AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0841090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0841090 MtrunA17_Chr5g0410261 83.413 1049 140 10 1 1018 10 1055 0.0 1687
Msa0841090 MtrunA17_Chr5g0410481 70.620 1113 262 20 1 1084 1 1077 0.0 1457
Msa0841090 MtrunA17_Chr5g0410301 76.297 983 191 15 5 964 1 964 0.0 1434
Msa0841090 MtrunA17_Chr5g0410351 67.075 1142 277 29 5 1092 1 1097 0.0 1375
Msa0841090 MtrunA17_Chr5g0410161 60.798 1028 336 23 95 1090 252 1244 0.0 1133
Msa0841090 MtrunA17_Chr5g0410161 43.077 325 145 13 1 295 1 315 2.63e-53 204
Msa0841090 MtrunA17_Chr5g0410401 47.143 840 361 23 132 933 17 811 0.0 631
Msa0841090 MtrunA17_Chr2g0316291 32.631 996 540 34 136 1081 173 1087 5.72e-118 390
Msa0841090 MtrunA17_Chr4g0010261 31.018 1022 538 32 48 1020 106 1009 5.91e-106 356
Msa0841090 MtrunA17_Chr4g0010221 31.610 1025 552 35 73 1036 83 1019 3.48e-102 345
Msa0841090 MtrunA17_Chr4g0009781 32.620 935 497 30 135 1023 162 1009 1.56e-101 344
Msa0841090 MtrunA17_Chr6g0456131 28.984 1142 592 38 32 1083 34 1046 1.94e-98 336
Msa0841090 MtrunA17_Chr4g0010201 30.822 1022 544 31 48 1023 106 1010 2.48e-98 337
Msa0841090 MtrunA17_Chr4g0010251 32.333 900 476 28 177 1031 200 1011 1.06e-96 330
Msa0841090 MtrunA17_Chr6g0468151 28.937 1016 563 37 136 1076 154 1085 4.05e-89 311
Msa0841090 MtrunA17_Chr6g0470011 28.302 1113 618 40 57 1076 61 1086 2.70e-88 308
Msa0841090 MtrunA17_Chr6g0470081 28.983 1111 613 41 57 1076 61 1086 6.27e-88 307
Msa0841090 MtrunA17_Chr5g0415471 28.292 1124 608 42 57 1077 65 1093 3.22e-87 305
Msa0841090 MtrunA17_Chr3g0123111 28.508 1119 607 41 57 1076 61 1085 3.19e-86 303
Msa0841090 MtrunA17_Chr6g0468451 28.239 1119 620 42 57 1076 61 1095 2.65e-84 297
Msa0841090 MtrunA17_Chr4g0027251 27.304 1150 656 39 3 1083 6 1044 3.23e-84 295
Msa0841090 MtrunA17_Chr6g0468121 28.713 1111 607 42 55 1076 59 1073 5.46e-83 293
Msa0841090 MtrunA17_Chr6g0468021 29.818 1100 601 46 57 1076 61 1069 6.86e-82 290
Msa0841090 MtrunA17_Chr7g0244231 26.606 1090 589 36 53 1076 57 1001 9.08e-81 285
Msa0841090 MtrunA17_Chr3g0085161 28.718 1069 592 43 102 1076 10 1002 1.85e-79 281
Msa0841090 MtrunA17_Chr3g0086221 26.064 1151 662 39 55 1086 63 1143 6.23e-79 281
Msa0841090 MtrunA17_Chr3g0087581 26.614 1146 659 42 57 1086 65 1144 1.46e-77 278
Msa0841090 MtrunA17_Chr3g0087701 28.241 1080 592 44 107 1076 127 1133 2.94e-77 276
Msa0841090 MtrunA17_Chr3g0084031 26.874 1187 657 48 28 1076 35 1148 3.17e-77 276
Msa0841090 MtrunA17_Chr3g0082811 32.413 688 368 28 135 779 161 794 6.73e-77 270
Msa0841090 MtrunA17_Chr3g0087541 28.893 1066 555 39 131 1076 169 1151 7.36e-77 276
Msa0841090 MtrunA17_Chr6g0456121 28.762 1050 526 40 88 1083 103 984 8.40e-77 273
Msa0841090 MtrunA17_Chr3g0087301 28.629 999 565 38 137 1078 169 1076 8.71e-77 275
Msa0841090 MtrunA17_Chr1g0155321 27.500 1080 590 40 55 1076 59 1003 1.16e-76 273
Msa0841090 MtrunA17_Chr3g0085931 28.378 1110 628 41 57 1076 61 1093 1.41e-76 275
Msa0841090 MtrunA17_Chr3g0086161 26.610 1180 649 46 32 1076 35 1132 1.51e-76 275
Msa0841090 MtrunA17_Chr2g0282991 30.104 960 547 38 166 1056 195 1099 9.24e-76 273
Msa0841090 MtrunA17_Chr3g0082891 31.766 702 366 26 135 778 161 807 9.32e-76 268
Msa0841090 MtrunA17_Chr3g0090141 27.545 1100 607 43 57 1039 71 1097 1.17e-75 273
Msa0841090 MtrunA17_Chr5g0414311 26.969 1016 575 36 137 1077 173 1096 1.48e-75 271
Msa0841090 MtrunA17_Chr3g0089591 25.977 1151 678 38 44 1071 56 1155 2.27e-75 272
Msa0841090 MtrunA17_Chr3g0087841 27.034 1143 644 42 57 1076 71 1146 3.86e-75 270
Msa0841090 MtrunA17_Chr8g0348931 28.102 1064 605 43 44 1013 56 1053 6.82e-75 270
Msa0841090 MtrunA17_Chr3g0085651 28.261 1104 586 50 12 1055 61 1018 9.05e-75 271
Msa0841090 MtrunA17_Chr3g0086621 26.404 1193 644 46 32 1081 35 1136 1.09e-74 269
Msa0841090 MtrunA17_Chr6g0468271 27.596 1098 646 37 57 1076 61 1087 1.45e-74 269
Msa0841090 MtrunA17_Chr3g0085521 28.203 1046 588 39 134 1076 148 1133 9.83e-74 266
Msa0841090 MtrunA17_Chr3g0085091 27.700 1148 633 46 57 1076 66 1144 1.13e-73 266
Msa0841090 MtrunA17_Chr3g0082131 27.606 1199 623 46 57 1076 69 1201 3.09e-73 265
Msa0841090 MtrunA17_Chr3g0085131 27.708 1108 624 42 77 1078 96 1132 3.50e-73 265
Msa0841090 MtrunA17_Chr3g0085801 28.332 1013 522 42 131 1078 171 1044 4.31e-73 263
Msa0841090 MtrunA17_Chr5g0430581 28.036 988 567 38 53 967 57 973 1.58e-72 261
Msa0841090 MtrunA17_Chr5g0430581 36.216 185 108 4 902 1076 791 975 7.77e-14 76.3
Msa0841090 MtrunA17_Chr5g0430621 26.446 1089 589 38 57 1076 61 1006 1.93e-72 261
Msa0841090 MtrunA17_Chr3g0089211 26.771 1087 621 39 38 1037 97 1095 1.98e-72 263
Msa0841090 MtrunA17_Chr3g0113791 27.626 1133 633 44 53 1082 61 1109 2.08e-72 262
