AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0834320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0834320 MtrunA17_Chr5g0399801 96.511 1089 37 1 1 1088 1 1089 0.0 2157
Msa0834320 MtrunA17_Chr4g0003501 71.978 1067 186 10 23 1088 1 955 0.0 1449
Msa0834320 MtrunA17_Chr4g0003511 69.935 1081 209 12 23 1088 73 1052 0.0 1413
Msa0834320 MtrunA17_Chr7g0232811 44.090 533 211 10 576 1088 74 539 2.88e-131 409
Msa0834320 MtrunA17_Chr8g0354821 39.761 586 305 14 532 1085 116 685 6.86e-125 397
Msa0834320 MtrunA17_Chr3g0080761 41.111 540 296 14 567 1087 127 663 1.69e-122 390
Msa0834320 MtrunA17_Chr7g0252211 42.553 517 261 13 603 1088 246 757 1.66e-118 383
Msa0834320 MtrunA17_Chr6g0476121 42.604 507 258 11 611 1088 141 643 6.93e-118 377
Msa0834320 MtrunA17_Chr7g0232981 42.105 532 212 11 570 1088 68 516 1.03e-117 373
Msa0834320 MtrunA17_Chr6g0476111 41.811 519 265 12 603 1088 180 694 2.28e-115 372
Msa0834320 MtrunA17_Chr7g0255181 39.962 523 279 17 580 1087 202 704 4.55e-115 372
Msa0834320 MtrunA17_Chr8g0368901 42.174 460 244 8 617 1057 299 755 5.15e-115 374
Msa0834320 MtrunA17_Chr7g0232841 41.948 534 207 13 576 1088 77 528 2.10e-114 364
Msa0834320 MtrunA17_Chr8g0368911 41.342 462 249 8 615 1057 290 748 4.46e-112 366
Msa0834320 MtrunA17_Chr1g0170651 41.373 539 257 11 576 1088 41 546 2.82e-111 357
Msa0834320 MtrunA17_Chr1g0163051 39.000 500 283 9 581 1064 158 651 3.59e-110 357
Msa0834320 MtrunA17_Chr8g0369301 41.048 458 250 7 618 1057 280 735 8.11e-108 354
Msa0834320 MtrunA17_Chr6g0467421 39.103 468 246 12 615 1057 109 562 8.16e-95 313
Msa0834320 MtrunA17_Chr6g0467381 39.316 468 245 12 615 1057 109 562 8.41e-95 313
Msa0834320 MtrunA17_Chr6g0467531 38.889 468 247 12 615 1057 109 562 2.27e-94 312
Msa0834320 MtrunA17_Chr6g0467401 39.103 468 246 12 615 1057 109 562 8.14e-93 308
Msa0834320 MtrunA17_Chr1g0163041 37.791 516 276 17 581 1064 68 570 9.22e-91 302
Msa0834320 MtrunA17_Chr3g0094881 36.454 502 262 15 585 1057 148 621 1.08e-86 293
Msa0834320 MtrunA17_Chr6g0467411 34.510 510 267 14 584 1057 2 480 1.59e-77 263
Msa0834320 MtrunA17_Chr2g0306961 34.394 503 254 15 581 1057 9 461 4.83e-74 253
Msa0834320 MtrunA17_Chr5g0403241 34.954 329 150 9 801 1088 1202 1507 2.73e-44 175
Msa0834320 MtrunA17_Chr7g0232751 57.522 113 44 1 980 1088 7 119 5.72e-38 138
Msa0834320 MtrunA17_Chr4g0075321 38.182 220 107 5 875 1088 868 1064 3.95e-37 152
Msa0834320 MtrunA17_Chr8g0373821 33.871 310 149 12 806 1083 248 533 4.23e-36 144
Msa0834320 MtrunA17_Chr7g0232861 39.037 187 93 4 576 758 73 242 2.76e-32 126
Msa0834320 MtrunA17_Chr1g0183321 30.606 330 159 11 808 1083 428 741 8.93e-32 133
Msa0834320 MtrunA17_Chr1g0190311 28.857 350 160 10 801 1086 318 642 3.77e-30 127
Msa0834320 MtrunA17_Chr7g0232761 38.191 199 94 6 576 766 90 267 4.89e-30 120
Msa0834320 MtrunA17_Chr7g0262001 27.108 332 162 9 810 1083 388 697 4.08e-27 118
Msa0834320 MtrunA17_Chr7g0232871 46.667 105 27 1 865 969 2 77 1.99e-23 96.3
Msa0834320 MtrunA17_Chr2g0305371 28.875 329 151 15 779 1087 206 471 3.75e-20 95.5
Msa0834320 MtrunA17_Chr1g0201621 33.333 195 92 8 893 1084 61 220 4.92e-19 91.7
Msa0834320 MtrunA17_Chr1g0201311 32.821 195 93 8 893 1084 61 220 1.42e-18 90.5
Msa0834320 MtrunA17_Chr6g0477001 30.303 198 104 6 890 1087 87 250 3.03e-18 87.4
Msa0834320 MtrunA17_Chr3g0125251 34.694 196 84 7 898 1087 1307 1464 5.50e-18 90.5
Msa0834320 MtrunA17_Chr6g0460921 29.461 241 126 10 853 1087 217 419 4.46e-15 79.0
Msa0834320 MtrunA17_Chr5g0448331 33.333 153 91 3 643 787 267 416 1.55e-14 78.2
Msa0834320 MtrunA17_Chr8g0347071 33.333 156 66 5 914 1063 806 929 1.31e-12 72.4
Msa0834320 MtrunA17_Chr7g0235081 32.919 161 81 5 904 1063 182 316 8.18e-12 68.2
Msa0834320 MtrunA17_Chr7g0275611 32.051 156 68 5 914 1063 821 944 1.63e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0834320 AT2G22740.2 64.054 523 171 8 581 1088 270 790 0.0 664
Msa0834320 AT2G22740.1 64.054 523 171 8 581 1088 270 790 0.0 664
Msa0834320 AT2G35160.2 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0834320 AT2G35160.5 61.047 516 167 5 580 1088 270 758 0.0 652
Msa0834320 AT2G35160.3 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0834320 AT2G35160.1 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0834320 AT2G35160.4 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0834320 AT5G04940.2 41.459 521 285 14 581 1087 155 669 1.16e-119 384
Msa0834320 AT5G04940.1 41.459 521 285 14 581 1087 155 669 1.16e-119 384
Msa0834320 AT5G13960.1 40.255 549 283 13 570 1088 91 624 7.16e-117 375
Msa0834320 AT5G13960.2 42.650 483 245 10 635 1088 11 490 8.41e-116 367
Msa0834320 AT1G73100.1 39.439 535 294 14 569 1087 148 668 2.26e-113 367
Msa0834320 AT4G13460.1 38.710 527 296 11 555 1062 123 641 2.18e-109 355
Msa0834320 AT4G13460.2 38.710 527 296 11 555 1062 123 641 2.18e-109 355
Msa0834320 AT2G33290.1 37.278 507 300 7 566 1057 134 637 3.24e-105 344
Msa0834320 AT2G33290.3 37.278 507 300 7 566 1057 134 637 3.24e-105 344
Msa0834320 AT2G33290.4 37.278 507 300 7 566 1057 134 637 3.24e-105 344
Msa0834320 AT2G33290.2 37.278 507 300 7 566 1057 134 637 3.24e-105 344
Msa0834320 AT1G17770.1 35.609 542 310 14 569 1087 167 692 4.41e-92 310
Msa0834320 AT2G24740.1 37.873 536 285 18 569 1087 250 754 5.73e-89 303
Msa0834320 AT5G47150.1 47.685 216 110 3 577 790 114 328 5.24e-52 186
Msa0834320 AT5G47160.1 33.691 466 237 17 328 782 3 407 7.19e-51 186
Msa0834320 AT5G47160.3 33.691 466 237 17 328 782 3 407 7.19e-51 186
Msa0834320 AT5G47160.2 33.691 466 237 17 328 782 3 407 7.19e-51 186
Msa0834320 AT2G23740.1 31.915 329 169 11 794 1087 1066 1374 8.28e-36 148
Msa0834320 AT2G23740.3 31.915 329 169 11 794 1087 1073 1381 8.68e-36 148
Msa0834320 AT2G23740.6 31.915 329 169 11 794 1087 1073 1381 8.68e-36 148
Msa0834320 AT2G23740.2 31.915 329 169 11 794 1087 1073 1381 8.68e-36 148
Msa0834320 AT3G04380.1 28.035 346 167 11 801 1086 137 460 1.51e-28 121
Msa0834320 AT3G04380.2 28.035 346 167 11 801 1086 110 433 1.54e-28 121
Msa0834320 AT3G04380.3 28.035 346 167 11 801 1086 121 444 1.57e-28 121
Msa0834320 AT3G04380.4 28.035 346 167 11 801 1086 137 460 1.72e-28 121
Msa0834320 AT3G04380.6 28.035 346 167 11 801 1086 110 433 2.39e-28 120
Msa0834320 AT3G04380.5 28.035 346 167 11 801 1086 94 417 2.79e-28 120
Msa0834320 AT2G05900.1 34.975 203 121 7 656 848 1 202 6.69e-28 115
Msa0834320 AT2G05900.1 39.286 84 43 2 1004 1087 236 311 4.88e-11 65.9
Msa0834320 AT2G23740.4 32.171 258 124 9 794 1016 1073 1314 2.09e-26 117
Msa0834320 AT2G23740.5 32.171 258 124 9 794 1016 1073 1314 2.09e-26 117
Msa0834320 AT1G04050.2 27.246 334 169 12 808 1086 407 721 1.08e-25 114
Msa0834320 AT1G04050.1 27.246 334 169 12 808 1086 407 721 1.08e-25 114
Msa0834320 AT1G04050.3 33.166 199 111 5 891 1086 438 617 1.90e-25 113
Msa0834320 AT5G43990.15 27.410 332 168 11 808 1086 396 707 2.66e-25 113
Msa0834320 AT5G43990.10 27.410 332 168 11 808 1086 396 707 2.66e-25 113
