AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0754920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754920 MtrunA17_Chr5g0399801 96.602 1089 36 1 1 1088 1 1089 0.0 2158
Msa0754920 MtrunA17_Chr4g0003501 71.790 1067 188 10 23 1088 1 955 0.0 1444
Msa0754920 MtrunA17_Chr4g0003511 69.843 1081 210 14 23 1088 73 1052 0.0 1409
Msa0754920 MtrunA17_Chr7g0232811 44.090 533 211 10 576 1088 74 539 2.36e-131 409
Msa0754920 MtrunA17_Chr8g0354821 39.761 586 305 14 532 1085 116 685 5.62e-125 398
Msa0754920 MtrunA17_Chr3g0080761 41.111 540 296 14 567 1087 127 663 1.21e-122 391
Msa0754920 MtrunA17_Chr7g0252211 42.553 517 261 13 603 1088 246 757 2.09e-118 382
Msa0754920 MtrunA17_Chr6g0476121 42.604 507 258 11 611 1088 141 643 5.23e-118 378
Msa0754920 MtrunA17_Chr7g0232981 42.105 532 212 11 570 1088 68 516 1.30e-117 372
Msa0754920 MtrunA17_Chr6g0476111 41.811 519 265 12 603 1088 180 694 1.46e-115 373
Msa0754920 MtrunA17_Chr7g0255181 39.962 523 279 17 580 1087 202 704 2.91e-115 372
Msa0754920 MtrunA17_Chr8g0368901 42.174 460 244 8 617 1057 299 755 4.06e-115 374
Msa0754920 MtrunA17_Chr7g0232841 41.948 534 207 13 576 1088 77 528 2.05e-114 364
Msa0754920 MtrunA17_Chr8g0368911 41.342 462 249 8 615 1057 290 748 2.48e-112 367
Msa0754920 MtrunA17_Chr1g0170651 41.373 539 257 11 576 1088 41 546 4.79e-111 357
Msa0754920 MtrunA17_Chr1g0163051 39.000 500 283 9 581 1064 158 651 3.63e-110 357
Msa0754920 MtrunA17_Chr8g0369301 41.048 458 250 7 618 1057 280 735 9.37e-108 353
Msa0754920 MtrunA17_Chr6g0467381 39.316 468 245 12 615 1057 109 562 8.68e-95 313
Msa0754920 MtrunA17_Chr6g0467421 39.103 468 246 12 615 1057 109 562 1.00e-94 313
Msa0754920 MtrunA17_Chr6g0467531 38.889 468 247 12 615 1057 109 562 1.81e-94 312
Msa0754920 MtrunA17_Chr6g0467401 39.103 468 246 12 615 1057 109 562 8.39e-93 308
Msa0754920 MtrunA17_Chr1g0163041 37.791 516 276 17 581 1064 68 570 7.45e-91 303
Msa0754920 MtrunA17_Chr3g0094881 36.454 502 262 15 585 1057 148 621 9.51e-87 293
Msa0754920 MtrunA17_Chr6g0467411 34.510 510 267 14 584 1057 2 480 1.60e-77 263
Msa0754920 MtrunA17_Chr2g0306961 34.394 503 254 15 581 1057 9 461 5.66e-74 253
Msa0754920 MtrunA17_Chr5g0403241 34.954 329 150 9 801 1088 1202 1507 2.26e-44 176
Msa0754920 MtrunA17_Chr7g0232751 57.522 113 44 1 980 1088 7 119 1.55e-37 136
Msa0754920 MtrunA17_Chr4g0075321 38.182 220 107 5 875 1088 868 1064 3.32e-37 152
Msa0754920 MtrunA17_Chr8g0373821 33.871 310 149 12 806 1083 248 533 4.16e-36 144
Msa0754920 MtrunA17_Chr7g0232861 39.037 187 93 4 576 758 73 242 2.48e-32 126
Msa0754920 MtrunA17_Chr1g0183321 30.606 330 159 11 808 1083 428 741 9.84e-32 133
Msa0754920 MtrunA17_Chr1g0190311 28.286 350 162 9 801 1086 318 642 3.36e-30 128
Msa0754920 MtrunA17_Chr7g0232761 38.191 199 94 6 576 766 90 267 4.75e-30 120
Msa0754920 MtrunA17_Chr7g0262001 27.108 332 162 9 810 1083 388 697 3.03e-27 119
Msa0754920 MtrunA17_Chr7g0232871 46.667 105 27 1 865 969 2 77 2.13e-23 96.3
Msa0754920 MtrunA17_Chr2g0305371 28.875 329 151 15 779 1087 206 471 3.72e-20 95.5
Msa0754920 MtrunA17_Chr1g0201621 33.333 195 92 8 893 1084 61 220 4.26e-19 92.0
Msa0754920 MtrunA17_Chr1g0201311 32.821 195 93 8 893 1084 61 220 1.47e-18 90.1
Msa0754920 MtrunA17_Chr6g0477001 30.303 198 104 6 890 1087 87 250 3.15e-18 87.4
Msa0754920 MtrunA17_Chr3g0125251 34.694 196 84 7 898 1087 1307 1464 4.69e-18 90.5
Msa0754920 MtrunA17_Chr6g0460921 29.461 241 126 10 853 1087 217 419 4.39e-15 79.0
Msa0754920 MtrunA17_Chr5g0448331 33.333 153 91 3 643 787 267 416 1.63e-14 78.2
Msa0754920 MtrunA17_Chr8g0347071 33.333 156 66 5 914 1063 806 929 1.12e-12 72.8
Msa0754920 MtrunA17_Chr7g0235081 32.919 161 81 5 904 1063 182 316 8.10e-12 68.2
Msa0754920 MtrunA17_Chr7g0275611 32.051 156 68 5 914 1063 821 944 1.63e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754920 AT2G22740.2 64.054 523 171 8 581 1088 270 790 0.0 664
Msa0754920 AT2G22740.1 64.054 523 171 8 581 1088 270 790 0.0 664
Msa0754920 AT2G35160.2 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0754920 AT2G35160.3 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0754920 AT2G35160.1 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0754920 AT2G35160.4 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0754920 AT2G35160.5 61.047 516 167 5 580 1088 270 758 0.0 651
Msa0754920 AT5G04940.2 41.459 521 285 14 581 1087 155 669 1.62e-119 383
Msa0754920 AT5G04940.1 41.459 521 285 14 581 1087 155 669 1.62e-119 383
Msa0754920 AT5G13960.1 40.255 549 283 13 570 1088 91 624 6.38e-117 375
Msa0754920 AT5G13960.2 42.650 483 245 10 635 1088 11 490 7.26e-116 367
Msa0754920 AT1G73100.1 39.439 535 294 14 569 1087 148 668 1.44e-113 367
Msa0754920 AT4G13460.1 38.710 527 296 11 555 1062 123 641 2.47e-109 355
Msa0754920 AT4G13460.2 38.710 527 296 11 555 1062 123 641 2.47e-109 355
Msa0754920 AT2G33290.1 37.278 507 300 7 566 1057 134 637 3.52e-105 344
Msa0754920 AT2G33290.3 37.278 507 300 7 566 1057 134 637 3.52e-105 344
Msa0754920 AT2G33290.4 37.278 507 300 7 566 1057 134 637 3.52e-105 344
Msa0754920 AT2G33290.2 37.278 507 300 7 566 1057 134 637 3.52e-105 344
Msa0754920 AT1G17770.1 35.609 542 310 14 569 1087 167 692 4.28e-92 310
Msa0754920 AT2G24740.1 37.873 536 285 18 569 1087 250 754 6.27e-89 303
Msa0754920 AT5G47150.1 47.685 216 110 3 577 790 114 328 4.08e-52 186
Msa0754920 AT5G47160.1 33.691 466 237 17 328 782 3 407 5.15e-51 186
Msa0754920 AT5G47160.3 33.691 466 237 17 328 782 3 407 5.15e-51 186
Msa0754920 AT5G47160.2 33.691 466 237 17 328 782 3 407 5.15e-51 186
Msa0754920 AT2G23740.3 31.915 329 169 11 794 1087 1073 1381 7.97e-36 148
Msa0754920 AT2G23740.6 31.915 329 169 11 794 1087 1073 1381 7.97e-36 148
Msa0754920 AT2G23740.2 31.915 329 169 11 794 1087 1073 1381 7.97e-36 148
Msa0754920 AT2G23740.1 31.915 329 169 11 794 1087 1066 1374 9.41e-36 148
Msa0754920 AT3G04380.1 28.035 346 167 11 801 1086 137 460 1.51e-28 121
Msa0754920 AT3G04380.3 28.035 346 167 11 801 1086 121 444 1.63e-28 121
Msa0754920 AT3G04380.2 28.035 346 167 11 801 1086 110 433 1.72e-28 120
Msa0754920 AT3G04380.4 28.035 346 167 11 801 1086 137 460 2.02e-28 121
Msa0754920 AT3G04380.6 28.035 346 167 11 801 1086 110 433 2.12e-28 120
Msa0754920 AT3G04380.5 28.035 346 167 11 801 1086 94 417 2.64e-28 120
Msa0754920 AT2G05900.1 34.975 203 121 7 656 848 1 202 6.76e-28 115
Msa0754920 AT2G05900.1 39.286 84 43 2 1004 1087 236 311 4.62e-11 65.9
Msa0754920 AT2G23740.4 32.171 258 124 9 794 1016 1073 1314 2.18e-26 117
Msa0754920 AT2G23740.5 32.171 258 124 9 794 1016 1073 1314 2.18e-26 117
Msa0754920 AT1G04050.2 27.246 334 169 12 808 1086 407 721 9.79e-26 114
Msa0754920 AT1G04050.1 27.246 334 169 12 808 1086 407 721 9.79e-26 114
Msa0754920 AT1G04050.3 33.166 199 111 5 891 1086 438 617 1.76e-25 113
Msa0754920 AT5G43990.15 27.410 332 168 11 808 1086 396 707 2.44e-25 113
Msa0754920 AT5G43990.10 27.410 332 168 11 808 1086 396 707 2.44e-25 113
