782 None:intergenic 45.0%
TGATATGTCAGCCTGGCAAA+AGG - chr1_3:71545789-71545808 Msa0138500:intron 45.0%
CAATCTACTTGTTCCCTTGG+TGG - chr1_3:71545986-71546005 Msa0138500:intron 45.0%
TAGTCTCCCACAAAGAGGTA+AGG + chr1_3:71546505-71546524 None:intergenic 45.0%
!!! TGCGAAGTTTTGGGAGCAAA+CGG + chr1_3:71546588-71546607 None:intergenic 45.0%
CTCACAAATGACTCGACTCA+TGG - chr1_3:71546633-71546652 Msa0138500:intron 45.0%
CAGTGATTGGAACCCACAAA+TGG - chr1_3:71546852-71546871 Msa0138500:CDS 45.0%
!! CGGCTTGTTGATCCATTTGT+GGG + chr1_3:71546867-71546886 None:intergenic 45.0%
!! TCGGCTTGTTGATCCATTTG+TGG + chr1_3:71546868-71546887 None:intergenic 45.0%
ACAAATGGATCAACAAGCCG+AGG - chr1_3:71546867-71546886 Msa0138500:CDS 45.0%
TTTGTCCAATGCGATGTGCT+CGG + chr1_3:71546894-71546913 None:intergenic 45.0%
!!! GGTTTTCGTGTTGGTTAGTG+TGG - chr1_3:71546927-71546946 Msa0138500:intron 45.0%
AGAGCGTGCGAAACAAAAGA+TGG - chr1_3:71546972-71546991 Msa0138500:intron 45.0%
GAGCGTGCGAAACAAAAGAT+GGG - chr1_3:71546973-71546992 Msa0138500:intron 45.0%
TTCGACAGGTCTGTAGTTCT+TGG - chr1_3:71547038-71547057 Msa0138500:intron 45.0%
!! TCTTGGTGCTTGCTATATCC+TGG - chr1_3:71547055-71547074 Msa0138500:intron 45.0%
! TGTTCTTATTTGTGCAGCCC+AGG - chr1_3:71547463-71547482 Msa0138500:CDS 45.0%
CCAACATTTCTCTTCTGTCC+TGG + chr1_3:71547484-71547503 None:intergenic 45.0%
CCAGGACAGAAGAGAAATGT+TGG - chr1_3:71547481-71547500 Msa0138500:CDS 45.0%
GGACAGAAGAGAAATGTTGG+AGG - chr1_3:71547484-71547503 Msa0138500:CDS 45.0%
CGGTTAATTTCTCTCTCGCT+AGG + chr1_3:71547551-71547570 None:intergenic 45.0%
GGACGAAGAGAGAAGACAAA+AGG - chr1_3:71547616-71547635 Msa0138500:intron 45.0%
ATTGGAGCATACACCCAATC+TGG + chr1_3:71547680-71547699 None:intergenic 45.0%
AACGCCGCTGTTGAAATCTT+TGG + chr1_3:71547720-71547739 None:intergenic 45.0%
GCACAAGCCAGTGATAATAC+AGG - chr1_3:71547893-71547912 Msa0138500:intron 45.0%
ATCTGCCCCTGTATTATCAC+TGG + chr1_3:71547903-71547922 None:intergenic 45.0%
! TCTTTGAGGAAGGAGTGACA+TGG + chr1_3:71547994-71548013 None:intergenic 45.0%
! GGCTTGAATCTCTTTGAGGA+AGG + chr1_3:71548004-71548023 None:intergenic 45.0%
TTTCCAGAAACATGCACACG+AGG - chr1_3:71548036-71548055 Msa0138500:CDS 45.0%
TATTCCAGGAGAAAACAGGC+TGG + chr1_3:71548084-71548103 None:intergenic 45.0%
AGATCAAGCCATCTTGGTCA+GGG - chr1_3:71548118-71548137 Msa0138500:CDS 45.0%
ACGTTGTGAGCGTGAGATCA+AGG - chr1_3:71540084-71540103 Msa0138500:three_prime_UTR 50.0%
ACCGTTACGCGCCATATCAA+TGG - chr1_3:71540157-71540176 Msa0138500:CDS 50.0%
TCGAGGAGATGAGAAGGAAG+AGG + chr1_3:71540257-71540276 None:intergenic 50.0%
