AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0799330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799330 MtrunA17_Chr5g0399801 96.511 1089 37 1 1 1088 1 1089 0.0 2157
Msa0799330 MtrunA17_Chr4g0003501 71.978 1067 186 10 23 1088 1 955 0.0 1449
Msa0799330 MtrunA17_Chr4g0003511 69.935 1081 209 12 23 1088 73 1052 0.0 1413
Msa0799330 MtrunA17_Chr7g0232811 44.090 533 211 10 576 1088 74 539 2.88e-131 409
Msa0799330 MtrunA17_Chr8g0354821 39.761 586 305 14 532 1085 116 685 6.86e-125 397
Msa0799330 MtrunA17_Chr3g0080761 41.111 540 296 14 567 1087 127 663 1.69e-122 390
Msa0799330 MtrunA17_Chr7g0252211 42.553 517 261 13 603 1088 246 757 1.66e-118 383
Msa0799330 MtrunA17_Chr6g0476121 42.604 507 258 11 611 1088 141 643 6.93e-118 377
Msa0799330 MtrunA17_Chr7g0232981 42.105 532 212 11 570 1088 68 516 1.03e-117 373
Msa0799330 MtrunA17_Chr6g0476111 41.811 519 265 12 603 1088 180 694 2.28e-115 372
Msa0799330 MtrunA17_Chr7g0255181 39.962 523 279 17 580 1087 202 704 4.55e-115 372
Msa0799330 MtrunA17_Chr8g0368901 42.174 460 244 8 617 1057 299 755 5.15e-115 374
Msa0799330 MtrunA17_Chr7g0232841 41.948 534 207 13 576 1088 77 528 2.10e-114 364
Msa0799330 MtrunA17_Chr8g0368911 41.342 462 249 8 615 1057 290 748 4.46e-112 366
Msa0799330 MtrunA17_Chr1g0170651 41.373 539 257 11 576 1088 41 546 2.82e-111 357
Msa0799330 MtrunA17_Chr1g0163051 39.000 500 283 9 581 1064 158 651 3.59e-110 357
Msa0799330 MtrunA17_Chr8g0369301 41.048 458 250 7 618 1057 280 735 8.11e-108 354
Msa0799330 MtrunA17_Chr6g0467421 39.103 468 246 12 615 1057 109 562 8.16e-95 313
Msa0799330 MtrunA17_Chr6g0467381 39.316 468 245 12 615 1057 109 562 8.41e-95 313
Msa0799330 MtrunA17_Chr6g0467531 38.889 468 247 12 615 1057 109 562 2.27e-94 312
Msa0799330 MtrunA17_Chr6g0467401 39.103 468 246 12 615 1057 109 562 8.14e-93 308
Msa0799330 MtrunA17_Chr1g0163041 37.791 516 276 17 581 1064 68 570 9.22e-91 302
Msa0799330 MtrunA17_Chr3g0094881 36.454 502 262 15 585 1057 148 621 1.08e-86 293
Msa0799330 MtrunA17_Chr6g0467411 34.510 510 267 14 584 1057 2 480 1.59e-77 263
Msa0799330 MtrunA17_Chr2g0306961 34.394 503 254 15 581 1057 9 461 4.83e-74 253
Msa0799330 MtrunA17_Chr5g0403241 34.954 329 150 9 801 1088 1202 1507 2.73e-44 175
Msa0799330 MtrunA17_Chr7g0232751 57.522 113 44 1 980 1088 7 119 5.72e-38 138
Msa0799330 MtrunA17_Chr4g0075321 38.182 220 107 5 875 1088 868 1064 3.95e-37 152
Msa0799330 MtrunA17_Chr8g0373821 33.871 310 149 12 806 1083 248 533 4.23e-36 144
Msa0799330 MtrunA17_Chr7g0232861 39.037 187 93 4 576 758 73 242 2.76e-32 126
Msa0799330 MtrunA17_Chr1g0183321 30.606 330 159 11 808 1083 428 741 8.93e-32 133
Msa0799330 MtrunA17_Chr1g0190311 28.857 350 160 10 801 1086 318 642 3.77e-30 127
Msa0799330 MtrunA17_Chr7g0232761 38.191 199 94 6 576 766 90 267 4.89e-30 120
Msa0799330 MtrunA17_Chr7g0262001 27.108 332 162 9 810 1083 388 697 4.08e-27 118
Msa0799330 MtrunA17_Chr7g0232871 46.667 105 27 1 865 969 2 77 1.99e-23 96.3
Msa0799330 MtrunA17_Chr2g0305371 28.875 329 151 15 779 1087 206 471 3.75e-20 95.5
Msa0799330 MtrunA17_Chr1g0201621 33.333 195 92 8 893 1084 61 220 4.92e-19 91.7
Msa0799330 MtrunA17_Chr1g0201311 32.821 195 93 8 893 1084 61 220 1.42e-18 90.5
Msa0799330 MtrunA17_Chr6g0477001 30.303 198 104 6 890 1087 87 250 3.03e-18 87.4
Msa0799330 MtrunA17_Chr3g0125251 34.694 196 84 7 898 1087 1307 1464 5.50e-18 90.5
Msa0799330 MtrunA17_Chr6g0460921 29.461 241 126 10 853 1087 217 419 4.46e-15 79.0
Msa0799330 MtrunA17_Chr5g0448331 33.333 153 91 3 643 787 267 416 1.55e-14 78.2
Msa0799330 MtrunA17_Chr8g0347071 33.333 156 66 5 914 1063 806 929 1.31e-12 72.4
Msa0799330 MtrunA17_Chr7g0235081 32.919 161 81 5 904 1063 182 316 8.18e-12 68.2
Msa0799330 MtrunA17_Chr7g0275611 32.051 156 68 5 914 1063 821 944 1.63e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799330 AT2G22740.2 64.054 523 171 8 581 1088 270 790 0.0 664
Msa0799330 AT2G22740.1 64.054 523 171 8 581 1088 270 790 0.0 664
Msa0799330 AT2G35160.2 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0799330 AT2G35160.5 61.047 516 167 5 580 1088 270 758 0.0 652
Msa0799330 AT2G35160.3 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0799330 AT2G35160.1 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0799330 AT2G35160.4 61.047 516 167 5 580 1088 306 794 0.0 652
Msa0799330 AT5G04940.2 41.459 521 285 14 581 1087 155 669 1.16e-119 384
Msa0799330 AT5G04940.1 41.459 521 285 14 581 1087 155 669 1.16e-119 384
Msa0799330 AT5G13960.1 40.255 549 283 13 570 1088 91 624 7.16e-117 375
Msa0799330 AT5G13960.2 42.650 483 245 10 635 1088 11 490 8.41e-116 367
Msa0799330 AT1G73100.1 39.439 535 294 14 569 1087 148 668 2.26e-113 367
Msa0799330 AT4G13460.1 38.710 527 296 11 555 1062 123 641 2.18e-109 355
Msa0799330 AT4G13460.2 38.710 527 296 11 555 1062 123 641 2.18e-109 355
Msa0799330 AT2G33290.1 37.278 507 300 7 566 1057 134 637 3.24e-105 344
Msa0799330 AT2G33290.3 37.278 507 300 7 566 1057 134 637 3.24e-105 344
Msa0799330 AT2G33290.4 37.278 507 300 7 566 1057 134 637 3.24e-105 344
Msa0799330 AT2G33290.2 37.278 507 300 7 566 1057 134 637 3.24e-105 344
Msa0799330 AT1G17770.1 35.609 542 310 14 569 1087 167 692 4.41e-92 310
Msa0799330 AT2G24740.1 37.873 536 285 18 569 1087 250 754 5.73e-89 303
Msa0799330 AT5G47150.1 47.685 216 110 3 577 790 114 328 5.24e-52 186
Msa0799330 AT5G47160.1 33.691 466 237 17 328 782 3 407 7.19e-51 186
Msa0799330 AT5G47160.3 33.691 466 237 17 328 782 3 407 7.19e-51 186
Msa0799330 AT5G47160.2 33.691 466 237 17 328 782 3 407 7.19e-51 186
Msa0799330 AT2G23740.1 31.915 329 169 11 794 1087 1066 1374 8.28e-36 148
Msa0799330 AT2G23740.3 31.915 329 169 11 794 1087 1073 1381 8.68e-36 148
Msa0799330 AT2G23740.6 31.915 329 169 11 794 1087 1073 1381 8.68e-36 148
Msa0799330 AT2G23740.2 31.915 329 169 11 794 1087 1073 1381 8.68e-36 148
Msa0799330 AT3G04380.1 28.035 346 167 11 801 1086 137 460 1.51e-28 121
Msa0799330 AT3G04380.2 28.035 346 167 11 801 1086 110 433 1.54e-28 121
Msa0799330 AT3G04380.3 28.035 346 167 11 801 1086 121 444 1.57e-28 121
Msa0799330 AT3G04380.4 28.035 346 167 11 801 1086 137 460 1.72e-28 121
Msa0799330 AT3G04380.6 28.035 346 167 11 801 1086 110 433 2.39e-28 120
Msa0799330 AT3G04380.5 28.035 346 167 11 801 1086 94 417 2.79e-28 120
Msa0799330 AT2G05900.1 34.975 203 121 7 656 848 1 202 6.69e-28 115
Msa0799330 AT2G05900.1 39.286 84 43 2 1004 1087 236 311 4.88e-11 65.9
Msa0799330 AT2G23740.4 32.171 258 124 9 794 1016 1073 1314 2.09e-26 117
Msa0799330 AT2G23740.5 32.171 258 124 9 794 1016 1073 1314 2.09e-26 117
Msa0799330 AT1G04050.2 27.246 334 169 12 808 1086 407 721 1.08e-25 114
Msa0799330 AT1G04050.1 27.246 334 169 12 808 1086 407 721 1.08e-25 114
Msa0799330 AT1G04050.3 33.166 199 111 5 891 1086 438 617 1.90e-25 113
Msa0799330 AT5G43990.15 27.410 332 168 11 808 1086 396 707 2.66e-25 113
Msa0799330 AT5G43990.10 27.410 332 168 11 808 1086 396 707 2.66e-25 113
Msa0799330 AT5G43990.3 27.410 332 168 11 808 1086 393 704 2.81e-25 113
Msa0799330 AT5G43990.11 27.410 332 168 11 808 1086 393 704 2.81e-25 113