Msa0834320 AT5G43990.3 27.410 332 168 11 808 1086 393 704 2.81e-25 113
Msa0834320 AT5G43990.11 27.410 332 168 11 808 1086 393 704 2.81e-25 113
Msa0834320 AT5G43990.1 27.410 332 168 11 808 1086 393 704 2.81e-25 113
Msa0834320 AT5G43990.4 27.410 332 168 11 808 1086 393 704 2.81e-25 113
Msa0834320 AT5G43990.16 27.410 332 168 11 808 1086 373 684 2.83e-25 113
Msa0834320 AT5G43990.5 27.410 332 168 11 808 1086 373 684 2.83e-25 113
Msa0834320 AT5G43990.17 27.410 332 168 11 808 1086 373 684 2.83e-25 113
Msa0834320 AT5G43990.14 27.410 332 168 11 808 1086 373 684 2.83e-25 113
Msa0834320 AT5G43990.9 27.410 332 168 11 808 1086 416 727 2.92e-25 113
Msa0834320 AT5G43990.2 27.410 332 168 11 808 1086 416 727 2.92e-25 113
Msa0834320 AT5G43990.8 27.410 332 168 11 808 1086 324 635 5.32e-25 112
Msa0834320 AT5G43990.12 27.410 332 168 11 808 1086 324 635 5.32e-25 112
Msa0834320 AT5G43990.6 27.410 332 168 11 808 1086 324 635 5.32e-25 112
Msa0834320 AT5G43990.13 27.410 332 168 11 808 1086 324 635 5.32e-25 112
Msa0834320 AT5G43990.7 27.410 332 168 11 808 1086 304 615 5.96e-25 112
Msa0834320 AT3G03750.2 30.800 250 126 8 847 1087 138 349 2.05e-21 97.8
Msa0834320 AT4G30860.1 31.047 277 126 11 817 1087 247 464 8.65e-19 91.7
Msa0834320 AT1G76710.2 33.838 198 93 7 893 1087 66 228 9.35e-19 91.3
Msa0834320 AT1G76710.1 33.838 198 93 7 893 1087 66 228 9.35e-19 91.3
Msa0834320 AT1G76710.4 33.838 198 93 7 893 1087 66 228 1.12e-18 91.3
Msa0834320 AT1G76710.3 33.838 198 93 7 893 1087 66 228 1.28e-18 91.3
Msa0834320 AT1G77300.2 33.158 190 95 7 898 1087 1009 1166 3.90e-17 87.8
Msa0834320 AT1G77300.1 33.158 190 95 7 898 1087 1009 1166 5.54e-17 87.4
Msa0834320 AT3G59960.3 31.395 172 84 6 916 1087 112 249 4.57e-15 77.4
Msa0834320 AT3G59960.2 31.395 172 84 6 916 1087 112 249 4.57e-15 77.4
Msa0834320 AT3G59960.4 31.395 172 84 6 916 1087 112 249 4.57e-15 77.4
Msa0834320 AT1G57820.1 33.117 154 91 4 643 787 277 427 1.89e-14 78.6
Msa0834320 AT1G57820.3 33.117 154 91 4 643 787 277 427 1.89e-14 78.6
Msa0834320 AT1G57820.2 32.450 151 93 4 643 787 277 424 1.05e-13 75.9
Msa0834320 AT3G59960.1 31.395 172 84 6 916 1087 112 249 1.10e-13 73.9
Msa0834320 AT2G44150.1 29.070 172 88 6 916 1087 117 254 2.84e-13 73.2
Msa0834320 AT3G61740.2 35.032 157 63 6 914 1063 838 962 3.66e-13 74.7
Msa0834320 AT3G03750.1 27.600 250 118 10 847 1087 138 333 4.46e-13 72.4
Msa0834320 AT3G61740.1 35.032 157 63 6 914 1063 874 998 4.80e-13 74.3
Msa0834320 AT4G27910.1 31.098 164 70 6 926 1083 896 1022 3.46e-11 68.2

Find 268 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGATGTTGGTTTAAATT+TGG 0.118788 5_4:-7340886 None:intergenic
TCAATTGGATGTGCCTATTT+TGG 0.119192 5_4:+7340089 Msa0834320:CDS
TCAAGTGGATGGGGATATTT+TGG 0.160554 5_4:+7339957 Msa0834320:CDS
GAACATTCTGAAGAAGAATT+AGG 0.193360 5_4:+7339499 Msa0834320:CDS
ATGGATGTTGGTTTAAATTT+GGG 0.221824 5_4:-7340885 None:intergenic
ATCTTAGTTATGTATTTAAA+TGG 0.224199 5_4:-7341962 None:intergenic
TTTACATAACCACGTGGTTT+TGG 0.228610 5_4:-7341128 None:intergenic
CGTTCAAGCTTCTGATCTTC+TGG 0.239657 5_4:-7341608 None:intergenic
TTCAAACTACTTTCGAGTTC+TGG 0.240711 5_4:-7340786 None:intergenic
GTTAAGAGTGGTGAAGATTT+AGG 0.245357 5_4:+7339655 Msa0834320:CDS
TGGCCTTCATCGCCAGATTC+AGG 0.250113 5_4:+7341442 Msa0834320:CDS
CTTGAACTTGAGTGCGAATC+TGG 0.264717 5_4:-7342418 None:intergenic
AGAATAGAGCTTAATATAAT+TGG 0.267824 5_4:+7341422 Msa0834320:CDS
CAACTAGTATTGTTGCTTCC+GGG 0.287565 5_4:+7341504 Msa0834320:CDS
TCTTCGTTATTATCCAAAAT+AGG 0.293857 5_4:-7340102 None:intergenic
GGTGATCATAAAGGACATTC+TGG 0.295328 5_4:-7342537 None:intergenic
ATAGCTCCATTATGATTAAA+TGG 0.296004 5_4:-7342094 None:intergenic
TCCTTGAATTCCATCCCTTC+TGG 0.302980 5_4:+7342256 Msa0834320:CDS
GATTTAGGTGGTGGTGATTC+GGG 0.318391 5_4:+7339670 Msa0834320:CDS
TGAGTCATATTGGCAGGATA+TGG 0.322593 5_4:+7341748 Msa0834320:CDS
GTTGGAGGGCACTTGCATTT+AGG 0.324234 5_4:-7342151 None:intergenic
AAAGGCTGTAATTGTACTAA+TGG 0.324470 5_4:+7342019 Msa0834320:CDS
TGAAGACTGTAGCTTGAAAA+AGG 0.324757 5_4:+7339912 Msa0834320:CDS
GGGCATGGAAGCTGTGGATA+TGG 0.325224 5_4:+7340011 Msa0834320:CDS
GGGAAGCCAGTGATGGTAAA+TGG 0.328236 5_4:+7339520 Msa0834320:CDS
GCAACTAGTATTGTTGCTTC+CGG 0.330626 5_4:+7341503 Msa0834320:CDS
TTAGTACAATTACAGCCTTT+TGG 0.332092 5_4:-7342016 None:intergenic
GGAACCACCTATATTGATAT+TGG 0.333643 5_4:-7340403 None:intergenic
GGAGACTTTGGATGCGGAAT+TGG 0.341628 5_4:+7340149 Msa0834320:CDS
TGAAGGAGGCTTTAACTAAA+AGG 0.341984 5_4:+7340436 Msa0834320:CDS
AAGATCATGGGATCTGTTCC+TGG 0.350847 5_4:+7341371 Msa0834320:CDS
AAAGGTGTACTAAATCATTC+TGG 0.352831 5_4:+7340987 Msa0834320:CDS
TTTGATTGAAAAGATGAATT+CGG 0.361033 5_4:+7339453 None:intergenic
AATCTATACCACCCTGAATC+TGG 0.365878 5_4:-7341454 None:intergenic
GAGATTCCATTTAATCATAA+TGG 0.367693 5_4:+7342088 Msa0834320:CDS
AACATTCTGAAGAAGAATTA+GGG 0.368058 5_4:+7339500 Msa0834320:CDS
AGATTTAGGTGGTGGTGATT+CGG 0.370179 5_4:+7339669 Msa0834320:CDS
CGGTATGGAAACTTCAGATA+TGG 0.371541 5_4:+7340275 Msa0834320:CDS
GACATTCTGGGCATAGAGAT+TGG 0.378566 5_4:-7342524 None:intergenic
TATGGTGTTCACAGCACATA+TGG 0.381418 5_4:-7341921 None:intergenic
CATGGTCTCATCTCATCAAT+TGG 0.383281 5_4:+7340074 Msa0834320:CDS
AGAATGATTTAGTACACCTT+TGG 0.384346 5_4:-7340985 None:intergenic
CCGGAAGAATGTGGACCGTT+TGG 0.384555 5_4:+7339607 Msa0834320:CDS
ACATTCTGGGCATAGAGATT+GGG 0.385745 5_4:-7342523 None:intergenic
TTTATGATCACCATGACAAC+AGG 0.387530 5_4:+7342548 Msa0834320:CDS
GATTCTTTCACATTTGACTT+TGG 0.398140 5_4:-7341281 None:intergenic
TCATTGTCCAATATCAATAT+AGG 0.398722 5_4:+7340396 Msa0834320:CDS
TTCTACAAACAGCTTGGAAC+AGG 0.402055 5_4:-7341232 None:intergenic
TCAAACTACTTTCGAGTTCT+GGG 0.404581 5_4:-7340785 None:intergenic
AAATGACGGACCTGCAGAAC+TGG 0.405443 5_4:+7340245 Msa0834320:CDS
GAAAGTAGTGCTAGGTTTGA+TGG 0.408534 5_4:+7340824 Msa0834320:CDS
TGAAGCTTCAAAAGTGGAAT+TGG 0.409850 5_4:+7339987 Msa0834320:CDS
GTTTCGCTTGCGAAGAAAGC+CGG 0.413635 5_4:+7341796 Msa0834320:CDS
TCAAATTGATGAGTCTACTT+TGG 0.415306 5_4:+7340221 Msa0834320:CDS
AAAATCAGCTTCAACAAAGT+TGG 0.420516 5_4:-7340622 None:intergenic
GCGAGGTCAAGAATTCTGTT+AGG 0.421124 5_4:+7341657 Msa0834320:CDS
TGTGGTTCTGTGGAATGTAC+TGG 0.421622 5_4:+7342697 Msa0834320:CDS
GCCAATCTCATCTCAGTAGA+TGG 0.421747 5_4:-7340681 None:intergenic
CACCCTGAATCTGGCGATGA+AGG 0.425090 5_4:-7341445 None:intergenic
TGTTGTCATGGTGATCATAA+AGG 0.429329 5_4:-7342546 None:intergenic
TCTATGAAGTTGAGTCATAT+TGG 0.437887 5_4:+7341738 Msa0834320:CDS
GACATAGCTACCTCGCCAAC+TGG 0.438153 5_4:-7340357 None:intergenic
ATTGGTGGGCATGGAGACTT+TGG 0.440213 5_4:+7340137 Msa0834320:CDS
TGCAATATTGTCCCTCCAAA+AGG 0.442817 5_4:+7342001 Msa0834320:CDS
GAGTCATATTGGCAGGATAT+GGG 0.443386 5_4:+7341749 Msa0834320:CDS
AGAAGATCAGAAGCTTGAAC+GGG 0.449548 5_4:+7341610 Msa0834320:CDS
GGAAGCTGTGGATATGGAAT+TGG 0.449691 5_4:+7340017 Msa0834320:CDS
GGCCAAGTCAGAATGTCCTT+GGG 0.450886 5_4:+7340845 Msa0834320:CDS
TCATCACAAACCGACATTGA+TGG 0.458444 5_4:-7339478 None:intergenic