AGATGGAAGAAACGGAGTCG+AGG + chr1_3:71540274-71540293 None:intergenic 50.0%
CAACGTCCGAAATGTGCATC+AGG - chr1_3:71540874-71540893 Msa0138500:intron 50.0%
CCAGAATTGCCTTCAAGCAG+GGG - chr1_3:71541100-71541119 Msa0138500:intron 50.0%
CAAGCCTCTTCCCACTATGT+GGG + chr1_3:71541280-71541299 None:intergenic 50.0%
TCAAGCCTCTTCCCACTATG+TGG + chr1_3:71541281-71541300 None:intergenic 50.0%
GTTAGCAGAGTTGCAGTCGA+AGG - chr1_3:71541455-71541474 Msa0138500:CDS 50.0%
CAGAGTTGCAGTCGAAGGTT+CGG - chr1_3:71541460-71541479 Msa0138500:CDS 50.0%
! CGCCGTCCATTTTATGGAGT+TGG - chr1_3:71541567-71541586 Msa0138500:CDS 50.0%
TCAAACCCAAAACTTGGGGG+GGG + chr1_3:71541694-71541713 None:intergenic 50.0%
GACTTTGTAACTGGAGCTCG+CGG + chr1_3:71542276-71542295 None:intergenic 50.0%
GACAGTGCCTCTTTCATTCC+TGG - chr1_3:71543179-71543198 Msa0138500:intron 50.0%
! TTTTGCAGGCATGGCATGGA+AGG - chr1_3:71543300-71543319 Msa0138500:CDS 50.0%
GGCATGGAAGGCAAAGACAA+AGG - chr1_3:71543312-71543331 Msa0138500:CDS 50.0%
! ACCTAAGGGCCCGTTTGTTA+CGG + chr1_3:71544192-71544211 None:intergenic 50.0%
CAAACGGGCCCTTAGGTATT+TGG - chr1_3:71544195-71544214 Msa0138500:intron 50.0%
ATCAGATAGAGGGGCTCCAA+TGG - chr1_3:71544547-71544566 Msa0138500:intron 50.0%
TTGGCTGATGAAATGGGGCT+TGG - chr1_3:71544606-71544625 Msa0138500:intron 50.0%
TGGCTGATGAAATGGGGCTT+GGG - chr1_3:71544607-71544626 Msa0138500:intron 50.0%
CAGTTTGGCAGAACTGCCTT+TGG + chr1_3:71544711-71544730 None:intergenic 50.0%
CAAAGGCAGTTCTGCCAAAC+TGG - chr1_3:71544709-71544728 Msa0138500:CDS 50.0%
AATTCTCAACGTGGGCTCCT+AGG - chr1_3:71544739-71544758 Msa0138500:CDS 50.0%
TTCTATACCCTCTCCCCACA+AGG + chr1_3:71544806-71544825 None:intergenic 50.0%
TCATTAGCTGACCGATAGGG+TGG - chr1_3:71545346-71545365 Msa0138500:intron 50.0%
ATCAACTCGGTCTGCAAAGG+GGG + chr1_3:71545562-71545581 None:intergenic 50.0%
CATCAACTCGGTCTGCAAAG+GGG + chr1_3:71545563-71545582 None:intergenic 50.0%
GACATCAACTCGGTCTGCAA+AGG + chr1_3:71545565-71545584 None:intergenic 50.0%
GTTACTGACGTAGGCAGAGT+TGG - chr1_3:71545826-71545845 Msa0138500:intron 50.0%
! TGACGTAGGCAGAGTTGGTT+TGG - chr1_3:71545831-71545850 Msa0138500:intron 50.0%
!! GGCAGAGTTGGTTTGGACAA+CGG - chr1_3:71545838-71545857 Msa0138500:intron 50.0%
CTCCCACAAAGAGGTAAGGA+TGG + chr1_3:71546501-71546520 None:intergenic 50.0%
! GAGGAGATTGTCAGAGCATC+AGG - chr1_3:71546544-71546563 Msa0138500:intron 50.0%
! GACCAGCTCTGCGAAGTTTT+GGG + chr1_3:71546597-71546616 None:intergenic 50.0%
! TGACCAGCTCTGCGAAGTTT+TGG + chr1_3:71546598-71546617 None:intergenic 50.0%
