AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1357430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1357430 MtrunA17_Chr4g0057141 98.975 488 4 1 1 487 157 644 0.0 1011
Msa1357430 MtrunA17_Chr1g0185891 97.541 488 11 1 1 487 96 583 0.0 1001
Msa1357430 MtrunA17_Chr8g0361561 33.226 310 193 4 185 484 107 412 2.96e-52 182
Msa1357430 MtrunA17_Chr4g0067151 27.660 329 211 10 173 487 6 321 6.66e-34 130
Msa1357430 MtrunA17_Chr1g0185501 25.163 306 216 8 186 487 16 312 1.02e-29 118
Msa1357430 MtrunA17_Chr7g0253861 26.730 318 220 9 171 484 32 340 9.07e-27 110
Msa1357430 MtrunA17_Chr8g0383711 27.832 309 204 10 185 489 6 299 1.96e-25 106
Msa1357430 MtrunA17_Chr4g0058091 25.962 312 206 8 185 487 218 513 4.37e-25 108
Msa1357430 MtrunA17_Chr3g0116561 26.471 306 214 8 184 487 212 508 3.36e-24 105
Msa1357430 MtrunA17_Chr7g0246741 26.132 287 188 9 195 463 367 647 3.88e-19 90.9
Msa1357430 MtrunA17_Chr2g0295791 26.299 308 195 12 194 487 167 456 6.56e-19 89.4
Msa1357430 MtrunA17_Chr6g0448921 30.380 158 102 5 188 343 92 243 1.35e-16 82.8
Msa1357430 MtrunA17_Chr6g0448921 22.727 286 201 9 193 468 12 287 2.37e-14 75.9
Msa1357430 MtrunA17_Chr6g0448921 24.868 189 135 4 299 487 31 212 6.64e-13 71.2
Msa1357430 MtrunA17_Chr6g0448921 31.538 130 80 4 187 313 133 256 2.37e-11 66.2
Msa1357430 MtrunA17_Chr1g0183051 25.000 320 223 11 174 487 195 503 2.57e-16 81.6
Msa1357430 MtrunA17_Chr1g0200901 25.329 304 204 14 190 487 73 359 1.86e-15 78.2
Msa1357430 MtrunA17_Chr1g0176241 23.622 381 201 11 188 487 110 481 2.12e-15 78.6
Msa1357430 MtrunA17_Chr5g0442391 21.317 319 238 8 179 492 243 553 4.68e-15 77.8
Msa1357430 MtrunA17_Chr2g0281451 29.545 176 114 7 188 361 91 258 4.69e-15 78.2
Msa1357430 MtrunA17_Chr2g0281451 23.810 189 137 4 299 487 30 211 2.82e-12 69.3
Msa1357430 MtrunA17_Chr2g0281451 22.867 293 198 10 190 468 8 286 2.32e-11 66.6
Msa1357430 MtrunA17_Chr3g0099061 23.824 319 217 11 186 487 202 511 1.39e-14 76.3
Msa1357430 MtrunA17_Chr3g0144511 24.127 315 215 10 192 487 60 369 7.82e-14 73.2
Msa1357430 MtrunA17_Chr8g0361541 38.272 81 50 0 376 456 16 96 8.18e-14 68.2
Msa1357430 MtrunA17_Chr8g0392701 21.014 276 193 9 185 444 54 320 5.46e-13 70.1
Msa1357430 MtrunA17_Chr4g0069701 23.125 320 211 14 188 487 347 651 7.47e-13 71.2
Msa1357430 MtrunA17_Chr4g0059031 21.683 309 215 11 201 491 316 615 3.65e-12 68.9
Msa1357430 MtrunA17_Chr2g0308391 21.429 322 228 8 186 487 115 431 1.97e-11 65.9
Msa1357430 MtrunA17_Chr1g0162961 24.339 189 117 5 188 354 109 293 4.88e-11 64.7
Msa1357430 MtrunA17_Chr2g0322171 28.125 160 96 6 213 356 161 317 8.97e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1357430 AT1G10580.1 81.314 487 86 2 1 487 91 572 0.0 820
Msa1357430 AT5G54520.1 32.915 319 204 3 177 487 140 456 4.15e-55 191
Msa1357430 AT3G49660.1 25.641 312 214 9 184 487 11 312 1.83e-30 121
Msa1357430 AT3G49660.1 28.767 219 145 6 189 402 105 317 1.31e-25 107
Msa1357430 AT5G64730.1 27.508 309 201 11 185 487 6 297 3.06e-27 111
Msa1357430 AT2G43770.1 26.460 291 206 7 194 481 50 335 4.90e-26 109
Msa1357430 AT4G15900.1 29.967 307 183 12 195 487 174 462 1.82e-25 109
Msa1357430 AT4G02730.1 24.595 309 215 10 186 487 32 329 1.46e-24 104
Msa1357430 AT3G16650.1 28.990 307 185 13 195 487 168 455 1.90e-21 97.4
Msa1357430 AT5G50230.1 24.038 312 212 8 185 487 213 508 2.76e-20 94.4
Msa1357430 AT5G08560.1 23.453 307 222 8 185 487 262 559 1.76e-17 85.9
Msa1357430 AT5G08560.2 23.453 307 222 8 185 487 262 559 1.76e-17 85.9
Msa1357430 AT5G08560.3 23.453 307 222 8 185 487 262 559 1.76e-17 85.9
Msa1357430 AT1G15440.2 23.203 306 215 7 195 484 347 648 5.94e-17 84.7
Msa1357430 AT5G43920.1 24.688 320 218 12 181 487 204 513 7.22e-17 83.6
Msa1357430 AT1G15440.1 23.203 306 215 7 195 484 387 688 8.43e-17 84.0
Msa1357430 AT5G23430.3 23.656 279 189 10 190 464 9 267 1.11e-16 83.6
Msa1357430 AT5G23430.3 30.000 150 97 5 188 335 92 235 2.77e-14 76.3
Msa1357430 AT5G23430.3 25.000 192 131 4 299 487 31 212 2.47e-12 70.1
Msa1357430 AT5G23430.3 29.921 127 86 3 187 313 133 256 7.03e-11 65.5
Msa1357430 AT5G23430.2 23.656 279 189 10 190 464 9 267 1.11e-16 83.6
Msa1357430 AT5G23430.2 30.000 150 97 5 188 335 92 235 2.77e-14 76.3
Msa1357430 AT5G23430.2 25.000 192 131 4 299 487 31 212 2.47e-12 70.1
Msa1357430 AT5G23430.2 29.921 127 86 3 187 313 133 256 7.03e-11 65.5
Msa1357430 AT5G23430.1 23.656 279 189 10 190 464 9 267 1.11e-16 83.6
Msa1357430 AT5G23430.1 30.000 150 97 5 188 335 92 235 2.79e-14 76.3
Msa1357430 AT5G23430.1 25.000 192 131 4 299 487 31 212 2.34e-12 70.1
Msa1357430 AT5G23430.1 29.921 127 86 3 187 313 133 256 7.04e-11 65.5
Msa1357430 AT1G61210.3 31.429 175 112 6 188 361 91 258 2.35e-16 82.8
Msa1357430 AT1G61210.3 25.547 274 180 9 195 464 13 266 9.00e-15 77.8
Msa1357430 AT1G61210.3 31.008 129 82 5 187 313 132 255 3.15e-11 66.6
Msa1357430 AT5G08390.1 24.188 277 190 9 190 464 9 267 2.91e-16 82.4
Msa1357430 AT5G08390.1 32.000 150 94 5 188 335 92 235 5.38e-15 78.6
Msa1357430 AT5G08390.1 25.000 192 131 4 299 487 31 212 1.89e-12 70.5
Msa1357430 AT5G08390.1 32.283 127 83 3 187 313 133 256 5.60e-12 68.9
Msa1357430 AT1G61210.1 31.429 175 112 6 188 361 91 258 3.90e-16 82.0
Msa1357430 AT1G61210.1 25.547 274 180 9 195 464 13 266 2.15e-14 76.6
Msa1357430 AT1G61210.2 31.429 175 112 6 188 361 91 258 3.97e-16 82.0
Msa1357430 AT1G61210.2 25.547 274 180 9 195 464 13 266 2.24e-14 76.6
Msa1357430 AT1G11160.4 24.742 291 195 9 190 468 8 286 3.80e-15 79.0
Msa1357430 AT1G11160.4 27.684 177 120 6 188 363 91 260 1.63e-14 77.0
Msa1357430 AT1G11160.4 25.397 189 134 4 299 487 30 211 5.44e-14 75.5
Msa1357430 AT1G11160.2 24.742 291 195 9 190 468 8 286 4.18e-15 79.0
Msa1357430 AT1G11160.2 27.684 177 120 6 188 363 91 260 1.76e-14 77.0
Msa1357430 AT1G11160.2 25.397 189 134 4 299 487 30 211 6.52e-14 75.1
Msa1357430 AT1G11160.1 24.742 291 195 9 190 468 8 286 4.41e-15 79.0
Msa1357430 AT1G11160.1 27.684 177 120 6 188 363 91 260 1.99e-14 76.6
Msa1357430 AT1G11160.1 25.397 189 134 4 299 487 30 211 5.88e-14 75.1
Msa1357430 AT1G11160.3 27.684 177 120 6 188 363 49 218 1.52e-14 77.0
Msa1357430 AT1G11160.3 26.543 162 112 5 326 487 15 169 5.70e-12 68.9
Msa1357430 AT1G11160.3 25.000 248 163 8 233 468 8 244 9.26e-11 65.1
Msa1357430 AT1G11160.3 30.534 131 80 6 187 313 90 213 9.76e-11 65.1
Msa1357430 AT3G18130.1 24.535 269 178 10 194 444 60 321 5.55e-14 73.6
Msa1357430 AT3G18130.1 24.815 270 185 9 195 456 13 272 5.07e-12 67.4
Msa1357430 AT5G52820.1 24.497 298 204 10 194 487 191 471 2.31e-13 72.4
Msa1357430 AT1G48630.1 24.907 269 177 11 194 444 60 321 4.60e-13 70.5