Msa0754920 AT5G43990.16 27.410 332 168 11 808 1086 373 684 2.50e-25 113
Msa0754920 AT5G43990.5 27.410 332 168 11 808 1086 373 684 2.50e-25 113
Msa0754920 AT5G43990.17 27.410 332 168 11 808 1086 373 684 2.50e-25 113
Msa0754920 AT5G43990.14 27.410 332 168 11 808 1086 373 684 2.50e-25 113
Msa0754920 AT5G43990.3 27.410 332 168 11 808 1086 393 704 2.76e-25 113
Msa0754920 AT5G43990.11 27.410 332 168 11 808 1086 393 704 2.76e-25 113
Msa0754920 AT5G43990.1 27.410 332 168 11 808 1086 393 704 2.76e-25 113
Msa0754920 AT5G43990.4 27.410 332 168 11 808 1086 393 704 2.76e-25 113
Msa0754920 AT5G43990.9 27.410 332 168 11 808 1086 416 727 3.12e-25 113
Msa0754920 AT5G43990.2 27.410 332 168 11 808 1086 416 727 3.12e-25 113
Msa0754920 AT5G43990.7 27.410 332 168 11 808 1086 304 615 5.00e-25 112
Msa0754920 AT5G43990.8 27.410 332 168 11 808 1086 324 635 5.27e-25 112
Msa0754920 AT5G43990.12 27.410 332 168 11 808 1086 324 635 5.27e-25 112
Msa0754920 AT5G43990.6 27.410 332 168 11 808 1086 324 635 5.27e-25 112
Msa0754920 AT5G43990.13 27.410 332 168 11 808 1086 324 635 5.27e-25 112
Msa0754920 AT3G03750.2 30.800 250 126 8 847 1087 138 349 2.25e-21 97.8
Msa0754920 AT1G76710.2 33.838 198 93 7 893 1087 66 228 7.97e-19 91.7
Msa0754920 AT1G76710.1 33.838 198 93 7 893 1087 66 228 7.97e-19 91.7
Msa0754920 AT4G30860.1 31.047 277 126 11 817 1087 247 464 8.06e-19 91.7
Msa0754920 AT1G76710.4 33.838 198 93 7 893 1087 66 228 9.76e-19 91.7
Msa0754920 AT1G76710.3 33.838 198 93 7 893 1087 66 228 1.10e-18 91.3
Msa0754920 AT1G77300.2 33.158 190 95 7 898 1087 1009 1166 3.32e-17 88.2
Msa0754920 AT1G77300.1 33.158 190 95 7 898 1087 1009 1166 5.00e-17 87.4
Msa0754920 AT3G59960.3 31.395 172 84 6 916 1087 112 249 4.41e-15 77.8
Msa0754920 AT3G59960.2 31.395 172 84 6 916 1087 112 249 4.41e-15 77.8
Msa0754920 AT3G59960.4 31.395 172 84 6 916 1087 112 249 4.41e-15 77.8
Msa0754920 AT1G57820.1 33.117 154 91 4 643 787 277 427 1.63e-14 78.6
Msa0754920 AT1G57820.3 33.117 154 91 4 643 787 277 427 1.63e-14 78.6
Msa0754920 AT1G57820.2 32.450 151 93 4 643 787 277 424 9.06e-14 76.3
Msa0754920 AT3G59960.1 31.395 172 84 6 916 1087 112 249 1.13e-13 73.9
Msa0754920 AT2G44150.1 29.070 172 88 6 916 1087 117 254 2.62e-13 73.2
Msa0754920 AT3G61740.2 35.032 157 63 6 914 1063 838 962 3.39e-13 74.7
Msa0754920 AT3G61740.1 35.032 157 63 6 914 1063 874 998 4.16e-13 74.3
Msa0754920 AT3G03750.1 27.600 250 118 10 847 1087 138 333 4.46e-13 72.4
Msa0754920 AT4G27910.1 31.098 164 70 6 926 1083 896 1022 3.40e-11 68.2

Find 265 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGATGTTGGTTTAAATT+TGG 0.118788 5_2:-8665907 None:intergenic
TCAATTGGATGTGCCTATTT+TGG 0.119192 5_2:+8665110 Msa0754920:CDS
TCAAGTGGATGGGGATATTT+TGG 0.160554 5_2:+8664978 Msa0754920:CDS
GAACATTCTGAAGAAGAATT+AGG 0.193360 5_2:+8664520 Msa0754920:CDS
ATGGATGTTGGTTTAAATTT+GGG 0.221824 5_2:-8665906 None:intergenic
ATCTTAGTTATGTATTTAAA+TGG 0.224199 5_2:-8666983 None:intergenic
TTTACATAACCACGTGGTTT+TGG 0.228610 5_2:-8666149 None:intergenic
CGTTCAAGCTTCTGATCTTC+TGG 0.239657 5_2:-8666629 None:intergenic
TTCAAACTACTTTCGAGTTC+TGG 0.240711 5_2:-8665807 None:intergenic
TGGCCTTCATCGCCAGATTC+AGG 0.250113 5_2:+8666463 Msa0754920:CDS
CTTGAACTTGAGTGCGAATC+TGG 0.264717 5_2:-8667439 None:intergenic
AGAATAGAGCTTAATATAAT+TGG 0.267824 5_2:+8666443 Msa0754920:CDS
GTTAAGAGCGGTGAAGATTT+AGG 0.271455 5_2:+8664676 Msa0754920:CDS
TCTTCGTTATTATCCAAAAT+AGG 0.293857 5_2:-8665123 None:intergenic
GGTGATCATAAAGGACATTC+TGG 0.295328 5_2:-8667558 None:intergenic
ATAGCTCCATTATGATTAAA+TGG 0.296004 5_2:-8667115 None:intergenic
TCCTTGAATTCCATCCCTTC+TGG 0.302980 5_2:+8667277 Msa0754920:CDS
TGCAACTAGTATTGTTGCTT+CGG 0.303684 5_2:+8666523 Msa0754920:CDS
GATTTAGGTGGTGGTGATTC+GGG 0.318391 5_2:+8664691 Msa0754920:CDS
GCAACTAGTATTGTTGCTTC+GGG 0.319658 5_2:+8666524 Msa0754920:CDS
TGAGTCATATTGGCAGGATA+TGG 0.322593 5_2:+8666769 Msa0754920:CDS
GTTGGAGGGCACTTGCATTT+AGG 0.324234 5_2:-8667172 None:intergenic
AAAGGCTGTAATTGTACTAA+TGG 0.324470 5_2:+8667040 Msa0754920:CDS
TGAAGACTGTAGCTTGAAAA+AGG 0.324757 5_2:+8664933 Msa0754920:CDS
CTCGACCTTAACGATGTTCA+TGG 0.325144 5_2:-8665757 None:intergenic
GGGCATGGAAGCTGTGGATA+TGG 0.325224 5_2:+8665032 Msa0754920:CDS
GGGAAGCCAGTGATGGTAAA+TGG 0.328236 5_2:+8664541 Msa0754920:CDS
TTAGTACAATTACAGCCTTT+TGG 0.332092 5_2:-8667037 None:intergenic
GGAACCACCTATATTGATAT+TGG 0.333643 5_2:-8665424 None:intergenic
GGAGACTTTGGATGCGGAAT+TGG 0.341628 5_2:+8665170 Msa0754920:CDS
TGAAGGAGGCTTTAACTAAA+AGG 0.341984 5_2:+8665457 Msa0754920:CDS
AAGATCATGGGATCTGTTCC+TGG 0.350847 5_2:+8666392 Msa0754920:CDS
AAAGGTGTACTAAATCATTC+TGG 0.352831 5_2:+8666008 Msa0754920:CDS
TTTGATTGAAAAGATGAATT+CGG 0.361033 5_2:+8664474 None:intergenic
AATCTATACCACCCTGAATC+TGG 0.365878 5_2:-8666475 None:intergenic
GAGATTCCATTTAATCATAA+TGG 0.367693 5_2:+8667109 Msa0754920:CDS
AACATTCTGAAGAAGAATTA+GGG 0.368058 5_2:+8664521 Msa0754920:CDS
AGATTTAGGTGGTGGTGATT+CGG 0.370179 5_2:+8664690 Msa0754920:CDS
CGGTATGGAAACTTCAGATA+TGG 0.371541 5_2:+8665296 Msa0754920:CDS
GACATTCTGGGCATAGAGAT+TGG 0.378566 5_2:-8667545 None:intergenic
TATGGTGTTCACAGCACATA+TGG 0.381418 5_2:-8666942 None:intergenic
CATGGTCTCATCTCATCAAT+TGG 0.383281 5_2:+8665095 Msa0754920:CDS
AGAATGATTTAGTACACCTT+TGG 0.384346 5_2:-8666006 None:intergenic
CCGGAAGAATGTGGACCGTT+TGG 0.384555 5_2:+8664628 Msa0754920:CDS
ACATTCTGGGCATAGAGATT+GGG 0.385745 5_2:-8667544 None:intergenic
TTTATGATCACCATGACAAC+AGG 0.387530 5_2:+8667569 Msa0754920:CDS
GATTCTTTCACATTTGACTT+TGG 0.398140 5_2:-8666302 None:intergenic
TCATTGTCCAATATCAATAT+AGG 0.398722 5_2:+8665417 Msa0754920:CDS
ACTTTCCGACGCTTAAACTT+AGG 0.400866 5_2:-8664586 None:intergenic
TTCTACAAACAGCTTGGAAC+AGG 0.402055 5_2:-8666253 None:intergenic
TCAAACTACTTTCGAGTTCT+GGG 0.404581 5_2:-8665806 None:intergenic
AAATGACGGACCTGCAGAAC+TGG 0.405443 5_2:+8665266 Msa0754920:CDS
GAAAGTAGTGCTAGGTTTGA+TGG 0.408534 5_2:+8665845 Msa0754920:CDS
TGAAGCTTCAAAAGTGGAAT+TGG 0.409850 5_2:+8665008 Msa0754920:CDS
TCAAATTGATGAGTCTACTT+TGG 0.415306 5_2:+8665242 Msa0754920:CDS
AAAATCAGCTTCAACAAAGT+TGG 0.420516 5_2:-8665643 None:intergenic
GCGAGGTCAAGAATTCTGTT+AGG 0.421124 5_2:+8666678 Msa0754920:CDS
TGTGGTTCTGTGGAATGTAC+TGG 0.421622 5_2:+8667718 Msa0754920:CDS
GCCAATCTCATCTCAGTAGA+TGG 0.421747 5_2:-8665702 None:intergenic
CACCCTGAATCTGGCGATGA+AGG 0.425090 5_2:-8666466 None:intergenic
ACTATCGATGCCGCTCAGTT+TGG 0.425253 5_2:+8667487 Msa0754920:CDS
TGTTGTCATGGTGATCATAA+AGG 0.429329 5_2:-8667567 None:intergenic
TCTATGAAGTTGAGTCATAT+TGG 0.437887 5_2:+8666759 Msa0754920:CDS
GACATAGCTACCTCGCCAAC+TGG 0.438153 5_2:-8665378 None:intergenic
ATTGGTGGGCATGGAGACTT+TGG 0.440213 5_2:+8665158 Msa0754920:CDS
TGCAATATTGTCCCTCCAAA+AGG 0.442817 5_2:+8667022 Msa0754920:CDS
GAGTCATATTGGCAGGATAT+GGG 0.443386 5_2:+8666770 Msa0754920:CDS
AGAAGATCAGAAGCTTGAAC+GGG 0.449548 5_2:+8666631 Msa0754920:CDS