Msa0841090 MtrunA17_Chr7g0248531 27.090 897 518 32 57 879 69 903 2.28e-72 259
Msa0841090 MtrunA17_Chr5g0429961 27.604 989 566 36 57 967 61 977 2.48e-72 260
Msa0841090 MtrunA17_Chr5g0429961 33.028 218 117 8 866 1076 784 979 3.23e-12 71.2
Msa0841090 MtrunA17_Chr7g0221481 27.907 860 502 34 32 818 35 849 4.36e-72 257
Msa0841090 MtrunA17_Chr3g0085171 27.387 1110 627 42 77 1076 89 1129 4.47e-72 261
Msa0841090 MtrunA17_Chr3g0090431 27.805 1025 600 37 96 1035 1 970 6.83e-72 260
Msa0841090 MtrunA17_Chr5g0430721 26.849 1095 578 42 57 1076 102 1048 1.27e-71 259
Msa0841090 MtrunA17_Chr3g0091061 26.923 1092 654 47 57 1063 71 1103 1.71e-71 260
Msa0841090 MtrunA17_Chr3g0082881 31.455 763 371 35 120 815 145 822 3.10e-71 255
Msa0841090 MtrunA17_Chr4g0025391 26.411 1045 613 38 57 1013 71 1047 4.53e-71 259
Msa0841090 MtrunA17_Chr3g0089471 25.281 1155 690 39 38 1071 50 1152 5.32e-71 259
Msa0841090 MtrunA17_Chr1g0155991 27.548 1089 580 42 55 1076 59 1005 6.02e-71 256
Msa0841090 MtrunA17_Chr3g0089251 26.841 1073 615 38 38 1013 79 1078 7.27e-71 259
Msa0841090 MtrunA17_Chr8g0352861 26.999 1163 614 49 25 1058 39 1095 8.85e-71 258
Msa0841090 MtrunA17_Chr3g0089541 25.588 1063 632 37 44 1013 56 1052 1.73e-70 257
Msa0841090 MtrunA17_Chr3g0091081 27.083 1104 626 47 57 1056 71 1099 3.27e-70 256
Msa0841090 MtrunA17_Chr3g0086091 27.930 1024 559 41 175 1087 1 956 3.35e-70 253
Msa0841090 MtrunA17_Chr3g0085111 28.027 1049 591 40 131 1076 150 1137 3.91e-70 255
Msa0841090 MtrunA17_Chr3g0090371 27.493 1113 637 45 40 1058 61 1097 4.46e-70 256
Msa0841090 MtrunA17_Chr6g0468101 27.248 1101 607 37 57 1076 61 1048 7.02e-70 254
Msa0841090 MtrunA17_Chr3g0089871 26.799 1056 609 39 57 1037 71 1037 7.86e-70 255
Msa0841090 MtrunA17_Chr5g0430641 26.206 1099 579 37 57 1076 61 1006 1.14e-69 253
Msa0841090 MtrunA17_Chr5g0430511 26.749 1058 611 43 4 967 15 1002 1.64e-69 252
Msa0841090 MtrunA17_Chr3g0089651 26.348 1131 651 48 4 1037 9 1054 3.81e-69 253
Msa0841090 MtrunA17_Chr3g0084051 27.757 1052 574 42 131 1076 169 1140 6.19e-69 252
Msa0841090 MtrunA17_Chr3g0084971 27.677 1102 621 48 57 1056 71 1098 6.36e-69 252
Msa0841090 MtrunA17_Chr6g0470021 29.050 895 493 36 137 959 49 873 7.19e-69 248
Msa0841090 MtrunA17_Chr3g0082871 32.432 703 341 32 57 684 59 702 8.77e-69 244
Msa0841090 MtrunA17_Chr5g0430441 27.024 988 576 36 57 967 61 980 1.11e-68 249
Msa0841090 MtrunA17_Chr5g0430441 31.839 223 124 9 863 1078 783 984 1.47e-16 85.1
Msa0841090 MtrunA17_Chr3g0092261 26.667 1050 605 40 57 1013 116 1093 1.63e-68 251
Msa0841090 MtrunA17_Chr3g0083681 28.119 978 603 36 131 1071 150 1064 2.21e-68 250
Msa0841090 MtrunA17_Chr3g0089781 26.612 977 554 34 44 932 56 957 2.22e-68 249
Msa0841090 MtrunA17_Chr1g0169901 27.757 1052 609 40 57 1036 70 1042 4.34e-68 249
Msa0841090 MtrunA17_Chr3g0085561 27.570 1070 576 46 18 1015 33 975 4.38e-68 248
Msa0841090 MtrunA17_Chr5g0430291 26.441 1006 579 33 57 963 61 1004 4.51e-68 248
Msa0841090 MtrunA17_Chr5g0430291 34.302 172 99 5 906 1076 852 1010 9.52e-14 76.3
Msa0841090 MtrunA17_Chr5g0429951 27.300 989 577 33 57 967 61 985 6.30e-68 247
Msa0841090 MtrunA17_Chr5g0429951 31.481 216 121 9 869 1078 795 989 8.83e-11 66.6
Msa0841090 MtrunA17_Chr3g0082311 27.353 1126 638 44 57 1055 70 1142 7.15e-68 248
Msa0841090 MtrunA17_Chr2g0309721 26.956 1061 610 42 57 1037 71 1046 8.87e-68 249
Msa0841090 MtrunA17_Chr3g0085751 27.395 1044 607 38 131 1076 146 1136 1.23e-67 248
Msa0841090 MtrunA17_Chr6g0470001 30.412 753 417 24 364 1076 8 693 2.82e-67 240
Msa0841090 MtrunA17_Chr3g0086151 27.489 884 507 38 32 844 35 855 2.90e-67 244
Msa0841090 MtrunA17_Chr3g0083591 27.458 1078 623 42 57 1071 66 1047 2.95e-67 247
Msa0841090 MtrunA17_Chr3g0089991 25.911 1208 636 48 44 1055 56 1200 4.36e-67 247
Msa0841090 MtrunA17_Chr3g0089811 26.445 1055 603 39 57 1013 71 1050 4.72e-67 247
Msa0841090 MtrunA17_Chr3g0087731 27.424 959 556 37 175 1076 1 876 6.54e-67 243
Msa0841090 MtrunA17_Chr3g0083641 27.136 1065 663 43 57 1071 64 1065 9.74e-67 245
Msa0841090 MtrunA17_Chr1g0164391 27.223 1091 625 42 91 1063 124 1163 1.25e-66 245
Msa0841090 MtrunA17_Chr1g0164581 26.463 1213 630 46 57 1076 69 1212 1.42e-66 245
Msa0841090 MtrunA17_Chr3g0090651 27.752 854 506 35 57 844 71 879 1.83e-66 243
Msa0841090 MtrunA17_Chr3g0089501 28.756 772 458 29 95 817 126 854 1.97e-66 241
Msa0841090 MtrunA17_Chr3g0089421 25.978 1074 609 40 57 1037 71 1051 2.92e-66 244
Msa0841090 MtrunA17_Chr3g0089601 27.785 799 482 29 95 844 126 878 3.31e-66 241
Msa0841090 MtrunA17_Chr5g0431051 27.614 985 550 39 49 967 95 982 9.37e-66 241
Msa0841090 MtrunA17_Chr5g0431051 39.306 173 85 5 913 1083 837 991 4.75e-15 80.5
Msa0841090 MtrunA17_Chr4g0008461 28.058 1112 604 43 59 1071 56 1070 1.16e-65 242