Msa1357430 AT1G48630.1 24.542 273 188 9 192 456 10 272 2.23e-12 68.6
Msa1357430 AT5G16750.1 25.444 169 118 5 192 355 55 220 4.98e-13 72.0
Msa1357430 AT2G33340.2 25.591 254 173 9 188 435 255 498 1.25e-12 70.5
Msa1357430 AT2G33340.1 25.591 254 173 9 188 435 255 498 1.25e-12 70.5
Msa1357430 AT2G41500.1 23.320 253 178 7 239 487 253 493 1.60e-12 70.1
Msa1357430 AT2G41500.1 25.472 212 152 6 189 399 331 537 1.34e-11 67.4
Msa1357430 AT2G41500.2 23.320 253 178 7 239 487 253 493 1.60e-12 70.1
Msa1357430 AT2G41500.2 25.472 212 152 6 189 399 331 537 1.34e-11 67.4
Msa1357430 AT1G73720.1 24.451 319 214 12 186 487 201 509 3.07e-12 69.3
Msa1357430 AT3G21540.1 23.864 264 174 12 237 487 402 651 5.28e-12 68.9
Msa1357430 AT1G18080.1 22.695 282 161 7 192 465 10 242 7.55e-12 67.0
Msa1357430 AT1G18080.1 22.388 268 186 8 194 444 60 322 1.40e-11 66.2
Msa1357430 AT1G79990.1 22.460 187 141 3 213 397 72 256 9.73e-12 68.2
Msa1357430 AT1G79990.2 22.460 187 141 3 213 397 72 256 9.87e-12 68.2
Msa1357430 AT2G33340.3 27.011 174 117 6 188 356 255 423 2.00e-11 66.6
Msa1357430 AT5G60940.2 22.812 320 225 9 185 487 19 333 4.41e-11 64.7
Msa1357430 AT5G60940.1 22.812 320 225 9 185 487 111 425 8.79e-11 64.3

Find 150 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCTCTTCTTTCTTCTTA+AGG 0.216922 tig0016063:+97027 None:intergenic
GTGAGGGTAAGTGTTGGTTC+TGG 0.241552 tig0016063:-95946 Msa1357430:CDS
ACCCTACCTATGACCAACTA+TGG 0.277536 tig0016063:-97332 None:intergenic
ATTCTCTTCTTTCTTCTTAA+GGG 0.283276 tig0016063:+97028 None:intergenic
GGTGAGACGGGCCTTGGATG+GGG 0.301397 tig0016063:+97288 None:intergenic
CGCTTCACCCCAACGCGAAT+TGG 0.301825 tig0016063:-96126 Msa1357430:CDS
TGTTCAATGATGCCTGTTGC+TGG 0.303386 tig0016063:-92096 Msa1357430:exon
CAAGAGTATGATCAGCATTT+GGG 0.309524 tig0016063:-96295 Msa1357430:CDS
TGGATACTAAGGTTAAGATT+TGG 0.323671 tig0016063:-96603 Msa1357430:CDS
CTTGTTGATTATGTCTTCCT+TGG 0.324108 tig0016063:-92003 Msa1357430:three_prime_UTR
GGATACTAAGGTTAAGATTT+GGG 0.331103 tig0016063:-96602 Msa1357430:CDS
TGATAAGAATATTAAGTATT+GGG 0.340716 tig0016063:-96473 Msa1357430:CDS
GCGGCGAGCCAATTCGCGTT+GGG 0.343990 tig0016063:+96099 None:intergenic
CGATATAACCTGCCCTGTTT+CGG 0.352782 tig0016063:+96428 None:intergenic
TGAGGGTAAGTGTTGGTTCT+GGG 0.355149 tig0016063:-95945 Msa1357430:CDS
TGGGTCATTCCAAAGCTGTT+AGG 0.358107 tig0016063:-96543 Msa1357430:CDS
TCAAGAGTATGATCAGCATT+TGG 0.358810 tig0016063:-96296 Msa1357430:CDS
TCCCTCAGGGTATGGGAGTA+TGG 0.364907 tig0016063:-96208 Msa1357430:CDS
CAAAGAGATTGGTGCATACT+TGG 0.367144 tig0016063:-96699 Msa1357430:CDS
ACATTCTGTTTATCCTCATC+CGG 0.374087 tig0016063:+96363 None:intergenic
CCACTATGTTGCTACTCCTT+TGG 0.379138 tig0016063:+92031 None:intergenic
AAGTATTGGGATACCGAAAC+AGG 0.381659 tig0016063:-96460 Msa1357430:CDS
CAAAAGGGGTTTCTGCGATT+AGG 0.383880 tig0016063:-96666 Msa1357430:CDS
CAAGTATGCACCAATCTCTT+TGG 0.386596 tig0016063:+96681 None:intergenic
TTTGCTGGACACATTGTTGC+TGG 0.388967 tig0016063:-96025 Msa1357430:CDS
ACAAATATCCCTAACAGCTT+TGG 0.389574 tig0016063:+96515 None:intergenic
GGGTTAAGCTTCACAACATA+AGG 0.392453 tig0016063:+96384 None:intergenic
GTGAGACGGGCCTTGGATGG+GGG 0.393229 tig0016063:+97289 None:intergenic
GGGTGAGACGGGCCTTGGAT+GGG 0.394403 tig0016063:+97287 None:intergenic
AGAATCAAATGACCCGAATT+CGG 0.398493 tig0016063:+96618 None:intergenic
CGTAAGGGTGAGACGGGCCT+TGG 0.399519 tig0016063:+97282 None:intergenic
TTACTCGCCTTAGCATCTTT+CGG 0.401503 tig0016063:+96720 None:intergenic
TGCTACTTAGTTCCAGCAAC+AGG 0.405287 tig0016063:+92084 None:intergenic
GTAAGTGTTGGTTCTGGGAT+TGG 0.407813 tig0016063:-95940 Msa1357430:CDS
CGCGTTGGGGTGAAGCGAAA+TGG 0.409944 tig0016063:+96113 None:intergenic
GCAAAGTAGCGACGTGTGGC+TGG 0.411956 tig0016063:-95838 Msa1357430:CDS
ATGATAAGAATATTAAGTAT+TGG 0.420715 tig0016063:-96474 Msa1357430:CDS
TTGTGCTATAAATAAGAATC+TGG 0.429963 tig0016063:+96061 None:intergenic
TCTTCTTCTGTTCGCGGTGT+GGG 0.431476 tig0016063:+97063 None:intergenic
GGGATTATCAAGGTAGGTCT+TGG 0.431742 tig0016063:-96771 Msa1357430:CDS
CGCGGCGAGCCAATTCGCGT+TGG 0.432970 tig0016063:+96098 None:intergenic
ATGACAAGTCCCTCAGGGTA+TGG 0.434880 tig0016063:-96216 Msa1357430:CDS
GAGTCCTTGGGCTGGGAAGA+AGG 0.437077 tig0016063:-96938 Msa1357430:CDS
AATAACCACGCCTCAGAAGC+TGG 0.437350 tig0016063:+96954 None:intergenic
TTGGCTCGCCGCGCAGAGCT+TGG 0.439153 tig0016063:-96107 Msa1357430:CDS
CGGTTGCCAGTGGCATCCTC+TGG 0.441347 tig0016063:-95867 Msa1357430:CDS
AGGGTGAGACGGGCCTTGGA+TGG 0.442397 tig0016063:+97286 None:intergenic
TGAAGAATAAGAAGAGTCCT+TGG 0.443248 tig0016063:-96951 Msa1357430:CDS
CTCTTCTTCTGTTCGCGGTG+TGG 0.444110 tig0016063:+97062 None:intergenic
GTTCAGTGGGATATGAATAC+AGG 0.451594 tig0016063:-96328 Msa1357430:CDS
GGGTCATTCCAAAGCTGTTA+GGG 0.454301 tig0016063:-96542 Msa1357430:CDS
AGGTTTACAAGGAGAGTTAA+CGG 0.457451 tig0016063:-96914 Msa1357430:CDS
GTTATATCGACGTTCTCCAC+TGG 0.463024 tig0016063:-96433 Msa1357430:CDS
TTCGGGTCATTTGATTCTCT+CGG 0.463515 tig0016063:-96632 Msa1357430:CDS
GTTTGTGGTTACGCATACCT+TGG 0.469238 tig0016063:+97243 None:intergenic
TAGCGACGTGTGGCTGGGAC+GGG 0.469608 tig0016063:-95832 Msa1357430:CDS
GAGGAGCACGCCAAGAAGAA+AGG 0.472310 tig0016063:-96871 Msa1357430:CDS
CTAGTGATGACAAGTCCCTC+AGG 0.475381 tig0016063:-96222 Msa1357430:CDS
TCAACACTGGTAAATGTATG+AGG 0.476160 tig0016063:-96573 Msa1357430:CDS
GCCCATAGTTGGTCATAGGT+AGG 0.476846 tig0016063:+97311 None:intergenic
ACTTGGAGCGGACATACAAA+AGG 0.478707 tig0016063:-96682 Msa1357430:CDS
CTTCGACGAAACCAAGTTTG+TGG 0.490052 tig0016063:+97228 None:intergenic
CTCGGCTGGTATGGATACTA+AGG 0.491505 tig0016063:-96614 Msa1357430:CDS
TTTGATTCTCTCGGCTGGTA+TGG 0.492749 tig0016063:-96623 Msa1357430:CDS
GGTCATTTGATTCTCTCGGC+TGG 0.501830 tig0016063:-96628 Msa1357430:CDS
TTTGTGGTTACGCATACCTT+GGG 0.502829 tig0016063:+97244 None:intergenic
TGTTGCTGGATATGCTTGTC+AGG 0.503005 tig0016063:-96011 Msa1357430:CDS
GCTAAACCGTCTTTAGCGTA+AGG 0.515618 tig0016063:+97266 None:intergenic
CAAAGTAGCGACGTGTGGCT+GGG 0.520964 tig0016063:-95837 Msa1357430:CDS
CATTCTGTTTATCCTCATCC+GGG 0.523411 tig0016063:+96364 None:intergenic
GTAGCGACGTGTGGCTGGGA+CGG 0.525013 tig0016063:-95833 Msa1357430:CDS
CCCATAGTTGGTCATAGGTA+GGG 0.525817 tig0016063:+97312 None:intergenic
CGCGCCTCCGAAAGATGCTA+AGG 0.529557 tig0016063:-96746 Msa1357430:CDS
CTAATATACTTTATAACCAC+GGG 0.530865 tig0016063:+96162 None:intergenic
CTTGGAGCGGACATACAAAA+GGG 0.531466 tig0016063:-96681 Msa1357430:CDS
TGTCATGTCGGGAGATGGTG+AGG 0.538558 tig0016063:-95963 Msa1357430:CDS
TGATAAGAAGATTGTTCAGT+GGG 0.538924 tig0016063:-96341 Msa1357430:CDS
ATAAGAAGAGTCCTTGGGCT+GGG 0.539663 tig0016063:-96945 Msa1357430:CDS