GGAAGCTGTGGATATGGAAT+TGG 0.449691 5_2:+8665038 Msa0754920:CDS
GGCCAAGTCAGAATGTCCTT+GGG 0.450886 5_2:+8665866 Msa0754920:CDS
CAGGTCAACCAGAGCTTGCT+TGG 0.457769 5_2:+8666837 Msa0754920:CDS
TCTGTTCCTGGGGTTGAAGT+TGG 0.460888 5_2:+8666404 Msa0754920:CDS
TAAAACCAAGTCAATGGGAT+GGG 0.462217 5_2:+8667246 Msa0754920:CDS
CAAGCAAGCTCTGGTTGACC+TGG 0.465856 5_2:-8666836 None:intergenic
TGGCCAAGTCAGAATGTCCT+TGG 0.468262 5_2:+8665865 Msa0754920:CDS
AGTACCTTCCAAGCAAGCTC+TGG 0.469016 5_2:-8666845 None:intergenic
TCCAGAAGGGATGGAATTCA+AGG 0.469469 5_2:-8667278 None:intergenic
TATAATAGAGTCAGCCAACT+TGG 0.470293 5_2:+8667199 Msa0754920:CDS
GAGTCTCCATTTACCATCAC+TGG 0.471142 5_2:-8664547 None:intergenic
GGCCTTCATCGCCAGATTCA+GGG 0.471401 5_2:+8666464 Msa0754920:CDS
GGGACAATATTGCAACAATC+AGG 0.476635 5_2:-8667013 None:intergenic
GAATTCTGTTAGGGTGATAC+GGG 0.481274 5_2:+8666688 Msa0754920:CDS
GGCACTGGATAATCATCATC+AGG 0.481375 5_2:+8665722 Msa0754920:CDS
CAGAAGATCAGAAGCTTGAA+CGG 0.482485 5_2:+8666630 Msa0754920:CDS
TATGGGGCCACATGGGAAGC+TGG 0.483438 5_2:+8666787 Msa0754920:CDS
TGAGCCTGCAAAAGTGGAAT+TGG 0.486206 5_2:+8664876 Msa0754920:CDS
ACACTCATCCTGGCTGAGAC+GGG 0.486717 5_2:-8665544 None:intergenic
TCATCACAAACAGACATTGA+TGG 0.487558 5_2:-8664499 None:intergenic
AGAATTCTGTTAGGGTGATA+CGG 0.488400 5_2:+8666687 Msa0754920:CDS
ATCTTATATATCAGAGGCAC+CGG 0.488681 5_2:+8665353 Msa0754920:CDS
GCCGCTCAGTTTGGTAATGT+AGG 0.489767 5_2:+8667496 Msa0754920:CDS
AGAACTCGAAAGTAGTTTGA+AGG 0.490279 5_2:+8665809 Msa0754920:CDS
ATTTAGTACACCTTTGGACT+TGG 0.490483 5_2:-8666000 None:intergenic
CAACGATGAGCCTGCAAAAG+TGG 0.490787 5_2:+8664870 Msa0754920:CDS
GTCTCATCTCATCAAGTGGA+TGG 0.491155 5_2:+8664967 Msa0754920:CDS
GTTGAATATTTATGCCAAGT+TGG 0.491644 5_2:-8667213 None:intergenic
CCAAACGGTCCACATTCTTC+CGG 0.491712 5_2:-8664628 None:intergenic
GATATGGAATTTACAACAGA+AGG 0.491786 5_2:+8665312 Msa0754920:CDS
CCGACCAATGCCAGTTCTGC+AGG 0.494283 5_2:-8665276 None:intergenic
AACTAGTATTGTTGCTTCGG+GGG 0.494402 5_2:+8666526 Msa0754920:CDS
AGGGAATGCGGTCAAGAAGC+TGG 0.495760 5_2:+8665668 Msa0754920:CDS
GTTATGTATTTAAATGGAGG+GGG 0.500203 5_2:-8666977 None:intergenic
CTTGGTCGTAGTAATTTAAG+TGG 0.500245 5_2:+8666182 Msa0754920:CDS
TAATGAAGGGGAGAAGATCA+TGG 0.501403 5_2:+8666379 Msa0754920:CDS
TACTGAGATGAGATTGGCAC+TGG 0.503247 5_2:+8665707 Msa0754920:CDS
TGGCAGGATATGGGGCCACA+TGG 0.503771 5_2:+8666779 Msa0754920:CDS
CTGACTCTATTATAACAAGT+TGG 0.504283 5_2:-8667190 None:intergenic
CGCGTTGAAGATATTTCCTA+CGG 0.505475 5_2:+8666905 Msa0754920:CDS
TTTCGCTTGCGAAGAAAGCC+AGG 0.505946 5_2:+8666818 Msa0754920:CDS
AAAACTGACATTGGTGGGCA+TGG 0.507583 5_2:+8665149 Msa0754920:CDS
TAATCATCATCAGGTTAAAG+TGG 0.509315 5_2:+8665731 Msa0754920:CDS
AAAGGGAGCTATGTTAATGA+AGG 0.510173 5_2:+8666365 Msa0754920:CDS
TGTACTGGTAGGTTGTATTG+AGG 0.511536 5_2:+8667733 Msa0754920:CDS
AGCGGTGAAGATTTAGGTGG+TGG 0.513155 5_2:+8664682 Msa0754920:CDS
AAGGTGTACTAAATCATTCT+GGG 0.513245 5_2:+8666009 Msa0754920:CDS
AAATTTAAACCAACATCCAT+TGG 0.513515 5_2:+8665909 Msa0754920:CDS
TGATAGTCCCAACGACGAAA+AGG 0.515728 5_2:+8664720 Msa0754920:CDS
GCTACCTCGCCAACTGGAGC+CGG 0.515868 5_2:-8665372 None:intergenic
ATTGGTGGGCGTAGAAGCTA+TGG 0.516134 5_2:+8664894 Msa0754920:CDS
ACCATCTACTGAGATGAGAT+TGG 0.516227 5_2:+8665701 Msa0754920:CDS
GGAAACCATGAACATCGTTA+AGG 0.518098 5_2:+8665752 Msa0754920:CDS
TTGAGTGCGAATCTGGCAAA+AGG 0.518542 5_2:-8667432 None:intergenic
AATATCAATATAGGTGGTTC+CGG 0.518966 5_2:+8665426 Msa0754920:CDS
GTGATCATAAAGGACATTCT+GGG 0.521375 5_2:-8667557 None:intergenic
TCAACCAGAGCTTGCTTGGA+AGG 0.521651 5_2:+8666841 Msa0754920:CDS
CTTATCTGATCAAGTGGATG+TGG 0.522415 5_2:+8664837 Msa0754920:CDS
TACACCCCATCCCATTGACT+TGG 0.523806 5_2:-8667251 None:intergenic
TGAAGACTGTAGCTTGAGAA+AGG 0.523979 5_2:+8665065 Msa0754920:CDS
CGAGGTCAAGAATTCTGTTA+GGG 0.527113 5_2:+8666679 Msa0754920:CDS
TGAAGTTGAGTCATATTGGC+AGG 0.528849 5_2:+8666763 Msa0754920:CDS
CAATGCTCCCCGTCTCAGCC+AGG 0.529270 5_2:+8665536 Msa0754920:CDS
AAGGAAGCTGAACAAAGAAC+TGG 0.530093 5_2:+8667340 Msa0754920:CDS
CCGCTCAGTTTGGTAATGTA+GGG 0.531284 5_2:+8667497 Msa0754920:CDS
AGCTTCAAAAGTGGAATTGG+TGG 0.531376 5_2:+8665011 Msa0754920:CDS
AGATCATGGGATCTGTTCCT+GGG 0.531698 5_2:+8666393 Msa0754920:CDS
ATCGTAAGTCAGCTCTTGCA+AGG 0.532130 5_2:-8667632 None:intergenic
TAGTTATGTATTTAAATGGA+GGG 0.533607 5_2:-8666979 None:intergenic
ACTCTATTATAACAAGTTGG+AGG 0.533970 5_2:-8667187 None:intergenic
AAGGGAGCTATGTTAATGAA+GGG 0.535402 5_2:+8666366 Msa0754920:CDS
CCTAGCACTACTTTCCTGCC+TGG 0.535459 5_2:-8665837 None:intergenic
GCTCCTTTAGACACTCATCC+TGG 0.536997 5_2:-8665554 None:intergenic
AAAAGTGGAATTGGTGGGCA+TGG 0.537948 5_2:+8665017 Msa0754920:CDS
CATTCTGGGCATAGAGATTG+GGG 0.538907 5_2:-8667543 None:intergenic
CAACTAGTATTGTTGCTTCG+GGG 0.538994 5_2:+8666525 Msa0754920:CDS
TAACGATGAAGCTTCAAAAG+TGG 0.544439 5_2:+8665002 Msa0754920:CDS
GATACAAAACTGACATTGGT+GGG 0.544785 5_2:+8665144 Msa0754920:CDS
AAAGCTTTCTACAAACAGCT+TGG 0.545465 5_2:-8666259 None:intergenic
TGGATGTTGGTTTAAATTTG+GGG 0.545850 5_2:-8665905 None:intergenic
CTCATCTCATCAAGTGGATG+GGG 0.546998 5_2:+8664969 Msa0754920:CDS
AGTTATGTATTTAAATGGAG+GGG 0.547903 5_2:-8666978 None:intergenic
GATAAAACTTCCAGAAGGGA+TGG 0.548978 5_2:-8667287 None:intergenic
TTAGTTATGTATTTAAATGG+AGG 0.549426 5_2:-8666980 None:intergenic
TTAAAACCAAGTCAATGGGA+TGG 0.552622 5_2:+8667245 Msa0754920:CDS
CGAAGATACAAAACTGACAT+TGG 0.553321 5_2:+8665140 Msa0754920:CDS
TCTCATCTCATCAAGTGGAT+GGG 0.553872 5_2:+8664968 Msa0754920:CDS
AGCCTCCTTCATACAAGCAC+CGG 0.554334 5_2:-8665445 None:intergenic
GTTTGAAGGTCTCACCAGGC+AGG 0.555243 5_2:+8665823 Msa0754920:CDS
TTTAAACCAACATCCATTGG+TGG 0.555528 5_2:+8665912 Msa0754920:CDS
TGGTTCCGGTGCTTGTATGA+AGG 0.555754 5_2:+8665440 Msa0754920:CDS
CATGAACATCGTTAAGGTCG+AGG 0.556379 5_2:+8665758 Msa0754920:CDS
AACAACAGTAATCTTTGGGA+TGG 0.558592 5_2:+8667400 Msa0754920:CDS
AAGTGACTGTAGTTTGAAGA+AGG 0.559982 5_2:+8664801 Msa0754920:CDS
TCTGTACCACCAATGGATGT+TGG 0.560078 5_2:-8665918 None:intergenic
TATATTGATATTGGACAATG+AGG 0.560906 5_2:-8665415 None:intergenic
CAGCCAGGATGAGTGTCTAA+AGG 0.561581 5_2:+8665551 Msa0754920:CDS
AGAACTGGCATTGGTCGGTA+TGG 0.564148 5_2:+8665281 Msa0754920:CDS
AAATTCTAGTTCTGATGACA+TGG 0.567262 5_2:+8666058 Msa0754920:CDS
ATGAGAGTGACTCAGTGGCC+CGG 0.569197 5_2:+8666207 Msa0754920:CDS
CCTGTCATCTGTACCACCAA+TGG 0.569944 5_2:-8665925 None:intergenic
TGCTGACAGTACGAGTGTTG+AGG 0.570504 5_2:+8664654 Msa0754920:CDS
GACACTCATCCTGGCTGAGA+CGG 0.572210 5_2:-8665545 None:intergenic
ACTAGTATTGTTGCTTCGGG+GGG 0.573200 5_2:+8666527 Msa0754920:CDS
CCATTGGTGGTACAGATGAC+AGG 0.575959 5_2:+8665925 Msa0754920:CDS
AAAACCAAGTCAATGGGATG+GGG 0.578324 5_2:+8667247 Msa0754920:CDS
AAGCCTCTAGTCTATGAGTG+TGG 0.578730 5_2:+8667148 Msa0754920:CDS
TGGAGAGGTTCTTGAGGACA+AGG 0.580571 5_2:+8667321 Msa0754920:CDS