Msa0841090 MtrunA17_Chr3g0085331 26.763 1177 632 48 32 1054 49 1149 1.83e-65 242
Msa0841090 MtrunA17_Chr3g0092241 27.011 1044 610 38 57 1013 71 1049 2.04e-65 241
Msa0841090 MtrunA17_Chr5g0430141 27.547 1060 607 38 4 967 15 1009 2.15e-65 240
Msa0841090 MtrunA17_Chr5g0430141 34.061 229 123 10 866 1076 793 1011 1.75e-14 78.6
Msa0841090 MtrunA17_Chr3g0085451 27.561 1103 593 47 45 1015 57 1085 2.30e-65 241
Msa0841090 MtrunA17_Chr3g0090401 27.322 1098 612 42 57 1058 282 1289 4.11e-65 241
Msa0841090 MtrunA17_Chr3g0090691 26.745 1017 587 45 95 1055 128 1042 8.78e-65 239
Msa0841090 MtrunA17_Chr3g0089761 26.518 988 540 37 131 1037 166 1048 1.81e-64 239
Msa0841090 MtrunA17_Chr3g0089961 27.304 868 496 31 57 844 71 883 4.04e-64 235
Msa0841090 MtrunA17_Chr3g0083621 27.611 1101 627 47 57 1059 74 1102 1.39e-63 236
Msa0841090 MtrunA17_Chr3g0084061 27.674 1066 570 45 137 1081 165 1150 2.48e-63 234
Msa0841090 MtrunA17_Chr1g0147141 26.571 1050 615 42 57 1037 84 1046 4.46e-63 233
Msa0841090 MtrunA17_Chr3g0086181 27.427 886 513 38 32 848 35 859 4.57e-63 231
Msa0841090 MtrunA17_Chr8g0352831 28.105 1103 613 50 55 1055 69 1093 6.86e-63 234
Msa0841090 MtrunA17_Chr2g0299151 26.457 1115 624 47 57 1059 70 1100 1.21e-62 233
Msa0841090 MtrunA17_Chr3g0080871 28.963 1022 572 42 102 1056 129 1063 1.25e-62 233
Msa0841090 MtrunA17_Chr3g0083751 26.847 1110 630 44 57 1071 72 1094 2.22e-62 232
Msa0841090 MtrunA17_Chr3g0091011 27.764 796 481 24 88 844 103 843 3.39e-62 230
Msa0841090 MtrunA17_Chr6g0468201 30.604 745 407 30 364 1076 8 674 4.02e-62 226
Msa0841090 MtrunA17_Chr3g0085501 28.098 1025 573 41 131 1059 169 1125 1.52e-61 229
Msa0841090 MtrunA17_Chr3g0085471 27.172 990 540 40 131 1045 169 1052 6.40e-61 228
Msa0841090 MtrunA17_Chr5g0414181 28.947 874 492 36 137 951 169 972 7.06e-61 226
Msa0841090 MtrunA17_Chr5g0446611 31.089 698 394 28 166 817 198 854 1.35e-60 224
Msa0841090 MtrunA17_Chr3g0082791 26.667 885 507 30 137 932 175 1006 1.36e-60 225
Msa0841090 MtrunA17_Chr3g0084081 25.790 1171 676 45 29 1076 44 1144 2.29e-60 226
Msa0841090 MtrunA17_Chr5g0414301 31.397 637 315 21 447 1077 45 565 6.65e-60 216
Msa0841090 MtrunA17_Chr3g0085551 27.910 756 452 23 131 842 43 749 6.94e-60 220
Msa0841090 MtrunA17_Chr5g0414201 27.622 858 481 38 137 941 169 939 7.50e-60 223
Msa0841090 MtrunA17_Chr8g0338861 26.838 857 401 27 253 1076 3 666 3.69e-59 216
Msa0841090 MtrunA17_Chr3g0086741 28.922 733 434 27 131 817 177 868 1.02e-58 218
Msa0841090 MtrunA17_Chr5g0417251 29.662 681 397 26 208 862 19 643 1.64e-58 214
Msa0841090 MtrunA17_Chr1g0164611 28.308 869 496 36 166 953 201 1023 5.27e-58 218
Msa0841090 MtrunA17_Chr3g0091971 27.345 1013 594 41 98 1071 118 1027 5.57e-58 218
Msa0841090 MtrunA17_Chr3g0082391 29.985 687 401 23 131 777 166 812 1.12e-57 214
Msa0841090 MtrunA17_Chr8g0356251 27.422 1032 563 47 131 1056 172 1123 7.66e-57 215
Msa0841090 MtrunA17_Chr6g0467961 29.698 761 415 31 137 849 159 847 8.72e-57 212
Msa0841090 MtrunA17_Chr3g0082321 29.144 724 430 24 91 800 124 778 9.36e-57 211
Msa0841090 MtrunA17_Chr2g0299101 28.988 721 390 31 166 817 191 858 1.01e-56 212
Msa0841090 MtrunA17_Chr3g0113781 28.272 764 441 32 222 951 52 742 1.95e-56 209
Msa0841090 MtrunA17_Chr2g0299091 27.252 877 492 37 57 844 37 856 2.62e-56 212
Msa0841090 MtrunA17_Chr3g0083721 29.324 873 487 41 137 952 124 923 3.25e-56 211
Msa0841090 MtrunA17_Chr3g0113481 30.171 759 406 32 53 747 61 759 5.24e-56 208
Msa0841090 MtrunA17_Chr5g0413811 30.827 665 367 26 208 848 30 625 6.12e-56 206
Msa0841090 MtrunA17_Chr5g0413811 45.794 107 58 0 972 1078 559 665 1.10e-15 82.0
Msa0841090 MtrunA17_Chr2g0299121 28.762 751 404 34 166 844 191 882 3.33e-55 209
Msa0841090 MtrunA17_Chr5g0415551 29.458 757 420 35 103 806 2 697 5.09e-55 205
Msa0841090 MtrunA17_Chr7g0218941 23.843 1145 571 37 7 1084 59 969 1.60e-54 206
Msa0841090 MtrunA17_Chr6g0471941 25.767 1075 525 40 60 1076 99 958 1.87e-54 206
Msa0841090 MtrunA17_Chr5g0430951 27.378 862 508 32 57 858 61 864 5.85e-54 204
Msa0841090 MtrunA17_Chr3g0084811 28.737 950 529 45 131 1015 320 1186 1.66e-53 204
Msa0841090 MtrunA17_Chr1g0168901 29.101 756 445 32 131 844 141 847 1.43e-52 200
Msa0841090 MtrunA17_Chr6g0484551 27.175 839 505 32 57 845 71 853 2.40e-52 199
Msa0841090 MtrunA17_Chr3g0082101 26.914 810 465 27 166 932 201 926 5.61e-52 198
Msa0841090 MtrunA17_Chr3g0091121 29.060 702 405 28 361 1037 25 658 3.77e-49 186
Msa0841090 MtrunA17_Chr3g0086071 28.693 704 411 30 347 1023 7 646 4.15e-49 186
Msa0841090 MtrunA17_Chr8g0351811 31.148 549 325 17 557 1076 90 614 4.75e-49 186
Msa0841090 MtrunA17_Chr4g0020501 25.819 1007 498 41 53 951 22 887 5.62e-47 182
Msa0841090 MtrunA17_Chr6g0467911 26.848 771 442 33 57 763 61 773 3.38e-46 179
Msa0841090 MtrunA17_Chr1g0164631 26.524 984 559 41 57 945 70 984 1.41e-45 178