GATTGAGAATCCAGCTTCTG+AGG 0.541239 tig0016063:-96983 Msa1357430:CDS
TTATGTTGTGAAGCTTAACC+CGG 0.541534 tig0016063:-96401 Msa1357430:CDS
CCAAAGGAGTAGCAACATAG+TGG 0.541915 tig0016063:-92031 Msa1357430:three_prime_UTR
GGTATGCGTAACCACAAACT+TGG 0.542950 tig0016063:-97258 Msa1357430:exon
GAAGAATAAGAAGAGTCCTT+GGG 0.545960 tig0016063:-96950 Msa1357430:CDS
GTTGTTATCAACAAAAGTAA+TGG 0.548421 tig0016063:+96242 None:intergenic
CTTTAGCGTAAGGGTGAGAC+GGG 0.549707 tig0016063:+97276 None:intergenic
TGACAAGTCCCTCAGGGTAT+GGG 0.550285 tig0016063:-96215 Msa1357430:CDS
TTATATCGACGTTCTCCACT+GGG 0.551618 tig0016063:-96432 Msa1357430:CDS
CCTTCCTTCTTCCCAGCCCA+AGG 0.553576 tig0016063:+96915 None:intergenic
CACACCGCGAACAGAAGAAG+AGG 0.557884 tig0016063:-97080 Msa1357430:CDS
TGCTGTTCATCAAAGAGGAA+AGG 0.560443 tig0016063:+97191 None:intergenic
GGGACGGGTTGATAAAGTAC+TGG 0.561357 tig0016063:-95817 Msa1357430:CDS
GGTTAAGCTTCACAACATAA+GGG 0.563836 tig0016063:+96385 None:intergenic
CCTTGGGCTGGGAAGAAGGA+AGG 0.564772 tig0016063:-96934 Msa1357430:CDS
CGGCGAGCCAATTCGCGTTG+GGG 0.566063 tig0016063:+96100 None:intergenic
CCCTACCTATGACCAACTAT+GGG 0.566642 tig0016063:-97331 None:intergenic
GGGAAGAAGGAAGGTTTACA+AGG 0.566983 tig0016063:-96925 Msa1357430:CDS
AATAAGAAGAGTCCTTGGGC+TGG 0.567302 tig0016063:-96946 Msa1357430:CDS
GACATGACAAAACGTCCATC+CGG 0.567963 tig0016063:+95958 None:intergenic
AAAGAGGAAAGGGATTATCA+AGG 0.572402 tig0016063:-96781 Msa1357430:CDS
TTGGGATACCGAAACAGGGC+AGG 0.573233 tig0016063:-96455 Msa1357430:CDS
AGATTCTTATTTATAGCACA+AGG 0.575025 tig0016063:-96078 Msa1357430:CDS
GAAGGCATAGAGTGCATATG+TGG 0.575203 tig0016063:+96135 None:intergenic
CCGATGTAATTTAACGCAGA+AGG 0.577079 tig0016063:+97134 None:intergenic
AAGAGTATGATCAGCATTTG+GGG 0.578509 tig0016063:-96294 Msa1357430:CDS
TGTGAAGCTTAACCCGGATG+AGG 0.580826 tig0016063:-96395 Msa1357430:CDS
TGTCACGAAGGCGTTACCAT+CGG 0.581186 tig0016063:-95887 Msa1357430:CDS
TAAATGTATGAGGACTTACA+TGG 0.581377 tig0016063:-96563 Msa1357430:CDS
AGCAGCGTTATTCTTCTGCA+AGG 0.583382 tig0016063:+97100 None:intergenic
AGAATCCAGCTTCTGAGGCG+TGG 0.583927 tig0016063:-96978 Msa1357430:CDS
AAGAAAATCTCGTTGAGCCA+AGG 0.584209 tig0016063:+91986 None:intergenic
ACTAATATACTTTATAACCA+CGG 0.592566 tig0016063:+96161 None:intergenic
GCTAAAGACGGTTTAGCCCA+AGG 0.595353 tig0016063:-97279 Msa1357430:five_prime_UTR
CTCGCCTTAGCATCTTTCGG+AGG 0.597269 tig0016063:+96723 None:intergenic
GCTACTTTGCTCTGTTCCAG+AGG 0.598337 tig0016063:+95832 None:intergenic
GACGAAAATAACGACGAAGA+GGG 0.600243 tig0016063:-97012 Msa1357430:CDS
TGTTATGCTGTTCATCAAAG+AGG 0.601244 tig0016063:+97186 None:intergenic
CTGGAACTAAGTAGCAGAAG+CGG 0.602263 tig0016063:-92077 Msa1357430:three_prime_UTR
TCTGTTCCAGAGGATGCCAC+TGG 0.603366 tig0016063:+95842 None:intergenic
TGGAACTAAGTAGCAGAAGC+GGG 0.606107 tig0016063:-92076 Msa1357430:three_prime_UTR
AGGAAAGGGATTATCAAGGT+AGG 0.608842 tig0016063:-96777 Msa1357430:CDS
CTAAACCGTCTTTAGCGTAA+GGG 0.612580 tig0016063:+97267 None:intergenic
TTGGGGTGAAGCGAAATGGA+AGG 0.612660 tig0016063:+96117 None:intergenic
CCTTCTGCGTTAAATTACAT+CGG 0.614925 tig0016063:-97153 Msa1357430:CDS
TCTTTAGCGTAAGGGTGAGA+CGG 0.615894 tig0016063:+97275 None:intergenic
GTCATGTCGGGAGATGGTGA+GGG 0.616926 tig0016063:-95962 Msa1357430:CDS
TTCAGTGGGATATGAATACA+GGG 0.624256 tig0016063:-96327 Msa1357430:CDS
CGGGTAGACAGAACACCACA+TGG 0.627746 tig0016063:-92057 Msa1357430:three_prime_UTR
GAACACCACATGGCGACCAA+AGG 0.627815 tig0016063:-92047 Msa1357430:three_prime_UTR
ACCATACTCCCATACCCTGA+GGG 0.627909 tig0016063:+96188 None:intergenic
TAGTGATGACAAGTCCCTCA+GGG 0.628378 tig0016063:-96221 Msa1357430:CDS
CTACTCCTTTGGTCGCCATG+TGG 0.638075 tig0016063:+92042 None:intergenic
AGGATGCCACTGGCAACCGA+TGG 0.645652 tig0016063:+95852 None:intergenic
TCTCACCCTTACGCTAAAGA+CGG 0.646041 tig0016063:-97291 Msa1357430:five_prime_UTR
AGATTGGTGCATACTTGGAG+CGG 0.649087 tig0016063:-96694 Msa1357430:CDS
GCGTTACCATCGGTTGCCAG+TGG 0.652062 tig0016063:-95877 Msa1357430:CDS
GATTCTTATTTATAGCACAA+GGG 0.653583 tig0016063:-96077 Msa1357430:CDS
GAGATGGTGAGGGTAAGTGT+TGG 0.656084 tig0016063:-95952 Msa1357430:CDS
CAGAGCAAAGTAGCGACGTG+TGG 0.656241 tig0016063:-95842 Msa1357430:CDS
CGACGAAAATAACGACGAAG+AGG 0.657011 tig0016063:-97013 Msa1357430:CDS
GTGATAAGAAGATTGTTCAG+TGG 0.659340 tig0016063:-96342 Msa1357430:CDS
AAATGTATGAGGACTTACAT+GGG 0.686630 tig0016063:-96562 Msa1357430:CDS
ATGGGAGTATGGTATTCCCG+TGG 0.688322 tig0016063:-96197 Msa1357430:CDS
TTGGAGCGGACATACAAAAG+GGG 0.692861 tig0016063:-96680 Msa1357430:CDS
AGAACTCTCAAGTGTCACGA+AGG 0.693137 tig0016063:-95899 Msa1357430:CDS
AGTATTGGGATACCGAAACA+GGG 0.695845 tig0016063:-96459 Msa1357430:CDS
TACCATACTCCCATACCCTG+AGG 0.704189 tig0016063:+96187 None:intergenic
AGAGTATGATCAGCATTTGG+GGG 0.704600 tig0016063:-96293 Msa1357430:CDS
AACATAAGGGATCTTCCCAG+TGG 0.720474 tig0016063:+96398 None:intergenic
AGATCAGAAGAAATACGCTG+AGG 0.728271 tig0016063:-96890 Msa1357430:CDS
CTGGTTATCCAAGCTCTGCG+CGG 0.754282 tig0016063:+96080 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTATGTAAAATTTTATT+TGG - tig0016063:93803-93822 Msa1357430:intron 10.0%
!! TGAATATAATTTAATACTAT+GGG + tig0016063:96479-96498 None:intergenic 10.0%
!! ATGATAAGAATATTAAGTAT+TGG - tig0016063:92829-92848 Msa1357430:intron 15.0%
!! TGATAAGAATATTAAGTATT+GGG - tig0016063:92830-92849 Msa1357430:intron 15.0%
!!! TCTTTTTCTTTGTAAAATTA+TGG + tig0016063:94575-94594 None:intergenic 15.0%
!!! ATAATTTTACAAAGAAAAAG+AGG - tig0016063:94574-94593 Msa1357430:intron 15.0%
!!! ATCATTTCTTTTTTTTAAGT+TGG - tig0016063:94700-94719 Msa1357430:intron 15.0%
!!! ATACTTGATAACTATAATTA+GGG + tig0016063:95235-95254 None:intergenic 15.0%
!!! ATACTTGATAACTATAATTA+GGG + tig0016063:95235-95254 None:intergenic 15.0%
!!! TTTTTGCATTTCTTTAATAT+AGG - tig0016063:95659-95678 Msa1357430:intron 15.0%
!!! TTTTGCATTTCTTTAATATA+GGG - tig0016063:95660-95679 Msa1357430:intron 15.0%
!! CTGAATATAATTTAATACTA+TGG + tig0016063:96480-96499 None:intergenic 15.0%
!! TTAAATTATATTCAGAAATC+AGG - tig0016063:96485-96504 Msa1357430:CDS 15.0%
!!! GACAATTTTTTTTTTTTTGA+AGG - tig0016063:96586-96605 Msa1357430:CDS 15.0%
!! TGTATTAACAACTTAAAATA+CGG + tig0016063:96657-96676 None:intergenic 15.0%
!!! CATAACACCTTTTTAAAATT+CGG - tig0016063:92114-92133 Msa1357430:intron 20.0%
!!! GATATTTGTTTTACTAATGA+TGG - tig0016063:92783-92802 Msa1357430:intron 20.0%
!! ACTAATATACTTTATAACCA+CGG + tig0016063:93126-93145 None:intergenic 20.0%
!! TAAGACTCTGTAATTATATA+TGG + tig0016063:93533-93552 None:intergenic 20.0%
!! TACACAAAATTCTATCAAAA+TGG + tig0016063:93623-93642 None:intergenic 20.0%