AGGGAGCTATGTTAATGAAG+GGG 0.580705 5_2:+8666367 Msa0754920:CDS
ATTGGTGGGCATGGAAGCTG+TGG 0.583994 5_2:+8665026 Msa0754920:CDS
GGGCATGGAGACTTTGGATG+CGG 0.586754 5_2:+8665164 Msa0754920:CDS
TGTGGTCTCATCTCATCAAG+TGG 0.587074 5_2:+8664963 Msa0754920:CDS
CGGACCTGCAGAACTGGCAT+TGG 0.588611 5_2:+8665272 Msa0754920:CDS
CACAGATAAAACTTCCAGAA+GGG 0.588807 5_2:-8667291 None:intergenic
GGCAGGATATGGGGCCACAT+GGG 0.589278 5_2:+8666780 Msa0754920:CDS
AGATACAAAACTGACATTGG+TGG 0.589399 5_2:+8665143 Msa0754920:CDS
ATGGTGTTCACAGCACATAT+GGG 0.589870 5_2:-8666941 None:intergenic
AGCCTCTAGTCTATGAGTGT+GGG 0.592603 5_2:+8667149 Msa0754920:CDS
TCACAGATAAAACTTCCAGA+AGG 0.593451 5_2:-8667292 None:intergenic
TCCCCAAGGACATTCTGACT+TGG 0.593577 5_2:-8665868 None:intergenic
GAGTCTACTTTGGCAAATGA+CGG 0.594825 5_2:+8665252 Msa0754920:CDS
TAAGTCAGCTCTTGCAAGGG+AGG 0.595124 5_2:-8667628 None:intergenic
CAATTGATGAGATGAGACCA+TGG 0.596287 5_2:-8665094 None:intergenic
CATGAGGAACCCTGTTGTCA+TGG 0.598124 5_2:-8667579 None:intergenic
AAGCAACAATACTAGTTGCA+AGG 0.598665 5_2:-8666520 None:intergenic
AGTAGTTTGAAGGTCTCACC+AGG 0.598759 5_2:+8665819 Msa0754920:CDS
TCAGAGGCACCGGCTCCAGT+TGG 0.598975 5_2:+8665363 Msa0754920:CDS
GGATGTTGGTTTAAATTTGG+GGG 0.601362 5_2:-8665904 None:intergenic
AGTCATATTGGCAGGATATG+GGG 0.602342 5_2:+8666771 Msa0754920:CDS
CCAGGCAGGAAAGTAGTGCT+AGG 0.602466 5_2:+8665837 Msa0754920:CDS
CTCTATTATAACAAGTTGGA+GGG 0.603275 5_2:-8667186 None:intergenic
AATGAAGGGGAGAAGATCAT+GGG 0.604075 5_2:+8666380 Msa0754920:CDS
TCATCACCAACTTCAACCCC+AGG 0.604148 5_2:-8666410 None:intergenic
TTATGTATTTAAATGGAGGG+GGG 0.605614 5_2:-8666976 None:intergenic
TTCCGACGCTTAAACTTAGG+CGG 0.605896 5_2:-8664583 None:intergenic
GCCTGCAAAAGTGGAATTGG+TGG 0.606392 5_2:+8664879 Msa0754920:CDS
AGATTTATCTTATATATCAG+AGG 0.608018 5_2:+8665347 Msa0754920:CDS
TTCCGGTGCTTGTATGAAGG+AGG 0.609421 5_2:+8665443 Msa0754920:CDS
CGGGGATCTGAATCAGCGGA+TGG 0.611571 5_2:+8666707 Msa0754920:CDS
TGTGGTCTTATCTGATCAAG+TGG 0.612824 5_2:+8664831 Msa0754920:CDS
TATCTGTGAATATATTGGAG+AGG 0.613185 5_2:+8667306 Msa0754920:CDS
GCTTCAAAAGTGGAATTGGT+GGG 0.613307 5_2:+8665012 Msa0754920:CDS
TGGTGGTACAGATGACAGGA+AGG 0.614455 5_2:+8665929 Msa0754920:CDS
AGAATTAGGGAAGCCAGTGA+TGG 0.615410 5_2:+8664534 Msa0754920:CDS
AATTGATGAGATGAGACCAT+GGG 0.617974 5_2:-8665093 None:intergenic
AGTGAAGTAGTGAATGATGT+TGG 0.618250 5_2:+8667460 Msa0754920:CDS
AGCAAGATATATGTTTACGA+TGG 0.618907 5_2:+8666734 Msa0754920:CDS
GGCACCGGCTCCAGTTGGCG+AGG 0.619867 5_2:+8665368 Msa0754920:CDS
CTTGAGAAAGGAAGATCCCA+TGG 0.621289 5_2:+8665077 Msa0754920:CDS
ATCCGCCTAAGTTTAAGCGT+CGG 0.622802 5_2:+8664581 Msa0754920:CDS
CACTCATCCTGGCTGAGACG+GGG 0.624068 5_2:-8665543 None:intergenic
TTATCTGATCAAGTGGATGT+GGG 0.624073 5_2:+8664838 Msa0754920:CDS
GCGTTGAAGATATTTCCTAC+GGG 0.625923 5_2:+8666906 Msa0754920:CDS
GGCCCACACTCATAGACTAG+AGG 0.626323 5_2:-8667151 None:intergenic
ATGAACATCGTTAAGGTCGA+GGG 0.630048 5_2:+8665759 Msa0754920:CDS
CAAATGTGAAAGAATCAAAG+AGG 0.632909 5_2:+8666309 Msa0754920:CDS
TTGTCCAATATCAATATAGG+TGG 0.635936 5_2:+8665420 Msa0754920:CDS
TGCTTTGAAGAATAGTAGCG+AGG 0.636465 5_2:+8666661 Msa0754920:CDS
CCTGCAGAACTGGCATTGGT+CGG 0.637297 5_2:+8665276 Msa0754920:CDS
ACTTGATCAGATAAGACCAC+AGG 0.642209 5_2:-8664829 None:intergenic
ACTTGATGAGATGAGACCAC+AGG 0.643420 5_2:-8664961 None:intergenic
AAAACTGCGACCAAGTCCAA+AGG 0.643866 5_2:+8665990 Msa0754920:CDS
CATGGGTCAATTAGTAACAC+GGG 0.644532 5_2:+8666076 Msa0754920:CDS
TTTGAAGAAGGAGGATCCTG+TGG 0.645117 5_2:+8664813 Msa0754920:CDS
TCGTAAGTCAGCTCTTGCAA+GGG 0.649908 5_2:-8667631 None:intergenic
AAATGTGAAAGAATCAAAGA+GGG 0.651541 5_2:+8666310 Msa0754920:CDS
GATCAAGTTCGTGATTCCGA+TGG 0.655471 5_2:+8667670 Msa0754920:CDS
ATATATTGGAGAGGTTCTTG+AGG 0.657084 5_2:+8667315 Msa0754920:CDS
AAGAGCGGTGAAGATTTAGG+TGG 0.661492 5_2:+8664679 Msa0754920:CDS
GATCATGGGATCTGTTCCTG+GGG 0.665855 5_2:+8666394 Msa0754920:CDS
GCCAAGTCAGAATGTCCTTG+GGG 0.668770 5_2:+8665867 Msa0754920:CDS
GTACTGTCAGCAGAACCAAA+CGG 0.668833 5_2:-8664643 None:intergenic
ACATGGGTCAATTAGTAACA+CGG 0.669242 5_2:+8666075 Msa0754920:CDS
CTTAAATTACTACGACCAAG+AGG 0.670569 5_2:-8666179 None:intergenic
CAGTGGCCCGGAATAAAGTG+AGG 0.675048 5_2:+8666219 Msa0754920:CDS
GTTCTGTGGAATGTACTGGT+AGG 0.675695 5_2:+8667722 Msa0754920:CDS
AATTCTAGTTCTGATGACAT+GGG 0.681067 5_2:+8666059 Msa0754920:CDS
GGTGGTACAGATGACAGGAA+GGG 0.684498 5_2:+8665930 Msa0754920:CDS
GCAGCAAATAACATGACATG+AGG 0.684985 5_2:-8667595 None:intergenic
TTGATATATACAGGGCAGGG+TGG 0.688777 5_2:+8666581 Msa0754920:CDS
TTATGATCACCATGACAACA+GGG 0.689712 5_2:+8667570 Msa0754920:CDS
GATACGGGGATCTGAATCAG+CGG 0.692287 5_2:+8666703 Msa0754920:CDS
TGACTGTAGTTTGAAGAAGG+AGG 0.692610 5_2:+8664804 Msa0754920:CDS
CCTGCAAAAGTGGAATTGGT+GGG 0.693752 5_2:+8664880 Msa0754920:CDS
TGGTCATGAGAGTGACTCAG+TGG 0.696808 5_2:+8666202 Msa0754920:CDS
GAAGATCAGAAGCTTGAACG+GGG 0.698030 5_2:+8666632 Msa0754920:CDS
ACGAGTGTTGAGGTTAAGAG+CGG 0.703079 5_2:+8664664 Msa0754920:CDS
AAAAGTGTCCCAAAACCACG+TGG 0.710733 5_2:+8666140 Msa0754920:CDS
CCCTACATTACCAAACTGAG+CGG 0.714684 5_2:-8667497 None:intergenic
GCATTGCGTCCACATAAACG+TGG 0.716479 5_2:-8665519 None:intergenic
TTATAAACCAGCTTCCCATG+TGG 0.718258 5_2:-8666794 None:intergenic
GAACAAATATCAGATCCCCA+AGG 0.723725 5_2:-8665882 None:intergenic
GTACACAAGAACATTTCTCG+TGG 0.725371 5_2:-8667072 None:intergenic
CTTCATCGCCAGATTCAGGG+TGG 0.729437 5_2:+8666467 Msa0754920:CDS
AAAACATTTACATAACCACG+TGG 0.753070 5_2:-8666155 None:intergenic
AATTCTGTTAGGGTGATACG+GGG 0.761052 5_2:+8666689 Msa0754920:CDS
ATTCTGGGCATAGAGATTGG+GGG 0.768685 5_2:-8667542 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAGATAAATCTTGTTTTA+CGG - chr5_2:8665340-8665359 None:intergenic 15.0%
!! ATCTTAGTTATGTATTTAAA+TGG - chr5_2:8666986-8667005 None:intergenic 15.0%
!! AGATTTATCTTATATATCAG+AGG + chr5_2:8665347-8665366 Msa0754920:CDS 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG - chr5_2:8666041-8666060 None:intergenic 20.0%
!!! AAGTGTTTGTTATTTTCATT+AGG - chr5_2:8666119-8666138 None:intergenic 20.0%
!! AGAATAGAGCTTAATATAAT+TGG + chr5_2:8666443-8666462 Msa0754920:CDS 20.0%
!! TTATATGAAGCAAAAAAACA+AGG + chr5_2:8666496-8666515 Msa0754920:CDS 20.0%
!! AAAAAGTTCAAAAAAAGAGA+AGG + chr5_2:8666878-8666897 Msa0754920:CDS 20.0%
!! TAGTTATGTATTTAAATGGA+GGG - chr5_2:8666982-8667001 None:intergenic 20.0%
!! TTAGTTATGTATTTAAATGG+AGG - chr5_2:8666983-8667002 None:intergenic 20.0%
!!! AATTTTTAAAACCAAGTCAA+TGG + chr5_2:8667240-8667259 Msa0754920:CDS 20.0%
!!! ATTTTTAAAACCAAGTCAAT+GGG + chr5_2:8667241-8667260 Msa0754920:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG + chr5_2:8667301-8667320 Msa0754920:CDS 20.0%
!! AACATTCTGAAGAAGAATTA+GGG + chr5_2:8664521-8664540 Msa0754920:CDS 25.0%
!! TCATTGAACTCAAAATTTTG+AGG - chr5_2:8664748-8664767 None:intergenic 25.0%
! TCTTCGTTATTATCCAAAAT+AGG - chr5_2:8665126-8665145 None:intergenic 25.0%