Msa0799330 AT5G43990.1 27.410 332 168 11 808 1086 393 704 2.81e-25 113
Msa0799330 AT5G43990.4 27.410 332 168 11 808 1086 393 704 2.81e-25 113
Msa0799330 AT5G43990.16 27.410 332 168 11 808 1086 373 684 2.83e-25 113
Msa0799330 AT5G43990.5 27.410 332 168 11 808 1086 373 684 2.83e-25 113
Msa0799330 AT5G43990.17 27.410 332 168 11 808 1086 373 684 2.83e-25 113
Msa0799330 AT5G43990.14 27.410 332 168 11 808 1086 373 684 2.83e-25 113
Msa0799330 AT5G43990.9 27.410 332 168 11 808 1086 416 727 2.92e-25 113
Msa0799330 AT5G43990.2 27.410 332 168 11 808 1086 416 727 2.92e-25 113
Msa0799330 AT5G43990.8 27.410 332 168 11 808 1086 324 635 5.32e-25 112
Msa0799330 AT5G43990.12 27.410 332 168 11 808 1086 324 635 5.32e-25 112
Msa0799330 AT5G43990.6 27.410 332 168 11 808 1086 324 635 5.32e-25 112
Msa0799330 AT5G43990.13 27.410 332 168 11 808 1086 324 635 5.32e-25 112
Msa0799330 AT5G43990.7 27.410 332 168 11 808 1086 304 615 5.96e-25 112
Msa0799330 AT3G03750.2 30.800 250 126 8 847 1087 138 349 2.05e-21 97.8
Msa0799330 AT4G30860.1 31.047 277 126 11 817 1087 247 464 8.65e-19 91.7
Msa0799330 AT1G76710.2 33.838 198 93 7 893 1087 66 228 9.35e-19 91.3
Msa0799330 AT1G76710.1 33.838 198 93 7 893 1087 66 228 9.35e-19 91.3
Msa0799330 AT1G76710.4 33.838 198 93 7 893 1087 66 228 1.12e-18 91.3
Msa0799330 AT1G76710.3 33.838 198 93 7 893 1087 66 228 1.28e-18 91.3
Msa0799330 AT1G77300.2 33.158 190 95 7 898 1087 1009 1166 3.90e-17 87.8
Msa0799330 AT1G77300.1 33.158 190 95 7 898 1087 1009 1166 5.54e-17 87.4
Msa0799330 AT3G59960.3 31.395 172 84 6 916 1087 112 249 4.57e-15 77.4
Msa0799330 AT3G59960.2 31.395 172 84 6 916 1087 112 249 4.57e-15 77.4
Msa0799330 AT3G59960.4 31.395 172 84 6 916 1087 112 249 4.57e-15 77.4
Msa0799330 AT1G57820.1 33.117 154 91 4 643 787 277 427 1.89e-14 78.6
Msa0799330 AT1G57820.3 33.117 154 91 4 643 787 277 427 1.89e-14 78.6
Msa0799330 AT1G57820.2 32.450 151 93 4 643 787 277 424 1.05e-13 75.9
Msa0799330 AT3G59960.1 31.395 172 84 6 916 1087 112 249 1.10e-13 73.9
Msa0799330 AT2G44150.1 29.070 172 88 6 916 1087 117 254 2.84e-13 73.2
Msa0799330 AT3G61740.2 35.032 157 63 6 914 1063 838 962 3.66e-13 74.7
Msa0799330 AT3G03750.1 27.600 250 118 10 847 1087 138 333 4.46e-13 72.4
Msa0799330 AT3G61740.1 35.032 157 63 6 914 1063 874 998 4.80e-13 74.3
Msa0799330 AT4G27910.1 31.098 164 70 6 926 1083 896 1022 3.46e-11 68.2

Find 268 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGATGTTGGTTTAAATT+TGG 0.118788 5_3:-12509352 None:intergenic
TCAATTGGATGTGCCTATTT+TGG 0.119192 5_3:+12508555 Msa0799330:CDS
TCAAGTGGATGGGGATATTT+TGG 0.160554 5_3:+12508423 Msa0799330:CDS
GAACATTCTGAAGAAGAATT+AGG 0.193360 5_3:+12507965 Msa0799330:CDS
ATGGATGTTGGTTTAAATTT+GGG 0.221824 5_3:-12509351 None:intergenic
ATCTTAGTTATGTATTTAAA+TGG 0.224199 5_3:-12510428 None:intergenic
TTTACATAACCACGTGGTTT+TGG 0.228610 5_3:-12509594 None:intergenic
CGTTCAAGCTTCTGATCTTC+TGG 0.239657 5_3:-12510074 None:intergenic
TTCAAACTACTTTCGAGTTC+TGG 0.240711 5_3:-12509252 None:intergenic
GTTAAGAGTGGTGAAGATTT+AGG 0.245357 5_3:+12508121 Msa0799330:CDS
TGGCCTTCATCGCCAGATTC+AGG 0.250113 5_3:+12509908 Msa0799330:CDS
CTTGAACTTGAGTGCGAATC+TGG 0.264717 5_3:-12510884 None:intergenic
AGAATAGAGCTTAATATAAT+TGG 0.267824 5_3:+12509888 Msa0799330:CDS
CAACTAGTATTGTTGCTTCC+GGG 0.287565 5_3:+12509970 Msa0799330:CDS
TCTTCGTTATTATCCAAAAT+AGG 0.293857 5_3:-12508568 None:intergenic
GGTGATCATAAAGGACATTC+TGG 0.295328 5_3:-12511003 None:intergenic
ATAGCTCCATTATGATTAAA+TGG 0.296004 5_3:-12510560 None:intergenic
TCCTTGAATTCCATCCCTTC+TGG 0.302980 5_3:+12510722 Msa0799330:CDS
GATTTAGGTGGTGGTGATTC+GGG 0.318391 5_3:+12508136 Msa0799330:CDS
TGAGTCATATTGGCAGGATA+TGG 0.322593 5_3:+12510214 Msa0799330:CDS
GTTGGAGGGCACTTGCATTT+AGG 0.324234 5_3:-12510617 None:intergenic
AAAGGCTGTAATTGTACTAA+TGG 0.324470 5_3:+12510485 Msa0799330:CDS
TGAAGACTGTAGCTTGAAAA+AGG 0.324757 5_3:+12508378 Msa0799330:CDS
GGGCATGGAAGCTGTGGATA+TGG 0.325224 5_3:+12508477 Msa0799330:CDS
GGGAAGCCAGTGATGGTAAA+TGG 0.328236 5_3:+12507986 Msa0799330:CDS
GCAACTAGTATTGTTGCTTC+CGG 0.330626 5_3:+12509969 Msa0799330:CDS
TTAGTACAATTACAGCCTTT+TGG 0.332092 5_3:-12510482 None:intergenic
GGAACCACCTATATTGATAT+TGG 0.333643 5_3:-12508869 None:intergenic
GGAGACTTTGGATGCGGAAT+TGG 0.341628 5_3:+12508615 Msa0799330:CDS
TGAAGGAGGCTTTAACTAAA+AGG 0.341984 5_3:+12508902 Msa0799330:CDS
AAGATCATGGGATCTGTTCC+TGG 0.350847 5_3:+12509837 Msa0799330:CDS
AAAGGTGTACTAAATCATTC+TGG 0.352831 5_3:+12509453 Msa0799330:CDS
TTTGATTGAAAAGATGAATT+CGG 0.361033 5_3:+12507919 None:intergenic
AATCTATACCACCCTGAATC+TGG 0.365878 5_3:-12509920 None:intergenic
GAGATTCCATTTAATCATAA+TGG 0.367693 5_3:+12510554 Msa0799330:CDS
AACATTCTGAAGAAGAATTA+GGG 0.368058 5_3:+12507966 Msa0799330:CDS
AGATTTAGGTGGTGGTGATT+CGG 0.370179 5_3:+12508135 Msa0799330:CDS
CGGTATGGAAACTTCAGATA+TGG 0.371541 5_3:+12508741 Msa0799330:CDS
GACATTCTGGGCATAGAGAT+TGG 0.378566 5_3:-12510990 None:intergenic
TATGGTGTTCACAGCACATA+TGG 0.381418 5_3:-12510387 None:intergenic
CATGGTCTCATCTCATCAAT+TGG 0.383281 5_3:+12508540 Msa0799330:CDS
AGAATGATTTAGTACACCTT+TGG 0.384346 5_3:-12509451 None:intergenic
CCGGAAGAATGTGGACCGTT+TGG 0.384555 5_3:+12508073 Msa0799330:CDS
ACATTCTGGGCATAGAGATT+GGG 0.385745 5_3:-12510989 None:intergenic
TTTATGATCACCATGACAAC+AGG 0.387530 5_3:+12511014 Msa0799330:CDS
GATTCTTTCACATTTGACTT+TGG 0.398140 5_3:-12509747 None:intergenic
TCATTGTCCAATATCAATAT+AGG 0.398722 5_3:+12508862 Msa0799330:CDS
TTCTACAAACAGCTTGGAAC+AGG 0.402055 5_3:-12509698 None:intergenic
TCAAACTACTTTCGAGTTCT+GGG 0.404581 5_3:-12509251 None:intergenic
AAATGACGGACCTGCAGAAC+TGG 0.405443 5_3:+12508711 Msa0799330:CDS
GAAAGTAGTGCTAGGTTTGA+TGG 0.408534 5_3:+12509290 Msa0799330:CDS
TGAAGCTTCAAAAGTGGAAT+TGG 0.409850 5_3:+12508453 Msa0799330:CDS
GTTTCGCTTGCGAAGAAAGC+CGG 0.413635 5_3:+12510262 Msa0799330:CDS
TCAAATTGATGAGTCTACTT+TGG 0.415306 5_3:+12508687 Msa0799330:CDS
AAAATCAGCTTCAACAAAGT+TGG 0.420516 5_3:-12509088 None:intergenic
GCGAGGTCAAGAATTCTGTT+AGG 0.421124 5_3:+12510123 Msa0799330:CDS
TGTGGTTCTGTGGAATGTAC+TGG 0.421622 5_3:+12511163 Msa0799330:CDS
GCCAATCTCATCTCAGTAGA+TGG 0.421747 5_3:-12509147 None:intergenic
CACCCTGAATCTGGCGATGA+AGG 0.425090 5_3:-12509911 None:intergenic
TGTTGTCATGGTGATCATAA+AGG 0.429329 5_3:-12511012 None:intergenic
TCTATGAAGTTGAGTCATAT+TGG 0.437887 5_3:+12510204 Msa0799330:CDS
GACATAGCTACCTCGCCAAC+TGG 0.438153 5_3:-12508823 None:intergenic
ATTGGTGGGCATGGAGACTT+TGG 0.440213 5_3:+12508603 Msa0799330:CDS
TGCAATATTGTCCCTCCAAA+AGG 0.442817 5_3:+12510467 Msa0799330:CDS
GAGTCATATTGGCAGGATAT+GGG 0.443386 5_3:+12510215 Msa0799330:CDS
AGAAGATCAGAAGCTTGAAC+GGG 0.449548 5_3:+12510076 Msa0799330:CDS
GGAAGCTGTGGATATGGAAT+TGG 0.449691 5_3:+12508483 Msa0799330:CDS
GGCCAAGTCAGAATGTCCTT+GGG 0.450886 5_3:+12509311 Msa0799330:CDS
TCATCACAAACCGACATTGA+TGG 0.458444 5_3:-12507944 None:intergenic
CGGGTCAACCAGAGCTTGCT+TGG 0.460037 5_3:+12510282 Msa0799330:CDS
TCTGTTCCTGGGGTTGAAGT+TGG 0.460888 5_3:+12509849 Msa0799330:CDS
TAAAACCAAGTCAATGGGAT+GGG 0.462217 5_3:+12510691 Msa0799330:CDS