!!! TTTTGATAGAATTTTGTGTA+TGG - tig0016063:93623-93642 Msa1357430:intron 20.0%
!! TATTCAATTCAAGCTAATAT+AGG - tig0016063:93647-93666 Msa1357430:intron 20.0%
!! TTTAGATTGCATCAAATTAT+AGG - tig0016063:93709-93728 Msa1357430:intron 20.0%
!! TTAGATTGCATCAAATTATA+GGG - tig0016063:93710-93729 Msa1357430:intron 20.0%
!! ACAAAGCAGTTTAAAAATAT+GGG + tig0016063:94465-94484 None:intergenic 20.0%
!! AACAAAGCAGTTTAAAAATA+TGG + tig0016063:94466-94485 None:intergenic 20.0%
!!! AAACTGCTTTGTTTAATTTT+AGG - tig0016063:94473-94492 Msa1357430:intron 20.0%
!!! AACTGCTTTGTTTAATTTTA+GGG - tig0016063:94474-94493 Msa1357430:intron 20.0%
!! AATGACCAAAGTTAATTATA+AGG - tig0016063:95030-95049 Msa1357430:intron 20.0%
!! ATGACCAAAGTTAATTATAA+GGG - tig0016063:95031-95050 Msa1357430:intron 20.0%
!! ATTTCCCTTATAATTAACTT+TGG + tig0016063:95038-95057 None:intergenic 20.0%
!!! CATACTTGATAACTATAATT+AGG + tig0016063:95236-95255 None:intergenic 20.0%
!!! CATACTTGATAACTATAATT+AGG + tig0016063:95236-95255 None:intergenic 20.0%
!! TGACATTTGGATAATATTAT+TGG - tig0016063:95757-95776 Msa1357430:intron 20.0%
!! TGGATAATATTATTGGAATT+AGG - tig0016063:95764-95783 Msa1357430:intron 20.0%
!! CTGATAAATTAAACTAAGAT+GGG + tig0016063:96266-96285 None:intergenic 20.0%
!! ACTGATAAATTAAACTAAGA+TGG + tig0016063:96267-96286 None:intergenic 20.0%
!!! GTTTTAAAACTTAGCTATTT+TGG - tig0016063:96417-96436 Msa1357430:CDS 20.0%
!! AGTACAATTATTGATATTTG+CGG + tig0016063:97031-97050 None:intergenic 20.0%
! ATTCTCTTCTTTCTTCTTAA+GGG + tig0016063:92259-92278 None:intergenic 25.0%
!!! TTGTTTTATACCAAAGAGAT+TGG - tig0016063:92593-92612 Msa1357430:intron 25.0%
! GTTGTTATCAACAAAAGTAA+TGG + tig0016063:93045-93064 None:intergenic 25.0%
!!! TTACTTTTGTTGATAACAAC+AGG - tig0016063:93045-93064 Msa1357430:intron 25.0%
! CTAATATACTTTATAACCAC+GGG + tig0016063:93125-93144 None:intergenic 25.0%
! TTGTGCTATAAATAAGAATC+TGG + tig0016063:93226-93245 None:intergenic 25.0%
!! AGATTCTTATTTATAGCACA+AGG - tig0016063:93225-93244 Msa1357430:intron 25.0%
!! GATTCTTATTTATAGCACAA+GGG - tig0016063:93226-93245 Msa1357430:intron 25.0%
! TTCAACTTAACAAAAAGAAG+AGG - tig0016063:93255-93274 Msa1357430:intron 25.0%
!! GATAGTCATCATTAGTTTAT+TGG - tig0016063:93737-93756 Msa1357430:intron 25.0%
!! ATTGTTTTCCTAAAAGCTAA+AGG + tig0016063:93869-93888 None:intergenic 25.0%
! AAAAAGAGTTGTAGATAACA+GGG + tig0016063:93892-93911 None:intergenic 25.0%
! AAAAAAGAGTTGTAGATAAC+AGG + tig0016063:93893-93912 None:intergenic 25.0%
! TATTGACAATGGAGAATAAA+GGG + tig0016063:93950-93969 None:intergenic 25.0%
! ATATTGACAATGGAGAATAA+AGG + tig0016063:93951-93970 None:intergenic 25.0%
! CTCCTATCATGTATATATTA+AGG - tig0016063:94092-94111 Msa1357430:intron 25.0%
!! TTACAAAGAAAAAGAGGTAT+TGG - tig0016063:94580-94599 Msa1357430:intron 25.0%
!! AGTTAGTAGTTAAGGTATTA+GGG - tig0016063:94983-95002 Msa1357430:intron 25.0%
!!! AACGATAAATTTTAGCATAG+CGG + tig0016063:95290-95309 None:intergenic 25.0%
! TAATATAGGGACTACTATAA+AGG - tig0016063:95673-95692 Msa1357430:intron 25.0%
! CTAATGATACATTTGACATT+TGG - tig0016063:95744-95763 Msa1357430:intron 25.0%
!! GTGAATAATACATTTGCTTT+TGG - tig0016063:95789-95808 Msa1357430:intron 25.0%
! CTATCATGATTTAGAAAAAG+GGG + tig0016063:95826-95845 None:intergenic 25.0%
! GCTATCATGATTTAGAAAAA+GGG + tig0016063:95827-95846 None:intergenic 25.0%
!!! TCCTTCAAGTTTATGATTTT+AGG - tig0016063:95880-95899 Msa1357430:CDS 25.0%
! ACCTAAAATCATAAACTTGA+AGG + tig0016063:95884-95903 None:intergenic 25.0%
! TGAAAATGAACAAATCCATT+GGG + tig0016063:96183-96202 None:intergenic 25.0%
! ATGAAAATGAACAAATCCAT+TGG + tig0016063:96184-96203 None:intergenic 25.0%
! GAATAGCGAAATATATCATA+TGG + tig0016063:96680-96699 None:intergenic 25.0%
! TATAAAGAATGAGAGCAAAA+GGG + tig0016063:96974-96993 None:intergenic 25.0%
! TTATAAAGAATGAGAGCAAA+AGG + tig0016063:96975-96994 None:intergenic 25.0%
! ATTTGGACCAAATATATGTA+TGG - tig0016063:97064-97083 Msa1357430:CDS 25.0%
! TTTGGACCAAATATATGTAT+GGG - tig0016063:97065-97084 Msa1357430:CDS 25.0%
!! AGCGTAACCGAATTTTAAAA+AGG + tig0016063:92124-92143 None:intergenic 30.0%
CATTCTCTTCTTTCTTCTTA+AGG + tig0016063:92260-92279 None:intergenic 30.0%
!!! AAGGATAAGAGTACTTTTCA+TGG - tig0016063:92498-92517 Msa1357430:intron 30.0%
!!! AGGATAAGAGTACTTTTCAT+GGG - tig0016063:92499-92518 Msa1357430:intron 30.0%
!!! GATTAGGTTTTTTCCGAATT+CGG - tig0016063:92653-92672 Msa1357430:intron 30.0%
!!! ATTAGGTTTTTTCCGAATTC+GGG - tig0016063:92654-92673 Msa1357430:intron 30.0%
TGGATACTAAGGTTAAGATT+TGG - tig0016063:92700-92719 Msa1357430:intron 30.0%
GGATACTAAGGTTAAGATTT+GGG - tig0016063:92701-92720 Msa1357430:intron 30.0%
TAAATGTATGAGGACTTACA+TGG - tig0016063:92740-92759 Msa1357430:intron 30.0%
AAATGTATGAGGACTTACAT+GGG - tig0016063:92741-92760 Msa1357430:intron 30.0%
! GGATAAACAGAATGTTTTGT+TGG - tig0016063:92929-92948 Msa1357430:intron 30.0%
TGATAAGAAGATTGTTCAGT+GGG - tig0016063:92962-92981 Msa1357430:intron 30.0%
!!! ACTCTTTTTTACACTTGTGT+AGG - tig0016063:93903-93922 Msa1357430:intron 30.0%
CTTTCACATCATATTGACAA+TGG + tig0016063:93961-93980 None:intergenic 30.0%
!!! TTCTGCTGAATATTTTGACT+TGG - tig0016063:94040-94059 Msa1357430:intron 30.0%
CGCCTTAATATATACATGAT+AGG + tig0016063:94097-94116 None:intergenic 30.0%
TCACATTAATCTCTACATCA+AGG - tig0016063:94167-94186 Msa1357430:intron 30.0%
!!! AGTCAATGCGTGTTTTTTTA+AGG - tig0016063:94503-94522 Msa1357430:intron 30.0%
! ACCATTTGATTGACAACTTT+TGG - tig0016063:94544-94563 Msa1357430:intron 30.0%
! CCATTTGATTGACAACTTTT+GGG - tig0016063:94545-94564 Msa1357430:intron 30.0%
ATTCGAGAACATATTTCTTC+TGG - tig0016063:94739-94758 Msa1357430:intron 30.0%
AGAAAAGCAAAGAAAACCAA+CGG + tig0016063:94957-94976 None:intergenic 30.0%
! CAGTTAGTAGTTAAGGTATT+AGG - tig0016063:94982-95001 Msa1357430:intron 30.0%
TCTTGTTAATCTTAGCATAG+CGG + tig0016063:95421-95440 None:intergenic 30.0%
!!! TGTATTTTTTAGATGCCAAC+TGG - tig0016063:95538-95557 Msa1357430:intron 30.0%
!! TCTTTAGTCCCTTTTGTTTA+TGG + tig0016063:95609-95628 None:intergenic 30.0%
GGCTATCATGATTTAGAAAA+AGG + tig0016063:95828-95847 None:intergenic 30.0%
TTTCTAAATCATGATAGCCA+TGG - tig0016063:95829-95848 Msa1357430:CDS 30.0%
AACTCAATAATTTGACACCA+TGG + tig0016063:95849-95868 None:intergenic 30.0%
TTGACTTAATTCACCTACAA+TGG - tig0016063:95911-95930 Msa1357430:CDS 30.0%
GTATACATAAAAGCCATTGT+AGG + tig0016063:95927-95946 None:intergenic 30.0%
! AATGGCTTTTATGTATACTC+AGG - tig0016063:95929-95948 Msa1357430:CDS 30.0%
CCAGAAAACATAAAAGCAAT+TGG + tig0016063:96040-96059 None:intergenic 30.0%
!! CCAATTGCTTTTATGTTTTC+TGG - tig0016063:96037-96056 Msa1357430:CDS 30.0%