! TATATTGATATTGGACAATG+AGG - chr5_2:8665418-8665437 None:intergenic 25.0%
! TCATTGTCCAATATCAATAT+AGG + chr5_2:8665417-8665436 Msa0754920:CDS 25.0%
!!! ATGGATGTTGGTTTAAATTT+GGG - chr5_2:8665909-8665928 None:intergenic 25.0%
!!! AATGGATGTTGGTTTAAATT+TGG - chr5_2:8665910-8665929 None:intergenic 25.0%
! AAATTTAAACCAACATCCAT+TGG + chr5_2:8665909-8665928 Msa0754920:CDS 25.0%
!! TATGTAAATGTTTTTCCTCT+TGG + chr5_2:8666164-8666183 Msa0754920:CDS 25.0%
! AAATGTGAAAGAATCAAAGA+GGG + chr5_2:8666310-8666329 Msa0754920:CDS 25.0%
! ACAAGCTTCAAAAATACTTA+AGG + chr5_2:8666340-8666359 Msa0754920:CDS 25.0%
! TCAAAAATACTTAAGGAGAA+AGG + chr5_2:8666347-8666366 Msa0754920:CDS 25.0%
! CAAAAATACTTAAGGAGAAA+GGG + chr5_2:8666348-8666367 Msa0754920:CDS 25.0%
!!! CAGATGTTTTGATATATACA+GGG + chr5_2:8666573-8666592 Msa0754920:CDS 25.0%
! AGTTATGTATTTAAATGGAG+GGG - chr5_2:8666981-8667000 None:intergenic 25.0%
! GAGATTCCATTTAATCATAA+TGG + chr5_2:8667109-8667128 Msa0754920:CDS 25.0%
! ATAGCTCCATTATGATTAAA+TGG - chr5_2:8667118-8667137 None:intergenic 25.0%
!! GATGAGTATCTTTTTGATAT+TGG + chr5_2:8667367-8667386 Msa0754920:CDS 25.0%
! ACAAAAACAACAGTAATCTT+TGG + chr5_2:8667395-8667414 Msa0754920:CDS 25.0%
! CAAAAACAACAGTAATCTTT+GGG + chr5_2:8667396-8667415 Msa0754920:CDS 25.0%
!! TTTCTTTTTGATATTGCCAT+CGG - chr5_2:8667689-8667708 None:intergenic 25.0%
!!! AAAAAGAAATACTGCTTTTG+TGG + chr5_2:8667700-8667719 Msa0754920:CDS 25.0%
! GAACATTCTGAAGAAGAATT+AGG + chr5_2:8664520-8664539 Msa0754920:CDS 30.0%
TCAAATTGATGAGTCTACTT+TGG + chr5_2:8665242-8665261 Msa0754920:CDS 30.0%
GATATGGAATTTACAACAGA+AGG + chr5_2:8665312-8665331 Msa0754920:CDS 30.0%
TTGTCCAATATCAATATAGG+TGG + chr5_2:8665420-8665439 Msa0754920:CDS 30.0%
AATATCAATATAGGTGGTTC+CGG + chr5_2:8665426-8665445 Msa0754920:CDS 30.0%
!!! TGTTATTTTCTGCTTCTTGT+AGG - chr5_2:8665611-8665630 None:intergenic 30.0%
AAAATCAGCTTCAACAAAGT+TGG - chr5_2:8665646-8665665 None:intergenic 30.0%
!! TTTGTTGAAGCTGATTTTGA+AGG + chr5_2:8665648-8665667 Msa0754920:CDS 30.0%
!! TTGTTGAAGCTGATTTTGAA+GGG + chr5_2:8665649-8665668 Msa0754920:CDS 30.0%
TAATCATCATCAGGTTAAAG+TGG + chr5_2:8665731-8665750 Msa0754920:CDS 30.0%
!! TGGATGTTGGTTTAAATTTG+GGG - chr5_2:8665908-8665927 None:intergenic 30.0%
AGAATGATTTAGTACACCTT+TGG - chr5_2:8666009-8666028 None:intergenic 30.0%
! AAAGGTGTACTAAATCATTC+TGG + chr5_2:8666008-8666027 Msa0754920:CDS 30.0%
AAGGTGTACTAAATCATTCT+GGG + chr5_2:8666009-8666028 Msa0754920:CDS 30.0%
!! AAATTCTAGTTCTGATGACA+TGG + chr5_2:8666058-8666077 Msa0754920:CDS 30.0%
!! AATTCTAGTTCTGATGACAT+GGG + chr5_2:8666059-8666078 Msa0754920:CDS 30.0%
AAAACATTTACATAACCACG+TGG - chr5_2:8666158-8666177 None:intergenic 30.0%
! ATGTTTTCCTCACTTTATTC+CGG - chr5_2:8666229-8666248 None:intergenic 30.0%
! GATTCTTTCACATTTGACTT+TGG - chr5_2:8666305-8666324 None:intergenic 30.0%
CAAATGTGAAAGAATCAAAG+AGG + chr5_2:8666309-8666328 Msa0754920:CDS 30.0%
!!! GCAGATGTTTTGATATATAC+AGG + chr5_2:8666572-8666591 Msa0754920:CDS 30.0%
AGCAAGATATATGTTTACGA+TGG + chr5_2:8666734-8666753 Msa0754920:CDS 30.0%
TCTATGAAGTTGAGTCATAT+TGG + chr5_2:8666759-8666778 Msa0754920:CDS 30.0%
TTATGTATTTAAATGGAGGG+GGG - chr5_2:8666979-8666998 None:intergenic 30.0%
GTTATGTATTTAAATGGAGG+GGG - chr5_2:8666980-8666999 None:intergenic 30.0%
! TTAGTACAATTACAGCCTTT+TGG - chr5_2:8667040-8667059 None:intergenic 30.0%
AAAGGCTGTAATTGTACTAA+TGG + chr5_2:8667040-8667059 Msa0754920:CDS 30.0%
TGTTCTTGTGTACTCAAAAA+TGG + chr5_2:8667082-8667101 Msa0754920:CDS 30.0%
GTTCTTGTGTACTCAAAAAT+GGG + chr5_2:8667083-8667102 Msa0754920:CDS 30.0%
TTCTTGTGTACTCAAAAATG+GGG + chr5_2:8667084-8667103 Msa0754920:CDS 30.0%
! CTCTATTATAACAAGTTGGA+GGG - chr5_2:8667189-8667208 None:intergenic 30.0%
! ACTCTATTATAACAAGTTGG+AGG - chr5_2:8667190-8667209 None:intergenic 30.0%
CTGACTCTATTATAACAAGT+TGG - chr5_2:8667193-8667212 None:intergenic 30.0%
GTTGAATATTTATGCCAAGT+TGG - chr5_2:8667216-8667235 None:intergenic 30.0%
TATCTGTGAATATATTGGAG+AGG + chr5_2:8667306-8667325 Msa0754920:CDS 30.0%
TCATCACAAACAGACATTGA+TGG - chr5_2:8664502-8664521 None:intergenic 35.0%
AAGTGACTGTAGTTTGAAGA+AGG + chr5_2:8664801-8664820 Msa0754920:CDS 35.0%
TTATCTGATCAAGTGGATGT+GGG + chr5_2:8664838-8664857 Msa0754920:CDS 35.0%
TGAAGACTGTAGCTTGAAAA+AGG + chr5_2:8664933-8664952 Msa0754920:CDS 35.0%
TAACGATGAAGCTTCAAAAG+TGG + chr5_2:8665002-8665021 Msa0754920:CDS 35.0%
TGAAGCTTCAAAAGTGGAAT+TGG + chr5_2:8665008-8665027 Msa0754920:CDS 35.0%
AATTGATGAGATGAGACCAT+GGG - chr5_2:8665096-8665115 None:intergenic 35.0%
! TCAATTGGATGTGCCTATTT+TGG + chr5_2:8665110-8665129 Msa0754920:CDS 35.0%
CGAAGATACAAAACTGACAT+TGG + chr5_2:8665140-8665159 Msa0754920:CDS 35.0%
AGATACAAAACTGACATTGG+TGG + chr5_2:8665143-8665162 Msa0754920:CDS 35.0%
GATACAAAACTGACATTGGT+GGG + chr5_2:8665144-8665163 Msa0754920:CDS 35.0%
! ATCTTATATATCAGAGGCAC+CGG + chr5_2:8665353-8665372 Msa0754920:CDS 35.0%
GGAACCACCTATATTGATAT+TGG - chr5_2:8665427-8665446 None:intergenic 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG + chr5_2:8665457-8665476 Msa0754920:CDS 35.0%
! AGAGATTTTCCACGTTTATG+TGG + chr5_2:8665510-8665529 Msa0754920:CDS 35.0%
!! TCAAACTACTTTCGAGTTCT+GGG - chr5_2:8665809-8665828 None:intergenic 35.0%
!! TTCAAACTACTTTCGAGTTC+TGG - chr5_2:8665810-8665829 None:intergenic 35.0%
AGAACTCGAAAGTAGTTTGA+AGG + chr5_2:8665809-8665828 Msa0754920:CDS 35.0%
!! GGATGTTGGTTTAAATTTGG+GGG - chr5_2:8665907-8665926 None:intergenic 35.0%
TTTAAACCAACATCCATTGG+TGG + chr5_2:8665912-8665931 Msa0754920:CDS 35.0%
ATTTAGTACACCTTTGGACT+TGG - chr5_2:8666003-8666022 None:intergenic 35.0%
ACATGGGTCAATTAGTAACA+CGG + chr5_2:8666075-8666094 Msa0754920:CDS 35.0%
! TTACATAACCACGTGGTTTT+GGG - chr5_2:8666151-8666170 None:intergenic 35.0%
! TTTACATAACCACGTGGTTT+TGG - chr5_2:8666152-8666171 None:intergenic 35.0%
CTTAAATTACTACGACCAAG+AGG - chr5_2:8666182-8666201 None:intergenic 35.0%
CTTGGTCGTAGTAATTTAAG+TGG + chr5_2:8666182-8666201 Msa0754920:CDS 35.0%
! TGTTTTCCTCACTTTATTCC+GGG - chr5_2:8666228-8666247 None:intergenic 35.0%
AAAGCTTTCTACAAACAGCT+TGG - chr5_2:8666262-8666281 None:intergenic 35.0%
! TGTTTGTAGAAAGCTTTTGC+AGG + chr5_2:8666265-8666284 Msa0754920:CDS 35.0%
AAAGGGAGCTATGTTAATGA+AGG + chr5_2:8666365-8666384 Msa0754920:CDS 35.0%
AAGGGAGCTATGTTAATGAA+GGG + chr5_2:8666366-8666385 Msa0754920:CDS 35.0%
AAGCAACAATACTAGTTGCA+AGG - chr5_2:8666523-8666542 None:intergenic 35.0%
! TGCAACTAGTATTGTTGCTT+CGG + chr5_2:8666523-8666542 Msa0754920:CDS 35.0%
!!! TGTTTTGATATATACAGGGC+AGG + chr5_2:8666577-8666596 Msa0754920:CDS 35.0%
!! GTTTTGATATATACAGGGCA+GGG + chr5_2:8666578-8666597 Msa0754920:CDS 35.0%
AGAATTCTGTTAGGGTGATA+CGG + chr5_2:8666687-8666706 Msa0754920:CDS 35.0%
! TACAATTACAGCCTTTTGGA+GGG - chr5_2:8667036-8667055 None:intergenic 35.0%
TCTTGTGTACTCAAAAATGG+GGG + chr5_2:8667085-8667104 Msa0754920:CDS 35.0%
TATAATAGAGTCAGCCAACT+TGG + chr5_2:8667199-8667218 Msa0754920:CDS 35.0%