CGGGTCAACCAGAGCTTGCT+TGG 0.460037 5_4:+7341816 Msa0834320:CDS
TCTGTTCCTGGGGTTGAAGT+TGG 0.460888 5_4:+7341383 Msa0834320:CDS
TAAAACCAAGTCAATGGGAT+GGG 0.462217 5_4:+7342225 Msa0834320:CDS
TGGCCAAGTCAGAATGTCCT+TGG 0.468262 5_4:+7340844 Msa0834320:CDS
GGAAAACATGAACATCGTTA+AGG 0.468416 5_4:+7340731 Msa0834320:CDS
AGTACCTTCCAAGCAAGCTC+TGG 0.469016 5_4:-7341824 None:intergenic
TCCAGAAGGGATGGAATTCA+AGG 0.469469 5_4:-7342257 None:intergenic
TATAATAGAGTCAGCCAACT+TGG 0.470293 5_4:+7342178 Msa0834320:CDS
GAGTCTCCATTTACCATCAC+TGG 0.471142 5_4:-7339526 None:intergenic
GGCCTTCATCGCCAGATTCA+GGG 0.471401 5_4:+7341443 Msa0834320:CDS
ACTATCGATGCCGCTCAGTT+CGG 0.474989 5_4:+7342466 Msa0834320:CDS
GGGACAATATTGCAACAATC+AGG 0.476635 5_4:-7341992 None:intergenic
GAATTCTGTTAGGGTGATAC+GGG 0.481274 5_4:+7341667 Msa0834320:CDS
GGCACTGGATAATCATCATC+AGG 0.481375 5_4:+7340701 Msa0834320:CDS
CAGAAGATCAGAAGCTTGAA+CGG 0.482485 5_4:+7341609 Msa0834320:CDS
TATGGGGCCACATGGGAAGC+TGG 0.483438 5_4:+7341766 Msa0834320:CDS
ACACTCATCCTGGCTGAGAC+GGG 0.486717 5_4:-7340523 None:intergenic
AGAATTCTGTTAGGGTGATA+CGG 0.488400 5_4:+7341666 Msa0834320:CDS
AGAACTCGAAAGTAGTTTGA+AGG 0.490279 5_4:+7340788 Msa0834320:CDS
ATTTAGTACACCTTTGGACT+TGG 0.490483 5_4:-7340979 None:intergenic
GTCTCATCTCATCAAGTGGA+TGG 0.491155 5_4:+7339946 Msa0834320:CDS
GTTGAATATTTATGCCAAGT+TGG 0.491644 5_4:-7342192 None:intergenic
CCAAACGGTCCACATTCTTC+CGG 0.491712 5_4:-7339607 None:intergenic
GATATGGAATTTACAACAGA+AGG 0.491786 5_4:+7340291 Msa0834320:CDS
CCGACCAATGCCAGTTCTGC+AGG 0.494283 5_4:-7340255 None:intergenic
AACTAGTATTGTTGCTTCCG+GGG 0.494402 5_4:+7341505 Msa0834320:CDS
AGGGAATGCGGTCAAGAAGC+TGG 0.495760 5_4:+7340647 Msa0834320:CDS
GTTATGTATTTAAATGGAGG+GGG 0.500203 5_4:-7341956 None:intergenic
CTTGGTCGTAGTAATTTAAG+TGG 0.500245 5_4:+7341161 Msa0834320:CDS
TAATGAAGGGGAGAAGATCA+TGG 0.501403 5_4:+7341358 Msa0834320:CDS
ATCTTATATATCAGAGGCAT+CGG 0.501515 5_4:+7340332 Msa0834320:CDS
TACTGAGATGAGATTGGCAC+TGG 0.503247 5_4:+7340686 Msa0834320:CDS
TGGCAGGATATGGGGCCACA+TGG 0.503771 5_4:+7341758 Msa0834320:CDS
CTGACTCTATTATAACAAGT+TGG 0.504283 5_4:-7342169 None:intergenic
CAACGATGAACCTGCAAAAG+TGG 0.504681 5_4:+7339849 Msa0834320:CDS
AAAGGGAGCTATGTTAATGA+AGG 0.505411 5_4:+7341344 Msa0834320:CDS
CGCGTTGAAGATATTTCCTA+CGG 0.505475 5_4:+7341884 Msa0834320:CDS
AAAACTGACATTGGTGGGCA+TGG 0.507583 5_4:+7340128 Msa0834320:CDS
TTTCGCTTGCGAAGAAAGCC+GGG 0.508175 5_4:+7341797 Msa0834320:CDS
GCCGCTCAGTTCGGTAATGT+AGG 0.508262 5_4:+7342475 Msa0834320:CDS
TAATCATCATCAGGTTAAAG+TGG 0.509315 5_4:+7340710 Msa0834320:CDS
TGTACTGGTAGGTTGTATTG+AGG 0.511536 5_4:+7342712 Msa0834320:CDS
AAGGTGTACTAAATCATTCT+GGG 0.513245 5_4:+7340988 Msa0834320:CDS
AAATTTAAACCAACATCCAT+TGG 0.513515 5_4:+7340888 Msa0834320:CDS
TGATAGTCCCAACGACGAAA+AGG 0.515728 5_4:+7339699 Msa0834320:CDS
ATTGGTGGGCGTAGAAGCTA+TGG 0.516134 5_4:+7339873 Msa0834320:CDS
ACCATCTACTGAGATGAGAT+TGG 0.516227 5_4:+7340680 Msa0834320:CDS
TTGAGTGCGAATCTGGCAAA+AGG 0.518542 5_4:-7342411 None:intergenic
AATATCAATATAGGTGGTTC+CGG 0.518966 5_4:+7340405 Msa0834320:CDS
GTGATCATAAAGGACATTCT+GGG 0.521375 5_4:-7342536 None:intergenic
CTTATCTGATCAAGTGGATG+TGG 0.522415 5_4:+7339816 Msa0834320:CDS
TACACCCCATCCCATTGACT+TGG 0.523806 5_4:-7342230 None:intergenic
TGAAGACTGTAGCTTGAGAA+AGG 0.523979 5_4:+7340044 Msa0834320:CDS
CGAGGTCAAGAATTCTGTTA+GGG 0.527113 5_4:+7341658 Msa0834320:CDS
TGAAGTTGAGTCATATTGGC+AGG 0.528849 5_4:+7341742 Msa0834320:CDS
CAATGCTCCCCGTCTCAGCC+AGG 0.529270 5_4:+7340515 Msa0834320:CDS
AAGGAAGCTGAACAAAGAAC+TGG 0.530093 5_4:+7342319 Msa0834320:CDS
ACTTTCCGACGCTTAAACCT+AGG 0.530593 5_4:-7339565 None:intergenic
AGCTTCAAAAGTGGAATTGG+TGG 0.531376 5_4:+7339990 Msa0834320:CDS
AGATCATGGGATCTGTTCCT+GGG 0.531698 5_4:+7341372 Msa0834320:CDS
ATCGTAAGTCAGCTCTTGCA+AGG 0.532130 5_4:-7342611 None:intergenic
TCAACCAGAGCTTGCTTGGA+AGG 0.533430 5_4:+7341820 Msa0834320:CDS
TAGTTATGTATTTAAATGGA+GGG 0.533607 5_4:-7341958 None:intergenic
ACTCTATTATAACAAGTTGG+AGG 0.533970 5_4:-7342166 None:intergenic
CCTAGCACTACTTTCCTGCC+TGG 0.535459 5_4:-7340816 None:intergenic
GCTCCTTTAGACACTCATCC+TGG 0.536997 5_4:-7340533 None:intergenic
AAAAGTGGAATTGGTGGGCA+TGG 0.537948 5_4:+7339996 Msa0834320:CDS
CATTCTGGGCATAGAGATTG+GGG 0.538907 5_4:-7342522 None:intergenic
TGAACCTGCAAAAGTGGTAT+TGG 0.538930 5_4:+7339855 Msa0834320:CDS
TAACGATGAAGCTTCAAAAG+TGG 0.544439 5_4:+7339981 Msa0834320:CDS
GATACAAAACTGACATTGGT+GGG 0.544785 5_4:+7340123 Msa0834320:CDS
AAAGCTTTCTACAAACAGCT+TGG 0.545465 5_4:-7341238 None:intergenic
TGGATGTTGGTTTAAATTTG+GGG 0.545850 5_4:-7340884 None:intergenic
CTCATCTCATCAAGTGGATG+GGG 0.546998 5_4:+7339948 Msa0834320:CDS
AGTTATGTATTTAAATGGAG+GGG 0.547903 5_4:-7341957 None:intergenic
GATAAAACTTCCAGAAGGGA+TGG 0.548978 5_4:-7342266 None:intergenic
TTAGTTATGTATTTAAATGG+AGG 0.549426 5_4:-7341959 None:intergenic
CAACTATTGTTGATCCGCCT+AGG 0.552035 5_4:+7339548 Msa0834320:CDS
TTAAAACCAAGTCAATGGGA+TGG 0.552622 5_4:+7342224 Msa0834320:CDS
CGAAGATACAAAACTGACAT+TGG 0.553321 5_4:+7340119 Msa0834320:CDS
TGCTGACGGTACGAGTGTTG+AGG 0.553577 5_4:+7339633 Msa0834320:CDS
TCTCATCTCATCAAGTGGAT+GGG 0.553872 5_4:+7339947 Msa0834320:CDS
AGCCTCCTTCATACAAGCAC+CGG 0.554334 5_4:-7340424 None:intergenic
GTTTGAAGGTCTCACCAGGC+AGG 0.555243 5_4:+7340802 Msa0834320:CDS
TTTAAACCAACATCCATTGG+TGG 0.555528 5_4:+7340891 Msa0834320:CDS
TGGTTCCGGTGCTTGTATGA+AGG 0.555754 5_4:+7340419 Msa0834320:CDS
CATGAACATCGTTAAGGTCG+AGG 0.556379 5_4:+7340737 Msa0834320:CDS
CCGCTCAGTTCGGTAATGTA+GGG 0.558292 5_4:+7342476 Msa0834320:CDS
AACAACAGTAATCTTTGGGA+TGG 0.558592 5_4:+7342379 Msa0834320:CDS
GGACCGTTTGGTTCTGCTGA+CGG 0.559849 5_4:+7339619 Msa0834320:CDS
TCTGTACCACCAATGGATGT+TGG 0.560078 5_4:-7340897 None:intergenic
TATATTGATATTGGACAATG+AGG 0.560906 5_4:-7340394 None:intergenic
CAGCCAGGATGAGTGTCTAA+AGG 0.561581 5_4:+7340530 Msa0834320:CDS
AGAACTGGCATTGGTCGGTA+TGG 0.564148 5_4:+7340260 Msa0834320:CDS
AAATTCTAGTTCTGATGACA+TGG 0.567262 5_4:+7341037 Msa0834320:CDS
ATGAGAGTGACTCAGTGGCC+CGG 0.569197 5_4:+7341186 Msa0834320:CDS
CAAGCAAGCTCTGGTTGACC+CGG 0.569213 5_4:-7341815 None:intergenic
CCTGTCATCTGTACCACCAA+TGG 0.569944 5_4:-7340904 None:intergenic
GACACTCATCCTGGCTGAGA+CGG 0.572210 5_4:-7340524 None:intergenic
CCATTGGTGGTACAGATGAC+AGG 0.575959 5_4:+7340904 Msa0834320:CDS
AAAACCAAGTCAATGGGATG+GGG 0.578324 5_4:+7342226 Msa0834320:CDS
AAGGGAGCTATGTTAATGAA+GGG 0.578536 5_4:+7341345 Msa0834320:CDS
ACTAGTATTGTTGCTTCCGG+GGG 0.578670 5_4:+7341506 Msa0834320:CDS
AAGCCTCTAGTCTATGAGTG+TGG 0.578730 5_4:+7342127 Msa0834320:CDS
AAGTGGCTGTAGTTTGAAGA+AGG 0.580199 5_4:+7339780 Msa0834320:CDS
TGGAGAGGTTCTTGAGGACA+AGG 0.580571 5_4:+7342300 Msa0834320:CDS
ATTGGTGGGCATGGAAGCTG+TGG 0.583994 5_4:+7340005 Msa0834320:CDS
GGGCATGGAGACTTTGGATG+CGG 0.586754 5_4:+7340143 Msa0834320:CDS
TGTGGTCTCATCTCATCAAG+TGG 0.587074 5_4:+7339942 Msa0834320:CDS
CGGACCTGCAGAACTGGCAT+TGG 0.588611 5_4:+7340251 Msa0834320:CDS