TGATTACATAAGCAAACCTA+TGG - tig0016063:96064-96083 Msa1357430:CDS 30.0%
GAAAATGAACAAATCCATTG+GGG + tig0016063:96182-96201 None:intergenic 30.0%
! CATTTTCATCCTTTTGAATG+TGG - tig0016063:96195-96214 Msa1357430:CDS 30.0%
TATTTCGCTATTCCATAAGA+TGG - tig0016063:96687-96706 Msa1357430:CDS 30.0%
ATTTCGCTATTCCATAAGAT+GGG - tig0016063:96688-96707 Msa1357430:CDS 30.0%
!! ATTCTATTGATTCCAGTGAA+AGG + tig0016063:96740-96759 None:intergenic 30.0%
AATCTTATCAGGATTAGGAA+AGG + tig0016063:96775-96794 None:intergenic 30.0%
TTGCTAATCTTATCAGGATT+AGG + tig0016063:96780-96799 None:intergenic 30.0%
TAATCCTGATAAGATTAGCA+AGG - tig0016063:96779-96798 Msa1357430:CDS 30.0%
AGAATATCATCTTGAAACTC+AGG + tig0016063:96835-96854 None:intergenic 30.0%
! GTTTATTGTGTATACCGTTT+TGG - tig0016063:96859-96878 Msa1357430:CDS 30.0%
AGTTAAAAGTCAAATGGTGT+TGG + tig0016063:97007-97026 None:intergenic 30.0%
TTGGACCAAATATATGTATG+GGG - tig0016063:97066-97085 Msa1357430:CDS 30.0%
AATGTCCCCATACATATATT+TGG + tig0016063:97074-97093 None:intergenic 30.0%
TGACATCAATGTCTATATGT+TGG - tig0016063:97148-97167 Msa1357430:CDS 30.0%
TGTTATGCTGTTCATCAAAG+AGG + tig0016063:92101-92120 None:intergenic 35.0%
CCTTCTGCGTTAAATTACAT+CGG - tig0016063:92150-92169 Msa1357430:intron 35.0%
TGAAGAATAAGAAGAGTCCT+TGG - tig0016063:92352-92371 Msa1357430:intron 35.0%
GAAGAATAAGAAGAGTCCTT+GGG - tig0016063:92353-92372 Msa1357430:intron 35.0%
AGGTTTACAAGGAGAGTTAA+CGG - tig0016063:92389-92408 Msa1357430:intron 35.0%
! TTTTTCTTCGCCTTTCTTCT+TGG + tig0016063:92445-92464 None:intergenic 35.0%
AAGAAAGGCGAAGAAAAAAG+TGG - tig0016063:92447-92466 Msa1357430:intron 35.0%
!!! GAAGAAAAAAGTGGTTTTGG+TGG - tig0016063:92456-92475 Msa1357430:intron 35.0%
!!! TTTTGGTGGTGAAAAAGTTG+AGG - tig0016063:92470-92489 Msa1357430:intron 35.0%
TGAAAAAGTTGAGGCTGTTA+AGG - tig0016063:92479-92498 Msa1357430:intron 35.0%
! TTTTCATGGGAAAGAGGAAA+GGG - tig0016063:92512-92531 Msa1357430:intron 35.0%
AAAGAGGAAAGGGATTATCA+AGG - tig0016063:92522-92541 Msa1357430:intron 35.0%
AGAATCAAATGACCCGAATT+CGG + tig0016063:92669-92688 None:intergenic 35.0%
!! ATTTGGGATGTTTTCAACAC+TGG - tig0016063:92717-92736 Msa1357430:intron 35.0%
TCAACACTGGTAAATGTATG+AGG - tig0016063:92730-92749 Msa1357430:intron 35.0%
ACAAATATCCCTAACAGCTT+TGG + tig0016063:92772-92791 None:intergenic 35.0%
GGTTAAGCTTCACAACATAA+GGG + tig0016063:92902-92921 None:intergenic 35.0%
TTATGTTGTGAAGCTTAACC+CGG - tig0016063:92902-92921 Msa1357430:intron 35.0%
ACATTCTGTTTATCCTCATC+CGG + tig0016063:92924-92943 None:intergenic 35.0%
!! AAACAGAATGTTTTGTTGGC+TGG - tig0016063:92933-92952 Msa1357430:intron 35.0%
GTGATAAGAAGATTGTTCAG+TGG - tig0016063:92961-92980 Msa1357430:intron 35.0%
TTCAGTGGGATATGAATACA+GGG - tig0016063:92976-92995 Msa1357430:intron 35.0%
! TCAAGAGTATGATCAGCATT+TGG - tig0016063:93007-93026 Msa1357430:intron 35.0%
! CAAGAGTATGATCAGCATTT+GGG - tig0016063:93008-93027 Msa1357430:intron 35.0%
! AAGAGTATGATCAGCATTTG+GGG - tig0016063:93009-93028 Msa1357430:intron 35.0%
AACAAAAAGAAGAGGTTTGC+TGG - tig0016063:93263-93282 Msa1357430:intron 35.0%
TCCTTAGACGATCTTCATAT+TGG - tig0016063:93840-93859 Msa1357430:intron 35.0%
ACAATGGAGAATAAAGGGTT+AGG + tig0016063:93945-93964 None:intergenic 35.0%
AACAAGTTATCCATGTACAG+TGG + tig0016063:93984-94003 None:intergenic 35.0%
AGTGCGACAAATAAATTCAC+AGG + tig0016063:94213-94232 None:intergenic 35.0%
TACTAACAAAGACCCCTAAA+TGG + tig0016063:94243-94262 None:intergenic 35.0%
GGTCTTTGTTAGTAGTAAGT+TGG - tig0016063:94249-94268 Msa1357430:intron 35.0%
CCCAAAAGTTGTCAATCAAA+TGG + tig0016063:94548-94567 None:intergenic 35.0%
! TTACCTTTTTCTGCATGTGA+AGG - tig0016063:94908-94927 Msa1357430:intron 35.0%
CTCTGTTCAGTTAGTAGTTA+AGG - tig0016063:94975-94994 Msa1357430:intron 35.0%
!! CTTCTTAACTTGTGCCTTAA+GGG + tig0016063:95072-95091 None:intergenic 35.0%
CCACTATTGTGAAGACTAAA+GGG + tig0016063:95263-95282 None:intergenic 35.0%
CCACTATTGTGAAGACTAAA+GGG + tig0016063:95263-95282 None:intergenic 35.0%
TAGTAAGACACATGCTTGTT+TGG - tig0016063:95449-95468 Msa1357430:intron 35.0%
TTGGCACATTTAATGCCATA+TGG - tig0016063:95468-95487 Msa1357430:intron 35.0%
GTAATGAATGTCAGTCCATA+TGG + tig0016063:95486-95505 None:intergenic 35.0%
TACTGATCAAGTCTTCAGAA+AGG - tig0016063:95506-95525 Msa1357430:intron 35.0%
TAATGGGGACCATAAACAAA+AGG - tig0016063:95597-95616 Msa1357430:intron 35.0%
AATGGGGACCATAAACAAAA+GGG - tig0016063:95598-95617 Msa1357430:intron 35.0%
AGGTTAATGTCTGTGCATTA+TGG + tig0016063:95997-96016 None:intergenic 35.0%
!! TGTTTCAAACTTGCTACCAT+AGG + tig0016063:96083-96102 None:intergenic 35.0%
! AAGTTTGAAACATACCCAAG+AGG - tig0016063:96091-96110 Msa1357430:CDS 35.0%
GTTGAATTCAATCATCTCGT+TGG + tig0016063:96117-96136 None:intergenic 35.0%
ACAGAGTTTAATTGACACCA+TGG - tig0016063:96292-96311 Msa1357430:CDS 35.0%
TTTAATTGACACCATGGCTA+TGG - tig0016063:96298-96317 Msa1357430:CDS 35.0%
! TGGTTTGTGATAGAACAGTA+TGG - tig0016063:96318-96337 Msa1357430:CDS 35.0%
!! TGTCACTTTATGAGTTGAGT+CGG - tig0016063:96547-96566 Msa1357430:CDS 35.0%
AATATGTCGATCCCATCTTA+TGG + tig0016063:96702-96721 None:intergenic 35.0%
ATCTTGAAACTCAGGATGAA+TGG + tig0016063:96827-96846 None:intergenic 35.0%
AAATGCAACAACTGCCAAAA+CGG + tig0016063:96876-96895 None:intergenic 35.0%
TGCGGTAGTTAAAAGTCAAA+TGG + tig0016063:97013-97032 None:intergenic 35.0%
TACTCAGACGAAATGTGATT+TGG - tig0016063:97047-97066 Msa1357430:CDS 35.0%
! ACACTCTTAGTTCAAGTTTC+TGG - tig0016063:97111-97130 Msa1357430:CDS 35.0%
! CTTGTTGATTATGTCTTCCT+TGG - tig0016063:97281-97300 Msa1357430:five_prime_UTR 35.0%
CTAAACCGTCTTTAGCGTAA+GGG + tig0016063:92020-92039 None:intergenic 40.0%
TTTGTGGTTACGCATACCTT+GGG + tig0016063:92043-92062 None:intergenic 40.0%
TGCTGTTCATCAAAGAGGAA+AGG + tig0016063:92096-92115 None:intergenic 40.0%
CCGATGTAATTTAACGCAGA+AGG + tig0016063:92153-92172 None:intergenic 40.0%
! TTTTCCTCTTCTTCTGTTCG+CGG + tig0016063:92230-92249 None:intergenic 40.0%
GACGAAAATAACGACGAAGA+GGG - tig0016063:92291-92310 Msa1357430:intron 40.0%
AGATCAGAAGAAATACGCTG+AGG - tig0016063:92413-92432 Msa1357430:intron 40.0%
! GGCGAAGAAAAAAGTGGTTT+TGG - tig0016063:92453-92472 Msa1357430:intron 40.0%
! GAGTACTTTTCATGGGAAAG+AGG - tig0016063:92506-92525 Msa1357430:intron 40.0%
! CTTTTCATGGGAAAGAGGAA+AGG - tig0016063:92511-92530 Msa1357430:intron 40.0%
AGGAAAGGGATTATCAAGGT+AGG - tig0016063:92526-92545 Msa1357430:intron 40.0%
TTACTCGCCTTAGCATCTTT+CGG + tig0016063:92567-92586 None:intergenic 40.0%
CAAGTATGCACCAATCTCTT+TGG + tig0016063:92606-92625 None:intergenic 40.0%
CAAAGAGATTGGTGCATACT+TGG - tig0016063:92604-92623 Msa1357430:intron 40.0%