Msa0841090 MtrunA17_Chr5g0430341 29.981 537 322 18 447 967 26 524 7.53e-45 171
Msa0841090 MtrunA17_Chr5g0430341 31.628 215 128 6 869 1081 334 531 3.65e-12 70.5
Msa0841090 MtrunA17_Chr7g0257201 27.326 677 339 29 57 649 65 672 1.21e-43 172
Msa0841090 MtrunA17_Chr7g0257201 33.918 171 101 4 915 1084 705 864 6.57e-16 83.2
Msa0841090 MtrunA17_Chr3g0085711 28.533 750 422 28 398 1076 2 708 4.57e-42 165
Msa0841090 MtrunA17_Chr3g0089911 25.972 643 375 24 55 636 69 671 5.29e-42 164
Msa0841090 MtrunA17_Chr1g0189551 26.145 830 425 33 57 780 93 840 1.07e-41 166
Msa0841090 MtrunA17_Chr1g0189551 33.654 208 123 4 893 1086 666 872 1.07e-17 89.0
Msa0841090 MtrunA17_Chr8g0352211 29.379 531 255 15 558 1076 1534 1956 1.33e-41 167
Msa0841090 MtrunA17_Chr8g0337891 24.606 825 420 30 55 817 63 747 3.75e-41 163
Msa0841090 MtrunA17_Chr4g0071011 29.577 497 294 17 507 967 19 495 6.20e-41 158
Msa0841090 MtrunA17_Chr4g0071011 30.566 265 148 10 831 1076 250 497 3.69e-11 67.0
Msa0841090 MtrunA17_Chr7g0257541 25.499 902 442 39 57 851 67 845 5.01e-40 160
Msa0841090 MtrunA17_Chr7g0257541 34.118 170 100 3 913 1081 704 862 1.29e-17 88.6
Msa0841090 MtrunA17_Chr3g0082351 31.862 521 302 17 552 1037 589 1091 7.48e-40 160
Msa0841090 MtrunA17_Chr3g0082371 31.064 470 262 19 350 806 26 446 1.36e-39 154
Msa0841090 MtrunA17_Chr8g0355411 27.194 809 444 34 55 779 65 812 1.86e-39 158
Msa0841090 MtrunA17_Chr8g0355411 38.462 169 90 3 911 1077 681 837 2.41e-21 100
Msa0841090 MtrunA17_Chr5g0414211 30.841 428 251 14 662 1082 3 392 2.25e-39 151
Msa0841090 MtrunA17_Chr7g0248221 26.032 872 432 33 57 848 65 803 2.74e-39 158
Msa0841090 MtrunA17_Chr7g0248221 33.908 174 103 4 915 1087 690 852 1.94e-15 81.6
Msa0841090 MtrunA17_Chr6g0468131 31.180 356 219 7 735 1076 3 346 4.82e-39 149
Msa0841090 MtrunA17_Chr5g0414161 37.072 321 179 13 540 854 54 357 7.78e-39 150
Msa0841090 MtrunA17_Chr6g0468361 30.638 470 270 18 364 819 8 435 1.01e-38 150
Msa0841090 MtrunA17_Chr6g0468381 30.856 444 253 11 662 1076 86 504 1.96e-38 152
Msa0841090 MtrunA17_Chr3g0089441 28.629 496 307 16 542 1013 84 556 2.41e-38 154
Msa0841090 MtrunA17_Chr6g0468251 31.773 406 232 10 693 1076 51 433 8.98e-38 148
Msa0841090 MtrunA17_Chr7g0257221 26.040 841 429 35 89 848 116 844 1.05e-37 153
Msa0841090 MtrunA17_Chr7g0257221 35.976 164 95 3 915 1078 705 858 1.48e-16 85.1
Msa0841090 MtrunA17_Chr3g0085431 27.920 548 291 18 325 844 2 473 1.05e-36 145
Msa0841090 MtrunA17_Chr1g0169951 26.217 637 348 22 89 666 116 689 3.83e-35 144
Msa0841090 MtrunA17_Chr3g0081361 25.375 867 494 37 47 848 106 884 4.07e-35 145
Msa0841090 MtrunA17_Chr8g0338671 27.586 522 299 20 136 618 51 532 1.42e-34 140
Msa0841090 MtrunA17_Chr5g0433771 25.592 887 424 40 57 848 65 810 2.87e-34 142
Msa0841090 MtrunA17_Chr5g0433771 37.688 199 110 3 893 1077 651 849 4.67e-22 102
Msa0841090 MtrunA17_Chr6g0468341 29.372 446 259 13 662 1076 478 898 2.99e-34 142
Msa0841090 MtrunA17_Chr6g0468341 25.570 395 213 15 45 405 94 441 2.36e-18 91.3
Msa0841090 MtrunA17_Chr3g0081391 24.672 839 458 35 92 848 132 878 3.47e-34 142
Msa0841090 MtrunA17_Chr7g0257191 25.422 830 439 35 89 844 116 839 1.11e-32 137
Msa0841090 MtrunA17_Chr7g0257191 35.673 171 94 4 916 1083 707 864 6.81e-16 83.2
Msa0841090 MtrunA17_Chr6g0475491 24.963 677 357 30 7 618 59 649 1.49e-32 136
Msa0841090 MtrunA17_Chr6g0475491 38.760 129 67 3 748 864 699 827 1.45e-14 78.6
Msa0841090 MtrunA17_Chr8g0338431 26.739 647 296 22 447 1082 48 527 3.19e-32 132
Msa0841090 MtrunA17_Chr2g0299141 29.252 441 229 20 261 661 18 415 5.78e-32 130
Msa0841090 MtrunA17_Chr5g0404741 28.520 554 315 22 166 666 191 716 1.20e-31 134
Msa0841090 MtrunA17_Chr8g0338361 28.429 503 269 25 136 593 33 489 1.33e-31 130
Msa0841090 MtrunA17_Chr8g0346831 24.620 1052 593 46 17 998 32 953 2.15e-31 133
Msa0841090 MtrunA17_Chr8g0346831 28.182 440 220 11 603 1031 584 938 1.08e-29 127
Msa0841090 MtrunA17_Chr8g0338391 25.931 698 391 33 55 681 63 705 3.19e-31 132
Msa0841090 MtrunA17_Chr8g0338391 27.548 363 174 12 738 1082 665 956 4.97e-18 90.1
Msa0841090 MtrunA17_Chr8g0338621 26.753 542 314 19 115 618 147 643 6.21e-31 130
Msa0841090 MtrunA17_Chr5g0415481 28.989 445 235 17 392 816 6 389 6.77e-31 127
Msa0841090 MtrunA17_Chr3g0081191 24.545 770 422 27 110 789 150 850 8.66e-31 131
Msa0841090 MtrunA17_Chr8g0338261 30.226 354 174 8 736 1078 639 930 8.89e-31 131
Msa0841090 MtrunA17_Chr8g0338261 24.965 705 404 28 55 687 63 714 1.15e-30 130
Msa0841090 MtrunA17_Chr2g0309151 25.597 461 264 14 207 649 41 440 9.17e-31 127
Msa0841090 MtrunA17_Chr6g0468111 27.546 599 308 26 86 659 12 509 1.62e-30 127
Msa0841090 MtrunA17_Chr3g0081341 25.194 774 436 29 113 816 216 916 2.10e-29 127