CACAGATAAAACTTCCAGAA+GGG 0.588807 5_4:-7342270 None:intergenic
GGCAGGATATGGGGCCACAT+GGG 0.589278 5_4:+7341759 Msa0834320:CDS
AGATACAAAACTGACATTGG+TGG 0.589399 5_4:+7340122 Msa0834320:CDS
ATGGTGTTCACAGCACATAT+GGG 0.589870 5_4:-7341920 None:intergenic
AGCCTCTAGTCTATGAGTGT+GGG 0.592603 5_4:+7342128 Msa0834320:CDS
TCACAGATAAAACTTCCAGA+AGG 0.593451 5_4:-7342271 None:intergenic
TCCCCAAGGACATTCTGACT+TGG 0.593577 5_4:-7340847 None:intergenic
GAGTCTACTTTGGCAAATGA+CGG 0.594825 5_4:+7340231 Msa0834320:CDS
TAAGTCAGCTCTTGCAAGGG+AGG 0.595124 5_4:-7342607 None:intergenic
ACCTGCAAAAGTGGTATTGG+TGG 0.595437 5_4:+7339858 Msa0834320:CDS
CAATTGATGAGATGAGACCA+TGG 0.596287 5_4:-7340073 None:intergenic
CATGAGGAACCCTGTTGTCA+TGG 0.598124 5_4:-7342558 None:intergenic
AAGCAACAATACTAGTTGCA+AGG 0.598665 5_4:-7341499 None:intergenic
AGTAGTTTGAAGGTCTCACC+AGG 0.598759 5_4:+7340798 Msa0834320:CDS
AGATTTATCTTATATATCAG+AGG 0.600987 5_4:+7340326 Msa0834320:CDS
GGATGTTGGTTTAAATTTGG+GGG 0.601362 5_4:-7340883 None:intergenic
AGTCATATTGGCAGGATATG+GGG 0.602342 5_4:+7341750 Msa0834320:CDS
CCAGGCAGGAAAGTAGTGCT+AGG 0.602466 5_4:+7340816 Msa0834320:CDS
CTCTATTATAACAAGTTGGA+GGG 0.603275 5_4:-7342165 None:intergenic
AATGAAGGGGAGAAGATCAT+GGG 0.604075 5_4:+7341359 Msa0834320:CDS
TCATCACCAACTTCAACCCC+AGG 0.604148 5_4:-7341389 None:intergenic
TTATGTATTTAAATGGAGGG+GGG 0.605614 5_4:-7341955 None:intergenic
AGTGGTGAAGATTTAGGTGG+TGG 0.605730 5_4:+7339661 Msa0834320:CDS
AGGGAGCTATGTTAATGAAG+GGG 0.606446 5_4:+7341346 Msa0834320:CDS
TTCCGGTGCTTGTATGAAGG+AGG 0.609421 5_4:+7340422 Msa0834320:CDS
CGGGGATCTGAATCAGCGGA+TGG 0.611571 5_4:+7341686 Msa0834320:CDS
TGTGGTCTTATCTGATCAAG+TGG 0.612824 5_4:+7339810 Msa0834320:CDS
TATCTGTGAATATATTGGAG+AGG 0.613185 5_4:+7342285 Msa0834320:CDS
GCTTCAAAAGTGGAATTGGT+GGG 0.613307 5_4:+7339991 Msa0834320:CDS
TGGTGGTACAGATGACAGGA+AGG 0.614455 5_4:+7340908 Msa0834320:CDS
TCAGAGGCATCGGCTCCAGT+TGG 0.614475 5_4:+7340342 Msa0834320:CDS
AGAATTAGGGAAGCCAGTGA+TGG 0.615410 5_4:+7339513 Msa0834320:CDS
AATTGATGAGATGAGACCAT+GGG 0.617974 5_4:-7340072 None:intergenic
AGTGAAGTAGTGAATGATGT+TGG 0.618250 5_4:+7342439 Msa0834320:CDS
ATCCGCCTAGGTTTAAGCGT+CGG 0.618613 5_4:+7339560 Msa0834320:CDS
AGCAAGATATATGTTTACGA+TGG 0.618907 5_4:+7341713 Msa0834320:CDS
CTTGAGAAAGGAAGATCCCA+TGG 0.621289 5_4:+7340056 Msa0834320:CDS
ATGAACATCGTTAAGGTCGA+GGG 0.623227 5_4:+7340738 Msa0834320:CDS
GAATTCGGAGCCATCAATGT+CGG 0.623601 5_4:+7339468 Msa0834320:CDS
CACTCATCCTGGCTGAGACG+GGG 0.624068 5_4:-7340522 None:intergenic
TTATCTGATCAAGTGGATGT+GGG 0.624073 5_4:+7339817 Msa0834320:CDS
GCGTTGAAGATATTTCCTAC+GGG 0.625923 5_4:+7341885 Msa0834320:CDS
GGCCCACACTCATAGACTAG+AGG 0.626323 5_4:-7342130 None:intergenic
CAAATGTGAAAGAATCAAAG+AGG 0.632909 5_4:+7341288 Msa0834320:CDS
TTGTCCAATATCAATATAGG+TGG 0.635936 5_4:+7340399 Msa0834320:CDS
TGCTTTGAAGAATAGTAGCG+AGG 0.636465 5_4:+7341640 Msa0834320:CDS
GTACCGTCAGCAGAACCAAA+CGG 0.636826 5_4:-7339622 None:intergenic
CCTGCAGAACTGGCATTGGT+CGG 0.637297 5_4:+7340255 Msa0834320:CDS
TAAGTCATCAGCATAGCCCC+CGG 0.637423 5_4:-7341522 None:intergenic
GGCATCGGCTCCAGTTGGCG+AGG 0.639691 5_4:+7340347 Msa0834320:CDS
ACTTGATCAGATAAGACCAC+AGG 0.642209 5_4:-7339808 None:intergenic
ACTTGATGAGATGAGACCAC+AGG 0.643420 5_4:-7339940 None:intergenic
AAAACTGCGACCAAGTCCAA+AGG 0.643866 5_4:+7340969 Msa0834320:CDS
CATGGGTCAATTAGTAACAC+GGG 0.644532 5_4:+7341055 Msa0834320:CDS
TTTGAAGAAGGAGGATCCTG+TGG 0.645117 5_4:+7339792 Msa0834320:CDS
TCGTAAGTCAGCTCTTGCAA+GGG 0.649908 5_4:-7342610 None:intergenic
AAATGTGAAAGAATCAAAGA+GGG 0.651541 5_4:+7341289 Msa0834320:CDS
GATCAAGTTCGTGATTCCGA+TGG 0.655471 5_4:+7342649 Msa0834320:CDS
ATATATTGGAGAGGTTCTTG+AGG 0.657084 5_4:+7342294 Msa0834320:CDS
ACGAGTGTTGAGGTTAAGAG+TGG 0.661350 5_4:+7339643 Msa0834320:CDS
GACACTGTTGAACAAACAAG+TGG 0.662787 5_4:+7339763 Msa0834320:CDS
GATCATGGGATCTGTTCCTG+GGG 0.665855 5_4:+7341373 Msa0834320:CDS
GCCAAGTCAGAATGTCCTTG+GGG 0.668770 5_4:+7340846 Msa0834320:CDS
ACATGGGTCAATTAGTAACA+CGG 0.669242 5_4:+7341054 Msa0834320:CDS
AAGAGTGGTGAAGATTTAGG+TGG 0.670342 5_4:+7339658 Msa0834320:CDS
CTTAAATTACTACGACCAAG+AGG 0.670569 5_4:-7341158 None:intergenic
CAGTGGCCCGGAATAAAGTG+AGG 0.675048 5_4:+7341198 Msa0834320:CDS
GTTCTGTGGAATGTACTGGT+AGG 0.675695 5_4:+7342701 Msa0834320:CDS
AATTCTAGTTCTGATGACAT+GGG 0.681067 5_4:+7341038 Msa0834320:CDS
GGTGGTACAGATGACAGGAA+GGG 0.684498 5_4:+7340909 Msa0834320:CDS
GCAGCAAATAACATGACATG+AGG 0.684985 5_4:-7342574 None:intergenic
TTGATATATACAGGGCAGGG+TGG 0.688777 5_4:+7341560 Msa0834320:CDS
TTATGATCACCATGACAACA+GGG 0.689712 5_4:+7342549 Msa0834320:CDS
TGGCTGTAGTTTGAAGAAGG+AGG 0.691363 5_4:+7339783 Msa0834320:CDS
GATACGGGGATCTGAATCAG+CGG 0.692287 5_4:+7341682 Msa0834320:CDS
TTCCGACGCTTAAACCTAGG+CGG 0.695004 5_4:-7339562 None:intergenic
CCTGCAAAAGTGGTATTGGT+GGG 0.696602 5_4:+7339859 Msa0834320:CDS
TGGTCATGAGAGTGACTCAG+TGG 0.696808 5_4:+7341181 Msa0834320:CDS
GAAGATCAGAAGCTTGAACG+GGG 0.698030 5_4:+7341611 Msa0834320:CDS
AAAAGTGTCCCAAAACCACG+TGG 0.710733 5_4:+7341119 Msa0834320:CDS
CCCTACATTACCGAACTGAG+CGG 0.715373 5_4:-7342476 None:intergenic
GCATTGCGTCCACATAAACG+TGG 0.716479 5_4:-7340498 None:intergenic
TTATAAACCAGCTTCCCATG+TGG 0.718258 5_4:-7341773 None:intergenic
GAACAAATATCAGATCCCCA+AGG 0.723725 5_4:-7340861 None:intergenic
GTACACAAGAACATTTCTCG+TGG 0.725371 5_4:-7342051 None:intergenic
CTTCATCGCCAGATTCAGGG+TGG 0.729437 5_4:+7341446 Msa0834320:CDS
AAAACATTTACATAACCACG+TGG 0.753070 5_4:-7341134 None:intergenic
AATTCTGTTAGGGTGATACG+GGG 0.761052 5_4:+7341668 Msa0834320:CDS
ATTCTGGGCATAGAGATTGG+GGG 0.768685 5_4:-7342521 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAGATAAATCTTGTTTTA+CGG - chr5_4:7340319-7340338 None:intergenic 15.0%
!! ATCTTAGTTATGTATTTAAA+TGG - chr5_4:7341965-7341984 None:intergenic 15.0%
!! AGATTTATCTTATATATCAG+AGG + chr5_4:7340326-7340345 Msa0834320:CDS 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG - chr5_4:7341020-7341039 None:intergenic 20.0%
!!! AAGTGTTTGTTATTTTCATT+AGG - chr5_4:7341098-7341117 None:intergenic 20.0%
!! TCAAAAATACTTAAGGAAAA+AGG + chr5_4:7341326-7341345 Msa0834320:CDS 20.0%
!! CAAAAATACTTAAGGAAAAA+GGG + chr5_4:7341327-7341346 Msa0834320:CDS 20.0%
!! AGAATAGAGCTTAATATAAT+TGG + chr5_4:7341422-7341441 Msa0834320:CDS 20.0%
!! TTATATGAAGCAAAAAAACA+AGG + chr5_4:7341475-7341494 Msa0834320:CDS 20.0%
!! AAAAAGTTCAAAAAAAGAGA+AGG + chr5_4:7341857-7341876 Msa0834320:CDS 20.0%
!! TAGTTATGTATTTAAATGGA+GGG - chr5_4:7341961-7341980 None:intergenic 20.0%
!! TTAGTTATGTATTTAAATGG+AGG - chr5_4:7341962-7341981 None:intergenic 20.0%
!!! AATTTTTAAAACCAAGTCAA+TGG + chr5_4:7342219-7342238 Msa0834320:CDS 20.0%
!!! ATTTTTAAAACCAAGTCAAT+GGG + chr5_4:7342220-7342239 Msa0834320:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG + chr5_4:7342280-7342299 Msa0834320:CDS 20.0%
!! AACATTCTGAAGAAGAATTA+GGG + chr5_4:7339500-7339519 Msa0834320:CDS 25.0%