TTCGGGTCATTTGATTCTCT+CGG - tig0016063:92671-92690 Msa1357430:intron 40.0%
!!! GGAACAAAGTTTTTGAGTGC+TGG - tig0016063:92804-92823 Msa1357430:intron 40.0%
!! AAGTATTGGGATACCGAAAC+AGG - tig0016063:92843-92862 Msa1357430:intron 40.0%
! AGTATTGGGATACCGAAACA+GGG - tig0016063:92844-92863 Msa1357430:intron 40.0%
TTATATCGACGTTCTCCACT+GGG - tig0016063:92871-92890 Msa1357430:intron 40.0%
GGGTTAAGCTTCACAACATA+AGG + tig0016063:92903-92922 None:intergenic 40.0%
CATTCTGTTTATCCTCATCC+GGG + tig0016063:92923-92942 None:intergenic 40.0%
GTTCAGTGGGATATGAATAC+AGG - tig0016063:92975-92994 Msa1357430:intron 40.0%
AGAGTATGATCAGCATTTGG+GGG - tig0016063:93010-93029 Msa1357430:intron 40.0%
! TTGTCAGGTCAATTTTTCGC+CGG - tig0016063:93307-93326 Msa1357430:intron 40.0%
TGAAGATCGTCTAAGGACTT+AGG + tig0016063:93837-93856 None:intergenic 40.0%
GCCAATATGAAGATCGTCTA+AGG + tig0016063:93844-93863 None:intergenic 40.0%
!!! ATTGGCAGCCTTTAGCTTTT+AGG - tig0016063:93858-93877 Msa1357430:intron 40.0%
TTGGAATGAGAAGAGTTGCA+TGG - tig0016063:94059-94078 Msa1357430:intron 40.0%
! TCCATTTTCATCCACAACCT+TGG - tig0016063:94135-94154 Msa1357430:intron 40.0%
! TAATGTGAAAGTGTGTGCCA+AGG + tig0016063:94155-94174 None:intergenic 40.0%
! CACAGGTGGACATATTTTTC+AGG + tig0016063:94196-94215 None:intergenic 40.0%
GCGACAAATAAATTCACAGG+TGG + tig0016063:94210-94229 None:intergenic 40.0%
AACATAGGTTGCAGGAACAA+GGG + tig0016063:94341-94360 None:intergenic 40.0%
ACTTTCTCTCTCTACTGCTT+TGG + tig0016063:94614-94633 None:intergenic 40.0%
AGTCTCACAAGTCACAACTA+AGG + tig0016063:94782-94801 None:intergenic 40.0%
GGGAAACAAAGCTTAGTACA+GGG + tig0016063:94812-94831 None:intergenic 40.0%
AGGGAAACAAAGCTTAGTAC+AGG + tig0016063:94813-94832 None:intergenic 40.0%
! GTTCTTCTCTGTGTTGTTGT+TGG - tig0016063:94880-94899 Msa1357430:intron 40.0%
TCTCCTTCACATGCAGAAAA+AGG + tig0016063:94914-94933 None:intergenic 40.0%
TATGTTCTACTCTGTTCCGT+TGG - tig0016063:94938-94957 Msa1357430:intron 40.0%
! AATGCTAACTTGTGCCCTTA+AGG - tig0016063:95055-95074 Msa1357430:intron 40.0%
!! GCTTCTTAACTTGTGCCTTA+AGG + tig0016063:95073-95092 None:intergenic 40.0%
!! CTCATTAACTTGTGCCCTAA+GGG - tig0016063:95194-95213 Msa1357430:intron 40.0%
! CCCTTTAGTCTTCACAATAG+TGG - tig0016063:95260-95279 Msa1357430:intron 40.0%
GCCACTATTGTGAAGACTAA+AGG + tig0016063:95264-95283 None:intergenic 40.0%
!! CTCATTAACTTGTGCCCTAA+GGG - tig0016063:95194-95213 Msa1357430:intron 40.0%
! CCCTTTAGTCTTCACAATAG+TGG - tig0016063:95260-95279 Msa1357430:intron 40.0%
GCCACTATTGTGAAGACTAA+AGG + tig0016063:95264-95283 None:intergenic 40.0%
CAAGTCTTCAGAAAGGAACT+TGG - tig0016063:95513-95532 Msa1357430:intron 40.0%
GGCATTTACCATGGCATATT+AGG - tig0016063:95559-95578 Msa1357430:intron 40.0%
TTGTTTATGGTCCCCATTAG+TGG + tig0016063:95596-95615 None:intergenic 40.0%
AAAGAGACCCATAGAATCAC+AGG - tig0016063:95624-95643 Msa1357430:intron 40.0%
TACTATAAAGGTCACTGCCA+AGG - tig0016063:95685-95704 Msa1357430:intron 40.0%
! ACCACTTTCATCTGAAACCT+TGG + tig0016063:95705-95724 None:intergenic 40.0%
AGTTGAGTGCTACAACTAAG+AGG + tig0016063:96017-96036 None:intergenic 40.0%
ATTAGACCAGGCTAAACATG+AGG + tig0016063:96230-96249 None:intergenic 40.0%
ATGTTTAGCCTGGTCTAATC+TGG - tig0016063:96231-96250 Msa1357430:CDS 40.0%
TCTATCACAAACCATAGCCA+TGG + tig0016063:96312-96331 None:intergenic 40.0%
CCAGTGAAAGGAATCATATC+AGG + tig0016063:96728-96747 None:intergenic 40.0%
CCTGATATGATTCCTTTCAC+TGG - tig0016063:96725-96744 Msa1357430:CDS 40.0%
AGCACCTTGCTAATCTTATC+AGG + tig0016063:96786-96805 None:intergenic 40.0%
ATGTCTATATGTTGGATCGC+AGG - tig0016063:97156-97175 Msa1357430:CDS 40.0%
TGTCTATATGTTGGATCGCA+GGG - tig0016063:97157-97176 Msa1357430:CDS 40.0%
AAGAAAATCTCGTTGAGCCA+AGG + tig0016063:97301-97320 None:intergenic 40.0%
ACCCTACCTATGACCAACTA+TGG - tig0016063:91971-91990 Msa1357430:three_prime_UTR 45.0%
CCCATAGTTGGTCATAGGTA+GGG + tig0016063:91975-91994 None:intergenic 45.0%
CCCTACCTATGACCAACTAT+GGG - tig0016063:91972-91991 Msa1357430:three_prime_UTR 45.0%
TCTTTAGCGTAAGGGTGAGA+CGG + tig0016063:92012-92031 None:intergenic 45.0%
TCTCACCCTTACGCTAAAGA+CGG - tig0016063:92012-92031 Msa1357430:three_prime_UTR 45.0%
GCTAAACCGTCTTTAGCGTA+AGG + tig0016063:92021-92040 None:intergenic 45.0%
GTTTGTGGTTACGCATACCT+TGG + tig0016063:92044-92063 None:intergenic 45.0%
GGTATGCGTAACCACAAACT+TGG - tig0016063:92045-92064 Msa1357430:three_prime_UTR 45.0%
CTTCGACGAAACCAAGTTTG+TGG + tig0016063:92059-92078 None:intergenic 45.0%
AGCAGCGTTATTCTTCTGCA+AGG + tig0016063:92187-92206 None:intergenic 45.0%
CGACGAAAATAACGACGAAG+AGG - tig0016063:92290-92309 Msa1357430:intron 45.0%
GATTGAGAATCCAGCTTCTG+AGG - tig0016063:92320-92339 Msa1357430:intron 45.0%
AATAAGAAGAGTCCTTGGGC+TGG - tig0016063:92357-92376 Msa1357430:intron 45.0%
ATAAGAAGAGTCCTTGGGCT+GGG - tig0016063:92358-92377 Msa1357430:intron 45.0%
GGGAAGAAGGAAGGTTTACA+AGG - tig0016063:92378-92397 Msa1357430:intron 45.0%
GGGATTATCAAGGTAGGTCT+TGG - tig0016063:92532-92551 Msa1357430:intron 45.0%
AGATTGGTGCATACTTGGAG+CGG - tig0016063:92609-92628 Msa1357430:intron 45.0%
ACTTGGAGCGGACATACAAA+AGG - tig0016063:92621-92640 Msa1357430:intron 45.0%
CTTGGAGCGGACATACAAAA+GGG - tig0016063:92622-92641 Msa1357430:intron 45.0%
TTGGAGCGGACATACAAAAG+GGG - tig0016063:92623-92642 Msa1357430:intron 45.0%
CAAAAGGGGTTTCTGCGATT+AGG - tig0016063:92637-92656 Msa1357430:intron 45.0%
TTTGATTCTCTCGGCTGGTA+TGG - tig0016063:92680-92699 Msa1357430:intron 45.0%
TGGGTCATTCCAAAGCTGTT+AGG - tig0016063:92760-92779 Msa1357430:intron 45.0%
GGGTCATTCCAAAGCTGTTA+GGG - tig0016063:92761-92780 Msa1357430:intron 45.0%
CGATATAACCTGCCCTGTTT+CGG + tig0016063:92859-92878 None:intergenic 45.0%
GTTATATCGACGTTCTCCAC+TGG - tig0016063:92870-92889 Msa1357430:intron 45.0%
AACATAAGGGATCTTCCCAG+TGG + tig0016063:92889-92908 None:intergenic 45.0%
TAGTGATGACAAGTCCCTCA+GGG - tig0016063:93082-93101 Msa1357430:intron 45.0%
! GAAGGCATAGAGTGCATATG+TGG + tig0016063:93152-93171 None:intergenic 45.0%
TTTGCTGGACACATTGTTGC+TGG - tig0016063:93278-93297 Msa1357430:intron 45.0%
TGTTGCTGGATATGCTTGTC+AGG - tig0016063:93292-93311 Msa1357430:intron 45.0%
GACATGACAAAACGTCCATC+CGG + tig0016063:93329-93348 None:intergenic 45.0%
! GGATGGACGTTTTGTCATGT+CGG - tig0016063:93328-93347 Msa1357430:intron 45.0%
! GATGGACGTTTTGTCATGTC+GGG - tig0016063:93329-93348 Msa1357430:intron 45.0%
!! TGAGGGTAAGTGTTGGTTCT+GGG - tig0016063:93358-93377 Msa1357430:intron 45.0%
!! GTAAGTGTTGGTTCTGGGAT+TGG - tig0016063:93363-93382 Msa1357430:intron 45.0%
AGAACTCTCAAGTGTCACGA+AGG - tig0016063:93404-93423 Msa1357430:intron 45.0%