Msa0841090 MtrunA17_Chr5g0430901 30.928 388 211 14 620 1002 526 861 5.38e-29 125
Msa0841090 MtrunA17_Chr3g0091961 26.107 429 255 15 276 681 6 395 1.93e-28 119
Msa0841090 MtrunA17_Chr3g0101321 24.634 751 416 28 166 848 193 861 3.11e-28 122
Msa0841090 MtrunA17_Chr3g0085701 27.327 505 303 18 623 1076 454 945 3.70e-28 122
Msa0841090 MtrunA17_Chr3g0085701 28.302 424 217 19 39 402 42 438 1.37e-22 104
Msa0841090 MtrunA17_Chr5g0410001 24.340 871 477 31 57 815 60 860 6.71e-28 122
Msa0841090 MtrunA17_Chr8g0338251 27.087 587 338 23 57 593 65 611 8.00e-28 121
Msa0841090 MtrunA17_Chr8g0338251 38.211 123 69 1 736 851 626 748 9.43e-18 89.0
Msa0841090 MtrunA17_Chr7g0257551 28.495 372 190 15 89 402 40 393 8.43e-27 114
Msa0841090 MtrunA17_Chr8g0392511 29.781 366 224 13 392 750 1 340 2.15e-26 112
Msa0841090 MtrunA17_Chr6g0468261 33.243 367 187 10 741 1078 3 340 2.22e-26 112
Msa0841090 MtrunA17_Chr2g0282891 27.845 413 224 13 251 651 5 355 2.73e-26 112
Msa0841090 MtrunA17_Chr5g0410031 25.276 815 449 34 57 779 61 807 3.04e-26 116
Msa0841090 MtrunA17_Chr3g0089431 25.962 416 238 16 44 402 56 458 4.23e-26 113
Msa0841090 MtrunA17_Chr2g0299001 25.084 893 495 44 57 848 61 880 1.08e-25 114
Msa0841090 MtrunA17_Chr3g0100761 23.100 671 380 21 57 663 67 665 2.00e-25 113
Msa0841090 MtrunA17_Chr3g0101251 24.299 749 461 29 128 848 168 838 2.33e-25 113
Msa0841090 MtrunA17_Chr3g0112511 23.302 854 480 34 55 814 59 831 2.37e-25 113
Msa0841090 MtrunA17_Chr3g0094301 24.328 707 374 23 131 757 172 797 2.79e-25 113
Msa0841090 MtrunA17_Chr7g0229761 24.328 707 374 23 131 757 172 797 2.79e-25 113
Msa0841090 MtrunA17_Chr4g0051651 24.960 621 348 25 57 592 83 670 3.21e-25 112
Msa0841090 MtrunA17_Chr3g0080731 23.558 624 332 17 122 663 156 716 4.67e-25 112
Msa0841090 MtrunA17_Chr3g0100971 23.415 615 353 18 111 663 147 705 5.99e-25 112
Msa0841090 MtrunA17_Chr3g0081211 22.222 801 455 24 55 757 65 795 6.43e-25 112
Msa0841090 MtrunA17_Chr3g0100961 23.632 804 453 30 86 815 121 837 1.46e-24 111
Msa0841090 MtrunA17_Chr5g0410021 24.809 786 438 31 136 849 159 863 1.43e-23 107
Msa0841090 MtrunA17_Chr6g0468331 36.316 190 105 3 889 1076 496 671 3.01e-23 106
Msa0841090 MtrunA17_Chr6g0468331 25.564 399 227 17 57 405 61 439 6.52e-17 86.3
Msa0841090 MtrunA17_Chr3g0080721 23.668 638 374 21 253 848 49 615 4.09e-23 105
Msa0841090 MtrunA17_Chr3g0080601 24.812 532 311 16 131 615 171 660 4.54e-23 106
Msa0841090 MtrunA17_Chr3g0080651 23.508 553 263 17 131 639 175 611 8.31e-23 105
Msa0841090 MtrunA17_Chr3g0080741 24.737 760 394 30 159 815 194 878 1.04e-22 105
Msa0841090 MtrunA17_Chr8g0355071 32.287 223 114 6 208 402 53 266 1.47e-22 99.8
Msa0841090 MtrunA17_Chr1g0151481 24.115 593 327 20 136 670 177 704 1.48e-22 104
Msa0841090 MtrunA17_Chr3g0101201 24.461 789 436 30 131 848 177 876 2.49e-22 103
Msa0841090 MtrunA17_Chr3g0101181 23.476 771 450 28 147 848 191 890 2.66e-22 103
Msa0841090 MtrunA17_Chr1g0189351 23.645 867 480 37 57 816 66 857 2.77e-22 103
Msa0841090 MtrunA17_Chr3g0081181 24.895 715 410 28 165 816 186 836 4.12e-22 103
Msa0841090 MtrunA17_Chr3g0100731 22.496 609 401 17 259 848 67 623 5.19e-22 102
Msa0841090 MtrunA17_Chr3g0080791 24.913 574 316 21 131 639 172 695 5.23e-22 102
Msa0841090 MtrunA17_Chr3g0101241 24.406 799 463 32 110 848 125 842 6.46e-22 102
Msa0841090 MtrunA17_Chr3g0101271 24.406 799 463 32 110 848 125 842 7.54e-22 102
Msa0841090 MtrunA17_Chr6g0467921 30.464 302 165 8 800 1076 20 301 9.64e-22 98.2
Msa0841090 MtrunA17_Chr7g0255751 35.841 226 130 8 499 722 1 213 2.60e-21 94.0
Msa0841090 MtrunA17_Chr3g0101221 24.169 782 459 36 128 848 171 879 3.60e-21 100
Msa0841090 MtrunA17_Chr3g0101011 24.712 781 459 31 128 848 179 890 3.63e-21 100
Msa0841090 MtrunA17_Chr5g0415511 25.946 555 316 20 137 646 169 673 4.50e-21 99.4
Msa0841090 MtrunA17_Chr5g0415511 34.028 144 83 1 934 1077 562 693 6.09e-14 76.6
Msa0841090 MtrunA17_Chr4g0071021 26.500 400 218 15 55 406 59 430 4.52e-21 97.8
Msa0841090 MtrunA17_Chr3g0089931 24.113 423 254 15 55 431 69 470 4.83e-21 98.6
Msa0841090 MtrunA17_Chr3g0091041 28.713 303 150 13 134 402 169 439 5.54e-21 98.2
Msa0841090 MtrunA17_Chr4g0010491 30.357 280 153 8 135 387 162 426 8.24e-21 96.7
Msa0841090 MtrunA17_Chr3g0101231 23.965 797 435 34 131 848 180 884 1.95e-20 97.8
Msa0841090 MtrunA17_Chr3g0100851 22.609 575 366 17 131 667 60 593 2.27e-20 97.4
Msa0841090 MtrunA17_Chr8g0351821 27.139 409 211 19 57 405 61 442 2.86e-20 95.5
Msa0841090 MtrunA17_Chr3g0100831 23.049 551 327 19 166 663 197 703 4.15e-20 96.7
Msa0841090 MtrunA17_Chr3g0100801 23.744 577 340 21 135 667 139 659 2.90e-19 94.0
Msa0841090 MtrunA17_Chr1g0169941 27.273 319 196 12 206 511 32 327 9.91e-19 89.0
Msa0841090 MtrunA17_Chr3g0084351 25.341 513 265 18 135 583 101 559 1.01e-18 91.3