!! TCATTGAACTCAAAATTTTG+AGG - chr5_4:7339727-7339746 None:intergenic 25.0%
! TCTTCGTTATTATCCAAAAT+AGG - chr5_4:7340105-7340124 None:intergenic 25.0%
! TATATTGATATTGGACAATG+AGG - chr5_4:7340397-7340416 None:intergenic 25.0%
! TCATTGTCCAATATCAATAT+AGG + chr5_4:7340396-7340415 Msa0834320:CDS 25.0%
!!! ATGGATGTTGGTTTAAATTT+GGG - chr5_4:7340888-7340907 None:intergenic 25.0%
!!! AATGGATGTTGGTTTAAATT+TGG - chr5_4:7340889-7340908 None:intergenic 25.0%
! AAATTTAAACCAACATCCAT+TGG + chr5_4:7340888-7340907 Msa0834320:CDS 25.0%
!! TATGTAAATGTTTTTCCTCT+TGG + chr5_4:7341143-7341162 Msa0834320:CDS 25.0%
! AAATGTGAAAGAATCAAAGA+GGG + chr5_4:7341289-7341308 Msa0834320:CDS 25.0%
! ACAAGCTTCAAAAATACTTA+AGG + chr5_4:7341319-7341338 Msa0834320:CDS 25.0%
!!! CAGATGTTTTGATATATACA+GGG + chr5_4:7341552-7341571 Msa0834320:CDS 25.0%
! AGTTATGTATTTAAATGGAG+GGG - chr5_4:7341960-7341979 None:intergenic 25.0%
! GAGATTCCATTTAATCATAA+TGG + chr5_4:7342088-7342107 Msa0834320:CDS 25.0%
! ATAGCTCCATTATGATTAAA+TGG - chr5_4:7342097-7342116 None:intergenic 25.0%
!! GATGAGTATCTTTTTGATAT+TGG + chr5_4:7342346-7342365 Msa0834320:CDS 25.0%
! ACAAAAACAACAGTAATCTT+TGG + chr5_4:7342374-7342393 Msa0834320:CDS 25.0%
! CAAAAACAACAGTAATCTTT+GGG + chr5_4:7342375-7342394 Msa0834320:CDS 25.0%
!! TTTCTTTTTGATATTGCCAT+CGG - chr5_4:7342668-7342687 None:intergenic 25.0%
!!! AAAAAGAAATACTGCTTTTG+TGG + chr5_4:7342679-7342698 Msa0834320:CDS 25.0%
! GAACATTCTGAAGAAGAATT+AGG + chr5_4:7339499-7339518 Msa0834320:CDS 30.0%
TCAAATTGATGAGTCTACTT+TGG + chr5_4:7340221-7340240 Msa0834320:CDS 30.0%
GATATGGAATTTACAACAGA+AGG + chr5_4:7340291-7340310 Msa0834320:CDS 30.0%
! ATCTTATATATCAGAGGCAT+CGG + chr5_4:7340332-7340351 Msa0834320:CDS 30.0%
TTGTCCAATATCAATATAGG+TGG + chr5_4:7340399-7340418 Msa0834320:CDS 30.0%
AATATCAATATAGGTGGTTC+CGG + chr5_4:7340405-7340424 Msa0834320:CDS 30.0%
!!! TGTTATTTTCTGCTTCTTGT+AGG - chr5_4:7340590-7340609 None:intergenic 30.0%
AAAATCAGCTTCAACAAAGT+TGG - chr5_4:7340625-7340644 None:intergenic 30.0%
!! TTTGTTGAAGCTGATTTTGA+AGG + chr5_4:7340627-7340646 Msa0834320:CDS 30.0%
!! TTGTTGAAGCTGATTTTGAA+GGG + chr5_4:7340628-7340647 Msa0834320:CDS 30.0%
TAATCATCATCAGGTTAAAG+TGG + chr5_4:7340710-7340729 Msa0834320:CDS 30.0%
!! TGGATGTTGGTTTAAATTTG+GGG - chr5_4:7340887-7340906 None:intergenic 30.0%
AGAATGATTTAGTACACCTT+TGG - chr5_4:7340988-7341007 None:intergenic 30.0%
! AAAGGTGTACTAAATCATTC+TGG + chr5_4:7340987-7341006 Msa0834320:CDS 30.0%
AAGGTGTACTAAATCATTCT+GGG + chr5_4:7340988-7341007 Msa0834320:CDS 30.0%
!! AAATTCTAGTTCTGATGACA+TGG + chr5_4:7341037-7341056 Msa0834320:CDS 30.0%
!! AATTCTAGTTCTGATGACAT+GGG + chr5_4:7341038-7341057 Msa0834320:CDS 30.0%
AAAACATTTACATAACCACG+TGG - chr5_4:7341137-7341156 None:intergenic 30.0%
! ATGTTTTCCTCACTTTATTC+CGG - chr5_4:7341208-7341227 None:intergenic 30.0%
! GATTCTTTCACATTTGACTT+TGG - chr5_4:7341284-7341303 None:intergenic 30.0%
CAAATGTGAAAGAATCAAAG+AGG + chr5_4:7341288-7341307 Msa0834320:CDS 30.0%
!!! GCAGATGTTTTGATATATAC+AGG + chr5_4:7341551-7341570 Msa0834320:CDS 30.0%
AGCAAGATATATGTTTACGA+TGG + chr5_4:7341713-7341732 Msa0834320:CDS 30.0%
TCTATGAAGTTGAGTCATAT+TGG + chr5_4:7341738-7341757 Msa0834320:CDS 30.0%
TTATGTATTTAAATGGAGGG+GGG - chr5_4:7341958-7341977 None:intergenic 30.0%
GTTATGTATTTAAATGGAGG+GGG - chr5_4:7341959-7341978 None:intergenic 30.0%
! TTAGTACAATTACAGCCTTT+TGG - chr5_4:7342019-7342038 None:intergenic 30.0%
AAAGGCTGTAATTGTACTAA+TGG + chr5_4:7342019-7342038 Msa0834320:CDS 30.0%
TGTTCTTGTGTACTCAAAAA+TGG + chr5_4:7342061-7342080 Msa0834320:CDS 30.0%
GTTCTTGTGTACTCAAAAAT+GGG + chr5_4:7342062-7342081 Msa0834320:CDS 30.0%
TTCTTGTGTACTCAAAAATG+GGG + chr5_4:7342063-7342082 Msa0834320:CDS 30.0%
! CTCTATTATAACAAGTTGGA+GGG - chr5_4:7342168-7342187 None:intergenic 30.0%
! ACTCTATTATAACAAGTTGG+AGG - chr5_4:7342169-7342188 None:intergenic 30.0%
CTGACTCTATTATAACAAGT+TGG - chr5_4:7342172-7342191 None:intergenic 30.0%
GTTGAATATTTATGCCAAGT+TGG - chr5_4:7342195-7342214 None:intergenic 30.0%
TATCTGTGAATATATTGGAG+AGG + chr5_4:7342285-7342304 Msa0834320:CDS 30.0%
GTTAAGAGTGGTGAAGATTT+AGG + chr5_4:7339655-7339674 Msa0834320:CDS 35.0%
TTATCTGATCAAGTGGATGT+GGG + chr5_4:7339817-7339836 Msa0834320:CDS 35.0%
TGAAGACTGTAGCTTGAAAA+AGG + chr5_4:7339912-7339931 Msa0834320:CDS 35.0%
TAACGATGAAGCTTCAAAAG+TGG + chr5_4:7339981-7340000 Msa0834320:CDS 35.0%
TGAAGCTTCAAAAGTGGAAT+TGG + chr5_4:7339987-7340006 Msa0834320:CDS 35.0%
AATTGATGAGATGAGACCAT+GGG - chr5_4:7340075-7340094 None:intergenic 35.0%
! TCAATTGGATGTGCCTATTT+TGG + chr5_4:7340089-7340108 Msa0834320:CDS 35.0%
CGAAGATACAAAACTGACAT+TGG + chr5_4:7340119-7340138 Msa0834320:CDS 35.0%
AGATACAAAACTGACATTGG+TGG + chr5_4:7340122-7340141 Msa0834320:CDS 35.0%
GATACAAAACTGACATTGGT+GGG + chr5_4:7340123-7340142 Msa0834320:CDS 35.0%
GGAACCACCTATATTGATAT+TGG - chr5_4:7340406-7340425 None:intergenic 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG + chr5_4:7340436-7340455 Msa0834320:CDS 35.0%
! AGAGATTTTCCACGTTTATG+TGG + chr5_4:7340489-7340508 Msa0834320:CDS 35.0%
GGAAAACATGAACATCGTTA+AGG + chr5_4:7340731-7340750 Msa0834320:CDS 35.0%
!! TCAAACTACTTTCGAGTTCT+GGG - chr5_4:7340788-7340807 None:intergenic 35.0%
!! TTCAAACTACTTTCGAGTTC+TGG - chr5_4:7340789-7340808 None:intergenic 35.0%
AGAACTCGAAAGTAGTTTGA+AGG + chr5_4:7340788-7340807 Msa0834320:CDS 35.0%
!! GGATGTTGGTTTAAATTTGG+GGG - chr5_4:7340886-7340905 None:intergenic 35.0%
TTTAAACCAACATCCATTGG+TGG + chr5_4:7340891-7340910 Msa0834320:CDS 35.0%
ATTTAGTACACCTTTGGACT+TGG - chr5_4:7340982-7341001 None:intergenic 35.0%
ACATGGGTCAATTAGTAACA+CGG + chr5_4:7341054-7341073 Msa0834320:CDS 35.0%
! TTACATAACCACGTGGTTTT+GGG - chr5_4:7341130-7341149 None:intergenic 35.0%
! TTTACATAACCACGTGGTTT+TGG - chr5_4:7341131-7341150 None:intergenic 35.0%
CTTAAATTACTACGACCAAG+AGG - chr5_4:7341161-7341180 None:intergenic 35.0%
CTTGGTCGTAGTAATTTAAG+TGG + chr5_4:7341161-7341180 Msa0834320:CDS 35.0%
! TGTTTTCCTCACTTTATTCC+GGG - chr5_4:7341207-7341226 None:intergenic 35.0%
AAAGCTTTCTACAAACAGCT+TGG - chr5_4:7341241-7341260 None:intergenic 35.0%
! TGTTTGTAGAAAGCTTTTGC+AGG + chr5_4:7341244-7341263 Msa0834320:CDS 35.0%
AAAGGGAGCTATGTTAATGA+AGG + chr5_4:7341344-7341363 Msa0834320:CDS 35.0%
AAGGGAGCTATGTTAATGAA+GGG + chr5_4:7341345-7341364 Msa0834320:CDS 35.0%
AAGCAACAATACTAGTTGCA+AGG - chr5_4:7341502-7341521 None:intergenic 35.0%
!!! TGTTTTGATATATACAGGGC+AGG + chr5_4:7341556-7341575 Msa0834320:CDS 35.0%
!! GTTTTGATATATACAGGGCA+GGG + chr5_4:7341557-7341576 Msa0834320:CDS 35.0%
AGAATTCTGTTAGGGTGATA+CGG + chr5_4:7341666-7341685 Msa0834320:CDS 35.0%
! TACAATTACAGCCTTTTGGA+GGG - chr5_4:7342015-7342034 None:intergenic 35.0%
TCTTGTGTACTCAAAAATGG+GGG + chr5_4:7342064-7342083 Msa0834320:CDS 35.0%
TATAATAGAGTCAGCCAACT+TGG + chr5_4:7342178-7342197 Msa0834320:CDS 35.0%
TTAAAACCAAGTCAATGGGA+TGG + chr5_4:7342224-7342243 Msa0834320:CDS 35.0%
TAAAACCAAGTCAATGGGAT+GGG + chr5_4:7342225-7342244 Msa0834320:CDS 35.0%