GCAATGAGTAACTGACAGTG+AGG + tig0016063:93582-93601 None:intergenic 45.0%
TATTGGTCCAACAGTCTAGC+AGG - tig0016063:93754-93773 Msa1357430:intron 45.0%
GATGTGAAAGCCACTGTACA+TGG - tig0016063:93971-93990 Msa1357430:intron 45.0%
GCCAAGGTTGTGGATGAAAA+TGG + tig0016063:94139-94158 None:intergenic 45.0%
! TCGCACTAGTCATGCCATTT+AGG - tig0016063:94226-94245 Msa1357430:intron 45.0%
! CGCACTAGTCATGCCATTTA+GGG - tig0016063:94227-94246 Msa1357430:intron 45.0%
! GCACTAGTCATGCCATTTAG+GGG - tig0016063:94228-94247 Msa1357430:intron 45.0%
ACATAGGTTGCAGGAACAAG+GGG + tig0016063:94340-94359 None:intergenic 45.0%
GAACATAGGTTGCAGGAACA+AGG + tig0016063:94342-94361 None:intergenic 45.0%
CAACCTATGTTCAGCAGGAA+CGG - tig0016063:94350-94369 Msa1357430:intron 45.0%
CTTCGTACTTTGTGCAGAAG+GGG + tig0016063:94858-94877 None:intergenic 45.0%
GCTTCGTACTTTGTGCAGAA+GGG + tig0016063:94859-94878 None:intergenic 45.0%
AGCTTCGTACTTTGTGCAGA+AGG + tig0016063:94860-94879 None:intergenic 45.0%
!! GCTCATTAACTTGTGCCCTA+AGG - tig0016063:95193-95212 Msa1357430:intron 45.0%
! CATGCTAACTTGTGCCCTTA+GGG + tig0016063:95211-95230 None:intergenic 45.0%
! TCATGCTAACTTGTGCCCTT+AGG + tig0016063:95212-95231 None:intergenic 45.0%
!! GCTCATTAACTTGTGCCCTA+AGG - tig0016063:95193-95212 Msa1357430:intron 45.0%
! CATGCTAACTTGTGCCCTTA+GGG + tig0016063:95211-95230 None:intergenic 45.0%
! TCATGCTAACTTGTGCCCTT+AGG + tig0016063:95212-95231 None:intergenic 45.0%
ATGCCAACTGGCATTTACCA+TGG - tig0016063:95550-95569 Msa1357430:intron 45.0%
ATGCCATGGTAAATGCCAGT+TGG + tig0016063:95556-95575 None:intergenic 45.0%
! GCACCGATGTTACCACTAAT+GGG - tig0016063:95581-95600 Msa1357430:intron 45.0%
CACCGATGTTACCACTAATG+GGG - tig0016063:95582-95601 Msa1357430:intron 45.0%
GTCCCCATTAGTGGTAACAT+CGG + tig0016063:95587-95606 None:intergenic 45.0%
ACCCATAGAATCACAGGTCA+AGG - tig0016063:95630-95649 Msa1357430:intron 45.0%
CCCTTGACCTGTGATTCTAT+GGG + tig0016063:95634-95653 None:intergenic 45.0%
CCCATAGAATCACAGGTCAA+GGG - tig0016063:95631-95650 Msa1357430:intron 45.0%
ACCCTTGACCTGTGATTCTA+TGG + tig0016063:95635-95654 None:intergenic 45.0%
GCCAAGGTTTCAGATGAAAG+TGG - tig0016063:95701-95720 Msa1357430:intron 45.0%
! AATCATCTCGTTGGCCTCTT+GGG + tig0016063:96108-96127 None:intergenic 45.0%
TGAAAGGCTTCAGCTCAACA+TGG + tig0016063:96139-96158 None:intergenic 45.0%
GAACAAATCCATTGGGGATC+TGG + tig0016063:96176-96195 None:intergenic 45.0%
CTAATCCCACTAAGTGTGGT+CGG + tig0016063:96362-96381 None:intergenic 45.0%
AAGCCTAATCCCACTAAGTG+TGG + tig0016063:96366-96385 None:intergenic 45.0%
CACTTAGTGGGATTAGGCTT+TGG - tig0016063:96366-96385 Msa1357430:CDS 45.0%
GAAACTCAGGATGAATGGCA+TGG + tig0016063:96822-96841 None:intergenic 45.0%
TGTTCAATGATGCCTGTTGC+TGG - tig0016063:97188-97207 Msa1357430:CDS 45.0%
! TGCTACTTAGTTCCAGCAAC+AGG + tig0016063:97203-97222 None:intergenic 45.0%
CTGGAACTAAGTAGCAGAAG+CGG - tig0016063:97207-97226 Msa1357430:CDS 45.0%
TGGAACTAAGTAGCAGAAGC+GGG - tig0016063:97208-97227 Msa1357430:CDS 45.0%
CCACTATGTTGCTACTCCTT+TGG + tig0016063:97256-97275 None:intergenic 45.0%
CCAAAGGAGTAGCAACATAG+TGG - tig0016063:97253-97272 Msa1357430:exon 45.0%
GCCCATAGTTGGTCATAGGT+AGG + tig0016063:91976-91995 None:intergenic 50.0%
CTTTAGCGTAAGGGTGAGAC+GGG + tig0016063:92011-92030 None:intergenic 50.0%
GCTAAAGACGGTTTAGCCCA+AGG - tig0016063:92024-92043 Msa1357430:three_prime_UTR 50.0%
TCTTCTTCTGTTCGCGGTGT+GGG + tig0016063:92224-92243 None:intergenic 50.0%
AATAACCACGCCTCAGAAGC+TGG + tig0016063:92333-92352 None:intergenic 50.0%
GGTCATTTGATTCTCTCGGC+TGG - tig0016063:92675-92694 Msa1357430:intron 50.0%
CTCGGCTGGTATGGATACTA+AGG - tig0016063:92689-92708 Msa1357430:intron 50.0%
TGTGAAGCTTAACCCGGATG+AGG - tig0016063:92908-92927 Msa1357430:intron 50.0%
CTAGTGATGACAAGTCCCTC+AGG - tig0016063:93081-93100 Msa1357430:intron 50.0%
ATGACAAGTCCCTCAGGGTA+TGG - tig0016063:93087-93106 Msa1357430:intron 50.0%
TGACAAGTCCCTCAGGGTAT+GGG - tig0016063:93088-93107 Msa1357430:intron 50.0%
ACCATACTCCCATACCCTGA+GGG + tig0016063:93099-93118 None:intergenic 50.0%
TACCATACTCCCATACCCTG+AGG + tig0016063:93100-93119 None:intergenic 50.0%
! ATGGGAGTATGGTATTCCCG+TGG - tig0016063:93106-93125 Msa1357430:intron 50.0%
TTGGGGTGAAGCGAAATGGA+AGG + tig0016063:93170-93189 None:intergenic 50.0%
! CAGGTCAATTTTTCGCCGGA+TGG - tig0016063:93311-93330 Msa1357430:intron 50.0%
! CGTTTTGTCATGTCGGGAGA+TGG - tig0016063:93335-93354 Msa1357430:intron 50.0%
GAGATGGTGAGGGTAAGTGT+TGG - tig0016063:93351-93370 Msa1357430:intron 50.0%
!! GTGAGGGTAAGTGTTGGTTC+TGG - tig0016063:93357-93376 Msa1357430:intron 50.0%
!! TGTCACGAAGGCGTTACCAT+CGG - tig0016063:93416-93435 Msa1357430:intron 50.0%
! GCTACTTTGCTCTGTTCCAG+AGG + tig0016063:93455-93474 None:intergenic 50.0%
!! GGGACGGGTTGATAAAGTAC+TGG - tig0016063:93486-93505 Msa1357430:intron 50.0%
CATGTCTCCTGCTAGACTGT+TGG + tig0016063:93764-93783 None:intergenic 50.0%
GTCTAGCAGGAGACATGTGA+AGG - tig0016063:93767-93786 Msa1357430:intron 50.0%
! GAAAGTGTGTGCCAAGGTTG+TGG + tig0016063:94149-94168 None:intergenic 50.0%
GTTGGCTATGTTGCCAGTAG+CGG - tig0016063:94267-94286 Msa1357430:intron 50.0%
GTGCAATCGTGCGTGATAAC+AGG - tig0016063:94289-94308 Msa1357430:intron 50.0%
CGTGCGTGATAACAGGATAG+TGG - tig0016063:94296-94315 Msa1357430:intron 50.0%
TCCTGCAACCTATGTTCAGC+AGG - tig0016063:94345-94364 Msa1357430:intron 50.0%
TCCTGCTGAACATAGGTTGC+AGG + tig0016063:94349-94368 None:intergenic 50.0%
ATGCCGTTCCTGCTGAACAT+AGG + tig0016063:94356-94375 None:intergenic 50.0%
TTCAGCAGGAACGGCATTTG+CGG - tig0016063:94359-94378 Msa1357430:intron 50.0%
TGCGATTTCATCGCGATTCG+CGG + tig0016063:94385-94404 None:intergenic 50.0%
TCTTTCTCGTCTGCCGTCTA+GGG - tig0016063:94415-94434 Msa1357430:intron 50.0%
TTTCACCCTCGAACCCTAGA+CGG + tig0016063:94431-94450 None:intergenic 50.0%
! CAGCTTTGTAGCTTTGCGCA+GGG + tig0016063:94832-94851 None:intergenic 50.0%
! ACAGCTTTGTAGCTTTGCGC+AGG + tig0016063:94833-94852 None:intergenic 50.0%
! CATCGGTGCCTAATATGCCA+TGG + tig0016063:95570-95589 None:intergenic 50.0%
!! GGCACCGATGTTACCACTAA+TGG - tig0016063:95580-95599 Msa1357430:intron 50.0%
! CAATCATCTCGTTGGCCTCT+TGG + tig0016063:96109-96128 None:intergenic 50.0%
GGATTCAGCTTGGGAGTGAA+AGG + tig0016063:96155-96174 None:intergenic 50.0%
TGGGGATCTGGATTCAGCTT+GGG + tig0016063:96164-96183 None:intergenic 50.0%
TTGGGGATCTGGATTCAGCT+TGG + tig0016063:96165-96184 None:intergenic 50.0%
AGCTGAATCCAGATCCCCAA+TGG - tig0016063:96165-96184 Msa1357430:CDS 50.0%
AGCTGGCTGCCACATTCAAA+AGG + tig0016063:96207-96226 None:intergenic 50.0%
ACTAAGTGTGGTCGGCTACA+TGG + tig0016063:96354-96373 None:intergenic 50.0%
ATGTAGCCGACCACACTTAG+TGG - tig0016063:96353-96372 Msa1357430:CDS 50.0%