!! GGAAGTTCGGGTTTTCGTGT+TGG - chr1_3:71546918-71546937 Msa0138500:intron 50.0%
TAGTGTGGGGTCAGTTGAAG+AGG - chr1_3:71546942-71546961 Msa0138500:intron 50.0%
TTGGAGGTGATTATGCGTCG+AGG - chr1_3:71547500-71547519 Msa0138500:CDS 50.0%
GTCGAGGTTCAAGCTCACTT+GGG - chr1_3:71547516-71547535 Msa0138500:intron 50.0%
TCGAGGTTCAAGCTCACTTG+GGG - chr1_3:71547517-71547536 Msa0138500:intron 50.0%
GATTTCAACAGCGGCGTTAC+TGG - chr1_3:71547722-71547741 Msa0138500:intron 50.0%
GAGTGAGCTACAATGGATGC+AGG - chr1_3:71547784-71547803 Msa0138500:intron 50.0%
GCTACAATGGATGCAGGCTA+TGG - chr1_3:71547790-71547809 Msa0138500:intron 50.0%
TGGATGCAGGCTATGGAGAA+TGG - chr1_3:71547797-71547816 Msa0138500:intron 50.0%
ATGCAGGCTATGGAGAATGG+TGG - chr1_3:71547800-71547819 Msa0138500:intron 50.0%
TGCAGGCTATGGAGAATGGT+GGG - chr1_3:71547801-71547820 Msa0138500:intron 50.0%
CTATGCTGTCAGATGAGAGG+TGG + chr1_3:71547874-71547893 None:intergenic 50.0%
GTGCTATGCTGTCAGATGAG+AGG + chr1_3:71547877-71547896 None:intergenic 50.0%
CATCCTCGTGTGCATGTTTC+TGG + chr1_3:71548042-71548061 None:intergenic 50.0%
GGATGTCAGTGGAAGTGGAT+TGG - chr1_3:71548057-71548076 Msa0138500:CDS 50.0%
GAGATCAAGCCATCTTGGTC+AGG - chr1_3:71548117-71548136 Msa0138500:CDS 50.0%
ATGCTGAACCCTGACCAAGA+TGG + chr1_3:71548129-71548148 None:intergenic 50.0%
ACGGAGTCGAGGAGATGAGA+AGG + chr1_3:71540263-71540282 None:intergenic 55.0%
TAGGGCGATGTAGGGAGTTC+TGG - chr1_3:71540811-71540830 Msa0138500:CDS 55.0%
CCCCTGCTTGAAGGCAATTC+TGG + chr1_3:71541103-71541122 None:intergenic 55.0%
ATTGCCTTCAAGCAGGGGAG+AGG - chr1_3:71541105-71541124 Msa0138500:intron 55.0%
CAAGCAGGCACTTTGTCTGC+AGG + chr1_3:71541132-71541151 None:intergenic 55.0%
CCTCTTCCCACTATGTGGGA+TGG + chr1_3:71541276-71541295 None:intergenic 55.0%
! CCATCCCACATAGTGGGAAG+AGG - chr1_3:71541273-71541292 Msa0138500:intron 55.0%
GAGGAAGAGACGGGATTCTG+AGG - chr1_3:71541623-71541642 Msa0138500:CDS 55.0%
AAACCCAAAACTTGGGGGGG+GGG + chr1_3:71541692-71541711 None:intergenic 55.0%
CAAACCCAAAACTTGGGGGG+GGG + chr1_3:71541693-71541712 None:intergenic 55.0%
GGCAAAGACAAAGGGCAACC+CGG - chr1_3:71543321-71543340 Msa0138500:CDS 55.0%
GCAAAGACAAAGGGCAACCC+GGG - chr1_3:71543322-71543341 Msa0138500:CDS 55.0%
GATCATCGGCCTTCAAGGCT+TGG + chr1_3:71543364-71543383 None:intergenic 55.0%
TCCGTAACAAACGGGCCCTT+AGG - chr1_3:71544188-71544207 Msa0138500:intron 55.0%
CTGATCTCCTTGTGGGGAGA+GGG - chr1_3:71544796-71544815 Msa0138500:CDS 55.0%
CTCCCAAAACTTCGCAGAGC+TGG - chr1_3:71546592-71546611 Msa0138500:intron 55.0%
TTTCTCTTAAGCACCCGGGC+AGG - chr1_3:71546781-71546800 Msa0138500:CDS 55.0%