TGGCCAAGTCAGAATGTCCT+TGG 0.468262 5_3:+12509310 Msa0799330:CDS
GGAAAACATGAACATCGTTA+AGG 0.468416 5_3:+12509197 Msa0799330:CDS
AGTACCTTCCAAGCAAGCTC+TGG 0.469016 5_3:-12510290 None:intergenic
TCCAGAAGGGATGGAATTCA+AGG 0.469469 5_3:-12510723 None:intergenic
TATAATAGAGTCAGCCAACT+TGG 0.470293 5_3:+12510644 Msa0799330:CDS
GAGTCTCCATTTACCATCAC+TGG 0.471142 5_3:-12507992 None:intergenic
GGCCTTCATCGCCAGATTCA+GGG 0.471401 5_3:+12509909 Msa0799330:CDS
ACTATCGATGCCGCTCAGTT+CGG 0.474989 5_3:+12510932 Msa0799330:CDS
GGGACAATATTGCAACAATC+AGG 0.476635 5_3:-12510458 None:intergenic
GAATTCTGTTAGGGTGATAC+GGG 0.481274 5_3:+12510133 Msa0799330:CDS
GGCACTGGATAATCATCATC+AGG 0.481375 5_3:+12509167 Msa0799330:CDS
CAGAAGATCAGAAGCTTGAA+CGG 0.482485 5_3:+12510075 Msa0799330:CDS
TATGGGGCCACATGGGAAGC+TGG 0.483438 5_3:+12510232 Msa0799330:CDS
ACACTCATCCTGGCTGAGAC+GGG 0.486717 5_3:-12508989 None:intergenic
AGAATTCTGTTAGGGTGATA+CGG 0.488400 5_3:+12510132 Msa0799330:CDS
AGAACTCGAAAGTAGTTTGA+AGG 0.490279 5_3:+12509254 Msa0799330:CDS
ATTTAGTACACCTTTGGACT+TGG 0.490483 5_3:-12509445 None:intergenic
GTCTCATCTCATCAAGTGGA+TGG 0.491155 5_3:+12508412 Msa0799330:CDS
GTTGAATATTTATGCCAAGT+TGG 0.491644 5_3:-12510658 None:intergenic
CCAAACGGTCCACATTCTTC+CGG 0.491712 5_3:-12508073 None:intergenic
GATATGGAATTTACAACAGA+AGG 0.491786 5_3:+12508757 Msa0799330:CDS
CCGACCAATGCCAGTTCTGC+AGG 0.494283 5_3:-12508721 None:intergenic
AACTAGTATTGTTGCTTCCG+GGG 0.494402 5_3:+12509971 Msa0799330:CDS
AGGGAATGCGGTCAAGAAGC+TGG 0.495760 5_3:+12509113 Msa0799330:CDS
GTTATGTATTTAAATGGAGG+GGG 0.500203 5_3:-12510422 None:intergenic
CTTGGTCGTAGTAATTTAAG+TGG 0.500245 5_3:+12509627 Msa0799330:CDS
TAATGAAGGGGAGAAGATCA+TGG 0.501403 5_3:+12509824 Msa0799330:CDS
ATCTTATATATCAGAGGCAT+CGG 0.501515 5_3:+12508798 Msa0799330:CDS
TACTGAGATGAGATTGGCAC+TGG 0.503247 5_3:+12509152 Msa0799330:CDS
TGGCAGGATATGGGGCCACA+TGG 0.503771 5_3:+12510224 Msa0799330:CDS
CTGACTCTATTATAACAAGT+TGG 0.504283 5_3:-12510635 None:intergenic
CAACGATGAACCTGCAAAAG+TGG 0.504681 5_3:+12508315 Msa0799330:CDS
AAAGGGAGCTATGTTAATGA+AGG 0.505411 5_3:+12509810 Msa0799330:CDS
CGCGTTGAAGATATTTCCTA+CGG 0.505475 5_3:+12510350 Msa0799330:CDS
AAAACTGACATTGGTGGGCA+TGG 0.507583 5_3:+12508594 Msa0799330:CDS
TTTCGCTTGCGAAGAAAGCC+GGG 0.508175 5_3:+12510263 Msa0799330:CDS
GCCGCTCAGTTCGGTAATGT+AGG 0.508262 5_3:+12510941 Msa0799330:CDS
TAATCATCATCAGGTTAAAG+TGG 0.509315 5_3:+12509176 Msa0799330:CDS
TGTACTGGTAGGTTGTATTG+AGG 0.511536 5_3:+12511178 Msa0799330:CDS
AAGGTGTACTAAATCATTCT+GGG 0.513245 5_3:+12509454 Msa0799330:CDS
AAATTTAAACCAACATCCAT+TGG 0.513515 5_3:+12509354 Msa0799330:CDS
TGATAGTCCCAACGACGAAA+AGG 0.515728 5_3:+12508165 Msa0799330:CDS
ATTGGTGGGCGTAGAAGCTA+TGG 0.516134 5_3:+12508339 Msa0799330:CDS
ACCATCTACTGAGATGAGAT+TGG 0.516227 5_3:+12509146 Msa0799330:CDS
TTGAGTGCGAATCTGGCAAA+AGG 0.518542 5_3:-12510877 None:intergenic
AATATCAATATAGGTGGTTC+CGG 0.518966 5_3:+12508871 Msa0799330:CDS
GTGATCATAAAGGACATTCT+GGG 0.521375 5_3:-12511002 None:intergenic
CTTATCTGATCAAGTGGATG+TGG 0.522415 5_3:+12508282 Msa0799330:CDS
TACACCCCATCCCATTGACT+TGG 0.523806 5_3:-12510696 None:intergenic
TGAAGACTGTAGCTTGAGAA+AGG 0.523979 5_3:+12508510 Msa0799330:CDS
CGAGGTCAAGAATTCTGTTA+GGG 0.527113 5_3:+12510124 Msa0799330:CDS
TGAAGTTGAGTCATATTGGC+AGG 0.528849 5_3:+12510208 Msa0799330:CDS
CAATGCTCCCCGTCTCAGCC+AGG 0.529270 5_3:+12508981 Msa0799330:CDS
AAGGAAGCTGAACAAAGAAC+TGG 0.530093 5_3:+12510785 Msa0799330:CDS
ACTTTCCGACGCTTAAACCT+AGG 0.530593 5_3:-12508031 None:intergenic
AGCTTCAAAAGTGGAATTGG+TGG 0.531376 5_3:+12508456 Msa0799330:CDS
AGATCATGGGATCTGTTCCT+GGG 0.531698 5_3:+12509838 Msa0799330:CDS
ATCGTAAGTCAGCTCTTGCA+AGG 0.532130 5_3:-12511077 None:intergenic
TCAACCAGAGCTTGCTTGGA+AGG 0.533430 5_3:+12510286 Msa0799330:CDS
TAGTTATGTATTTAAATGGA+GGG 0.533607 5_3:-12510424 None:intergenic
ACTCTATTATAACAAGTTGG+AGG 0.533970 5_3:-12510632 None:intergenic
CCTAGCACTACTTTCCTGCC+TGG 0.535459 5_3:-12509282 None:intergenic
GCTCCTTTAGACACTCATCC+TGG 0.536997 5_3:-12508999 None:intergenic
AAAAGTGGAATTGGTGGGCA+TGG 0.537948 5_3:+12508462 Msa0799330:CDS
CATTCTGGGCATAGAGATTG+GGG 0.538907 5_3:-12510988 None:intergenic
TGAACCTGCAAAAGTGGTAT+TGG 0.538930 5_3:+12508321 Msa0799330:CDS
TAACGATGAAGCTTCAAAAG+TGG 0.544439 5_3:+12508447 Msa0799330:CDS
GATACAAAACTGACATTGGT+GGG 0.544785 5_3:+12508589 Msa0799330:CDS
AAAGCTTTCTACAAACAGCT+TGG 0.545465 5_3:-12509704 None:intergenic
TGGATGTTGGTTTAAATTTG+GGG 0.545850 5_3:-12509350 None:intergenic
CTCATCTCATCAAGTGGATG+GGG 0.546998 5_3:+12508414 Msa0799330:CDS
AGTTATGTATTTAAATGGAG+GGG 0.547903 5_3:-12510423 None:intergenic
GATAAAACTTCCAGAAGGGA+TGG 0.548978 5_3:-12510732 None:intergenic
TTAGTTATGTATTTAAATGG+AGG 0.549426 5_3:-12510425 None:intergenic
CAACTATTGTTGATCCGCCT+AGG 0.552035 5_3:+12508014 Msa0799330:CDS
TTAAAACCAAGTCAATGGGA+TGG 0.552622 5_3:+12510690 Msa0799330:CDS
CGAAGATACAAAACTGACAT+TGG 0.553321 5_3:+12508585 Msa0799330:CDS
TGCTGACGGTACGAGTGTTG+AGG 0.553577 5_3:+12508099 Msa0799330:CDS
TCTCATCTCATCAAGTGGAT+GGG 0.553872 5_3:+12508413 Msa0799330:CDS
AGCCTCCTTCATACAAGCAC+CGG 0.554334 5_3:-12508890 None:intergenic
GTTTGAAGGTCTCACCAGGC+AGG 0.555243 5_3:+12509268 Msa0799330:CDS
TTTAAACCAACATCCATTGG+TGG 0.555528 5_3:+12509357 Msa0799330:CDS
TGGTTCCGGTGCTTGTATGA+AGG 0.555754 5_3:+12508885 Msa0799330:CDS
CATGAACATCGTTAAGGTCG+AGG 0.556379 5_3:+12509203 Msa0799330:CDS
CCGCTCAGTTCGGTAATGTA+GGG 0.558292 5_3:+12510942 Msa0799330:CDS
AACAACAGTAATCTTTGGGA+TGG 0.558592 5_3:+12510845 Msa0799330:CDS
GGACCGTTTGGTTCTGCTGA+CGG 0.559849 5_3:+12508085 Msa0799330:CDS
TCTGTACCACCAATGGATGT+TGG 0.560078 5_3:-12509363 None:intergenic
TATATTGATATTGGACAATG+AGG 0.560906 5_3:-12508860 None:intergenic
CAGCCAGGATGAGTGTCTAA+AGG 0.561581 5_3:+12508996 Msa0799330:CDS
AGAACTGGCATTGGTCGGTA+TGG 0.564148 5_3:+12508726 Msa0799330:CDS
AAATTCTAGTTCTGATGACA+TGG 0.567262 5_3:+12509503 Msa0799330:CDS
ATGAGAGTGACTCAGTGGCC+CGG 0.569197 5_3:+12509652 Msa0799330:CDS
CAAGCAAGCTCTGGTTGACC+CGG 0.569213 5_3:-12510281 None:intergenic
CCTGTCATCTGTACCACCAA+TGG 0.569944 5_3:-12509370 None:intergenic
GACACTCATCCTGGCTGAGA+CGG 0.572210 5_3:-12508990 None:intergenic
CCATTGGTGGTACAGATGAC+AGG 0.575959 5_3:+12509370 Msa0799330:CDS
AAAACCAAGTCAATGGGATG+GGG 0.578324 5_3:+12510692 Msa0799330:CDS
AAGGGAGCTATGTTAATGAA+GGG 0.578536 5_3:+12509811 Msa0799330:CDS
ACTAGTATTGTTGCTTCCGG+GGG 0.578670 5_3:+12509972 Msa0799330:CDS
AAGCCTCTAGTCTATGAGTG+TGG 0.578730 5_3:+12510593 Msa0799330:CDS
AAGTGGCTGTAGTTTGAAGA+AGG 0.580199 5_3:+12508246 Msa0799330:CDS
TGGAGAGGTTCTTGAGGACA+AGG 0.580571 5_3:+12510766 Msa0799330:CDS
ATTGGTGGGCATGGAAGCTG+TGG 0.583994 5_3:+12508471 Msa0799330:CDS
GGGCATGGAGACTTTGGATG+CGG 0.586754 5_3:+12508609 Msa0799330:CDS
TGTGGTCTCATCTCATCAAG+TGG 0.587074 5_3:+12508408 Msa0799330:CDS
CGGACCTGCAGAACTGGCAT+TGG 0.588611 5_3:+12508717 Msa0799330:CDS
CACAGATAAAACTTCCAGAA+GGG 0.588807 5_3:-12510736 None:intergenic
GGCAGGATATGGGGCCACAT+GGG 0.589278 5_3:+12510225 Msa0799330:CDS