TGTAGCCGACCACACTTAGT+GGG - tig0016063:96354-96373 Msa1357430:CDS 50.0%
CGACCACACTTAGTGGGATT+AGG - tig0016063:96360-96379 Msa1357430:CDS 50.0%
CTCTTCTTCTGTTCGCGGTG+TGG + tig0016063:92225-92244 None:intergenic 55.0%
CACACCGCGAACAGAAGAAG+AGG - tig0016063:92223-92242 Msa1357430:intron 55.0%
!! AGAATCCAGCTTCTGAGGCG+TGG - tig0016063:92325-92344 Msa1357430:intron 55.0%
! GAGGAGCACGCCAAGAAGAA+AGG - tig0016063:92432-92451 Msa1357430:intron 55.0%
CTCGCCTTAGCATCTTTCGG+AGG + tig0016063:92564-92583 None:intergenic 55.0%
TTGGGATACCGAAACAGGGC+AGG - tig0016063:92848-92867 Msa1357430:intron 55.0%
TCCCTCAGGGTATGGGAGTA+TGG - tig0016063:93095-93114 Msa1357430:intron 55.0%
CTGGTTATCCAAGCTCTGCG+CGG + tig0016063:93207-93226 None:intergenic 55.0%
TGTCATGTCGGGAGATGGTG+AGG - tig0016063:93340-93359 Msa1357430:intron 55.0%
GTCATGTCGGGAGATGGTGA+GGG - tig0016063:93341-93360 Msa1357430:intron 55.0%
TCTGTTCCAGAGGATGCCAC+TGG + tig0016063:93445-93464 None:intergenic 55.0%
CAGAGCAAAGTAGCGACGTG+TGG - tig0016063:93461-93480 Msa1357430:intron 55.0%
CAAAGTAGCGACGTGTGGCT+GGG - tig0016063:93466-93485 Msa1357430:intron 55.0%
CTCTTTCTCGTCTGCCGTCT+AGG - tig0016063:94414-94433 Msa1357430:intron 55.0%
CCAGGCTAAACATGAGGAGC+TGG + tig0016063:96224-96243 None:intergenic 55.0%
CCAGCTCCTCATGTTTAGCC+TGG - tig0016063:96221-96240 Msa1357430:CDS 55.0%
CCACAGCTCCAGATTAGACC+AGG + tig0016063:96242-96261 None:intergenic 55.0%
! CCTGGTCTAATCTGGAGCTG+TGG - tig0016063:96239-96258 Msa1357430:CDS 55.0%
CGGGTAGACAGAACACCACA+TGG - tig0016063:97227-97246 Msa1357430:CDS 55.0%
GAACACCACATGGCGACCAA+AGG - tig0016063:97237-97256 Msa1357430:CDS 55.0%
CTACTCCTTTGGTCGCCATG+TGG + tig0016063:97245-97264 None:intergenic 55.0%
GGGGGCCCATAGTTGGTCAT+AGG + tig0016063:91980-91999 None:intergenic 60.0%
CTTGGATGGGGGCCCATAGT+TGG + tig0016063:91987-92006 None:intergenic 60.0%
CAACTATGGGCCCCCATCCA+AGG - tig0016063:91985-92004 Msa1357430:three_prime_UTR 60.0%
! GAGTCCTTGGGCTGGGAAGA+AGG - tig0016063:92365-92384 Msa1357430:intron 60.0%
CCTTCCTTCTTCCCAGCCCA+AGG + tig0016063:92372-92391 None:intergenic 60.0%
! CCTTGGGCTGGGAAGAAGGA+AGG - tig0016063:92369-92388 Msa1357430:intron 60.0%
CGCGCCTCCGAAAGATGCTA+AGG - tig0016063:92557-92576 Msa1357430:intron 60.0%
CGCGTTGGGGTGAAGCGAAA+TGG + tig0016063:93174-93193 None:intergenic 60.0%
CGCTTCACCCCAACGCGAAT+TGG - tig0016063:93177-93196 Msa1357430:intron 60.0%
! GCGTTACCATCGGTTGCCAG+TGG - tig0016063:93426-93445 Msa1357430:intron 60.0%
AGGATGCCACTGGCAACCGA+TGG + tig0016063:93435-93454 None:intergenic 60.0%
GCAAAGTAGCGACGTGTGGC+TGG - tig0016063:93465-93484 Msa1357430:intron 60.0%
ACGCACGATTGCACCGCTAC+TGG + tig0016063:94283-94302 None:intergenic 60.0%
! GTCTGCCGTCTAGGGTTCGA+GGG - tig0016063:94423-94442 Msa1357430:intron 60.0%
GTGAGACGGGCCTTGGATGG+GGG + tig0016063:91998-92017 None:intergenic 65.0%
GGTGAGACGGGCCTTGGATG+GGG + tig0016063:91999-92018 None:intergenic 65.0%
GGGTGAGACGGGCCTTGGAT+GGG + tig0016063:92000-92019 None:intergenic 65.0%
AGGGTGAGACGGGCCTTGGA+TGG + tig0016063:92001-92020 None:intergenic 65.0%
CGTAAGGGTGAGACGGGCCT+TGG + tig0016063:92005-92024 None:intergenic 65.0%
CGGCGAGCCAATTCGCGTTG+GGG + tig0016063:93187-93206 None:intergenic 65.0%
GCGGCGAGCCAATTCGCGTT+GGG + tig0016063:93188-93207 None:intergenic 65.0%
CGGTTGCCAGTGGCATCCTC+TGG - tig0016063:93436-93455 Msa1357430:intron 65.0%
GTAGCGACGTGTGGCTGGGA+CGG - tig0016063:93470-93489 Msa1357430:intron 65.0%
TAGCGACGTGTGGCTGGGAC+GGG - tig0016063:93471-93490 Msa1357430:intron 65.0%
! CGTCTGCCGTCTAGGGTTCG+AGG - tig0016063:94422-94441 Msa1357430:intron 65.0%
CGCGGCGAGCCAATTCGCGT+TGG + tig0016063:93189-93208 None:intergenic 70.0%
! TTGGCTCGCCGCGCAGAGCT+TGG - tig0016063:93196-93215 Msa1357430:intron 70.0%
Chromosome Type Strat End Strand Name
tig0016063 gene 91966 97340 91966 ID=Msa1357430;Name=Msa1357430
tig0016063 mRNA 91966 97340 91966 ID=Msa1357430-mRNA-1;Parent=Msa1357430;Name=Msa1357430-mRNA-1;_AED=0.01;_eAED=0.01;_QI=82|0|0.5|1|0|0.5|2|143|493
tig0016063 exon 91966 92128 91966 ID=Msa1357430-mRNA-1:exon:10381;Parent=Msa1357430-mRNA-1
tig0016063 exon 95797 97340 95797 ID=Msa1357430-mRNA-1:exon:10380;Parent=Msa1357430-mRNA-1
tig0016063 five_prime_UTR 97259 97340 97259 ID=Msa1357430-mRNA-1:five_prime_utr;Parent=Msa1357430-mRNA-1
tig0016063 CDS 95797 97258 95797 ID=Msa1357430-mRNA-1:cds;Parent=Msa1357430-mRNA-1
tig0016063 CDS 92109 92128 92109 ID=Msa1357430-mRNA-1:cds;Parent=Msa1357430-mRNA-1
tig0016063 three_prime_UTR 91966 92108 91966 ID=Msa1357430-mRNA-1:three_prime_utr;Parent=Msa1357430-mRNA-1
Gene Sequence

>Msa1357430

ATGCGTAACCACAAACTTGGTTTCGTCGAAGATGCTAACATTGAACCTTTCCTCTTTGATGAACAGCATAACACCTTTTTAAAATTCGGTTACGCTGCTGATCCTTCTGCGTTAAATTACATCGGTGATTTCGATGCCTTGCAGAAGAATAACGCTGCTTCTGTTTACAATATCCCACACCGCGAACAGAAGAAGAGGAAAATTGAATCCCTTAAGAAGAAAGAAGAGAATGATGATGAAGACGACGAAAATAACGACGAAGAGGGTGTTGAGATTGAGAATCCAGCTTCTGAGGCGTGGTTATTGAAGAATAAGAAGAGTCCTTGGGCTGGGAAGAAGGAAGGTTTACAAGGAGAGTTAACGGAAGATCAGAAGAAATACGCTGAGGAGCACGCCAAGAAGAAAGGCGAAGAAAAAAGTGGTTTTGGTGGTGAAAAAGTTGAGGCTGTTAAGGATAAGAGTACTTTTCATGGGAAAGAGGAAAGGGATTATCAAGGTAGGTCTTGGATCGCGCCTCCGAAAGATGCTAAGGCGAGTAATGATCATTGTTTTATACCAAAGAGATTGGTGCATACTTGGAGCGGACATACAAAAGGGGTTTCTGCGATTAGGTTTTTTCCGAATTCGGGTCATTTGATTCTCTCGGCTGGTATGGATACTAAGGTTAAGATTTGGGATGTTTTCAACACTGGTAAATGTATGAGGACTTACATGGGTCATTCCAAAGCTGTTAGGGATATTTGTTTTACTAATGATGGAACAAAGTTTTTGAGTGCTGGTTATGATAAGAATATTAAGTATTGGGATACCGAAACAGGGCAGGTTATATCGACGTTCTCCACTGGGAAGATCCCTTATGTTGTGAAGCTTAACCCGGATGAGGATAAACAGAATGTTTTGTTGGCTGGTATGAGTGATAAGAAGATTGTTCAGTGGGATATGAATACAGGGCAGATAACTCAAGAGTATGATCAGCATTTGGGGGCTGTCAATACCATTACTTTTGTTGATAACAACAGGAGATTTGTTACTTCTAGTGATGACAAGTCCCTCAGGGTATGGGAGTATGGTATTCCCGTGGTTATAAAGTATATTAGTGAGCCACATATGCACTCTATGCCTTCCATTTCGCTTCACCCCAACGCGAATTGGCTCGCCGCGCAGAGCTTGGATAACCAGATTCTTATTTATAGCACAAGGGAGAAGTTTCAACTTAACAAAAAGAAGAGGTTTGCTGGACACATTGTTGCTGGATATGCTTGTCAGGTCAATTTTTCGCCGGATGGACGTTTTGTCATGTCGGGAGATGGTGAGGGTAAGTGTTGGTTCTGGGATTGGAAGAGTTGCAAAGTCTTTAGAACTCTCAAGTGTCACGAAGGCGTTACCATCGGTTGCCAGTGGCATCCTCTGGAACAGAGCAAAGTAGCGACGTGTGGCTGGGACGGGTTGATAAAGTACTGGTGGACTAGTTCTGTTCAATGA
Protein sequence

>Msa1357430

MRNHKLGFVEDANIEPFLFDEQHNTFLKFGYAADPSALNYIGDFDALQKNNAASVYNIPHREQKKRKIESLKKKEENDDEDDENNDEEGVEIENPASEAWLLKNKKSPWAGKKEGLQGELTEDQKKYAEEHAKKKGEEKSGFGGEKVEAVKDKSTFHGKEERDYQGRSWIAPPKDAKASNDHCFIPKRLVHTWSGHTKGVSAIRFFPNSGHLILSAGMDTKVKIWDVFNTGKCMRTYMGHSKAVRDICFTNDGTKFLSAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISLHPNANWLAAQSLDNQILIYSTREKFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVTIGCQWHPLEQSKVATCGWDGLIKYWWTSSVQ*