TTAAAACCAAGTCAATGGGA+TGG + chr5_2:8667245-8667264 Msa0754920:CDS 35.0%
TAAAACCAAGTCAATGGGAT+GGG + chr5_2:8667246-8667265 Msa0754920:CDS 35.0%
CACAGATAAAACTTCCAGAA+GGG - chr5_2:8667294-8667313 None:intergenic 35.0%
TCACAGATAAAACTTCCAGA+AGG - chr5_2:8667295-8667314 None:intergenic 35.0%
ATATATTGGAGAGGTTCTTG+AGG + chr5_2:8667315-8667334 Msa0754920:CDS 35.0%
! AACAACAGTAATCTTTGGGA+TGG + chr5_2:8667400-8667419 Msa0754920:CDS 35.0%
AGTGAAGTAGTGAATGATGT+TGG + chr5_2:8667460-8667479 Msa0754920:CDS 35.0%
GTGATCATAAAGGACATTCT+GGG - chr5_2:8667560-8667579 None:intergenic 35.0%
TGTTGTCATGGTGATCATAA+AGG - chr5_2:8667570-8667589 None:intergenic 35.0%
TTTATGATCACCATGACAAC+AGG + chr5_2:8667569-8667588 Msa0754920:CDS 35.0%
TTATGATCACCATGACAACA+GGG + chr5_2:8667570-8667589 Msa0754920:CDS 35.0%
ACTTTCCGACGCTTAAACTT+AGG - chr5_2:8664589-8664608 None:intergenic 40.0%
! TTCTGCTGTTCGTGATTTTC+CGG + chr5_2:8664609-8664628 Msa0754920:CDS 40.0%
GTTAAGAGCGGTGAAGATTT+AGG + chr5_2:8664676-8664695 Msa0754920:CDS 40.0%
! AGATTTAGGTGGTGGTGATT+CGG + chr5_2:8664690-8664709 Msa0754920:CDS 40.0%
TGACTGTAGTTTGAAGAAGG+AGG + chr5_2:8664804-8664823 Msa0754920:CDS 40.0%
ACTTGATCAGATAAGACCAC+AGG - chr5_2:8664832-8664851 None:intergenic 40.0%
!! TGTGGTCTTATCTGATCAAG+TGG + chr5_2:8664831-8664850 Msa0754920:CDS 40.0%
CTTATCTGATCAAGTGGATG+TGG + chr5_2:8664837-8664856 Msa0754920:CDS 40.0%
CTTGAAAAAGGAAGATCCTG+TGG + chr5_2:8664945-8664964 Msa0754920:CDS 40.0%
TCTCATCTCATCAAGTGGAT+GGG + chr5_2:8664968-8664987 Msa0754920:CDS 40.0%
! TCAAGTGGATGGGGATATTT+TGG + chr5_2:8664978-8664997 Msa0754920:CDS 40.0%
AGCTTCAAAAGTGGAATTGG+TGG + chr5_2:8665011-8665030 Msa0754920:CDS 40.0%
GCTTCAAAAGTGGAATTGGT+GGG + chr5_2:8665012-8665031 Msa0754920:CDS 40.0%
TGAAGACTGTAGCTTGAGAA+AGG + chr5_2:8665065-8665084 Msa0754920:CDS 40.0%
CAATTGATGAGATGAGACCA+TGG - chr5_2:8665097-8665116 None:intergenic 40.0%
CATGGTCTCATCTCATCAAT+TGG + chr5_2:8665095-8665114 Msa0754920:CDS 40.0%
GAGTCTACTTTGGCAAATGA+CGG + chr5_2:8665252-8665271 Msa0754920:CDS 40.0%
CGGTATGGAAACTTCAGATA+TGG + chr5_2:8665296-8665315 Msa0754920:CDS 40.0%
!!! AACGCTGCAACTTTTTTACG+AGG - chr5_2:8665489-8665508 None:intergenic 40.0%
!! AGCTGATTTTGAAGGGAATG+CGG + chr5_2:8665656-8665675 Msa0754920:CDS 40.0%
ACCATCTACTGAGATGAGAT+TGG + chr5_2:8665701-8665720 Msa0754920:CDS 40.0%
GGAAACCATGAACATCGTTA+AGG + chr5_2:8665752-8665771 Msa0754920:CDS 40.0%
ATGAACATCGTTAAGGTCGA+GGG + chr5_2:8665759-8665778 Msa0754920:CDS 40.0%
GAAAGTAGTGCTAGGTTTGA+TGG + chr5_2:8665845-8665864 Msa0754920:CDS 40.0%
GAACAAATATCAGATCCCCA+AGG - chr5_2:8665885-8665904 None:intergenic 40.0%
!! AGTTGATTTTTATGCCCACC+TGG + chr5_2:8665959-8665978 Msa0754920:CDS 40.0%
!!! CTCTTTTCTTTTTCAACGGC+TGG - chr5_2:8666037-8666056 None:intergenic 40.0%
CATGGGTCAATTAGTAACAC+GGG + chr5_2:8666076-8666095 Msa0754920:CDS 40.0%
TTCTACAAACAGCTTGGAAC+AGG - chr5_2:8666256-8666275 None:intergenic 40.0%
! TAGAAAGCTTTTGCAGGAAG+CGG + chr5_2:8666271-8666290 Msa0754920:CDS 40.0%
AGGGAGCTATGTTAATGAAG+GGG + chr5_2:8666367-8666386 Msa0754920:CDS 40.0%
TAATGAAGGGGAGAAGATCA+TGG + chr5_2:8666379-8666398 Msa0754920:CDS 40.0%
AATGAAGGGGAGAAGATCAT+GGG + chr5_2:8666380-8666399 Msa0754920:CDS 40.0%
AATCTATACCACCCTGAATC+TGG - chr5_2:8666478-8666497 None:intergenic 40.0%
! GCAACTAGTATTGTTGCTTC+GGG + chr5_2:8666524-8666543 Msa0754920:CDS 40.0%
! CAACTAGTATTGTTGCTTCG+GGG + chr5_2:8666525-8666544 Msa0754920:CDS 40.0%
! AACTAGTATTGTTGCTTCGG+GGG + chr5_2:8666526-8666545 Msa0754920:CDS 40.0%
CAGAAGATCAGAAGCTTGAA+CGG + chr5_2:8666630-8666649 Msa0754920:CDS 40.0%
AGAAGATCAGAAGCTTGAAC+GGG + chr5_2:8666631-8666650 Msa0754920:CDS 40.0%
!! TGCTTTGAAGAATAGTAGCG+AGG + chr5_2:8666661-8666680 Msa0754920:CDS 40.0%
CGAGGTCAAGAATTCTGTTA+GGG + chr5_2:8666679-8666698 Msa0754920:CDS 40.0%
GAATTCTGTTAGGGTGATAC+GGG + chr5_2:8666688-8666707 Msa0754920:CDS 40.0%
AATTCTGTTAGGGTGATACG+GGG + chr5_2:8666689-8666708 Msa0754920:CDS 40.0%
TGAAGTTGAGTCATATTGGC+AGG + chr5_2:8666763-8666782 Msa0754920:CDS 40.0%
TGAGTCATATTGGCAGGATA+TGG + chr5_2:8666769-8666788 Msa0754920:CDS 40.0%
GAGTCATATTGGCAGGATAT+GGG + chr5_2:8666770-8666789 Msa0754920:CDS 40.0%
AGTCATATTGGCAGGATATG+GGG + chr5_2:8666771-8666790 Msa0754920:CDS 40.0%
TTATAAACCAGCTTCCCATG+TGG - chr5_2:8666797-8666816 None:intergenic 40.0%
CGCGTTGAAGATATTTCCTA+CGG + chr5_2:8666905-8666924 Msa0754920:CDS 40.0%
GCGTTGAAGATATTTCCTAC+GGG + chr5_2:8666906-8666925 Msa0754920:CDS 40.0%
ATGGTGTTCACAGCACATAT+GGG - chr5_2:8666944-8666963 None:intergenic 40.0%
TATGGTGTTCACAGCACATA+TGG - chr5_2:8666945-8666964 None:intergenic 40.0%
GGGACAATATTGCAACAATC+AGG - chr5_2:8667016-8667035 None:intergenic 40.0%
TGCAATATTGTCCCTCCAAA+AGG + chr5_2:8667022-8667041 Msa0754920:CDS 40.0%
! GTACAATTACAGCCTTTTGG+AGG - chr5_2:8667037-8667056 None:intergenic 40.0%
GTACACAAGAACATTTCTCG+TGG - chr5_2:8667075-8667094 None:intergenic 40.0%
CTTGTGTACTCAAAAATGGG+GGG + chr5_2:8667086-8667105 Msa0754920:CDS 40.0%
TTGTGTACTCAAAAATGGGG+GGG + chr5_2:8667087-8667106 Msa0754920:CDS 40.0%
AAAACCAAGTCAATGGGATG+GGG + chr5_2:8667247-8667266 Msa0754920:CDS 40.0%
GATAAAACTTCCAGAAGGGA+TGG - chr5_2:8667290-8667309 None:intergenic 40.0%
AAGGAAGCTGAACAAAGAAC+TGG + chr5_2:8667340-8667359 Msa0754920:CDS 40.0%
ACATTCTGGGCATAGAGATT+GGG - chr5_2:8667547-8667566 None:intergenic 40.0%
GGTGATCATAAAGGACATTC+TGG - chr5_2:8667561-8667580 None:intergenic 40.0%
GCAGCAAATAACATGACATG+AGG - chr5_2:8667598-8667617 None:intergenic 40.0%
!! ATACTGCTTTTGTGGTTCTG+TGG + chr5_2:8667708-8667727 Msa0754920:CDS 40.0%
AGAATTAGGGAAGCCAGTGA+TGG + chr5_2:8664534-8664553 Msa0754920:CDS 45.0%
GAGTCTCCATTTACCATCAC+TGG - chr5_2:8664550-8664569 None:intergenic 45.0%
ATCCGCCTAAGTTTAAGCGT+CGG + chr5_2:8664581-8664600 Msa0754920:CDS 45.0%
TTCCGACGCTTAAACTTAGG+CGG - chr5_2:8664586-8664605 None:intergenic 45.0%
! CGTGATTTTCCGGAAGAATG+TGG + chr5_2:8664619-8664638 Msa0754920:CDS 45.0%
GTACTGTCAGCAGAACCAAA+CGG - chr5_2:8664646-8664665 None:intergenic 45.0%
!! ACGAGTGTTGAGGTTAAGAG+CGG + chr5_2:8664664-8664683 Msa0754920:CDS 45.0%
AAGAGCGGTGAAGATTTAGG+TGG + chr5_2:8664679-8664698 Msa0754920:CDS 45.0%
! GATTTAGGTGGTGGTGATTC+GGG + chr5_2:8664691-8664710 Msa0754920:CDS 45.0%
TGATAGTCCCAACGACGAAA+AGG + chr5_2:8664720-8664739 Msa0754920:CDS 45.0%
! TGAGGATCCTTTTCGTCGTT+GGG - chr5_2:8664730-8664749 None:intergenic 45.0%
! TTGAGGATCCTTTTCGTCGT+TGG - chr5_2:8664731-8664750 None:intergenic 45.0%
TTTGAAGAAGGAGGATCCTG+TGG + chr5_2:8664813-8664832 Msa0754920:CDS 45.0%
TGAGCCTGCAAAAGTGGAAT+TGG + chr5_2:8664876-8664895 Msa0754920:CDS 45.0%
CCTGCAAAAGTGGAATTGGT+GGG + chr5_2:8664880-8664899 Msa0754920:CDS 45.0%
ACTTGATGAGATGAGACCAC+AGG - chr5_2:8664964-8664983 None:intergenic 45.0%
TGTGGTCTCATCTCATCAAG+TGG + chr5_2:8664963-8664982 Msa0754920:CDS 45.0%
GTCTCATCTCATCAAGTGGA+TGG + chr5_2:8664967-8664986 Msa0754920:CDS 45.0%