AGATACAAAACTGACATTGG+TGG 0.589399 5_3:+12508588 Msa0799330:CDS
ATGGTGTTCACAGCACATAT+GGG 0.589870 5_3:-12510386 None:intergenic
AGCCTCTAGTCTATGAGTGT+GGG 0.592603 5_3:+12510594 Msa0799330:CDS
TCACAGATAAAACTTCCAGA+AGG 0.593451 5_3:-12510737 None:intergenic
TCCCCAAGGACATTCTGACT+TGG 0.593577 5_3:-12509313 None:intergenic
GAGTCTACTTTGGCAAATGA+CGG 0.594825 5_3:+12508697 Msa0799330:CDS
TAAGTCAGCTCTTGCAAGGG+AGG 0.595124 5_3:-12511073 None:intergenic
ACCTGCAAAAGTGGTATTGG+TGG 0.595437 5_3:+12508324 Msa0799330:CDS
CAATTGATGAGATGAGACCA+TGG 0.596287 5_3:-12508539 None:intergenic
CATGAGGAACCCTGTTGTCA+TGG 0.598124 5_3:-12511024 None:intergenic
AAGCAACAATACTAGTTGCA+AGG 0.598665 5_3:-12509965 None:intergenic
AGTAGTTTGAAGGTCTCACC+AGG 0.598759 5_3:+12509264 Msa0799330:CDS
AGATTTATCTTATATATCAG+AGG 0.600987 5_3:+12508792 Msa0799330:CDS
GGATGTTGGTTTAAATTTGG+GGG 0.601362 5_3:-12509349 None:intergenic
AGTCATATTGGCAGGATATG+GGG 0.602342 5_3:+12510216 Msa0799330:CDS
CCAGGCAGGAAAGTAGTGCT+AGG 0.602466 5_3:+12509282 Msa0799330:CDS
CTCTATTATAACAAGTTGGA+GGG 0.603275 5_3:-12510631 None:intergenic
AATGAAGGGGAGAAGATCAT+GGG 0.604075 5_3:+12509825 Msa0799330:CDS
TCATCACCAACTTCAACCCC+AGG 0.604148 5_3:-12509855 None:intergenic
TTATGTATTTAAATGGAGGG+GGG 0.605614 5_3:-12510421 None:intergenic
AGTGGTGAAGATTTAGGTGG+TGG 0.605730 5_3:+12508127 Msa0799330:CDS
AGGGAGCTATGTTAATGAAG+GGG 0.606446 5_3:+12509812 Msa0799330:CDS
TTCCGGTGCTTGTATGAAGG+AGG 0.609421 5_3:+12508888 Msa0799330:CDS
CGGGGATCTGAATCAGCGGA+TGG 0.611571 5_3:+12510152 Msa0799330:CDS
TGTGGTCTTATCTGATCAAG+TGG 0.612824 5_3:+12508276 Msa0799330:CDS
TATCTGTGAATATATTGGAG+AGG 0.613185 5_3:+12510751 Msa0799330:CDS
GCTTCAAAAGTGGAATTGGT+GGG 0.613307 5_3:+12508457 Msa0799330:CDS
TGGTGGTACAGATGACAGGA+AGG 0.614455 5_3:+12509374 Msa0799330:CDS
TCAGAGGCATCGGCTCCAGT+TGG 0.614475 5_3:+12508808 Msa0799330:CDS
AGAATTAGGGAAGCCAGTGA+TGG 0.615410 5_3:+12507979 Msa0799330:CDS
AATTGATGAGATGAGACCAT+GGG 0.617974 5_3:-12508538 None:intergenic
AGTGAAGTAGTGAATGATGT+TGG 0.618250 5_3:+12510905 Msa0799330:CDS
ATCCGCCTAGGTTTAAGCGT+CGG 0.618613 5_3:+12508026 Msa0799330:CDS
AGCAAGATATATGTTTACGA+TGG 0.618907 5_3:+12510179 Msa0799330:CDS
CTTGAGAAAGGAAGATCCCA+TGG 0.621289 5_3:+12508522 Msa0799330:CDS
ATGAACATCGTTAAGGTCGA+GGG 0.623227 5_3:+12509204 Msa0799330:CDS
GAATTCGGAGCCATCAATGT+CGG 0.623601 5_3:+12507934 Msa0799330:CDS
CACTCATCCTGGCTGAGACG+GGG 0.624068 5_3:-12508988 None:intergenic
TTATCTGATCAAGTGGATGT+GGG 0.624073 5_3:+12508283 Msa0799330:CDS
GCGTTGAAGATATTTCCTAC+GGG 0.625923 5_3:+12510351 Msa0799330:CDS
GGCCCACACTCATAGACTAG+AGG 0.626323 5_3:-12510596 None:intergenic
CAAATGTGAAAGAATCAAAG+AGG 0.632909 5_3:+12509754 Msa0799330:CDS
TTGTCCAATATCAATATAGG+TGG 0.635936 5_3:+12508865 Msa0799330:CDS
TGCTTTGAAGAATAGTAGCG+AGG 0.636465 5_3:+12510106 Msa0799330:CDS
GTACCGTCAGCAGAACCAAA+CGG 0.636826 5_3:-12508088 None:intergenic
CCTGCAGAACTGGCATTGGT+CGG 0.637297 5_3:+12508721 Msa0799330:CDS
TAAGTCATCAGCATAGCCCC+CGG 0.637423 5_3:-12509988 None:intergenic
GGCATCGGCTCCAGTTGGCG+AGG 0.639691 5_3:+12508813 Msa0799330:CDS
ACTTGATCAGATAAGACCAC+AGG 0.642209 5_3:-12508274 None:intergenic
ACTTGATGAGATGAGACCAC+AGG 0.643420 5_3:-12508406 None:intergenic
AAAACTGCGACCAAGTCCAA+AGG 0.643866 5_3:+12509435 Msa0799330:CDS
CATGGGTCAATTAGTAACAC+GGG 0.644532 5_3:+12509521 Msa0799330:CDS
TTTGAAGAAGGAGGATCCTG+TGG 0.645117 5_3:+12508258 Msa0799330:CDS
TCGTAAGTCAGCTCTTGCAA+GGG 0.649908 5_3:-12511076 None:intergenic
AAATGTGAAAGAATCAAAGA+GGG 0.651541 5_3:+12509755 Msa0799330:CDS
GATCAAGTTCGTGATTCCGA+TGG 0.655471 5_3:+12511115 Msa0799330:CDS
ATATATTGGAGAGGTTCTTG+AGG 0.657084 5_3:+12510760 Msa0799330:CDS
ACGAGTGTTGAGGTTAAGAG+TGG 0.661350 5_3:+12508109 Msa0799330:CDS
GACACTGTTGAACAAACAAG+TGG 0.662787 5_3:+12508229 Msa0799330:CDS
GATCATGGGATCTGTTCCTG+GGG 0.665855 5_3:+12509839 Msa0799330:CDS
GCCAAGTCAGAATGTCCTTG+GGG 0.668770 5_3:+12509312 Msa0799330:CDS
ACATGGGTCAATTAGTAACA+CGG 0.669242 5_3:+12509520 Msa0799330:CDS
AAGAGTGGTGAAGATTTAGG+TGG 0.670342 5_3:+12508124 Msa0799330:CDS
CTTAAATTACTACGACCAAG+AGG 0.670569 5_3:-12509624 None:intergenic
CAGTGGCCCGGAATAAAGTG+AGG 0.675048 5_3:+12509664 Msa0799330:CDS
GTTCTGTGGAATGTACTGGT+AGG 0.675695 5_3:+12511167 Msa0799330:CDS
AATTCTAGTTCTGATGACAT+GGG 0.681067 5_3:+12509504 Msa0799330:CDS
GGTGGTACAGATGACAGGAA+GGG 0.684498 5_3:+12509375 Msa0799330:CDS
GCAGCAAATAACATGACATG+AGG 0.684985 5_3:-12511040 None:intergenic
TTGATATATACAGGGCAGGG+TGG 0.688777 5_3:+12510026 Msa0799330:CDS
TTATGATCACCATGACAACA+GGG 0.689712 5_3:+12511015 Msa0799330:CDS
TGGCTGTAGTTTGAAGAAGG+AGG 0.691363 5_3:+12508249 Msa0799330:CDS
GATACGGGGATCTGAATCAG+CGG 0.692287 5_3:+12510148 Msa0799330:CDS
TTCCGACGCTTAAACCTAGG+CGG 0.695004 5_3:-12508028 None:intergenic
CCTGCAAAAGTGGTATTGGT+GGG 0.696602 5_3:+12508325 Msa0799330:CDS
TGGTCATGAGAGTGACTCAG+TGG 0.696808 5_3:+12509647 Msa0799330:CDS
GAAGATCAGAAGCTTGAACG+GGG 0.698030 5_3:+12510077 Msa0799330:CDS
AAAAGTGTCCCAAAACCACG+TGG 0.710733 5_3:+12509585 Msa0799330:CDS
CCCTACATTACCGAACTGAG+CGG 0.715373 5_3:-12510942 None:intergenic
GCATTGCGTCCACATAAACG+TGG 0.716479 5_3:-12508964 None:intergenic
TTATAAACCAGCTTCCCATG+TGG 0.718258 5_3:-12510239 None:intergenic
GAACAAATATCAGATCCCCA+AGG 0.723725 5_3:-12509327 None:intergenic
GTACACAAGAACATTTCTCG+TGG 0.725371 5_3:-12510517 None:intergenic
CTTCATCGCCAGATTCAGGG+TGG 0.729437 5_3:+12509912 Msa0799330:CDS
AAAACATTTACATAACCACG+TGG 0.753070 5_3:-12509600 None:intergenic
AATTCTGTTAGGGTGATACG+GGG 0.761052 5_3:+12510134 Msa0799330:CDS
ATTCTGGGCATAGAGATTGG+GGG 0.768685 5_3:-12510987 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAGATAAATCTTGTTTTA+CGG - chr5_3:12508785-12508804 None:intergenic 15.0%
!! ATCTTAGTTATGTATTTAAA+TGG - chr5_3:12510431-12510450 None:intergenic 15.0%
!! AGATTTATCTTATATATCAG+AGG + chr5_3:12508792-12508811 Msa0799330:CDS 20.0%
!!! TTTTCTCTTTTCTTTTTCAA+CGG - chr5_3:12509486-12509505 None:intergenic 20.0%
!!! AAGTGTTTGTTATTTTCATT+AGG - chr5_3:12509564-12509583 None:intergenic 20.0%
!! TCAAAAATACTTAAGGAAAA+AGG + chr5_3:12509792-12509811 Msa0799330:CDS 20.0%
!! CAAAAATACTTAAGGAAAAA+GGG + chr5_3:12509793-12509812 Msa0799330:CDS 20.0%
!! AGAATAGAGCTTAATATAAT+TGG + chr5_3:12509888-12509907 Msa0799330:CDS 20.0%
!! TTATATGAAGCAAAAAAACA+AGG + chr5_3:12509941-12509960 Msa0799330:CDS 20.0%
!! AAAAAGTTCAAAAAAAGAGA+AGG + chr5_3:12510323-12510342 Msa0799330:CDS 20.0%
!! TAGTTATGTATTTAAATGGA+GGG - chr5_3:12510427-12510446 None:intergenic 20.0%
!! TTAGTTATGTATTTAAATGG+AGG - chr5_3:12510428-12510447 None:intergenic 20.0%
!!! AATTTTTAAAACCAAGTCAA+TGG + chr5_3:12510685-12510704 Msa0799330:CDS 20.0%
!!! ATTTTTAAAACCAAGTCAAT+GGG + chr5_3:12510686-12510705 Msa0799330:CDS 20.0%
!!! AGTTTTATCTGTGAATATAT+TGG + chr5_3:12510746-12510765 Msa0799330:CDS 20.0%
!! AACATTCTGAAGAAGAATTA+GGG + chr5_3:12507966-12507985 Msa0799330:CDS 25.0%
!! TCATTGAACTCAAAATTTTG+AGG - chr5_3:12508193-12508212 None:intergenic 25.0%
! TCTTCGTTATTATCCAAAAT+AGG - chr5_3:12508571-12508590 None:intergenic 25.0%
! TATATTGATATTGGACAATG+AGG - chr5_3:12508863-12508882 None:intergenic 25.0%