AATGCGATGTGCTCGGTCCT+CGG + chr1_3:71546887-71546906 None:intergenic 55.0%
GACGCGAAAGTCATTCAGGC+AGG - chr1_3:71547000-71547019 Msa0138500:intron 55.0%
GGTGGACCCGCACATTACAA+TGG + chr1_3:71547387-71547406 None:intergenic 55.0%
AATGTGCGGGTCCACCATGT+CGG - chr1_3:71547391-71547410 Msa0138500:CDS 55.0%
!! TGACCTAAGGAGCACCGACA+TGG + chr1_3:71547408-71547427 None:intergenic 55.0%
CGTCGAGGTTCAAGCTCACT+TGG - chr1_3:71547515-71547534 Msa0138500:intron 55.0%
CATCTGATCGAGCAGCAAGG+CGG + chr1_3:71547571-71547590 None:intergenic 55.0%
CCTCATCTGATCGAGCAGCA+AGG + chr1_3:71547574-71547593 None:intergenic 55.0%
CCTTGCTGCTCGATCAGATG+AGG - chr1_3:71547571-71547590 Msa0138500:intron 55.0%
ACAGCGGCGTTACTGGAAAG+CGG - chr1_3:71547729-71547748 Msa0138500:intron 55.0%
GCAGGCTATGGAGAATGGTG+GGG - chr1_3:71547802-71547821 Msa0138500:intron 55.0%
CATGCACACGAGGATGTCAG+TGG - chr1_3:71548046-71548065 Msa0138500:CDS 55.0%
CACGAGGATGTCAGTGGAAG+TGG - chr1_3:71548052-71548071 Msa0138500:CDS 55.0%
! TGGACCAGCCTGTTTTCTCC+TGG - chr1_3:71548077-71548096 Msa0138500:CDS 55.0%
GGTTCAGCATCCGAGAGTAG+AGG - chr1_3:71548139-71548158 Msa0138500:CDS 55.0%
AGGTCCTCTCCCCTGCTTGA+AGG + chr1_3:71541112-71541131 None:intergenic 60.0%
AACCCAAAACTTGGGGGGGG+GGG + chr1_3:71541691-71541710 None:intergenic 60.0%
CCTCTCCCCACAAGGAGATC+AGG + chr1_3:71544798-71544817 None:intergenic 60.0%
CCTGATCTCCTTGTGGGGAG+AGG - chr1_3:71544795-71544814 Msa0138500:CDS 60.0%
TCAAACCAAGACCGCCTGCC+CGG + chr1_3:71546798-71546817 None:intergenic 60.0%
GAGGACCGAGCACATCGCAT+TGG - chr1_3:71546886-71546905 Msa0138500:intron 60.0%
!! CCTAAGGAGCACCGACATGG+TGG + chr1_3:71547405-71547424 None:intergenic 60.0%
! CCACCATGTCGGTGCTCCTT+AGG - chr1_3:71547402-71547421 Msa0138500:CDS 60.0%
ACCCAAAACTTGGGGGGGGG+GGG + chr1_3:71541690-71541709 None:intergenic 65.0%
CTCTTAAGCACCCGGGCAGG+CGG - chr1_3:71546784-71546803 Msa0138500:CDS 65.0%
CAAACCAAGACCGCCTGCCC+GGG + chr1_3:71546797-71546816 None:intergenic 65.0%
AAAACTTGGGGGGGGGGGGG+GGG + chr1_3:71541686-71541705 None:intergenic 70.0%
CAAAACTTGGGGGGGGGGGG+GGG + chr1_3:71541687-71541706 None:intergenic 70.0%
CCAAAACTTGGGGGGGGGGG+GGG + chr1_3:71541688-71541707 None:intergenic 70.0%
CCCAAAACTTGGGGGGGGGG+GGG + chr1_3:71541689-71541708 None:intergenic 70.0%
! CCCCCCCCCCCCCAAGTTTT+GGG - chr1_3:71541686-71541705 Msa0138500:CDS 70.0%
AAACTTGGGGGGGGGGGGGG+GGG + chr1_3:71541685-71541704 None:intergenic 75.0%
! CCCCCCCCCCCCCCAAGTTT+TGG - chr1_3:71541685-71541704 Msa0138500:CDS 75.0%
AGCACCCGGGCAGGCGGTCT+TGG - chr1_3:71546790-71546809 Msa0138500:CDS 75.0%