CTCATCTCATCAAGTGGATG+GGG + chr5_2:8664969-8664988 Msa0754920:CDS 45.0%
! AAAAGTGGAATTGGTGGGCA+TGG + chr5_2:8665017-8665036 Msa0754920:CDS 45.0%
GGAAGCTGTGGATATGGAAT+TGG + chr5_2:8665038-8665057 Msa0754920:CDS 45.0%
CTTGAGAAAGGAAGATCCCA+TGG + chr5_2:8665077-8665096 Msa0754920:CDS 45.0%
! AAAACTGACATTGGTGGGCA+TGG + chr5_2:8665149-8665168 Msa0754920:CDS 45.0%
!!! GCTGCAACTTTTTTACGAGG+AGG - chr5_2:8665486-8665505 None:intergenic 45.0%
GCCAATCTCATCTCAGTAGA+TGG - chr5_2:8665705-8665724 None:intergenic 45.0%
TACTGAGATGAGATTGGCAC+TGG + chr5_2:8665707-8665726 Msa0754920:CDS 45.0%
! GGCACTGGATAATCATCATC+AGG + chr5_2:8665722-8665741 Msa0754920:CDS 45.0%
CTCGACCTTAACGATGTTCA+TGG - chr5_2:8665760-8665779 None:intergenic 45.0%
CATGAACATCGTTAAGGTCG+AGG + chr5_2:8665758-8665777 Msa0754920:CDS 45.0%
AGTAGTTTGAAGGTCTCACC+AGG + chr5_2:8665819-8665838 Msa0754920:CDS 45.0%
TCTGTACCACCAATGGATGT+TGG - chr5_2:8665921-8665940 None:intergenic 45.0%
! ATTTTTATGCCCACCTGGAC+AGG + chr5_2:8665964-8665983 Msa0754920:CDS 45.0%
!!! AGTTTTAGACCTGTCCAGGT+GGG - chr5_2:8665976-8665995 None:intergenic 45.0%
AAAACTGCGACCAAGTCCAA+AGG + chr5_2:8665990-8666009 Msa0754920:CDS 45.0%
!! AAAAGTGTCCCAAAACCACG+TGG + chr5_2:8666140-8666159 Msa0754920:CDS 45.0%
AAGATCATGGGATCTGTTCC+TGG + chr5_2:8666392-8666411 Msa0754920:CDS 45.0%
AGATCATGGGATCTGTTCCT+GGG + chr5_2:8666393-8666412 Msa0754920:CDS 45.0%
! ACTAGTATTGTTGCTTCGGG+GGG + chr5_2:8666527-8666546 Msa0754920:CDS 45.0%
TTGATATATACAGGGCAGGG+TGG + chr5_2:8666581-8666600 Msa0754920:CDS 45.0%
CGTTCAAGCTTCTGATCTTC+TGG - chr5_2:8666632-8666651 None:intergenic 45.0%
GAAGATCAGAAGCTTGAACG+GGG + chr5_2:8666632-8666651 Msa0754920:CDS 45.0%
GCGAGGTCAAGAATTCTGTT+AGG + chr5_2:8666678-8666697 Msa0754920:CDS 45.0%
! GGGAATTTTCTCTTTCCCGT+AGG - chr5_2:8666924-8666943 None:intergenic 45.0%
AAGCCTCTAGTCTATGAGTG+TGG + chr5_2:8667148-8667167 Msa0754920:CDS 45.0%
AGCCTCTAGTCTATGAGTGT+GGG + chr5_2:8667149-8667168 Msa0754920:CDS 45.0%
TCCTTGAATTCCATCCCTTC+TGG + chr5_2:8667277-8667296 Msa0754920:CDS 45.0%
TCCAGAAGGGATGGAATTCA+AGG - chr5_2:8667281-8667300 None:intergenic 45.0%
TTGAGTGCGAATCTGGCAAA+AGG - chr5_2:8667435-8667454 None:intergenic 45.0%
CTTGAACTTGAGTGCGAATC+TGG - chr5_2:8667442-8667461 None:intergenic 45.0%
CCCTACATTACCAAACTGAG+CGG - chr5_2:8667500-8667519 None:intergenic 45.0%
!! CCGCTCAGTTTGGTAATGTA+GGG + chr5_2:8667497-8667516 Msa0754920:CDS 45.0%
ATTCTGGGCATAGAGATTGG+GGG - chr5_2:8667545-8667564 None:intergenic 45.0%
CATTCTGGGCATAGAGATTG+GGG - chr5_2:8667546-8667565 None:intergenic 45.0%
GACATTCTGGGCATAGAGAT+TGG - chr5_2:8667548-8667567 None:intergenic 45.0%
TCGTAAGTCAGCTCTTGCAA+GGG - chr5_2:8667634-8667653 None:intergenic 45.0%
ATCGTAAGTCAGCTCTTGCA+AGG - chr5_2:8667635-8667654 None:intergenic 45.0%
GATCAAGTTCGTGATTCCGA+TGG + chr5_2:8667670-8667689 Msa0754920:CDS 45.0%
! TGTGGTTCTGTGGAATGTAC+TGG + chr5_2:8667718-8667737 Msa0754920:CDS 45.0%
! GTTCTGTGGAATGTACTGGT+AGG + chr5_2:8667722-8667741 Msa0754920:CDS 45.0%
GGGAAGCCAGTGATGGTAAA+TGG + chr5_2:8664541-8664560 Msa0754920:CDS 50.0%
CCAAACGGTCCACATTCTTC+CGG - chr5_2:8664631-8664650 None:intergenic 50.0%
! TGCTGACAGTACGAGTGTTG+AGG + chr5_2:8664654-8664673 Msa0754920:CDS 50.0%
AGCGGTGAAGATTTAGGTGG+TGG + chr5_2:8664682-8664701 Msa0754920:CDS 50.0%
! CACTTTTGCAGGCTCATCGT+TGG - chr5_2:8664872-8664891 None:intergenic 50.0%
CAACGATGAGCCTGCAAAAG+TGG + chr5_2:8664870-8664889 Msa0754920:CDS 50.0%
GCCTGCAAAAGTGGAATTGG+TGG + chr5_2:8664879-8664898 Msa0754920:CDS 50.0%
!! CCCACCAATTCCACTTTTGC+AGG - chr5_2:8664883-8664902 None:intergenic 50.0%
! ATTGGTGGGCGTAGAAGCTA+TGG + chr5_2:8664894-8664913 Msa0754920:CDS 50.0%
! ATTGGTGGGCATGGAGACTT+TGG + chr5_2:8665158-8665177 Msa0754920:CDS 50.0%
GGAGACTTTGGATGCGGAAT+TGG + chr5_2:8665170-8665189 Msa0754920:CDS 50.0%
!! AAATGACGGACCTGCAGAAC+TGG + chr5_2:8665266-8665285 Msa0754920:CDS 50.0%
!! AGAACTGGCATTGGTCGGTA+TGG + chr5_2:8665281-8665300 Msa0754920:CDS 50.0%
TGGTTCCGGTGCTTGTATGA+AGG + chr5_2:8665440-8665459 Msa0754920:CDS 50.0%
TTCCGGTGCTTGTATGAAGG+AGG + chr5_2:8665443-8665462 Msa0754920:CDS 50.0%
AGCCTCCTTCATACAAGCAC+CGG - chr5_2:8665448-8665467 None:intergenic 50.0%
GCATTGCGTCCACATAAACG+TGG - chr5_2:8665522-8665541 None:intergenic 50.0%
CAGCCAGGATGAGTGTCTAA+AGG + chr5_2:8665551-8665570 Msa0754920:CDS 50.0%
GCTCCTTTAGACACTCATCC+TGG - chr5_2:8665557-8665576 None:intergenic 50.0%
TGGCCAAGTCAGAATGTCCT+TGG + chr5_2:8665865-8665884 Msa0754920:CDS 50.0%
GGCCAAGTCAGAATGTCCTT+GGG + chr5_2:8665866-8665885 Msa0754920:CDS 50.0%
GCCAAGTCAGAATGTCCTTG+GGG + chr5_2:8665867-8665886 Msa0754920:CDS 50.0%
TCCCCAAGGACATTCTGACT+TGG - chr5_2:8665871-8665890 None:intergenic 50.0%
CCTGTCATCTGTACCACCAA+TGG - chr5_2:8665928-8665947 None:intergenic 50.0%
! CCATTGGTGGTACAGATGAC+AGG + chr5_2:8665925-8665944 Msa0754920:CDS 50.0%
TGGTGGTACAGATGACAGGA+AGG + chr5_2:8665929-8665948 Msa0754920:CDS 50.0%
GGTGGTACAGATGACAGGAA+GGG + chr5_2:8665930-8665949 Msa0754920:CDS 50.0%
!!! CAGTTTTAGACCTGTCCAGG+TGG - chr5_2:8665977-8665996 None:intergenic 50.0%
!!! TCGCAGTTTTAGACCTGTCC+AGG - chr5_2:8665980-8665999 None:intergenic 50.0%
TGGTCATGAGAGTGACTCAG+TGG + chr5_2:8666202-8666221 Msa0754920:CDS 50.0%
GATCATGGGATCTGTTCCTG+GGG + chr5_2:8666394-8666413 Msa0754920:CDS 50.0%
TCTGTTCCTGGGGTTGAAGT+TGG + chr5_2:8666404-8666423 Msa0754920:CDS 50.0%
TCATCACCAACTTCAACCCC+AGG - chr5_2:8666413-8666432 None:intergenic 50.0%
GATACGGGGATCTGAATCAG+CGG + chr5_2:8666703-8666722 Msa0754920:CDS 50.0%
TTTCGCTTGCGAAGAAAGCC+AGG + chr5_2:8666818-8666837 Msa0754920:CDS 50.0%
! TCAACCAGAGCTTGCTTGGA+AGG + chr5_2:8666841-8666860 Msa0754920:CDS 50.0%
AGTACCTTCCAAGCAAGCTC+TGG - chr5_2:8666848-8666867 None:intergenic 50.0%
AGGGGGGTTCTCTTCATCTA+TGG - chr5_2:8666963-8666982 None:intergenic 50.0%
!! GTTGGAGGGCACTTGCATTT+AGG - chr5_2:8667175-8667194 None:intergenic 50.0%
! TACACCCCATCCCATTGACT+TGG - chr5_2:8667254-8667273 None:intergenic 50.0%
TGGAGAGGTTCTTGAGGACA+AGG + chr5_2:8667321-8667340 Msa0754920:CDS 50.0%
ACTATCGATGCCGCTCAGTT+TGG + chr5_2:8667487-8667506 Msa0754920:CDS 50.0%
!! GCCGCTCAGTTTGGTAATGT+AGG + chr5_2:8667496-8667515 Msa0754920:CDS 50.0%
AGAGATTGGGGGAGCAACTA+TGG - chr5_2:8667534-8667553 None:intergenic 50.0%
CATGAGGAACCCTGTTGTCA+TGG - chr5_2:8667582-8667601 None:intergenic 50.0%
TAAGTCAGCTCTTGCAAGGG+AGG - chr5_2:8667631-8667650 None:intergenic 50.0%
CCGGAAGAATGTGGACCGTT+TGG + chr5_2:8664628-8664647 Msa0754920:CDS 55.0%
! ATTGGTGGGCATGGAAGCTG+TGG + chr5_2:8665026-8665045 Msa0754920:CDS 55.0%
GGGCATGGAAGCTGTGGATA+TGG + chr5_2:8665032-8665051 Msa0754920:CDS 55.0%
GGGCATGGAGACTTTGGATG+CGG + chr5_2:8665164-8665183 Msa0754920:CDS 55.0%
!! CCTGCAGAACTGGCATTGGT+CGG + chr5_2:8665276-8665295 Msa0754920:CDS 55.0%
GACATAGCTACCTCGCCAAC+TGG - chr5_2:8665381-8665400 None:intergenic 55.0%
ACACTCATCCTGGCTGAGAC+GGG - chr5_2:8665547-8665566 None:intergenic 55.0%