! TCATTGTCCAATATCAATAT+AGG + chr5_3:12508862-12508881 Msa0799330:CDS 25.0%
!!! ATGGATGTTGGTTTAAATTT+GGG - chr5_3:12509354-12509373 None:intergenic 25.0%
!!! AATGGATGTTGGTTTAAATT+TGG - chr5_3:12509355-12509374 None:intergenic 25.0%
! AAATTTAAACCAACATCCAT+TGG + chr5_3:12509354-12509373 Msa0799330:CDS 25.0%
!! TATGTAAATGTTTTTCCTCT+TGG + chr5_3:12509609-12509628 Msa0799330:CDS 25.0%
! AAATGTGAAAGAATCAAAGA+GGG + chr5_3:12509755-12509774 Msa0799330:CDS 25.0%
! ACAAGCTTCAAAAATACTTA+AGG + chr5_3:12509785-12509804 Msa0799330:CDS 25.0%
!!! CAGATGTTTTGATATATACA+GGG + chr5_3:12510018-12510037 Msa0799330:CDS 25.0%
! AGTTATGTATTTAAATGGAG+GGG - chr5_3:12510426-12510445 None:intergenic 25.0%
! GAGATTCCATTTAATCATAA+TGG + chr5_3:12510554-12510573 Msa0799330:CDS 25.0%
! ATAGCTCCATTATGATTAAA+TGG - chr5_3:12510563-12510582 None:intergenic 25.0%
!! GATGAGTATCTTTTTGATAT+TGG + chr5_3:12510812-12510831 Msa0799330:CDS 25.0%
! ACAAAAACAACAGTAATCTT+TGG + chr5_3:12510840-12510859 Msa0799330:CDS 25.0%
! CAAAAACAACAGTAATCTTT+GGG + chr5_3:12510841-12510860 Msa0799330:CDS 25.0%
!! TTTCTTTTTGATATTGCCAT+CGG - chr5_3:12511134-12511153 None:intergenic 25.0%
!!! AAAAAGAAATACTGCTTTTG+TGG + chr5_3:12511145-12511164 Msa0799330:CDS 25.0%
! GAACATTCTGAAGAAGAATT+AGG + chr5_3:12507965-12507984 Msa0799330:CDS 30.0%
TCAAATTGATGAGTCTACTT+TGG + chr5_3:12508687-12508706 Msa0799330:CDS 30.0%
GATATGGAATTTACAACAGA+AGG + chr5_3:12508757-12508776 Msa0799330:CDS 30.0%
! ATCTTATATATCAGAGGCAT+CGG + chr5_3:12508798-12508817 Msa0799330:CDS 30.0%
TTGTCCAATATCAATATAGG+TGG + chr5_3:12508865-12508884 Msa0799330:CDS 30.0%
AATATCAATATAGGTGGTTC+CGG + chr5_3:12508871-12508890 Msa0799330:CDS 30.0%
!!! TGTTATTTTCTGCTTCTTGT+AGG - chr5_3:12509056-12509075 None:intergenic 30.0%
AAAATCAGCTTCAACAAAGT+TGG - chr5_3:12509091-12509110 None:intergenic 30.0%
!! TTTGTTGAAGCTGATTTTGA+AGG + chr5_3:12509093-12509112 Msa0799330:CDS 30.0%
!! TTGTTGAAGCTGATTTTGAA+GGG + chr5_3:12509094-12509113 Msa0799330:CDS 30.0%
TAATCATCATCAGGTTAAAG+TGG + chr5_3:12509176-12509195 Msa0799330:CDS 30.0%
!! TGGATGTTGGTTTAAATTTG+GGG - chr5_3:12509353-12509372 None:intergenic 30.0%
AGAATGATTTAGTACACCTT+TGG - chr5_3:12509454-12509473 None:intergenic 30.0%
! AAAGGTGTACTAAATCATTC+TGG + chr5_3:12509453-12509472 Msa0799330:CDS 30.0%
AAGGTGTACTAAATCATTCT+GGG + chr5_3:12509454-12509473 Msa0799330:CDS 30.0%
!! AAATTCTAGTTCTGATGACA+TGG + chr5_3:12509503-12509522 Msa0799330:CDS 30.0%
!! AATTCTAGTTCTGATGACAT+GGG + chr5_3:12509504-12509523 Msa0799330:CDS 30.0%
AAAACATTTACATAACCACG+TGG - chr5_3:12509603-12509622 None:intergenic 30.0%
! ATGTTTTCCTCACTTTATTC+CGG - chr5_3:12509674-12509693 None:intergenic 30.0%
! GATTCTTTCACATTTGACTT+TGG - chr5_3:12509750-12509769 None:intergenic 30.0%
CAAATGTGAAAGAATCAAAG+AGG + chr5_3:12509754-12509773 Msa0799330:CDS 30.0%
!!! GCAGATGTTTTGATATATAC+AGG + chr5_3:12510017-12510036 Msa0799330:CDS 30.0%
AGCAAGATATATGTTTACGA+TGG + chr5_3:12510179-12510198 Msa0799330:CDS 30.0%
TCTATGAAGTTGAGTCATAT+TGG + chr5_3:12510204-12510223 Msa0799330:CDS 30.0%
TTATGTATTTAAATGGAGGG+GGG - chr5_3:12510424-12510443 None:intergenic 30.0%
GTTATGTATTTAAATGGAGG+GGG - chr5_3:12510425-12510444 None:intergenic 30.0%
! TTAGTACAATTACAGCCTTT+TGG - chr5_3:12510485-12510504 None:intergenic 30.0%
AAAGGCTGTAATTGTACTAA+TGG + chr5_3:12510485-12510504 Msa0799330:CDS 30.0%
TGTTCTTGTGTACTCAAAAA+TGG + chr5_3:12510527-12510546 Msa0799330:CDS 30.0%
GTTCTTGTGTACTCAAAAAT+GGG + chr5_3:12510528-12510547 Msa0799330:CDS 30.0%
TTCTTGTGTACTCAAAAATG+GGG + chr5_3:12510529-12510548 Msa0799330:CDS 30.0%
! CTCTATTATAACAAGTTGGA+GGG - chr5_3:12510634-12510653 None:intergenic 30.0%
! ACTCTATTATAACAAGTTGG+AGG - chr5_3:12510635-12510654 None:intergenic 30.0%
CTGACTCTATTATAACAAGT+TGG - chr5_3:12510638-12510657 None:intergenic 30.0%
GTTGAATATTTATGCCAAGT+TGG - chr5_3:12510661-12510680 None:intergenic 30.0%
TATCTGTGAATATATTGGAG+AGG + chr5_3:12510751-12510770 Msa0799330:CDS 30.0%
GTTAAGAGTGGTGAAGATTT+AGG + chr5_3:12508121-12508140 Msa0799330:CDS 35.0%
TTATCTGATCAAGTGGATGT+GGG + chr5_3:12508283-12508302 Msa0799330:CDS 35.0%
TGAAGACTGTAGCTTGAAAA+AGG + chr5_3:12508378-12508397 Msa0799330:CDS 35.0%
TAACGATGAAGCTTCAAAAG+TGG + chr5_3:12508447-12508466 Msa0799330:CDS 35.0%
TGAAGCTTCAAAAGTGGAAT+TGG + chr5_3:12508453-12508472 Msa0799330:CDS 35.0%
AATTGATGAGATGAGACCAT+GGG - chr5_3:12508541-12508560 None:intergenic 35.0%
! TCAATTGGATGTGCCTATTT+TGG + chr5_3:12508555-12508574 Msa0799330:CDS 35.0%
CGAAGATACAAAACTGACAT+TGG + chr5_3:12508585-12508604 Msa0799330:CDS 35.0%
AGATACAAAACTGACATTGG+TGG + chr5_3:12508588-12508607 Msa0799330:CDS 35.0%
GATACAAAACTGACATTGGT+GGG + chr5_3:12508589-12508608 Msa0799330:CDS 35.0%
GGAACCACCTATATTGATAT+TGG - chr5_3:12508872-12508891 None:intergenic 35.0%
! TGAAGGAGGCTTTAACTAAA+AGG + chr5_3:12508902-12508921 Msa0799330:CDS 35.0%
! AGAGATTTTCCACGTTTATG+TGG + chr5_3:12508955-12508974 Msa0799330:CDS 35.0%
GGAAAACATGAACATCGTTA+AGG + chr5_3:12509197-12509216 Msa0799330:CDS 35.0%
!! TCAAACTACTTTCGAGTTCT+GGG - chr5_3:12509254-12509273 None:intergenic 35.0%
!! TTCAAACTACTTTCGAGTTC+TGG - chr5_3:12509255-12509274 None:intergenic 35.0%
AGAACTCGAAAGTAGTTTGA+AGG + chr5_3:12509254-12509273 Msa0799330:CDS 35.0%
!! GGATGTTGGTTTAAATTTGG+GGG - chr5_3:12509352-12509371 None:intergenic 35.0%
TTTAAACCAACATCCATTGG+TGG + chr5_3:12509357-12509376 Msa0799330:CDS 35.0%
ATTTAGTACACCTTTGGACT+TGG - chr5_3:12509448-12509467 None:intergenic 35.0%
ACATGGGTCAATTAGTAACA+CGG + chr5_3:12509520-12509539 Msa0799330:CDS 35.0%
! TTACATAACCACGTGGTTTT+GGG - chr5_3:12509596-12509615 None:intergenic 35.0%
! TTTACATAACCACGTGGTTT+TGG - chr5_3:12509597-12509616 None:intergenic 35.0%
CTTAAATTACTACGACCAAG+AGG - chr5_3:12509627-12509646 None:intergenic 35.0%
CTTGGTCGTAGTAATTTAAG+TGG + chr5_3:12509627-12509646 Msa0799330:CDS 35.0%
! TGTTTTCCTCACTTTATTCC+GGG - chr5_3:12509673-12509692 None:intergenic 35.0%
AAAGCTTTCTACAAACAGCT+TGG - chr5_3:12509707-12509726 None:intergenic 35.0%
! TGTTTGTAGAAAGCTTTTGC+AGG + chr5_3:12509710-12509729 Msa0799330:CDS 35.0%
AAAGGGAGCTATGTTAATGA+AGG + chr5_3:12509810-12509829 Msa0799330:CDS 35.0%
AAGGGAGCTATGTTAATGAA+GGG + chr5_3:12509811-12509830 Msa0799330:CDS 35.0%
AAGCAACAATACTAGTTGCA+AGG - chr5_3:12509968-12509987 None:intergenic 35.0%
!!! TGTTTTGATATATACAGGGC+AGG + chr5_3:12510022-12510041 Msa0799330:CDS 35.0%
!! GTTTTGATATATACAGGGCA+GGG + chr5_3:12510023-12510042 Msa0799330:CDS 35.0%
AGAATTCTGTTAGGGTGATA+CGG + chr5_3:12510132-12510151 Msa0799330:CDS 35.0%
! TACAATTACAGCCTTTTGGA+GGG - chr5_3:12510481-12510500 None:intergenic 35.0%
TCTTGTGTACTCAAAAATGG+GGG + chr5_3:12510530-12510549 Msa0799330:CDS 35.0%
TATAATAGAGTCAGCCAACT+TGG + chr5_3:12510644-12510663 Msa0799330:CDS 35.0%
TTAAAACCAAGTCAATGGGA+TGG + chr5_3:12510690-12510709 Msa0799330:CDS 35.0%
TAAAACCAAGTCAATGGGAT+GGG + chr5_3:12510691-12510710 Msa0799330:CDS 35.0%
CACAGATAAAACTTCCAGAA+GGG - chr5_3:12510739-12510758 None:intergenic 35.0%
TCACAGATAAAACTTCCAGA+AGG - chr5_3:12510740-12510759 None:intergenic 35.0%