Msa0841090 MtrunA17_Chr3g0084041 32.143 196 123 5 626 817 1 190 1.11e-18 85.9
Msa0841090 MtrunA17_Chr8g0360991 23.506 770 454 30 57 765 72 767 1.49e-18 92.0
Msa0841090 MtrunA17_Chr5g0430331 26.343 391 215 16 57 395 61 430 1.55e-18 89.7
Msa0841090 MtrunA17_Chr5g0409971 23.780 799 439 30 131 849 158 866 1.61e-18 91.7
Msa0841090 MtrunA17_Chr4g0037421 24.888 671 394 23 223 848 333 938 2.45e-18 90.9
Msa0841090 MtrunA17_Chr3g0080771 26.765 340 174 11 136 425 177 491 3.39e-18 90.5
Msa0841090 MtrunA17_Chr4g0048471 23.005 752 415 37 166 815 48 737 1.07e-17 88.6
Msa0841090 MtrunA17_Chr3g0101331 22.697 749 453 28 166 848 199 887 1.49e-17 88.6
Msa0841090 MtrunA17_Chr3g0081371 28.169 284 149 11 165 406 206 476 1.78e-17 88.2
Msa0841090 MtrunA17_Chr3g0078361 25.678 479 249 22 174 585 3 441 1.81e-17 86.7
Msa0841090 MtrunA17_Chr8g0338681 29.381 194 113 4 222 402 46 228 2.41e-17 82.8
Msa0841090 MtrunA17_Chr5g0414231 25.479 365 190 15 137 456 169 496 3.57e-17 86.3
Msa0841090 MtrunA17_Chr5g0414221 43.137 102 56 1 540 641 48 147 4.79e-17 79.3
Msa0841090 MtrunA17_Chr7g0248441 33.918 171 101 3 915 1084 38 197 6.60e-17 80.5
Msa0841090 MtrunA17_Chr8g0344071 23.958 480 302 16 142 593 452 896 1.10e-16 85.9
Msa0841090 MtrunA17_Chr3g0100261 23.558 832 493 31 55 815 70 829 1.40e-16 85.5
Msa0841090 MtrunA17_Chr1g0159111 22.642 742 429 28 166 815 174 862 1.42e-16 85.1
Msa0841090 MtrunA17_Chr7g0219851 23.206 418 227 17 57 405 64 456 4.00e-16 84.0
Msa0841090 MtrunA17_Chr3g0085481 29.129 333 172 13 630 957 1 274 4.65e-16 81.6
Msa0841090 MtrunA17_Chr5g0417301 23.715 603 323 25 55 606 59 575 5.08e-16 82.8
Msa0841090 MtrunA17_Chr3g0078351 26.952 397 230 16 691 1044 3 382 6.43e-16 81.6
Msa0841090 MtrunA17_Chr1g0189271 26.984 315 169 12 131 402 7 303 4.73e-15 77.8
Msa0841090 MtrunA17_Chr8g0382411 24.841 471 232 16 598 1056 15 375 5.64e-15 78.6
Msa0841090 MtrunA17_Chr8g0382411 24.370 476 296 12 565 1036 6 421 6.95e-14 75.1
Msa0841090 MtrunA17_Chr3g0100681 25.175 286 149 9 166 402 10 279 1.09e-14 78.6
Msa0841090 MtrunA17_Chr3g0107931 23.130 575 358 22 89 620 124 657 2.03e-14 78.6
Msa0841090 MtrunA17_Chr3g0108811 22.857 595 323 24 89 603 113 651 2.48e-14 78.2
Msa0841090 MtrunA17_Chr7g0248411 27.178 287 153 10 89 337 50 318 2.49e-14 75.5
Msa0841090 MtrunA17_Chr5g0417291 28.571 189 119 4 630 816 5 179 2.57e-14 72.8
Msa0841090 MtrunA17_Chr2g0309161 37.273 110 68 1 975 1083 18 127 2.87e-14 70.9
Msa0841090 MtrunA17_Chr1g0197241 25.478 314 178 11 128 407 792 1083 4.27e-14 77.4
Msa0841090 MtrunA17_Chr3g0089921 25.749 334 195 14 722 1037 2 300 7.72e-14 75.5
Msa0841090 MtrunA17_Chr3g0091851 27.149 442 264 21 220 639 183 588 1.31e-13 75.9
Msa0841090 MtrunA17_Chr3g0113491 27.305 282 162 9 746 1024 16 257 3.01e-13 71.6
Msa0841090 MtrunA17_Chr2g0308491 27.734 256 135 11 166 385 17 258 6.05e-13 70.5
Msa0841090 MtrunA17_Chr4g0010481 28.729 181 103 3 447 627 24 178 6.67e-13 68.6
Msa0841090 MtrunA17_Chr3g0108011 21.875 608 344 20 89 626 137 683 6.88e-13 73.6
Msa0841090 MtrunA17_Chr5g0414911 27.305 282 133 13 166 402 181 435 9.21e-13 73.2
Msa0841090 MtrunA17_Chr2g0313461 21.747 1099 689 43 55 1058 69 1091 1.60e-12 72.4
Msa0841090 MtrunA17_Chr4g0048421 22.733 739 423 29 166 815 173 852 1.81e-12 72.0
Msa0841090 MtrunA17_Chr5g0414291 24.619 394 213 15 4 340 15 381 3.10e-12 70.1
Msa0841090 MtrunA17_Chr5g0414171 29.714 175 97 7 247 406 216 379 3.10e-12 70.1
Msa0841090 MtrunA17_Chr3g0101211 25.735 272 139 10 174 402 3 254 3.18e-12 70.1
Msa0841090 MtrunA17_Chr7g0257241 32.759 174 104 5 915 1087 26 187 4.45e-12 67.4
Msa0841090 MtrunA17_Chr6g0478721 28.986 207 119 8 211 402 159 352 4.68e-12 70.5
Msa0841090 MtrunA17_Chr3g0113801 27.809 356 190 15 751 1076 125 443 1.12e-11 68.6
Msa0841090 MtrunA17_Chr8g0363851 34.459 148 78 4 905 1050 480 610 1.25e-11 69.3
Msa0841090 MtrunA17_Chr3g0113741 27.809 356 190 15 751 1076 89 407 1.25e-11 68.2
Msa0841090 MtrunA17_Chr3g0108791 27.778 198 114 7 220 402 69 252 1.27e-11 68.2
Msa0841090 MtrunA17_Chr6g0482351 26.209 393 209 19 728 1055 696 1072 1.58e-11 68.9
Msa0841090 MtrunA17_Chr3g0101391 29.787 141 77 3 277 402 15 148 2.09e-11 68.2
Msa0841090 MtrunA17_Chr3g0113511 28.618 304 161 13 801 1076 132 407 7.92e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0841090 AT3G14460.1 30.103 774 414 33 136 844 169 880 9.81e-65 240
Msa0841090 AT3G14470.1 25.996 954 564 31 72 953 106 989 2.98e-59 222
Msa0841090 AT3G14470.2 25.996 954 564 31 72 953 106 989 2.98e-59 222
Msa0841090 AT1G59218.1 22.622 1083 628 44 31 1002 37 1020 2.39e-27 120
Msa0841090 AT1G59218.2 22.622 1083 628 44 31 1002 37 1020 2.39e-27 120
Msa0841090 AT1G59218.3 22.622 1083 628 44 31 1002 37 1020 2.39e-27 120