CACAGATAAAACTTCCAGAA+GGG - chr5_4:7342273-7342292 None:intergenic 35.0%
TCACAGATAAAACTTCCAGA+AGG - chr5_4:7342274-7342293 None:intergenic 35.0%
ATATATTGGAGAGGTTCTTG+AGG + chr5_4:7342294-7342313 Msa0834320:CDS 35.0%
! AACAACAGTAATCTTTGGGA+TGG + chr5_4:7342379-7342398 Msa0834320:CDS 35.0%
AGTGAAGTAGTGAATGATGT+TGG + chr5_4:7342439-7342458 Msa0834320:CDS 35.0%
GTGATCATAAAGGACATTCT+GGG - chr5_4:7342539-7342558 None:intergenic 35.0%
TGTTGTCATGGTGATCATAA+AGG - chr5_4:7342549-7342568 None:intergenic 35.0%
TTTATGATCACCATGACAAC+AGG + chr5_4:7342548-7342567 Msa0834320:CDS 35.0%
TTATGATCACCATGACAACA+GGG + chr5_4:7342549-7342568 Msa0834320:CDS 35.0%
TCATCACAAACCGACATTGA+TGG - chr5_4:7339481-7339500 None:intergenic 40.0%
! TTCTGCTGTTCGTGATTTTC+CGG + chr5_4:7339588-7339607 Msa0834320:CDS 40.0%
AAGAGTGGTGAAGATTTAGG+TGG + chr5_4:7339658-7339677 Msa0834320:CDS 40.0%
! AGATTTAGGTGGTGGTGATT+CGG + chr5_4:7339669-7339688 Msa0834320:CDS 40.0%
GACACTGTTGAACAAACAAG+TGG + chr5_4:7339763-7339782 Msa0834320:CDS 40.0%
AAGTGGCTGTAGTTTGAAGA+AGG + chr5_4:7339780-7339799 Msa0834320:CDS 40.0%
ACTTGATCAGATAAGACCAC+AGG - chr5_4:7339811-7339830 None:intergenic 40.0%
!! TGTGGTCTTATCTGATCAAG+TGG + chr5_4:7339810-7339829 Msa0834320:CDS 40.0%
CTTATCTGATCAAGTGGATG+TGG + chr5_4:7339816-7339835 Msa0834320:CDS 40.0%
TGAACCTGCAAAAGTGGTAT+TGG + chr5_4:7339855-7339874 Msa0834320:CDS 40.0%
CTTGAAAAAGGAAGATCCTG+TGG + chr5_4:7339924-7339943 Msa0834320:CDS 40.0%
TCTCATCTCATCAAGTGGAT+GGG + chr5_4:7339947-7339966 Msa0834320:CDS 40.0%
! TCAAGTGGATGGGGATATTT+TGG + chr5_4:7339957-7339976 Msa0834320:CDS 40.0%
AGCTTCAAAAGTGGAATTGG+TGG + chr5_4:7339990-7340009 Msa0834320:CDS 40.0%
GCTTCAAAAGTGGAATTGGT+GGG + chr5_4:7339991-7340010 Msa0834320:CDS 40.0%
TGAAGACTGTAGCTTGAGAA+AGG + chr5_4:7340044-7340063 Msa0834320:CDS 40.0%
CAATTGATGAGATGAGACCA+TGG - chr5_4:7340076-7340095 None:intergenic 40.0%
CATGGTCTCATCTCATCAAT+TGG + chr5_4:7340074-7340093 Msa0834320:CDS 40.0%
GAGTCTACTTTGGCAAATGA+CGG + chr5_4:7340231-7340250 Msa0834320:CDS 40.0%
CGGTATGGAAACTTCAGATA+TGG + chr5_4:7340275-7340294 Msa0834320:CDS 40.0%
!!! AACGCTGCAACTTTTTTACG+AGG - chr5_4:7340468-7340487 None:intergenic 40.0%
!! AGCTGATTTTGAAGGGAATG+CGG + chr5_4:7340635-7340654 Msa0834320:CDS 40.0%
ACCATCTACTGAGATGAGAT+TGG + chr5_4:7340680-7340699 Msa0834320:CDS 40.0%
ATGAACATCGTTAAGGTCGA+GGG + chr5_4:7340738-7340757 Msa0834320:CDS 40.0%
GAAAGTAGTGCTAGGTTTGA+TGG + chr5_4:7340824-7340843 Msa0834320:CDS 40.0%
GAACAAATATCAGATCCCCA+AGG - chr5_4:7340864-7340883 None:intergenic 40.0%
!! AGTTGATTTTTATGCCCACC+TGG + chr5_4:7340938-7340957 Msa0834320:CDS 40.0%
!!! CTCTTTTCTTTTTCAACGGC+TGG - chr5_4:7341016-7341035 None:intergenic 40.0%
CATGGGTCAATTAGTAACAC+GGG + chr5_4:7341055-7341074 Msa0834320:CDS 40.0%
TTCTACAAACAGCTTGGAAC+AGG - chr5_4:7341235-7341254 None:intergenic 40.0%
! TAGAAAGCTTTTGCAGGAAG+CGG + chr5_4:7341250-7341269 Msa0834320:CDS 40.0%
AGGGAGCTATGTTAATGAAG+GGG + chr5_4:7341346-7341365 Msa0834320:CDS 40.0%
TAATGAAGGGGAGAAGATCA+TGG + chr5_4:7341358-7341377 Msa0834320:CDS 40.0%
AATGAAGGGGAGAAGATCAT+GGG + chr5_4:7341359-7341378 Msa0834320:CDS 40.0%
AATCTATACCACCCTGAATC+TGG - chr5_4:7341457-7341476 None:intergenic 40.0%
! GCAACTAGTATTGTTGCTTC+CGG + chr5_4:7341503-7341522 Msa0834320:CDS 40.0%
! CAACTAGTATTGTTGCTTCC+GGG + chr5_4:7341504-7341523 Msa0834320:CDS 40.0%
! AACTAGTATTGTTGCTTCCG+GGG + chr5_4:7341505-7341524 Msa0834320:CDS 40.0%
CAGAAGATCAGAAGCTTGAA+CGG + chr5_4:7341609-7341628 Msa0834320:CDS 40.0%
AGAAGATCAGAAGCTTGAAC+GGG + chr5_4:7341610-7341629 Msa0834320:CDS 40.0%
!! TGCTTTGAAGAATAGTAGCG+AGG + chr5_4:7341640-7341659 Msa0834320:CDS 40.0%
CGAGGTCAAGAATTCTGTTA+GGG + chr5_4:7341658-7341677 Msa0834320:CDS 40.0%
GAATTCTGTTAGGGTGATAC+GGG + chr5_4:7341667-7341686 Msa0834320:CDS 40.0%
AATTCTGTTAGGGTGATACG+GGG + chr5_4:7341668-7341687 Msa0834320:CDS 40.0%
TGAAGTTGAGTCATATTGGC+AGG + chr5_4:7341742-7341761 Msa0834320:CDS 40.0%
TGAGTCATATTGGCAGGATA+TGG + chr5_4:7341748-7341767 Msa0834320:CDS 40.0%
GAGTCATATTGGCAGGATAT+GGG + chr5_4:7341749-7341768 Msa0834320:CDS 40.0%
AGTCATATTGGCAGGATATG+GGG + chr5_4:7341750-7341769 Msa0834320:CDS 40.0%
TTATAAACCAGCTTCCCATG+TGG - chr5_4:7341776-7341795 None:intergenic 40.0%
CGCGTTGAAGATATTTCCTA+CGG + chr5_4:7341884-7341903 Msa0834320:CDS 40.0%
GCGTTGAAGATATTTCCTAC+GGG + chr5_4:7341885-7341904 Msa0834320:CDS 40.0%
ATGGTGTTCACAGCACATAT+GGG - chr5_4:7341923-7341942 None:intergenic 40.0%
TATGGTGTTCACAGCACATA+TGG - chr5_4:7341924-7341943 None:intergenic 40.0%
GGGACAATATTGCAACAATC+AGG - chr5_4:7341995-7342014 None:intergenic 40.0%
TGCAATATTGTCCCTCCAAA+AGG + chr5_4:7342001-7342020 Msa0834320:CDS 40.0%
! GTACAATTACAGCCTTTTGG+AGG - chr5_4:7342016-7342035 None:intergenic 40.0%
GTACACAAGAACATTTCTCG+TGG - chr5_4:7342054-7342073 None:intergenic 40.0%
CTTGTGTACTCAAAAATGGG+GGG + chr5_4:7342065-7342084 Msa0834320:CDS 40.0%
TTGTGTACTCAAAAATGGGG+GGG + chr5_4:7342066-7342085 Msa0834320:CDS 40.0%
AAAACCAAGTCAATGGGATG+GGG + chr5_4:7342226-7342245 Msa0834320:CDS 40.0%
GATAAAACTTCCAGAAGGGA+TGG - chr5_4:7342269-7342288 None:intergenic 40.0%
AAGGAAGCTGAACAAAGAAC+TGG + chr5_4:7342319-7342338 Msa0834320:CDS 40.0%
ACATTCTGGGCATAGAGATT+GGG - chr5_4:7342526-7342545 None:intergenic 40.0%
GGTGATCATAAAGGACATTC+TGG - chr5_4:7342540-7342559 None:intergenic 40.0%
GCAGCAAATAACATGACATG+AGG - chr5_4:7342577-7342596 None:intergenic 40.0%
!! ATACTGCTTTTGTGGTTCTG+TGG + chr5_4:7342687-7342706 Msa0834320:CDS 40.0%
GAATTCGGAGCCATCAATGT+CGG + chr5_4:7339468-7339487 Msa0834320:CDS 45.0%
AGAATTAGGGAAGCCAGTGA+TGG + chr5_4:7339513-7339532 Msa0834320:CDS 45.0%
GAGTCTCCATTTACCATCAC+TGG - chr5_4:7339529-7339548 None:intergenic 45.0%
CAACTATTGTTGATCCGCCT+AGG + chr5_4:7339548-7339567 Msa0834320:CDS 45.0%
ACTTTCCGACGCTTAAACCT+AGG - chr5_4:7339568-7339587 None:intergenic 45.0%
! CGTGATTTTCCGGAAGAATG+TGG + chr5_4:7339598-7339617 Msa0834320:CDS 45.0%
!! ACGAGTGTTGAGGTTAAGAG+TGG + chr5_4:7339643-7339662 Msa0834320:CDS 45.0%
AGTGGTGAAGATTTAGGTGG+TGG + chr5_4:7339661-7339680 Msa0834320:CDS 45.0%
! GATTTAGGTGGTGGTGATTC+GGG + chr5_4:7339670-7339689 Msa0834320:CDS 45.0%
TGATAGTCCCAACGACGAAA+AGG + chr5_4:7339699-7339718 Msa0834320:CDS 45.0%
! TGAGGATCCTTTTCGTCGTT+GGG - chr5_4:7339709-7339728 None:intergenic 45.0%
! TTGAGGATCCTTTTCGTCGT+TGG - chr5_4:7339710-7339729 None:intergenic 45.0%
TGGCTGTAGTTTGAAGAAGG+AGG + chr5_4:7339783-7339802 Msa0834320:CDS 45.0%
TTTGAAGAAGGAGGATCCTG+TGG + chr5_4:7339792-7339811 Msa0834320:CDS 45.0%
! CACTTTTGCAGGTTCATCGT+TGG - chr5_4:7339851-7339870 None:intergenic 45.0%
CAACGATGAACCTGCAAAAG+TGG + chr5_4:7339849-7339868 Msa0834320:CDS 45.0%
! ACCTGCAAAAGTGGTATTGG+TGG + chr5_4:7339858-7339877 Msa0834320:CDS 45.0%
!! CCTGCAAAAGTGGTATTGGT+GGG + chr5_4:7339859-7339878 Msa0834320:CDS 45.0%
ACTTGATGAGATGAGACCAC+AGG - chr5_4:7339943-7339962 None:intergenic 45.0%
TGTGGTCTCATCTCATCAAG+TGG + chr5_4:7339942-7339961 Msa0834320:CDS 45.0%