ATATATTGGAGAGGTTCTTG+AGG + chr5_3:12510760-12510779 Msa0799330:CDS 35.0%
! AACAACAGTAATCTTTGGGA+TGG + chr5_3:12510845-12510864 Msa0799330:CDS 35.0%
AGTGAAGTAGTGAATGATGT+TGG + chr5_3:12510905-12510924 Msa0799330:CDS 35.0%
GTGATCATAAAGGACATTCT+GGG - chr5_3:12511005-12511024 None:intergenic 35.0%
TGTTGTCATGGTGATCATAA+AGG - chr5_3:12511015-12511034 None:intergenic 35.0%
TTTATGATCACCATGACAAC+AGG + chr5_3:12511014-12511033 Msa0799330:CDS 35.0%
TTATGATCACCATGACAACA+GGG + chr5_3:12511015-12511034 Msa0799330:CDS 35.0%
TCATCACAAACCGACATTGA+TGG - chr5_3:12507947-12507966 None:intergenic 40.0%
! TTCTGCTGTTCGTGATTTTC+CGG + chr5_3:12508054-12508073 Msa0799330:CDS 40.0%
AAGAGTGGTGAAGATTTAGG+TGG + chr5_3:12508124-12508143 Msa0799330:CDS 40.0%
! AGATTTAGGTGGTGGTGATT+CGG + chr5_3:12508135-12508154 Msa0799330:CDS 40.0%
GACACTGTTGAACAAACAAG+TGG + chr5_3:12508229-12508248 Msa0799330:CDS 40.0%
AAGTGGCTGTAGTTTGAAGA+AGG + chr5_3:12508246-12508265 Msa0799330:CDS 40.0%
ACTTGATCAGATAAGACCAC+AGG - chr5_3:12508277-12508296 None:intergenic 40.0%
!! TGTGGTCTTATCTGATCAAG+TGG + chr5_3:12508276-12508295 Msa0799330:CDS 40.0%
CTTATCTGATCAAGTGGATG+TGG + chr5_3:12508282-12508301 Msa0799330:CDS 40.0%
TGAACCTGCAAAAGTGGTAT+TGG + chr5_3:12508321-12508340 Msa0799330:CDS 40.0%
CTTGAAAAAGGAAGATCCTG+TGG + chr5_3:12508390-12508409 Msa0799330:CDS 40.0%
TCTCATCTCATCAAGTGGAT+GGG + chr5_3:12508413-12508432 Msa0799330:CDS 40.0%
! TCAAGTGGATGGGGATATTT+TGG + chr5_3:12508423-12508442 Msa0799330:CDS 40.0%
AGCTTCAAAAGTGGAATTGG+TGG + chr5_3:12508456-12508475 Msa0799330:CDS 40.0%
GCTTCAAAAGTGGAATTGGT+GGG + chr5_3:12508457-12508476 Msa0799330:CDS 40.0%
TGAAGACTGTAGCTTGAGAA+AGG + chr5_3:12508510-12508529 Msa0799330:CDS 40.0%
CAATTGATGAGATGAGACCA+TGG - chr5_3:12508542-12508561 None:intergenic 40.0%
CATGGTCTCATCTCATCAAT+TGG + chr5_3:12508540-12508559 Msa0799330:CDS 40.0%
GAGTCTACTTTGGCAAATGA+CGG + chr5_3:12508697-12508716 Msa0799330:CDS 40.0%
CGGTATGGAAACTTCAGATA+TGG + chr5_3:12508741-12508760 Msa0799330:CDS 40.0%
!!! AACGCTGCAACTTTTTTACG+AGG - chr5_3:12508934-12508953 None:intergenic 40.0%
!! AGCTGATTTTGAAGGGAATG+CGG + chr5_3:12509101-12509120 Msa0799330:CDS 40.0%
ACCATCTACTGAGATGAGAT+TGG + chr5_3:12509146-12509165 Msa0799330:CDS 40.0%
ATGAACATCGTTAAGGTCGA+GGG + chr5_3:12509204-12509223 Msa0799330:CDS 40.0%
GAAAGTAGTGCTAGGTTTGA+TGG + chr5_3:12509290-12509309 Msa0799330:CDS 40.0%
GAACAAATATCAGATCCCCA+AGG - chr5_3:12509330-12509349 None:intergenic 40.0%
!! AGTTGATTTTTATGCCCACC+TGG + chr5_3:12509404-12509423 Msa0799330:CDS 40.0%
!!! CTCTTTTCTTTTTCAACGGC+TGG - chr5_3:12509482-12509501 None:intergenic 40.0%
CATGGGTCAATTAGTAACAC+GGG + chr5_3:12509521-12509540 Msa0799330:CDS 40.0%
TTCTACAAACAGCTTGGAAC+AGG - chr5_3:12509701-12509720 None:intergenic 40.0%
! TAGAAAGCTTTTGCAGGAAG+CGG + chr5_3:12509716-12509735 Msa0799330:CDS 40.0%
AGGGAGCTATGTTAATGAAG+GGG + chr5_3:12509812-12509831 Msa0799330:CDS 40.0%
TAATGAAGGGGAGAAGATCA+TGG + chr5_3:12509824-12509843 Msa0799330:CDS 40.0%
AATGAAGGGGAGAAGATCAT+GGG + chr5_3:12509825-12509844 Msa0799330:CDS 40.0%
AATCTATACCACCCTGAATC+TGG - chr5_3:12509923-12509942 None:intergenic 40.0%
! GCAACTAGTATTGTTGCTTC+CGG + chr5_3:12509969-12509988 Msa0799330:CDS 40.0%
! CAACTAGTATTGTTGCTTCC+GGG + chr5_3:12509970-12509989 Msa0799330:CDS 40.0%
! AACTAGTATTGTTGCTTCCG+GGG + chr5_3:12509971-12509990 Msa0799330:CDS 40.0%
CAGAAGATCAGAAGCTTGAA+CGG + chr5_3:12510075-12510094 Msa0799330:CDS 40.0%
AGAAGATCAGAAGCTTGAAC+GGG + chr5_3:12510076-12510095 Msa0799330:CDS 40.0%
!! TGCTTTGAAGAATAGTAGCG+AGG + chr5_3:12510106-12510125 Msa0799330:CDS 40.0%
CGAGGTCAAGAATTCTGTTA+GGG + chr5_3:12510124-12510143 Msa0799330:CDS 40.0%
GAATTCTGTTAGGGTGATAC+GGG + chr5_3:12510133-12510152 Msa0799330:CDS 40.0%
AATTCTGTTAGGGTGATACG+GGG + chr5_3:12510134-12510153 Msa0799330:CDS 40.0%
TGAAGTTGAGTCATATTGGC+AGG + chr5_3:12510208-12510227 Msa0799330:CDS 40.0%
TGAGTCATATTGGCAGGATA+TGG + chr5_3:12510214-12510233 Msa0799330:CDS 40.0%
GAGTCATATTGGCAGGATAT+GGG + chr5_3:12510215-12510234 Msa0799330:CDS 40.0%
AGTCATATTGGCAGGATATG+GGG + chr5_3:12510216-12510235 Msa0799330:CDS 40.0%
TTATAAACCAGCTTCCCATG+TGG - chr5_3:12510242-12510261 None:intergenic 40.0%
CGCGTTGAAGATATTTCCTA+CGG + chr5_3:12510350-12510369 Msa0799330:CDS 40.0%
GCGTTGAAGATATTTCCTAC+GGG + chr5_3:12510351-12510370 Msa0799330:CDS 40.0%
ATGGTGTTCACAGCACATAT+GGG - chr5_3:12510389-12510408 None:intergenic 40.0%
TATGGTGTTCACAGCACATA+TGG - chr5_3:12510390-12510409 None:intergenic 40.0%
GGGACAATATTGCAACAATC+AGG - chr5_3:12510461-12510480 None:intergenic 40.0%
TGCAATATTGTCCCTCCAAA+AGG + chr5_3:12510467-12510486 Msa0799330:CDS 40.0%
! GTACAATTACAGCCTTTTGG+AGG - chr5_3:12510482-12510501 None:intergenic 40.0%
GTACACAAGAACATTTCTCG+TGG - chr5_3:12510520-12510539 None:intergenic 40.0%
CTTGTGTACTCAAAAATGGG+GGG + chr5_3:12510531-12510550 Msa0799330:CDS 40.0%
TTGTGTACTCAAAAATGGGG+GGG + chr5_3:12510532-12510551 Msa0799330:CDS 40.0%
AAAACCAAGTCAATGGGATG+GGG + chr5_3:12510692-12510711 Msa0799330:CDS 40.0%
GATAAAACTTCCAGAAGGGA+TGG - chr5_3:12510735-12510754 None:intergenic 40.0%
AAGGAAGCTGAACAAAGAAC+TGG + chr5_3:12510785-12510804 Msa0799330:CDS 40.0%
ACATTCTGGGCATAGAGATT+GGG - chr5_3:12510992-12511011 None:intergenic 40.0%
GGTGATCATAAAGGACATTC+TGG - chr5_3:12511006-12511025 None:intergenic 40.0%
GCAGCAAATAACATGACATG+AGG - chr5_3:12511043-12511062 None:intergenic 40.0%
!! ATACTGCTTTTGTGGTTCTG+TGG + chr5_3:12511153-12511172 Msa0799330:CDS 40.0%
GAATTCGGAGCCATCAATGT+CGG + chr5_3:12507934-12507953 Msa0799330:CDS 45.0%
AGAATTAGGGAAGCCAGTGA+TGG + chr5_3:12507979-12507998 Msa0799330:CDS 45.0%
GAGTCTCCATTTACCATCAC+TGG - chr5_3:12507995-12508014 None:intergenic 45.0%
CAACTATTGTTGATCCGCCT+AGG + chr5_3:12508014-12508033 Msa0799330:CDS 45.0%
ACTTTCCGACGCTTAAACCT+AGG - chr5_3:12508034-12508053 None:intergenic 45.0%
! CGTGATTTTCCGGAAGAATG+TGG + chr5_3:12508064-12508083 Msa0799330:CDS 45.0%
!! ACGAGTGTTGAGGTTAAGAG+TGG + chr5_3:12508109-12508128 Msa0799330:CDS 45.0%
AGTGGTGAAGATTTAGGTGG+TGG + chr5_3:12508127-12508146 Msa0799330:CDS 45.0%
! GATTTAGGTGGTGGTGATTC+GGG + chr5_3:12508136-12508155 Msa0799330:CDS 45.0%
TGATAGTCCCAACGACGAAA+AGG + chr5_3:12508165-12508184 Msa0799330:CDS 45.0%
! TGAGGATCCTTTTCGTCGTT+GGG - chr5_3:12508175-12508194 None:intergenic 45.0%
! TTGAGGATCCTTTTCGTCGT+TGG - chr5_3:12508176-12508195 None:intergenic 45.0%
TGGCTGTAGTTTGAAGAAGG+AGG + chr5_3:12508249-12508268 Msa0799330:CDS 45.0%
TTTGAAGAAGGAGGATCCTG+TGG + chr5_3:12508258-12508277 Msa0799330:CDS 45.0%
! CACTTTTGCAGGTTCATCGT+TGG - chr5_3:12508317-12508336 None:intergenic 45.0%
CAACGATGAACCTGCAAAAG+TGG + chr5_3:12508315-12508334 Msa0799330:CDS 45.0%
! ACCTGCAAAAGTGGTATTGG+TGG + chr5_3:12508324-12508343 Msa0799330:CDS 45.0%
!! CCTGCAAAAGTGGTATTGGT+GGG + chr5_3:12508325-12508344 Msa0799330:CDS 45.0%
ACTTGATGAGATGAGACCAC+AGG - chr5_3:12508409-12508428 None:intergenic 45.0%
TGTGGTCTCATCTCATCAAG+TGG + chr5_3:12508408-12508427 Msa0799330:CDS 45.0%