Msa0841090 AT1G58848.1 22.622 1083 628 44 31 1002 37 1020 2.39e-27 120
Msa0841090 AT1G58848.2 22.622 1083 628 44 31 1002 37 1020 2.39e-27 120
Msa0841090 AT1G59124.2 23.386 1022 587 40 31 945 37 969 2.48e-27 120
Msa0841090 AT1G58807.1 23.386 1022 587 40 31 945 37 969 2.48e-27 120
Msa0841090 AT1G59124.1 23.984 763 428 30 31 706 37 734 9.71e-25 112
Msa0841090 AT1G58807.2 23.984 763 428 30 31 706 37 734 9.71e-25 112
Msa0841090 AT1G58390.1 23.636 715 396 25 31 662 37 684 1.07e-24 112
Msa0841090 AT1G58390.2 23.636 715 396 25 31 662 37 684 1.07e-24 112
Msa0841090 AT4G26090.1 23.627 783 446 32 145 849 161 869 2.60e-24 110
Msa0841090 AT3G50950.2 23.415 773 440 26 121 822 146 837 9.64e-23 105
Msa0841090 AT3G50950.1 23.415 773 440 26 121 822 146 837 9.64e-23 105
Msa0841090 AT5G35450.2 22.956 893 485 33 57 848 61 851 2.33e-22 104
Msa0841090 AT5G35450.1 22.956 893 485 33 57 848 61 851 2.33e-22 104
Msa0841090 AT3G07040.1 23.229 607 341 21 92 642 121 658 2.58e-22 104
Msa0841090 AT1G59620.2 23.658 596 329 22 131 659 23 559 7.13e-22 102
Msa0841090 AT3G46530.1 25.693 541 298 24 125 615 152 638 3.09e-21 100
Msa0841090 AT4G27220.1 25.813 523 300 23 167 641 137 619 8.33e-21 99.4
Msa0841090 AT4G27220.2 25.813 523 300 23 167 641 145 627 9.70e-21 99.4
Msa0841090 AT1G69550.1 25.275 546 366 11 541 1066 694 1217 1.61e-20 99.0
Msa0841090 AT1G58602.2 22.727 726 411 28 31 662 37 706 1.78e-20 98.6
Msa0841090 AT1G58602.1 22.727 726 411 28 31 662 37 706 1.78e-20 98.6
Msa0841090 AT1G58400.3 23.600 750 431 28 166 844 186 864 6.94e-20 96.3
Msa0841090 AT1G58400.2 23.600 750 431 28 166 844 186 864 6.94e-20 96.3
Msa0841090 AT4G27190.1 25.188 532 295 26 167 641 167 652 2.52e-19 94.7
Msa0841090 AT1G58410.1 22.690 736 423 29 31 662 35 728 2.99e-19 94.4
Msa0841090 AT1G58410.4 22.690 736 423 29 31 662 35 728 2.99e-19 94.4
Msa0841090 AT1G58410.2 22.690 736 423 29 31 662 35 728 2.99e-19 94.4
Msa0841090 AT1G12220.3 23.580 581 320 21 166 695 57 564 1.02e-18 92.4
Msa0841090 AT1G12220.1 23.580 581 320 21 166 695 178 685 1.22e-18 92.4
Msa0841090 AT1G12220.2 23.580 581 320 21 166 695 178 685 1.22e-18 92.4
Msa0841090 AT3G46710.1 27.095 358 204 15 85 407 111 446 1.49e-18 92.0
Msa0841090 AT3G46730.1 23.256 602 368 22 107 661 134 688 1.61e-18 92.0
Msa0841090 AT4G10780.2 25.495 455 232 18 223 641 255 638 3.65e-18 90.9
Msa0841090 AT4G10780.1 25.495 455 232 18 223 641 255 638 3.85e-18 90.9
Msa0841090 AT1G58400.1 23.450 742 432 28 166 844 186 854 8.50e-18 89.7
Msa0841090 AT5G05400.2 23.204 724 437 28 166 822 8 679 1.38e-17 88.6
Msa0841090 AT5G05400.3 23.204 724 437 28 166 822 8 679 1.38e-17 88.6
Msa0841090 AT5G05400.1 23.204 724 437 28 166 822 177 848 1.62e-17 88.6
Msa0841090 AT1G15890.2 28.671 286 144 12 167 410 17 284 2.41e-17 87.8
Msa0841090 AT1G15890.1 28.671 286 144 12 167 410 177 444 3.25e-17 87.8
Msa0841090 AT5G43740.1 23.284 816 467 36 57 760 72 840 6.51e-17 86.7
Msa0841090 AT5G43740.2 23.284 816 467 36 57 760 72 840 6.51e-17 86.7
Msa0841090 AT1G51480.1 25.383 587 327 27 171 678 180 734 3.50e-16 84.3
Msa0841090 AT1G53350.1 22.492 618 336 24 57 598 61 611 3.78e-16 84.3
Msa0841090 AT1G61180.2 23.292 644 338 25 32 574 27 615 4.16e-16 84.3
Msa0841090 AT1G61180.1 23.292 644 338 25 32 574 27 615 4.38e-16 84.0
Msa0841090 AT5G43470.3 22.334 891 502 32 57 848 61 860 8.57e-16 83.2
Msa0841090 AT5G43470.2 22.334 891 502 32 57 848 61 860 8.57e-16 83.2
Msa0841090 AT5G43470.4 22.334 891 502 32 57 848 61 860 8.57e-16 83.2
Msa0841090 AT5G43470.1 22.334 891 502 32 57 848 61 860 8.57e-16 83.2
Msa0841090 AT4G16950.4 25.543 599 330 26 542 1085 576 1113 1.73e-15 82.4
Msa0841090 AT4G16950.2 25.543 599 330 26 542 1085 576 1113 2.10e-15 82.0
Msa0841090 AT4G16950.3 25.543 599 330 26 542 1085 576 1113 2.13e-15 82.0
Msa0841090 AT5G43730.4 24.466 609 342 26 57 593 73 635 2.38e-15 81.6
Msa0841090 AT5G43730.1 24.466 609 342 26 57 593 73 635 2.38e-15 81.6
Msa0841090 AT5G43730.3 24.466 609 342 26 57 593 73 635 2.38e-15 81.6
Msa0841090 AT5G43730.2 24.466 609 342 26 57 593 73 635 2.38e-15 81.6
Msa0841090 AT5G43730.5 24.466 609 342 26 57 593 73 635 2.38e-15 81.6
Msa0841090 AT4G16950.1 25.543 599 330 26 542 1085 576 1113 2.51e-15 82.0
Msa0841090 AT3G04220.1 34.247 146 85 1 915 1060 716 850 5.92e-15 80.5
Msa0841090 AT3G04220.1 34.177 158 90 3 915 1059 669 825 1.42e-12 72.8
Msa0841090 AT3G04220.1 34.459 148 84 3 908 1055 733 867 2.30e-11 68.6
Msa0841090 AT3G04220.3 34.247 146 85 1 915 1060 745 879 6.69e-15 80.1
Msa0841090 AT3G04220.3 34.177 158 90 3 915 1059 698 854 1.55e-12 72.4
Msa0841090 AT1G12290.1 24.943 437 227 19 57 410 28 446 7.05e-15 80.1
Msa0841090 AT5G48620.6 22.857 630 336 24 57 606 61 620 1.61e-14 79.0
Msa0841090 AT5G48620.1 22.857 630 336 24 57 606 61 620 1.61e-14 79.0