! GGGGGGGGGGGGGGCAATTC+TGG + chr1_3:71541667-71541686 None:intergenic 80.0%
! AACTTGGGGGGGGGGGGGGG+GGG + chr1_3:71541684-71541703 None:intergenic 80.0%
! ACTTGGGGGGGGGGGGGGGG+GGG + chr1_3:71541683-71541702 None:intergenic 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr1_3:71541681-71541700 None:intergenic 90.0%
! CTTGGGGGGGGGGGGGGGGG+GGG + chr1_3:71541682-71541701 None:intergenic 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:71541680-71541699 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 71540010 71548337 71540010 ID=Msa0138500;Name=Msa0138500
chr1_3 mRNA 71540010 71548337 71540010 ID=Msa0138500-mRNA-1;Parent=Msa0138500;Name=Msa0138500-mRNA-1;_AED=0.03;_eAED=0.03;_QI=166|1|1|1|1|1|12|142|1086
chr1_3 exon 71540010 71540867 71540010 ID=Msa0138500-mRNA-1:exon:24849;Parent=Msa0138500-mRNA-1
chr1_3 exon 71541302 71541907 71541302 ID=Msa0138500-mRNA-1:exon:24848;Parent=Msa0138500-mRNA-1
chr1_3 exon 71542488 71542641 71542488 ID=Msa0138500-mRNA-1:exon:24847;Parent=Msa0138500-mRNA-1
chr1_3 exon 71542715 71542922 71542715 ID=Msa0138500-mRNA-1:exon:24846;Parent=Msa0138500-mRNA-1
chr1_3 exon 71543229 71543447 71543229 ID=Msa0138500-mRNA-1:exon:24845;Parent=Msa0138500-mRNA-1
chr1_3 exon 71543587 71543846 71543587 ID=Msa0138500-mRNA-1:exon:24844;Parent=Msa0138500-mRNA-1
chr1_3 exon 71544641 71545039 71544641 ID=Msa0138500-mRNA-1:exon:24843;Parent=Msa0138500-mRNA-1
chr1_3 exon 71546008 71546157 71546008 ID=Msa0138500-mRNA-1:exon:24842;Parent=Msa0138500-mRNA-1
chr1_3 exon 71546703 71546891 71546703 ID=Msa0138500-mRNA-1:exon:24841;Parent=Msa0138500-mRNA-1
chr1_3 exon 71547179 71547243 71547179 ID=Msa0138500-mRNA-1:exon:24840;Parent=Msa0138500-mRNA-1
chr1_3 exon 71547380 71547533 71547380 ID=Msa0138500-mRNA-1:exon:24839;Parent=Msa0138500-mRNA-1
chr1_3 exon 71548031 71548337 71548031 ID=Msa0138500-mRNA-1:exon:24838;Parent=Msa0138500-mRNA-1
chr1_3 five_prime_UTR 71548172 71548337 71548172 ID=Msa0138500-mRNA-1:five_prime_utr;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71548031 71548171 71548031 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71547380 71547533 71547380 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71547179 71547243 71547179 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71546703 71546891 71546703 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71546008 71546157 71546008 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71544641 71545039 71544641 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71543587 