GTCTCATCTCATCAAGTGGA+TGG + chr5_3:12508412-12508431 Msa0799330:CDS 45.0%
CTCATCTCATCAAGTGGATG+GGG + chr5_3:12508414-12508433 Msa0799330:CDS 45.0%
! AAAAGTGGAATTGGTGGGCA+TGG + chr5_3:12508462-12508481 Msa0799330:CDS 45.0%
GGAAGCTGTGGATATGGAAT+TGG + chr5_3:12508483-12508502 Msa0799330:CDS 45.0%
CTTGAGAAAGGAAGATCCCA+TGG + chr5_3:12508522-12508541 Msa0799330:CDS 45.0%
! AAAACTGACATTGGTGGGCA+TGG + chr5_3:12508594-12508613 Msa0799330:CDS 45.0%
!!! GCTGCAACTTTTTTACGAGG+AGG - chr5_3:12508931-12508950 None:intergenic 45.0%
GCCAATCTCATCTCAGTAGA+TGG - chr5_3:12509150-12509169 None:intergenic 45.0%
TACTGAGATGAGATTGGCAC+TGG + chr5_3:12509152-12509171 Msa0799330:CDS 45.0%
! GGCACTGGATAATCATCATC+AGG + chr5_3:12509167-12509186 Msa0799330:CDS 45.0%
CATGAACATCGTTAAGGTCG+AGG + chr5_3:12509203-12509222 Msa0799330:CDS 45.0%
AGTAGTTTGAAGGTCTCACC+AGG + chr5_3:12509264-12509283 Msa0799330:CDS 45.0%
TCTGTACCACCAATGGATGT+TGG - chr5_3:12509366-12509385 None:intergenic 45.0%
! ATTTTTATGCCCACCTGGAC+AGG + chr5_3:12509409-12509428 Msa0799330:CDS 45.0%
!!! AGTTTTAGACCTGTCCAGGT+GGG - chr5_3:12509421-12509440 None:intergenic 45.0%
AAAACTGCGACCAAGTCCAA+AGG + chr5_3:12509435-12509454 Msa0799330:CDS 45.0%
!! AAAAGTGTCCCAAAACCACG+TGG + chr5_3:12509585-12509604 Msa0799330:CDS 45.0%
AAGATCATGGGATCTGTTCC+TGG + chr5_3:12509837-12509856 Msa0799330:CDS 45.0%
AGATCATGGGATCTGTTCCT+GGG + chr5_3:12509838-12509857 Msa0799330:CDS 45.0%
! ACTAGTATTGTTGCTTCCGG+GGG + chr5_3:12509972-12509991 Msa0799330:CDS 45.0%
TTGATATATACAGGGCAGGG+TGG + chr5_3:12510026-12510045 Msa0799330:CDS 45.0%
CGTTCAAGCTTCTGATCTTC+TGG - chr5_3:12510077-12510096 None:intergenic 45.0%
GAAGATCAGAAGCTTGAACG+GGG + chr5_3:12510077-12510096 Msa0799330:CDS 45.0%
GCGAGGTCAAGAATTCTGTT+AGG + chr5_3:12510123-12510142 Msa0799330:CDS 45.0%
! GGGAATTTTCTCTTTCCCGT+AGG - chr5_3:12510369-12510388 None:intergenic 45.0%
AAGCCTCTAGTCTATGAGTG+TGG + chr5_3:12510593-12510612 Msa0799330:CDS 45.0%
AGCCTCTAGTCTATGAGTGT+GGG + chr5_3:12510594-12510613 Msa0799330:CDS 45.0%
TCCTTGAATTCCATCCCTTC+TGG + chr5_3:12510722-12510741 Msa0799330:CDS 45.0%
TCCAGAAGGGATGGAATTCA+AGG - chr5_3:12510726-12510745 None:intergenic 45.0%
TTGAGTGCGAATCTGGCAAA+AGG - chr5_3:12510880-12510899 None:intergenic 45.0%
CTTGAACTTGAGTGCGAATC+TGG - chr5_3:12510887-12510906 None:intergenic 45.0%
ATTCTGGGCATAGAGATTGG+GGG - chr5_3:12510990-12511009 None:intergenic 45.0%
CATTCTGGGCATAGAGATTG+GGG - chr5_3:12510991-12511010 None:intergenic 45.0%
GACATTCTGGGCATAGAGAT+TGG - chr5_3:12510993-12511012 None:intergenic 45.0%
TCGTAAGTCAGCTCTTGCAA+GGG - chr5_3:12511079-12511098 None:intergenic 45.0%
ATCGTAAGTCAGCTCTTGCA+AGG - chr5_3:12511080-12511099 None:intergenic 45.0%
GATCAAGTTCGTGATTCCGA+TGG + chr5_3:12511115-12511134 Msa0799330:CDS 45.0%
! TGTGGTTCTGTGGAATGTAC+TGG + chr5_3:12511163-12511182 Msa0799330:CDS 45.0%
! GTTCTGTGGAATGTACTGGT+AGG + chr5_3:12511167-12511186 Msa0799330:CDS 45.0%
GGGAAGCCAGTGATGGTAAA+TGG + chr5_3:12507986-12508005 Msa0799330:CDS 50.0%
ATCCGCCTAGGTTTAAGCGT+CGG + chr5_3:12508026-12508045 Msa0799330:CDS 50.0%
TTCCGACGCTTAAACCTAGG+CGG - chr5_3:12508031-12508050 None:intergenic 50.0%
CCAAACGGTCCACATTCTTC+CGG - chr5_3:12508076-12508095 None:intergenic 50.0%
GTACCGTCAGCAGAACCAAA+CGG - chr5_3:12508091-12508110 None:intergenic 50.0%
!! CCCACCAATACCACTTTTGC+AGG - chr5_3:12508328-12508347 None:intergenic 50.0%
! ATTGGTGGGCGTAGAAGCTA+TGG + chr5_3:12508339-12508358 Msa0799330:CDS 50.0%
! ATTGGTGGGCATGGAGACTT+TGG + chr5_3:12508603-12508622 Msa0799330:CDS 50.0%
GGAGACTTTGGATGCGGAAT+TGG + chr5_3:12508615-12508634 Msa0799330:CDS 50.0%
!! AAATGACGGACCTGCAGAAC+TGG + chr5_3:12508711-12508730 Msa0799330:CDS 50.0%
!! AGAACTGGCATTGGTCGGTA+TGG + chr5_3:12508726-12508745 Msa0799330:CDS 50.0%
TGGTTCCGGTGCTTGTATGA+AGG + chr5_3:12508885-12508904 Msa0799330:CDS 50.0%
TTCCGGTGCTTGTATGAAGG+AGG + chr5_3:12508888-12508907 Msa0799330:CDS 50.0%
AGCCTCCTTCATACAAGCAC+CGG - chr5_3:12508893-12508912 None:intergenic 50.0%
GCATTGCGTCCACATAAACG+TGG - chr5_3:12508967-12508986 None:intergenic 50.0%
CAGCCAGGATGAGTGTCTAA+AGG + chr5_3:12508996-12509015 Msa0799330:CDS 50.0%
GCTCCTTTAGACACTCATCC+TGG - chr5_3:12509002-12509021 None:intergenic 50.0%
TGGCCAAGTCAGAATGTCCT+TGG + chr5_3:12509310-12509329 Msa0799330:CDS 50.0%
GGCCAAGTCAGAATGTCCTT+GGG + chr5_3:12509311-12509330 Msa0799330:CDS 50.0%
GCCAAGTCAGAATGTCCTTG+GGG + chr5_3:12509312-12509331 Msa0799330:CDS 50.0%
TCCCCAAGGACATTCTGACT+TGG - chr5_3:12509316-12509335 None:intergenic 50.0%
CCTGTCATCTGTACCACCAA+TGG - chr5_3:12509373-12509392 None:intergenic 50.0%
! CCATTGGTGGTACAGATGAC+AGG + chr5_3:12509370-12509389 Msa0799330:CDS 50.0%
TGGTGGTACAGATGACAGGA+AGG + chr5_3:12509374-12509393 Msa0799330:CDS 50.0%
GGTGGTACAGATGACAGGAA+GGG + chr5_3:12509375-12509394 Msa0799330:CDS 50.0%
!!! CAGTTTTAGACCTGTCCAGG+TGG - chr5_3:12509422-12509441 None:intergenic 50.0%
!!! TCGCAGTTTTAGACCTGTCC+AGG - chr5_3:12509425-12509444 None:intergenic 50.0%
TGGTCATGAGAGTGACTCAG+TGG + chr5_3:12509647-12509666 Msa0799330:CDS 50.0%
GATCATGGGATCTGTTCCTG+GGG + chr5_3:12509839-12509858 Msa0799330:CDS 50.0%
TCTGTTCCTGGGGTTGAAGT+TGG + chr5_3:12509849-12509868 Msa0799330:CDS 50.0%
TCATCACCAACTTCAACCCC+AGG - chr5_3:12509858-12509877 None:intergenic 50.0%
TAAGTCATCAGCATAGCCCC+CGG - chr5_3:12509991-12510010 None:intergenic 50.0%
GATACGGGGATCTGAATCAG+CGG + chr5_3:12510148-12510167 Msa0799330:CDS 50.0%
GTTTCGCTTGCGAAGAAAGC+CGG + chr5_3:12510262-12510281 Msa0799330:CDS 50.0%
TTTCGCTTGCGAAGAAAGCC+GGG + chr5_3:12510263-12510282 Msa0799330:CDS 50.0%
! TCAACCAGAGCTTGCTTGGA+AGG + chr5_3:12510286-12510305 Msa0799330:CDS 50.0%
AGTACCTTCCAAGCAAGCTC+TGG - chr5_3:12510293-12510312 None:intergenic 50.0%
AGGGGGGTTCTCTTCATCTA+TGG - chr5_3:12510408-12510427 None:intergenic 50.0%
!! GTTGGAGGGCACTTGCATTT+AGG - chr5_3:12510620-12510639 None:intergenic 50.0%
! TACACCCCATCCCATTGACT+TGG - chr5_3:12510699-12510718 None:intergenic 50.0%
TGGAGAGGTTCTTGAGGACA+AGG + chr5_3:12510766-12510785 Msa0799330:CDS 50.0%
ACTATCGATGCCGCTCAGTT+CGG + chr5_3:12510932-12510951 Msa0799330:CDS 50.0%
CCCTACATTACCGAACTGAG+CGG - chr5_3:12510945-12510964 None:intergenic 50.0%
CCGCTCAGTTCGGTAATGTA+GGG + chr5_3:12510942-12510961 Msa0799330:CDS 50.0%
AGAGATTGGGGGAGCAACTA+TGG - chr5_3:12510979-12510998 None:intergenic 50.0%
CATGAGGAACCCTGTTGTCA+TGG - chr5_3:12511027-12511046 None:intergenic 50.0%
TAAGTCAGCTCTTGCAAGGG+AGG - chr5_3:12511076-12511095 None:intergenic 50.0%
CCGGAAGAATGTGGACCGTT+TGG + chr5_3:12508073-12508092 Msa0799330:CDS 55.0%
!! GGACCGTTTGGTTCTGCTGA+CGG + chr5_3:12508085-12508104 Msa0799330:CDS 55.0%
! TGCTGACGGTACGAGTGTTG+AGG + chr5_3:12508099-12508118 Msa0799330:CDS 55.0%
! ATTGGTGGGCATGGAAGCTG+TGG + chr5_3:12508471-12508490 Msa0799330:CDS 55.0%
GGGCATGGAAGCTGTGGATA+TGG + chr5_3:12508477-12508496 Msa0799330:CDS 55.0%
GGGCATGGAGACTTTGGATG+CGG + chr5_3:12508609-12508628 Msa0799330:CDS 55.0%
!! CCTGCAGAACTGGCATTGGT+CGG + chr5_3:12508721-12508740 Msa0799330:CDS 55.0%
GACATAGCTACCTCGCCAAC+TGG - chr5_3:12508826-12508845 None:intergenic 55.0%