GACACTCATCCTGGCTGAGA+CGG - chr5_2:8665548-8665567 None:intergenic 55.0%
AGGGAATGCGGTCAAGAAGC+TGG + chr5_2:8665668-8665687 Msa0754920:CDS 55.0%
GTTTGAAGGTCTCACCAGGC+AGG + chr5_2:8665823-8665842 Msa0754920:CDS 55.0%
CCTAGCACTACTTTCCTGCC+TGG - chr5_2:8665840-8665859 None:intergenic 55.0%
CCAGGCAGGAAAGTAGTGCT+AGG + chr5_2:8665837-8665856 Msa0754920:CDS 55.0%
ATGAGAGTGACTCAGTGGCC+CGG + chr5_2:8666207-8666226 Msa0754920:CDS 55.0%
CAGTGGCCCGGAATAAAGTG+AGG + chr5_2:8666219-8666238 Msa0754920:CDS 55.0%
TGGCCTTCATCGCCAGATTC+AGG + chr5_2:8666463-8666482 Msa0754920:CDS 55.0%
GGCCTTCATCGCCAGATTCA+GGG + chr5_2:8666464-8666483 Msa0754920:CDS 55.0%
CACCCTGAATCTGGCGATGA+AGG - chr5_2:8666469-8666488 None:intergenic 55.0%
CTTCATCGCCAGATTCAGGG+TGG + chr5_2:8666467-8666486 Msa0754920:CDS 55.0%
! CAAGCAAGCTCTGGTTGACC+TGG - chr5_2:8666839-8666858 None:intergenic 55.0%
! CAGGTCAACCAGAGCTTGCT+TGG + chr5_2:8666837-8666856 Msa0754920:CDS 55.0%
GGCCCACACTCATAGACTAG+AGG - chr5_2:8667154-8667173 None:intergenic 55.0%
CGGACCTGCAGAACTGGCAT+TGG + chr5_2:8665272-8665291 Msa0754920:CDS 60.0%
CCGACCAATGCCAGTTCTGC+AGG - chr5_2:8665279-8665298 None:intergenic 60.0%
CACTCATCCTGGCTGAGACG+GGG - chr5_2:8665546-8665565 None:intergenic 60.0%
CGGGGATCTGAATCAGCGGA+TGG + chr5_2:8666707-8666726 Msa0754920:CDS 60.0%
TGGCAGGATATGGGGCCACA+TGG + chr5_2:8666779-8666798 Msa0754920:CDS 60.0%
GGCAGGATATGGGGCCACAT+GGG + chr5_2:8666780-8666799 Msa0754920:CDS 60.0%
TATGGGGCCACATGGGAAGC+TGG + chr5_2:8666787-8666806 Msa0754920:CDS 60.0%
!! TCAGAGGCACCGGCTCCAGT+TGG + chr5_2:8665363-8665382 Msa0754920:CDS 65.0%
GCTACCTCGCCAACTGGAGC+CGG - chr5_2:8665375-8665394 None:intergenic 65.0%
CAATGCTCCCCGTCTCAGCC+AGG + chr5_2:8665536-8665555 Msa0754920:CDS 65.0%
!! GGCACCGGCTCCAGTTGGCG+AGG + chr5_2:8665368-8665387 Msa0754920:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 8664487 8667753 8664487 ID=Msa0754920;Name=Msa0754920
chr5_2 mRNA 8664487 8667753 8664487 ID=Msa0754920-mRNA-1;Parent=Msa0754920;Name=Msa0754920-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|1088
chr5_2 exon 8664487 8667753 8664487 ID=Msa0754920-mRNA-1:exon:3931;Parent=Msa0754920-mRNA-1
chr5_2 CDS 8664487 8667753 8664487 ID=Msa0754920-mRNA-1:cds;Parent=Msa0754920-mRNA-1
Gene Sequence

>Msa0754920

ATGAATTCGGAGCCATCAATGTCTGTTTGTGATGAACATTCTGAAGAAGAATTAGGGAAGCCAGTGATGGTAAATGGAGACTCAACTATTGTTGATCCGCCTAAGTTTAAGCGTCGGAAAGTTTCTGCTGTTCGTGATTTTCCGGAAGAATGTGGACCGTTTGGTTCTGCTGACAGTACGAGTGTTGAGGTTAAGAGCGGTGAAGATTTAGGTGGTGGTGATTCGGGTGAAGCTGATAGTCCCAACGACGAAAAGGATCCTCAAAATTTTGAGTTCAATGAAGATTTGTTTGTTGCAGACACTGTTGAACAAACAAGTGACTGTAGTTTGAAGAAGGAGGATCCTGTGGTCTTATCTGATCAAGTGGATGTGGGTAGTTTTGCCAACGATGAGCCTGCAAAAGTGGAATTGGTGGGCGTAGAAGCTATGGATATTAGTTTTGAAACTGAAGACTGTAGCTTGAAAAAGGAAGATCCTGTGGTCTCATCTCATCAAGTGGATGGGGATATTTTGGTTAACGATGAAGCTTCAAAAGTGGAATTGGTGGGCATGGAAGCTGTGGATATGGAATTGGAAACTGAAGACTGTAGCTTGAGAAAGGAAGATCCCATGGTCTCATCTCATCAATTGGATGTGCCTATTTTGGATAATAACGAAGATACAAAACTGACATTGGTGGGCATGGAGACTTTGGATGCGGAATTGGCAACTGAAAGCTGTAGTTTGAAGAACGAAAATGCAGCGATCTTATCTTATCAAATTGATGAGTCTACTTTGGCAAATGACGGACCTGCAGAACTGGCATTGGTCGGTATGGAAACTTCAGATATGGAATTTACAACAGAAGGCTCCGTAAAACAAGATTTATCTTATATATCAGAGGCACCGGCTCCAGTTGGCGAGGTAGCTATGTCTGATAACTCAAAATCCTCATTGTCCAATATCAATATAGGTGGTTCCGGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATCCTCCTCGTAAAAAAGTTGCAGCGTTAAGAGATTTTCCACGTTTATGTGGACGCAATGCTCCCCGTCTCAGCCAGGATGAGTGTCTAAAGGAGCTCGCTTCTTTGAAAGAAGTTGCAGCTACTGACCTACAAGAAGCAGAAAATAACAAAAGAAAGTTTGCCAACTTTGTTGAAGCTGATTTTGAAGGGAATGCGGTCAAGAAGCTGGATGTAGCTGAACCATCTACTGAGATGAGATTGGCACTGGATAATCATCATCAGGTTAAAGTGGAAACCATGAACATCGTTAAGGTCGAGGGAACATCAGAGCTAGATATTGATTACCCAGAACTCGAAAGTAGTTTGAAGGTCTCACCAGGCAGGAAAGTAGTGCTAGGTTTGATGGCCAAGTCAGAATGTCCTTGGGGATCTGATATTTGTTCCCCCAAATTTAAACCAACATCCATTGGTGGTACAGATGACAGGAAGGGAAAGAAAGTTGATTTTTATGCCCACCTGGACAGGTCTAAAACTGCGACCAAGTCCAAAGGTGTACTAAATCATTCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATGGGTCAATTAGTAACACGGGAGAAGAATTCTCTAGATCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAACCACGTGGTTATGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTAAGTGGTCATGAGAGTGACTCAGTGGCCCGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCAAGCTGTTTGTAGAAAGCTTTTGCAGGAAGCGGAAGCAAAACCAAAGTCAAATGTGAAAGAATCAAAGAGGGTTGATTTACAAGCTTCAAAAATACTTAAGGAGAAAGGGAGCTATGTTAATGAAGGGGAGAAGATCATGGGATCTGTTCCTGGGGTTGAAGTTGGTGATGAATTTCAATACAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATATGAAGCAAAAAAACAAGGTCCTTGCAACTAGTATTGTTGCTTCGGGGGGCTATGCTGATGACTTAGATAATGCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGCAATCTTGCTTTGAAGAATAGTAGCGAGGTCAAGAATTCTGTTAGGGTGATACGGGGATCTGAATCAGCGGATGGAAAAAGCAAGATATATGTTTACGATGGACTCTATGAAGTTGAGTCATATTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAAAGCCAGGTCAACCAGAGCTTGCTTGGAAGGTACTGAAGAAATCTAAAAAGTTCAAAAAAAGAGAAGGTGTACGCGTTGAAGATATTTCCTACGGGAAAGAGAAAATTCCCATATGTGCTGTGAACACCATAGATGAAGAGAACCCCCCTCCATTTAAATACATAACTAAGATGATGTATCCTGATTGTTGCAATATTGTCCCTCCAAAAGGCTGTAATTGTACTAATGGATGCTCTGACCACGAGAAATGTTCTTGTGTACTCAAAAATGGGGGGGAGATTCCATTTAATCATAATGGAGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGGCCTAAATGCAAGTGCCCTCCAACTTGTTATAATAGAGTCAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAAGTCAATGGGATGGGGTGTAAGATCCTTGAATTCCATCCCTTCTGGAAGTTTTATCTGTGAATATATTGGAGAGGTTCTTGAGGACAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACAAAAACAACAGTAATCTTTGGGATGGACTTTCGAACCTTTTGCCAGATTCGCACTCAAGTTCAAGTGAAGTAGTGAATGATGTTGGCTTCACTATCGATGCCGCTCAGTTTGGTAATGTAGGGAGATTCATTAACCATAGTTGCTCCCCCAATCTCTATGCCCAGAATGTCCTTTATGATCACCATGACAACAGGGTTCCTCATGTCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGATTACAATTACACGATAGATCAAGTTCGTGATTCCGATGGCAATATCAAAAAGAAATACTGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>Msa0754920

MNSEPSMSVCDEHSEEELGKPVMVNGDSTIVDPPKFKRRKVSAVRDFPEECGPFGSADSTSVEVKSGEDLGGGDSGEADSPNDEKDPQNFEFNEDLFVADTVEQTSDCSLKKEDPVVLSDQVDVGSFANDEPAKVELVGVEAMDISFETEDCSLKKEDPVVSSHQVDGDILVNDEASKVELVGMEAVDMELETEDCSLRKEDPMVSSHQLDVPILDNNEDTKLTLVGMETLDAELATESCSLKNENAAILSYQIDESTLANDGPAELALVGMETSDMEFTTEGSVKQDLSYISEAPAPVGEVAMSDNSKSSLSNINIGGSGACMKEALTKRYPPRKKVAALRDFPRLCGRNAPRLSQDECLKELASLKEVAATDLQEAENNKRKFANFVEADFEGNAVKKLDVAEPSTEMRLALDNHHQVKVETMNIVKVEGTSELDIDYPELESSLKVSPGRKVVLGLMAKSECPWGSDICSPKFKPTSIGGTDDRKGKKVDFYAHLDRSKTATKSKGVLNHSGHQPLKKKRENSSSDDMGQLVTREKNSLDPNENNKHFKSVPKPRGYVNVFPLGRSNLSGHESDSVARNKVRKTLRLFQAVCRKLLQEAEAKPKSNVKESKRVDLQASKILKEKGSYVNEGEKIMGSVPGVEVGDEFQYRIELNIIGLHRQIQGGIDYMKQKNKVLATSIVASGGYADDLDNADVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGSESADGKSKIYVYDGLYEVESYWQDMGPHGKLVYKFRLRRKPGQPELAWKVLKKSKKFKKREGVRVEDISYGKEKIPICAVNTIDEENPPPFKYITKMMYPDCCNIVPPKGCNCTNGCSDHEKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPPTCYNRVSQLGINIQLEIFKTKSMGWGVRSLNSIPSGSFICEYIGEVLEDKEAEQRTGNDEYLFDIGNNKNNSNLWDGLSNLLPDSHSSSSEVVNDVGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDNRVPHVMLFAAENIPPLQELTYDYNYTIDQVRDSDGNIKKKYCFCGSVECTGRLY*