71543846 71543587 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71543229 71543447 71543229 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71542715 71542922 71542715 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71542488 71542641 71542488 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71541302 71541907 71541302 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 CDS 71540152 71540867 71540152 ID=Msa0138500-mRNA-1:cds;Parent=Msa0138500-mRNA-1
chr1_3 three_prime_UTR 71540010 71540151 71540010 ID=Msa0138500-mRNA-1:three_prime_utr;Parent=Msa0138500-mRNA-1
Gene Sequence

>Msa0138500

ATGGAAGAAAAGAAAGAAAAGGAACAACAACACACCAAAACACTCATTTCTGCTCTCAACTTTCTCTCTCGCGACGTTCCTCTTCCTTCTCATCTCCTCGACTCCGTTTCTTCCATCTATCGTCTCAACAGCAATGTCAATGGCGATGTAGGGAGTTCTGGAGATGATTTAATAACAGATCTTGAAGATGCATTATCGAAACAACGTCCGAAATGTGCATCAGGTTTCAAGTTGGAGGAAGCAAGGGAAAGCCGTCATCAAAATCAGATTCGGCATCGGTTAAATGAGCTTCAAGAATTGCCTTCAAGCAGGGGAGAGGACCTGCAGACAAAGTGCCTGCTTGAACTTTATGGACTGAAGTTAGCAGAGTTGCAGTCGAAGGTTCGGTCTGATGTGAGTTCTGAATACTGGCTCAATGTTGAATGTGCATATCCTGACCGGAAATTGTTTGATTGGGGCATGATGAGATTACGCCGTCCATTTTATGGAGTTGGAGATCCATTTGCCATGGATGCTGATAATCAATTGAGGAAGAGACGGGATTCTGAGAGACTGTCAAGATTAGAAGAGGTGGAGAAAAATCATATAGAGACTACAAAAAGAAGGTTTTTTGCAGAAATATTAAATTCTGTCCGCGAGCTCCAGTTACAAAGTCAAGCTTCTTTGAAGCGGAGAAAACAGAGGAATGATGGTATCCAGGCATGGCATGGAAGGCAAAGACAAAGGGCAACCCGGGCAGAGAAATTGAGATTCCAAGCCTTGAAGGCCGATGATCAAGAAGCTTACATGAGAATGGTGAAAGAGAGTAAGAATGAAAGATTAACTGTGCTTCTTGAAGAAACAAATAAACTACTTGTAAATTTAGGAGCAGCTGTTCAACGTCAAAAGGACTTCAAACATTCAGATGGCATTGAACCCTTGGAAGATTCCGAAGCTGATTTACCTGAGTCAGATGCTTCAAAGAATGGAATTTATAAGGAATCACCTGGTGATGATGATATAGATGCGATAGATTCTGATCACAATGATGGTGACTCTAACGATTTACTTGAAGGTCAACGACAATACAATTCTGCCATACATTCAATTCAGGAAAAGGTAACTGAGCAACCGTCTATACTTCAAGGTGGAGAATTAAGATCATATCAGATAGAGGGGCTCCAATGGATGCTTTCTTTGTTTAATAACAACTTAAATGGGATTTTGGCTGATGAAATGGGGCTTGGGAAAACAATTCAAACGATTTCTCTCATAGCACATCTTTTCGAATACAAAGGTGTGTCTGGTCCCCACTTGATTGTTGCTCCAAAGGCAGTTCTGCCAAACTGGATCATTGAATTCTCAACGTGGGCTCCTAGCATTAAAACTATTCTTTATGATGGACGGATGGATGAGAGAAAAGCAATAAAGGAGGAATATTCAGGAGAGGGGAAATTTAATGTTATGATTACACATTATGATCTTATAATGAGAGACAAAGCGTTTCTCAAGAAAATTAAATGGATCTACTTAATTGTGGATGAAGGTCATCGGTTGAAGAATCATGAGTCTGTTCTAGCAAAAACCTTGGACAATAGCTATCACATCCAACGAAGACTTTTGTTGACTGGTACCCCAATTCAGAACAGTTTGCAGGAATTGTGGTCCCTGCTTAATTTTCTTCTTCCAAGCATTTTCAACTCCGTTCAAAATTTCGAGGACTGGTTCAATGCCCCCTTTGCAGACCGAGTTGATGTCTCTCTATCAGATGAAGAACAACTATTAATCATTCGGCGTCTACATCAAGTAATTAGGCCCTTCATATTAAGAAGGAAAAAAAATGAGGTGGAAAAATTTCTTCCTGGGAAATCTCAGGTCATACTCAAATGTGATATGTCAGCCTGGCAAAAGGTTTATTATCAACAAGTTACTGACGTAGGCAGAGTTGGTTTGGACAACGGTACTGGAAAATCGAAAAGTCTACAGAACTTAACGATGCAACTCAGAAAGTGTTGTAACCATCCTTACCTCTTTGTGGGAGACTATGATATGTATAAATGTAAGGAGGAGATTGTCAGAGCATCAGGTAAGTTTGAACTTCTTGACCGTTTGCTCCCAAAACTTCGCAGAGCTGGTCACCGAGTCCTCCTTTTCTCACAAATGACTCGACTCATGGACACTCTCGAAGTTTATTTACGGCTTCATGATTTCAAGTATCTTAGACTTGATGGCTCAACGAAAACTGAAGAAAGAGGCTCTCTACTACGAAAATTTAATGCTCCTGACTCCCCATACTTTATGTTTCTCTTAAGCACCCGGGCAGGCGGTCTTGGTTTGAACTTACAAACAGCAGATACTGTTATAATCTTCGACAGTGATTGGAACCCACAAATGGATCAACAAGCCGAGGACCGAGCACATCGCATTGGACAAAAAAAGGAAGTTCGGGTTTTCGTGTTGGTTAGTGTGGGGTCAGTTGAAGAGGTGATTTTAGAGCGTGCGAAACAAAAGATGGGTATTGACGCGAAAGTCATTCAGGCAGGACTTTTCAATACAACTTCGACAGCCCAGGACAGAAGAGAAATGTTGGAGGTGATTATGCGTCGAGGTTCAAGCTCACTTGGGGCAGATGTGCCTAGCGAGAGAGAAATTAACCGCCTTGCTGCTCGATCAGATGAGGAATTTTGGCTGTTCGAGAAAATGGACGAAGAGAGAAGACAAAAGGAAAACTACAGATCACGTCTCATGGAAGAGCATGAATTGCCAGATTGGGTGTATGCTCCAATTAAAAAGGATGACAAGGCCAAAGATTTCAACAGCGGCGTTACTGGAAAGCGGAAAAGAAAAGATGTGATATATGCTGATACATTGAGTGAGCTACAATGGATGCAGGCTATGGAGAATGGTGGGGACATGTCAAAGCTTTCAGCTAAAGGGAAAAGAAGAGAGTCAAGAGACCACCTCTCATCTGACAGCATAGCACAAGCCAGTGATAATACAGGGGCAGATGAAAGCATATTACAGTCGAGGGCTAAAATTGTCCCTACAGAAAATGACAGAACTTGGGAAGATAGTTTCCATGTCACTCCTTCCTCAAAGAGATTCAAGCCTGAAGGAACAAATTTCCAGAAACATGCACACGAGGATGTCAGTGGAAGTGGATTGGACCAGCCTGTTTTCTCCTGGAATATTCACAAAAAGAAGAGATCAAGCCATCTTGGTCAGGGTTCAGCATCCGAGAGTAGAGGACATAATTCAAATGGAAGAGCAAACTGGAACTGA
Protein sequence

>Msa0138500

MEEKKEKEQQHTKTLISALNFLSRDVPLPSHLLDSVSSIYRLNSNVNGDVGSSGDDLITDLEDALSKQRPKCASGFKLEEARESRHQNQIRHRLNELQELPSSRGEDLQTKCLLELYGLKLAELQSKVRSDVSSEYWLNVECAYPDRKLFDWGMMRLRRPFYGVGDPFAMDADNQLRKRRDSERLSRLEEVEKNHIETTKRRFFAEILNSVRELQLQSQASLKRRKQRNDGIQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKESKNERLTVLLEETNKLLVNLGAAVQRQKDFKHSDGIEPLEDSEADLPESDASKNGIYKESPGDDDIDAIDSDHNDGDSNDLLEGQRQYNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLFEYKGVSGPHLIVAPKAVLPNWIIEFSTWAPSIKTILYDGRMDERKAIKEEYSGEGKFNVMITHYDLIMRDKAFLKKIKWIYLIVDEGHRLKNHESVLAKTLDNSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVQNFEDWFNAPFADRVDVSLSDEEQLLIIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGTGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYKCKEEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDTLEVYLRLHDFKYLRLDGSTKTEERGSLLRKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEVIMRRGSSSLGADVPSEREINRLAARSDEEFWLFEKMDEERRQKENYRSRLMEEHELPDWVYAPIKKDDKAKDFNSGVTGKRKRKDVIYADTLSELQWMQAMENGGDMSKLSAKGKRRESRDHLSSDSIAQASDNTGADESILQSRAKIVPTENDRTWEDSFHVTPSSKRFKPEGTNFQKHAHEDVSGSGLDQPVFSWNIHKKKRSSHLGQGSASESRGHNSNGRANWN*