ACACTCATCCTGGCTGAGAC+GGG - chr5_3:12508992-12509011 None:intergenic 55.0%
GACACTCATCCTGGCTGAGA+CGG - chr5_3:12508993-12509012 None:intergenic 55.0%
AGGGAATGCGGTCAAGAAGC+TGG + chr5_3:12509113-12509132 Msa0799330:CDS 55.0%
GTTTGAAGGTCTCACCAGGC+AGG + chr5_3:12509268-12509287 Msa0799330:CDS 55.0%
CCTAGCACTACTTTCCTGCC+TGG - chr5_3:12509285-12509304 None:intergenic 55.0%
CCAGGCAGGAAAGTAGTGCT+AGG + chr5_3:12509282-12509301 Msa0799330:CDS 55.0%
ATGAGAGTGACTCAGTGGCC+CGG + chr5_3:12509652-12509671 Msa0799330:CDS 55.0%
CAGTGGCCCGGAATAAAGTG+AGG + chr5_3:12509664-12509683 Msa0799330:CDS 55.0%
TGGCCTTCATCGCCAGATTC+AGG + chr5_3:12509908-12509927 Msa0799330:CDS 55.0%
GGCCTTCATCGCCAGATTCA+GGG + chr5_3:12509909-12509928 Msa0799330:CDS 55.0%
CACCCTGAATCTGGCGATGA+AGG - chr5_3:12509914-12509933 None:intergenic 55.0%
CTTCATCGCCAGATTCAGGG+TGG + chr5_3:12509912-12509931 Msa0799330:CDS 55.0%
! CAAGCAAGCTCTGGTTGACC+CGG - chr5_3:12510284-12510303 None:intergenic 55.0%
GGCCCACACTCATAGACTAG+AGG - chr5_3:12510599-12510618 None:intergenic 55.0%
GCCGCTCAGTTCGGTAATGT+AGG + chr5_3:12510941-12510960 Msa0799330:CDS 55.0%
CGGACCTGCAGAACTGGCAT+TGG + chr5_3:12508717-12508736 Msa0799330:CDS 60.0%
CCGACCAATGCCAGTTCTGC+AGG - chr5_3:12508724-12508743 None:intergenic 60.0%
!! TCAGAGGCATCGGCTCCAGT+TGG + chr5_3:12508808-12508827 Msa0799330:CDS 60.0%
CACTCATCCTGGCTGAGACG+GGG - chr5_3:12508991-12509010 None:intergenic 60.0%
CGGGGATCTGAATCAGCGGA+TGG + chr5_3:12510152-12510171 Msa0799330:CDS 60.0%
TGGCAGGATATGGGGCCACA+TGG + chr5_3:12510224-12510243 Msa0799330:CDS 60.0%
GGCAGGATATGGGGCCACAT+GGG + chr5_3:12510225-12510244 Msa0799330:CDS 60.0%
TATGGGGCCACATGGGAAGC+TGG + chr5_3:12510232-12510251 Msa0799330:CDS 60.0%
! CGGGTCAACCAGAGCTTGCT+TGG + chr5_3:12510282-12510301 Msa0799330:CDS 60.0%
CAATGCTCCCCGTCTCAGCC+AGG + chr5_3:12508981-12509000 Msa0799330:CDS 65.0%
!! GGCATCGGCTCCAGTTGGCG+AGG + chr5_3:12508813-12508832 Msa0799330:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 12507932 12511198 12507932 ID=Msa0799330;Name=Msa0799330
chr5_3 mRNA 12507932 12511198 12507932 ID=Msa0799330-mRNA-1;Parent=Msa0799330;Name=Msa0799330-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|1088
chr5_3 exon 12507932 12511198 12507932 ID=Msa0799330-mRNA-1:exon:5130;Parent=Msa0799330-mRNA-1
chr5_3 CDS 12507932 12511198 12507932 ID=Msa0799330-mRNA-1:cds;Parent=Msa0799330-mRNA-1
Gene Sequence

>Msa0799330

ATGAATTCGGAGCCATCAATGTCGGTTTGTGATGAACATTCTGAAGAAGAATTAGGGAAGCCAGTGATGGTAAATGGAGACTCAACTATTGTTGATCCGCCTAGGTTTAAGCGTCGGAAAGTTTCTGCTGTTCGTGATTTTCCGGAAGAATGTGGACCGTTTGGTTCTGCTGACGGTACGAGTGTTGAGGTTAAGAGTGGTGAAGATTTAGGTGGTGGTGATTCGGGTGAAGCTGATAGTCCCAACGACGAAAAGGATCCTCAAAATTTTGAGTTCAATGAAGATTTGTTTGTTGCAGACACTGTTGAACAAACAAGTGGCTGTAGTTTGAAGAAGGAGGATCCTGTGGTCTTATCTGATCAAGTGGATGTGGGTAGTTTTGCCAACGATGAACCTGCAAAAGTGGTATTGGTGGGCGTAGAAGCTATGGATATTAGTTTTGAAACTGAAGACTGTAGCTTGAAAAAGGAAGATCCTGTGGTCTCATCTCATCAAGTGGATGGGGATATTTTGGTTAACGATGAAGCTTCAAAAGTGGAATTGGTGGGCATGGAAGCTGTGGATATGGAATTGGAAACTGAAGACTGTAGCTTGAGAAAGGAAGATCCCATGGTCTCATCTCATCAATTGGATGTGCCTATTTTGGATAATAACGAAGATACAAAACTGACATTGGTGGGCATGGAGACTTTGGATGCGGAATTGGCAACTGAAAGCTGTAGTTTGAAGAACGAAAATGCAGCGATCTTATCTTATCAAATTGATGAGTCTACTTTGGCAAATGACGGACCTGCAGAACTGGCATTGGTCGGTATGGAAACTTCAGATATGGAATTTACAACAGAAGGCTCCGTAAAACAAGATTTATCTTATATATCAGAGGCATCGGCTCCAGTTGGCGAGGTAGCTATGTCTGATAACTCAAAATCCTCATTGTCCAATATCAATATAGGTGGTTCCGGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATCCTCCTCGTAAAAAAGTTGCAGCGTTAAGAGATTTTCCACGTTTATGTGGACGCAATGCTCCCCGTCTCAGCCAGGATGAGTGTCTAAAGGAGCTCGCTTCTTTGAAAGAAGTTGCAGCTACTGACCTACAAGAAGCAGAAAATAACAAAAGAAAGTTTGCCAACTTTGTTGAAGCTGATTTTGAAGGGAATGCGGTCAAGAAGCTGGATGTAGCTGAACCATCTACTGAGATGAGATTGGCACTGGATAATCATCATCAGGTTAAAGTGGAAAACATGAACATCGTTAAGGTCGAGGGAACATCAGAGCTAGATATTGATTACCCAGAACTCGAAAGTAGTTTGAAGGTCTCACCAGGCAGGAAAGTAGTGCTAGGTTTGATGGCCAAGTCAGAATGTCCTTGGGGATCTGATATTTGTTCCCCCAAATTTAAACCAACATCCATTGGTGGTACAGATGACAGGAAGGGAAAGAAAGTTGATTTTTATGCCCACCTGGACAGGTCTAAAACTGCGACCAAGTCCAAAGGTGTACTAAATCATTCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATGGGTCAATTAGTAACACGGGAGAAGAATTCTCTAGATCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAACCACGTGGTTATGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTAAGTGGTCATGAGAGTGACTCAGTGGCCCGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCAAGCTGTTTGTAGAAAGCTTTTGCAGGAAGCGGAAGCAAAACCAAAGTCAAATGTGAAAGAATCAAAGAGGGTTGATTTACAAGCTTCAAAAATACTTAAGGAAAAAGGGAGCTATGTTAATGAAGGGGAGAAGATCATGGGATCTGTTCCTGGGGTTGAAGTTGGTGATGAATTTCAATACAGAATAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATATGAAGCAAAAAAACAAGGTCCTTGCAACTAGTATTGTTGCTTCCGGGGGCTATGCTGATGACTTAGATAATGCAGATGTTTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGCAATCTTGCTTTGAAGAATAGTAGCGAGGTCAAGAATTCTGTTAGGGTGATACGGGGATCTGAATCAGCGGATGGAAAAAGCAAGATATATGTTTACGATGGACTCTATGAAGTTGAGTCATATTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAAAGCCGGGTCAACCAGAGCTTGCTTGGAAGGTACTGAAGAAATCTAAAAAGTTCAAAAAAAGAGAAGGTGTACGCGTTGAAGATATTTCCTACGGGAAAGAGAAAATTCCCATATGTGCTGTGAACACCATAGATGAAGAGAACCCCCCTCCATTTAAATACATAACTAAGATGATGTATCCTGATTGTTGCAATATTGTCCCTCCAAAAGGCTGTAATTGTACTAATGGATGCTCTGACCACGAGAAATGTTCTTGTGTACTCAAAAATGGGGGGGAGATTCCATTTAATCATAATGGAGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGGCCTAAATGCAAGTGCCCTCCAACTTGTTATAATAGAGTCAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAAGTCAATGGGATGGGGTGTAAGATCCTTGAATTCCATCCCTTCTGGAAGTTTTATCTGTGAATATATTGGAGAGGTTCTTGAGGACAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACAAAAACAACAGTAATCTTTGGGATGGACTTTCGAACCTTTTGCCAGATTCGCACTCAAGTTCAAGTGAAGTAGTGAATGATGTTGGCTTCACTATCGATGCCGCTCAGTTCGGTAATGTAGGGAGATTCATTAACCATAGTTGCTCCCCCAATCTCTATGCCCAGAATGTCCTTTATGATCACCATGACAACAGGGTTCCTCATGTCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGATTACAATTACACGATAGATCAAGTTCGTGATTCCGATGGCAATATCAAAAAGAAATACTGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGTTGTATTGA
Protein sequence

>Msa0799330

MNSEPSMSVCDEHSEEELGKPVMVNGDSTIVDPPRFKRRKVSAVRDFPEECGPFGSADGTSVEVKSGEDLGGGDSGEADSPNDEKDPQNFEFNEDLFVADTVEQTSGCSLKKEDPVVLSDQVDVGSFANDEPAKVVLVGVEAMDISFETEDCSLKKEDPVVSSHQVDGDILVNDEASKVELVGMEAVDMELETEDCSLRKEDPMVSSHQLDVPILDNNEDTKLTLVGMETLDAELATESCSLKNENAAILSYQIDESTLANDGPAELALVGMETSDMEFTTEGSVKQDLSYISEASAPVGEVAMSDNSKSSLSNINIGGSGACMKEALTKRYPPRKKVAALRDFPRLCGRNAPRLSQDECLKELASLKEVAATDLQEAENNKRKFANFVEADFEGNAVKKLDVAEPSTEMRLALDNHHQVKVENMNIVKVEGTSELDIDYPELESSLKVSPGRKVVLGLMAKSECPWGSDICSPKFKPTSIGGTDDRKGKKVDFYAHLDRSKTATKSKGVLNHSGHQPLKKKRENSSSDDMGQLVTREKNSLDPNENNKHFKSVPKPRGYVNVFPLGRSNLSGHESDSVARNKVRKTLRLFQAVCRKLLQEAEAKPKSNVKESKRVDLQASKILKEKGSYVNEGEKIMGSVPGVEVGDEFQYRIELNIIGLHRQIQGGIDYMKQKNKVLATSIVASGGYADDLDNADVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGSESADGKSKIYVYDGLYEVESYWQDMGPHGKLVYKFRLRRKPGQPELAWKVLKKSKKFKKREGVRVEDISYGKEKIPICAVNTIDEENPPPFKYITKMMYPDCCNIVPPKGCNCTNGCSDHEKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPPTCYNRVSQLGINIQLEIFKTKSMGWGVRSLNSIPSGSFICEYIGEVLEDKEAEQRTGNDEYLFDIGNNKNNSNLWDGLSNLLPDSHSSSSEVVNDVGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDNRVPHVMLFAAENIPPLQELTYDYNYTIDQVRDSDGNIKKKYCFCGSVECTGRLY*