GTCTCATCTCATCAAGTGGA+TGG + chr5_4:7339946-7339965 Msa0834320:CDS 45.0%
CTCATCTCATCAAGTGGATG+GGG + chr5_4:7339948-7339967 Msa0834320:CDS 45.0%
! AAAAGTGGAATTGGTGGGCA+TGG + chr5_4:7339996-7340015 Msa0834320:CDS 45.0%
GGAAGCTGTGGATATGGAAT+TGG + chr5_4:7340017-7340036 Msa0834320:CDS 45.0%
CTTGAGAAAGGAAGATCCCA+TGG + chr5_4:7340056-7340075 Msa0834320:CDS 45.0%
! AAAACTGACATTGGTGGGCA+TGG + chr5_4:7340128-7340147 Msa0834320:CDS 45.0%
!!! GCTGCAACTTTTTTACGAGG+AGG - chr5_4:7340465-7340484 None:intergenic 45.0%
GCCAATCTCATCTCAGTAGA+TGG - chr5_4:7340684-7340703 None:intergenic 45.0%
TACTGAGATGAGATTGGCAC+TGG + chr5_4:7340686-7340705 Msa0834320:CDS 45.0%
! GGCACTGGATAATCATCATC+AGG + chr5_4:7340701-7340720 Msa0834320:CDS 45.0%
CATGAACATCGTTAAGGTCG+AGG + chr5_4:7340737-7340756 Msa0834320:CDS 45.0%
AGTAGTTTGAAGGTCTCACC+AGG + chr5_4:7340798-7340817 Msa0834320:CDS 45.0%
TCTGTACCACCAATGGATGT+TGG - chr5_4:7340900-7340919 None:intergenic 45.0%
! ATTTTTATGCCCACCTGGAC+AGG + chr5_4:7340943-7340962 Msa0834320:CDS 45.0%
!!! AGTTTTAGACCTGTCCAGGT+GGG - chr5_4:7340955-7340974 None:intergenic 45.0%
AAAACTGCGACCAAGTCCAA+AGG + chr5_4:7340969-7340988 Msa0834320:CDS 45.0%
!! AAAAGTGTCCCAAAACCACG+TGG + chr5_4:7341119-7341138 Msa0834320:CDS 45.0%
AAGATCATGGGATCTGTTCC+TGG + chr5_4:7341371-7341390 Msa0834320:CDS 45.0%
AGATCATGGGATCTGTTCCT+GGG + chr5_4:7341372-7341391 Msa0834320:CDS 45.0%
! ACTAGTATTGTTGCTTCCGG+GGG + chr5_4:7341506-7341525 Msa0834320:CDS 45.0%
TTGATATATACAGGGCAGGG+TGG + chr5_4:7341560-7341579 Msa0834320:CDS 45.0%
CGTTCAAGCTTCTGATCTTC+TGG - chr5_4:7341611-7341630 None:intergenic 45.0%
GAAGATCAGAAGCTTGAACG+GGG + chr5_4:7341611-7341630 Msa0834320:CDS 45.0%
GCGAGGTCAAGAATTCTGTT+AGG + chr5_4:7341657-7341676 Msa0834320:CDS 45.0%
! GGGAATTTTCTCTTTCCCGT+AGG - chr5_4:7341903-7341922 None:intergenic 45.0%
AAGCCTCTAGTCTATGAGTG+TGG + chr5_4:7342127-7342146 Msa0834320:CDS 45.0%
AGCCTCTAGTCTATGAGTGT+GGG + chr5_4:7342128-7342147 Msa0834320:CDS 45.0%
TCCTTGAATTCCATCCCTTC+TGG + chr5_4:7342256-7342275 Msa0834320:CDS 45.0%
TCCAGAAGGGATGGAATTCA+AGG - chr5_4:7342260-7342279 None:intergenic 45.0%
TTGAGTGCGAATCTGGCAAA+AGG - chr5_4:7342414-7342433 None:intergenic 45.0%
CTTGAACTTGAGTGCGAATC+TGG - chr5_4:7342421-7342440 None:intergenic 45.0%
ATTCTGGGCATAGAGATTGG+GGG - chr5_4:7342524-7342543 None:intergenic 45.0%
CATTCTGGGCATAGAGATTG+GGG - chr5_4:7342525-7342544 None:intergenic 45.0%
GACATTCTGGGCATAGAGAT+TGG - chr5_4:7342527-7342546 None:intergenic 45.0%
TCGTAAGTCAGCTCTTGCAA+GGG - chr5_4:7342613-7342632 None:intergenic 45.0%
ATCGTAAGTCAGCTCTTGCA+AGG - chr5_4:7342614-7342633 None:intergenic 45.0%
GATCAAGTTCGTGATTCCGA+TGG + chr5_4:7342649-7342668 Msa0834320:CDS 45.0%
! TGTGGTTCTGTGGAATGTAC+TGG + chr5_4:7342697-7342716 Msa0834320:CDS 45.0%
! GTTCTGTGGAATGTACTGGT+AGG + chr5_4:7342701-7342720 Msa0834320:CDS 45.0%
GGGAAGCCAGTGATGGTAAA+TGG + chr5_4:7339520-7339539 Msa0834320:CDS 50.0%
ATCCGCCTAGGTTTAAGCGT+CGG + chr5_4:7339560-7339579 Msa0834320:CDS 50.0%
TTCCGACGCTTAAACCTAGG+CGG - chr5_4:7339565-7339584 None:intergenic 50.0%
CCAAACGGTCCACATTCTTC+CGG - chr5_4:7339610-7339629 None:intergenic 50.0%
GTACCGTCAGCAGAACCAAA+CGG - chr5_4:7339625-7339644 None:intergenic 50.0%
!! CCCACCAATACCACTTTTGC+AGG - chr5_4:7339862-7339881 None:intergenic 50.0%
! ATTGGTGGGCGTAGAAGCTA+TGG + chr5_4:7339873-7339892 Msa0834320:CDS 50.0%
! ATTGGTGGGCATGGAGACTT+TGG + chr5_4:7340137-7340156 Msa0834320:CDS 50.0%
GGAGACTTTGGATGCGGAAT+TGG + chr5_4:7340149-7340168 Msa0834320:CDS 50.0%
!! AAATGACGGACCTGCAGAAC+TGG + chr5_4:7340245-7340264 Msa0834320:CDS 50.0%
!! AGAACTGGCATTGGTCGGTA+TGG + chr5_4:7340260-7340279 Msa0834320:CDS 50.0%
TGGTTCCGGTGCTTGTATGA+AGG + chr5_4:7340419-7340438 Msa0834320:CDS 50.0%
TTCCGGTGCTTGTATGAAGG+AGG + chr5_4:7340422-7340441 Msa0834320:CDS 50.0%
AGCCTCCTTCATACAAGCAC+CGG - chr5_4:7340427-7340446 None:intergenic 50.0%
GCATTGCGTCCACATAAACG+TGG - chr5_4:7340501-7340520 None:intergenic 50.0%
CAGCCAGGATGAGTGTCTAA+AGG + chr5_4:7340530-7340549 Msa0834320:CDS 50.0%
GCTCCTTTAGACACTCATCC+TGG - chr5_4:7340536-7340555 None:intergenic 50.0%
TGGCCAAGTCAGAATGTCCT+TGG + chr5_4:7340844-7340863 Msa0834320:CDS 50.0%
GGCCAAGTCAGAATGTCCTT+GGG + chr5_4:7340845-7340864 Msa0834320:CDS 50.0%
GCCAAGTCAGAATGTCCTTG+GGG + chr5_4:7340846-7340865 Msa0834320:CDS 50.0%
TCCCCAAGGACATTCTGACT+TGG - chr5_4:7340850-7340869 None:intergenic 50.0%
CCTGTCATCTGTACCACCAA+TGG - chr5_4:7340907-7340926 None:intergenic 50.0%
! CCATTGGTGGTACAGATGAC+AGG + chr5_4:7340904-7340923 Msa0834320:CDS 50.0%
TGGTGGTACAGATGACAGGA+AGG + chr5_4:7340908-7340927 Msa0834320:CDS 50.0%
GGTGGTACAGATGACAGGAA+GGG + chr5_4:7340909-7340928 Msa0834320:CDS 50.0%
!!! CAGTTTTAGACCTGTCCAGG+TGG - chr5_4:7340956-7340975 None:intergenic 50.0%
!!! TCGCAGTTTTAGACCTGTCC+AGG - chr5_4:7340959-7340978 None:intergenic 50.0%
TGGTCATGAGAGTGACTCAG+TGG + chr5_4:7341181-7341200 Msa0834320:CDS 50.0%
GATCATGGGATCTGTTCCTG+GGG + chr5_4:7341373-7341392 Msa0834320:CDS 50.0%
TCTGTTCCTGGGGTTGAAGT+TGG + chr5_4:7341383-7341402 Msa0834320:CDS 50.0%
TCATCACCAACTTCAACCCC+AGG - chr5_4:7341392-7341411 None:intergenic 50.0%
TAAGTCATCAGCATAGCCCC+CGG - chr5_4:7341525-7341544 None:intergenic 50.0%
GATACGGGGATCTGAATCAG+CGG + chr5_4:7341682-7341701 Msa0834320:CDS 50.0%
GTTTCGCTTGCGAAGAAAGC+CGG + chr5_4:7341796-7341815 Msa0834320:CDS 50.0%
TTTCGCTTGCGAAGAAAGCC+GGG + chr5_4:7341797-7341816 Msa0834320:CDS 50.0%
! TCAACCAGAGCTTGCTTGGA+AGG + chr5_4:7341820-7341839 Msa0834320:CDS 50.0%
AGTACCTTCCAAGCAAGCTC+TGG - chr5_4:7341827-7341846 None:intergenic 50.0%
AGGGGGGTTCTCTTCATCTA+TGG - chr5_4:7341942-7341961 None:intergenic 50.0%
!! GTTGGAGGGCACTTGCATTT+AGG - chr5_4:7342154-7342173 None:intergenic 50.0%
! TACACCCCATCCCATTGACT+TGG - chr5_4:7342233-7342252 None:intergenic 50.0%
TGGAGAGGTTCTTGAGGACA+AGG + chr5_4:7342300-7342319 Msa0834320:CDS 50.0%
ACTATCGATGCCGCTCAGTT+CGG + chr5_4:7342466-7342485 Msa0834320:CDS 50.0%
CCCTACATTACCGAACTGAG+CGG - chr5_4:7342479-7342498 None:intergenic 50.0%
CCGCTCAGTTCGGTAATGTA+GGG + chr5_4:7342476-7342495 Msa0834320:CDS 50.0%
AGAGATTGGGGGAGCAACTA+TGG - chr5_4:7342513-7342532 None:intergenic 50.0%
CATGAGGAACCCTGTTGTCA+TGG - chr5_4:7342561-7342580 None:intergenic 50.0%
TAAGTCAGCTCTTGCAAGGG+AGG - chr5_4:7342610-7342629 None:intergenic 50.0%
CCGGAAGAATGTGGACCGTT+TGG + chr5_4:7339607-7339626 Msa0834320:CDS 55.0%
!! GGACCGTTTGGTTCTGCTGA+CGG + chr5_4:7339619-7339638 Msa0834320:CDS 55.0%
! TGCTGACGGTACGAGTGTTG+AGG + chr5_4:7339633-7339652 Msa0834320:CDS 55.0%
! ATTGGTGGGCATGGAAGCTG+TGG + chr5_4:7340005-7340024 Msa0834320:CDS 55.0%
GGGCATGGAAGCTGTGGATA+TGG + chr5_4:7340011-7340030 Msa0834320:CDS 55.0%
GGGCATGGAGACTTTGGATG+CGG + chr5_4:7340143-7340162 Msa0834320:CDS 55.0%
!! CCTGCAGAACTGGCATTGGT+CGG + chr5_4:7340255-7340274 Msa0834320:CDS 55.0%
GACATAGCTACCTCGCCAAC+TGG - chr5_4:7340360-7340379 None:intergenic 55.0%
ACACTCATCCTGGCTGAGAC+GGG - chr5_4:7340526-7340545 None:intergenic 55.0%
GACACTCATCCTGGCTGAGA+CGG - chr5_4:7340527-7340546 None:intergenic 55.0%
AGGGAATGCGGTCAAGAAGC+TGG + chr5_4:7340647-7340666 Msa0834320:CDS 55.0%
GTTTGAAGGTCTCACCAGGC+AGG + chr5_4:7340802-7340821 Msa0834320:CDS 55.0%
CCTAGCACTACTTTCCTGCC+TGG - chr5_4:7340819-7340838 None:intergenic 55.0%
CCAGGCAGGAAAGTAGTGCT+AGG + chr5_4:7340816-7340835 Msa0834320:CDS 55.0%
ATGAGAGTGACTCAGTGGCC+CGG + chr5_4:7341186-7341205 Msa0834320:CDS 55.0%
CAGTGGCCCGGAATAAAGTG+AGG + chr5_4:7341198-7341217 Msa0834320:CDS 55.0%
TGGCCTTCATCGCCAGATTC+AGG + chr5_4:7341442-7341461 Msa0834320:CDS 55.0%
GGCCTTCATCGCCAGATTCA+GGG + chr5_4:7341443-7341462 Msa0834320:CDS 55.0%
CACCCTGAATCTGGCGATGA+AGG - chr5_4:7341448-7341467 None:intergenic 55.0%
CTTCATCGCCAGATTCAGGG+TGG + chr5_4:7341446-7341465 Msa0834320:CDS 55.0%
! CAAGCAAGCTCTGGTTGACC+CGG - chr5_4:7341818-7341837 None:intergenic 55.0%
GGCCCACACTCATAGACTAG+AGG - chr5_4:7342133-7342152 None:intergenic 55.0%
GCCGCTCAGTTCGGTAATGT+AGG + chr5_4:7342475-7342494 Msa0834320:CDS 55.0%
CGGACCTGCAGAACTGGCAT+TGG + chr5_4:7340251-7340270 Msa0834320:CDS 60.0%
CCGACCAATGCCAGTTCTGC+AGG - chr5_4:7340258-7340277 None:intergenic 60.0%
!! TCAGAGGCATCGGCTCCAGT+TGG + chr5_4:7340342-7340361 Msa0834320:CDS 60.0%
CACTCATCCTGGCTGAGACG+GGG - chr5_4:7340525-7340544 None:intergenic 60.0%
CGGGGATCTGAATCAGCGGA+TGG + chr5_4:7341686-7341705 Msa0834320:CDS 60.0%
TGGCAGGATATGGGGCCACA+TGG + chr5_4:7341758-7341777 Msa0834320:CDS 60.0%
GGCAGGATATGGGGCCACAT+GGG + chr5_4:7341759-7341778 Msa0834320:CDS 60.0%
TATGGGGCCACATGGGAAGC+TGG + chr5_4:7341766-7341785 Msa0834320:CDS 60.0%
! CGGGTCAACCAGAGCTTGCT+TGG + chr5_4:7341816-7341835 Msa0834320:CDS 60.0%
CAATGCTCCCCGTCTCAGCC+AGG + chr5_4:7340515-7340534 Msa0834320:CDS 65.0%
!! GGCATCGGCTCCAGTTGGCG+AGG + chr5_4:7340347-7340366 Msa0834320:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 7339466 7342732 7339466 ID=Msa0834320;Name=Msa0834320
chr5_4 mRNA 7339466 7342732 7339466 ID=Msa0834320-mRNA-1;Parent=Msa0834320;Name=Msa0834320-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|1088
chr5_4 exon 7339466 7342732 7339466 ID=Msa0834320-mRNA-1:exon:3264;Parent=Msa0834320-mRNA-1
chr5_4 CDS 7339466 7342732 7339466 ID=Msa0834320-mRNA-1:cds;Parent=Msa0834320-mRNA-1
Gene Sequence

>Msa0834320

ATGAATTCGGAGCCATCAATGTCGGTTTGTGATGAACATTCTGAAGAAGAATTAGGGAAGCCAGTGATGGTAAATGGAGACTCAACTATTGTTGATCCGCCTAGGTTTAAGCGTCGGAAAGTTTCTGCTGTTCGTGATTTTCCGGAAGAATGTGGACCGTTTGGTTCTGCTGACGGTACGAGTGTTGAGGTTAAGAGTGGTGAAGATTTAGGTGGTGGTGATTCGGGTGAAGCTGATAGTCCCAACGACGAAAAGGATCCTCAAAATTTTGAGTTCAATGAAGATTTGTTTGTTGCAGACACTGTTGAACAAACAAGTGGCTGTAGTTTGAAGAAGGAGGATCCTGTGGTCTTATCTGATCAAGTGGATGTGGGTAGTTTTGCCAACGATGAACCTGCAAAAGTGGTATTGGTGGGCGTAGAAGCTATGGATATTAGTTTTGAAACTGAAGACTGTAGCTTGAAAAAGGAAGATCCTGTGGTCTCATCTCATCAAGTGGATGGGGATATTTTGGTTAACGATGAAGCTTCAAAAGTGGAATTGGTGGGCATGGAAGCTGTGGATATGGAATTGGAAACTGAAGACTGTAGCTTGAGAAAGGAAGATCCCATGGTCTCATCTCATCAATTGGATGTGCCTATTTTGGATAATAACGAAGATACAAAACTGACATTGGTGGGCATGGAGACTTTGGATGCGGAATTGGCAACTGAAAGCTGTAGTTTGAAGAACGAAAATGCAGCGATCTTATCTTATCAAATTGATGAGTCTACTTTGGCAAATGACGGACCTGCAGAACTGGCATTGGTCGGTATGGAAACTTCAGATATGGAATTTACAACAGAAGGCTCCGTAAAACAAGATTTATCTTATATATCAGAGGCATCGGCTCCAGTTGGCGAGGTAGCTATGTCTGATAACTCAAAATCCTCATTGTCCAATATCAATATAGGTGGTTCCGGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATCCTCCTCGTAAAAAAGTTGCAGCGTTAAGAGATTTTCCACGTTTATGTGGACGCAATGCTCCCCGTCTCAGCCAGGATGAGTGTCTAAAGGAGCTCGCTTCTTTGAAAGAAGTTGCAGCTACTGACCTACAAGAAGCAGAAAATAACAAAAGAAAGTTTGCCAACTTTGTTGAAGCTGATTTTGAAGGGAATGCGGTCAAGAAGCTGGATGTAGCTGAACCATCTACTGAGATGAGATTGGCACTGGATAATCATCATCAGGTTAAAGTGGAAAACATGAACATCGTTAAGGTCGAGGGAACATCAGAGCTAGATATTGATTACCCAGAACTCGAAAGTAGTTTGAAGGTCTCACCAGGCAGGAAAGTAGTGCTAGGTTTGATGGCCAAGTCAGAATGTCCTTGGGGATCTGATATTTGTTCCCCCAAATTTAAACCAACATCCATTGGTGGTACAGATGACAGGAAGGGAAAGAAAGTTGATTTTTATGCCCACCTGGACAGGTCTAAAACTGCGACCAAGTCCAAAGGTGTACTAAATCATTCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATGGGTCAATTAGTAACACGGGAGAAGAATTCTCTAGATCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAACCACGTGGTTATGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTAAGTGGTCATGAGAGTGACTCAGTGGCCCGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCAAGCTGTTTGTAGAAAGCTTTTGCAGGAAGCGGAAGCAAAACCAAAGTCAAATGTGAAAGAATCAAAGAGGGTTGATTTACAAGCTTCAAAAATACTTAAGGAAAAAGGGAGCTATGTTAATGAAGGGGAGAAGATCATGGGATCTGTTCCTGGGGTTGAAGTTGGTGATGAATTTCAATACAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATATGAAGCAAAAAAACAAGGTCCTTGCAACTAGTATTGTTGCTTCCGGGGGCTATGCTGATGACTTAGATAATGCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGCAATCTTGCTTTGAAGAATAGTAGCGAGGTCAAGAATTCTGTTAGGGTGATACGGGGATCTGAATCAGCGGATGGAAAAAGCAAGATATATGTTTACGATGGACTCTATGAAGTTGAGTCATATTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAAAGCCGGGTCAACCAGAGCTTGCTTGGAAGGTACTGAAGAAATCTAAAAAGTTCAAAAAAAGAGAAGGTGTACGCGTTGAAGATATTTCCTACGGGAAAGAGAAAATTCCCATATGTGCTGTGAACACCATAGATGAAGAGAACCCCCCTCCATTTAAATACATAACTAAGATGATGTATCCTGATTGTTGCAATATTGTCCCTCCAAAAGGCTGTAATTGTACTAATGGATGCTCTGACCACGAGAAATGTTCTTGTGTACTCAAAAATGGGGGGGAGATTCCATTTAATCATAATGGAGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGGCCTAAATGCAAGTGCCCTCCAACTTGTTATAATAGAGTCAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAAGTCAATGGGATGGGGTGTAAGATCCTTGAATTCCATCCCTTCTGGAAGTTTTATCTGTGAATATATTGGAGAGGTTCTTGAGGACAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACAAAAACAACAGTAATCTTTGGGATGGACTTTCGAACCTTTTGCCAGATTCGCACTCAAGTTCAAGTGAAGTAGTGAATGATGTTGGCTTCACTATCGATGCCGCTCAGTTCGGTAATGTAGGGAGATTCATTAACCATAGTTGCTCCCCCAATCTCTATGCCCAGAATGTCCTTTATGATCACCATGACAACAGGGTTCCTCATGTCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGATTACAATTACACGATAGATCAAGTTCGTGATTCCGATGGCAATATCAAAAAGAAATACTGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>Msa0834320

MNSEPSMSVCDEHSEEELGKPVMVNGDSTIVDPPRFKRRKVSAVRDFPEECGPFGSADGTSVEVKSGEDLGGGDSGEADSPNDEKDPQNFEFNEDLFVADTVEQTSGCSLKKEDPVVLSDQVDVGSFANDEPAKVVLVGVEAMDISFETEDCSLKKEDPVVSSHQVDGDILVNDEASKVELVGMEAVDMELETEDCSLRKEDPMVSSHQLDVPILDNNEDTKLTLVGMETLDAELATESCSLKNENAAILSYQIDESTLANDGPAELALVGMETSDMEFTTEGSVKQDLSYISEASAPVGEVAMSDNSKSSLSNINIGGSGACMKEALTKRYPPRKKVAALRDFPRLCGRNAPRLSQDECLKELASLKEVAATDLQEAENNKRKFANFVEADFEGNAVKKLDVAEPSTEMRLALDNHHQVKVENMNIVKVEGTSELDIDYPELESSLKVSPGRKVVLGLMAKSECPWGSDICSPKFKPTSIGGTDDRKGKKVDFYAHLDRSKTATKSKGVLNHSGHQPLKKKRENSSSDDMGQLVTREKNSLDPNENNKHFKSVPKPRGYVNVFPLGRSNLSGHESDSVARNKVRKTLRLFQAVCRKLLQEAEAKPKSNVKESKRVDLQASKILKEKGSYVNEGEKIMGSVPGVEVGDEFQYRIELNIIGLHRQIQGGIDYMKQKNKVLATSIVASGGYADDLDNADVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGSESADGKSKIYVYDGLYEVESYWQDMGPHGKLVYKFRLRRKPGQPELAWKVLKKSKKFKKREGVRVEDISYGKEKIPICAVNTIDEENPPPFKYITKMMYPDCCNIVPPKGCNCTNGCSDHEKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPPTCYNRVSQLGINIQLEIFKTKSMGWGVRSLNSIPSGSFICEYIGEVLEDKEAEQRTGNDEYLFDIGNNKNNSNLWDGLSNLLPDSHSSSSEVVNDVGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDNRVPHVMLFAAENIPPLQELTYDYNYTIDQVRDSDGNIKKKYCFCGSVECTGRLY*