Msa0841090 AT5G48620.4 22.857 630 336 24 57 606 61 620 1.61e-14 79.0
Msa0841090 AT5G48620.2 22.857 630 336 24 57 606 61 620 1.61e-14 79.0
Msa0841090 AT5G48620.3 22.857 630 336 24 57 606 61 620 1.61e-14 79.0
Msa0841090 AT5G48620.5 22.857 630 336 24 57 606 61 620 1.61e-14 79.0
Msa0841090 AT5G63020.1 25.170 441 254 19 223 645 256 638 1.92e-14 79.0
Msa0841090 AT1G12290.4 22.573 412 263 13 16 410 32 404 2.24e-14 78.6
Msa0841090 AT1G12290.3 22.573 412 263 13 16 410 32 404 2.24e-14 78.6
Msa0841090 AT1G12290.2 22.573 412 263 13 16 410 32 404 2.24e-14 78.6
Msa0841090 AT3G44480.3 31.771 192 115 5 910 1089 733 920 2.63e-14 78.6
Msa0841090 AT3G44480.5 31.771 192 115 5 910 1089 733 920 2.63e-14 78.6
Msa0841090 AT3G44480.2 31.771 192 115 5 910 1089 733 920 2.63e-14 78.6
Msa0841090 AT3G44480.4 31.771 192 115 5 910 1089 733 920 2.75e-14 78.6
Msa0841090 AT3G44480.1 31.771 192 115 5 910 1089 733 920 2.75e-14 78.6
Msa0841090 AT1G12280.1 24.324 518 288 23 136 600 158 624 4.59e-14 77.4
Msa0841090 AT3G44670.1 34.783 161 93 3 910 1059 735 894 2.69e-13 75.1
Msa0841090 AT3G44670.2 34.783 161 93 3 910 1059 735 894 2.69e-13 75.1
Msa0841090 AT1G50180.1 23.529 561 300 20 166 657 187 687 3.26e-13 74.7
Msa0841090 AT1G61190.2 23.950 476 265 18 157 593 198 615 3.49e-13 74.7
Msa0841090 AT1G61190.3 23.950 476 265 18 157 593 198 615 3.49e-13 74.7
Msa0841090 AT1G61190.1 23.950 476 265 18 157 593 198 615 1.01e-12 73.2
Msa0841090 AT5G44510.1 25.501 349 221 7 715 1059 620 933 1.54e-12 72.8
Msa0841090 AT5G44510.4 25.501 349 221 7 715 1059 620 933 1.62e-12 72.8
Msa0841090 AT5G44510.2 25.501 349 221 7 715 1059 620 933 1.73e-12 72.4
Msa0841090 AT5G44510.3 25.501 349 221 7 715 1059 620 933 1.80e-12 72.4
Msa0841090 AT4G16890.1 24.909 550 330 18 542 1054 579 1082 3.98e-12 71.6
Msa0841090 AT4G16890.5 24.909 550 330 18 542 1054 570 1073 4.33e-12 71.2
Msa0841090 AT1G33560.1 28.505 214 124 4 890 1086 576 777 5.41e-12 70.9
Msa0841090 AT5G45200.3 30.303 165 101 4 916 1067 687 850 1.88e-11 68.9
Msa0841090 AT1G58410.3 21.745 722 415 28 31 662 35 696 2.71e-11 68.6
Msa0841090 AT4G16890.3 24.304 539 331 17 542 1032 570 1079 3.21e-11 68.6
Msa0841090 AT5G11250.3 35.099 151 86 3 908 1058 706 844 3.23e-11 68.6
Msa0841090 AT5G11250.1 35.099 151 86 3 908 1058 706 844 3.23e-11 68.6
Msa0841090 AT5G11250.2 35.099 151 86 3 908 1058 788 926 3.28e-11 68.6
Msa0841090 AT5G45200.1 30.303 165 101 4 916 1067 687 850 3.30e-11 68.6
Msa0841090 AT5G45200.2 30.303 165 101 4 916 1067 443 606 4.01e-11 68.2
Msa0841090 AT5G47250.1 25.532 282 141 10 166 402 178 435 4.49e-11 67.8
Msa0841090 AT1G61300.2 26.592 267 160 9 165 417 94 338 5.00e-11 67.4
Msa0841090 AT1G61300.1 26.217 267 161 9 165 417 94 338 5.41e-11 67.4
Msa0841090 AT3G25510.2 35.461 141 79 3 915 1055 674 802 6.00e-11 67.4
Msa0841090 AT3G25510.1 35.461 141 79 3 915 1055 674 802 6.00e-11 67.4
Msa0841090 AT2G14080.2 32.000 150 91 2 910 1059 584 722 6.87e-11 67.4
Msa0841090 AT2G14080.1 32.000 150 91 2 910 1059 717 855 8.38e-11 67.0

Find 219 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACCACTTTGCAAAATTTA+AGG 0.093242 5_4:-17067626 Msa0841090:CDS
CTCTAAATACTTTGATTATT+AGG 0.129424 5_4:-17067476 Msa0841090:CDS
TCAGGTTCGGCTTCGGATTC+AGG 0.198546 5_4:+17069682 None:intergenic
GCTCTCAGAAAGACCGATTC+AGG 0.203286 5_4:+17069127 None:intergenic
GAGCAAGTTAAAGCGGATTC+TGG 0.235928 5_4:-17070051 Msa0841090:CDS
AATTACCATTGACTTCAATT+TGG 0.236949 5_4:+17067941 None:intergenic
TCTAAATACTTTGATTATTA+GGG 0.237303 5_4:-17067475 Msa0841090:CDS
CATGGAAGGGACTTGAGTTT+TGG 0.253300 5_4:+17067663 None:intergenic
GTGAGGTTACCTATGCTTTC+AGG 0.256013 5_4:+17067573 None:intergenic
CACTTTCTTCTTCCGCTTGA+TGG 0.256408 5_4:+17069347 None:intergenic
TCCCGTGACTTGTTTCTTGC+TGG 0.260401 5_4:+17068682 None:intergenic
ATTCTGGGTTTCAACCTATT+TGG 0.265489 5_4:-17070035 Msa0841090:CDS
TTTCAAAGACTTTGTTCCTT+TGG 0.273157 5_4:-17069374 Msa0841090:CDS
CCTCACTTCACTTGGAAAAC+TGG 0.278250 5_4:-17067556 Msa0841090:CDS
ATCTTCGTTCTCTTACATTA+AGG 0.285530 5_4:-17067692 Msa0841090:CDS
GCATCAATCAAATAATCTTC+TGG 0.291837 5_4:+17069469 None:intergenic
CTCAAATCATCCATGTCTTT+TGG 0.297922 5_4:+17068806 None:intergenic
TTGTACAAATATCGCTATAT+TGG 0.314348 5_4:-17069854 Msa0841090:CDS
CGACGGATTCAACATCAAAT+TGG 0.314530 5_4:+17069995 None:intergenic
CCTGTTGTTATTGCTATTGT+TGG 0.314541 5_4:-17070123 Msa0841090:CDS
GAAGCTTCTCCATGTTGTTA+TGG 0.319283 5_4:+17068900 None:intergenic
CGGTGGTGACGAATGGATTA+AGG 0.328240 5_4:-17069575 Msa0841090:CDS
ATTGCTATTGTTGGGGCTCC+TGG 0.329567 5_4:-17070114 Msa0841090:CDS
AGTTGGAGAACCTTGAGATT+TGG 0.337638 5_4:+17068299 None:intergenic
ATTGTTGGGGCTCCTGGAAT+TGG 0.338075 5_4:-17070108 Msa0841090:CDS
GGTTCTCCAACTTCGGAGAT+TGG 0.338797 5_4:-17068288 Msa0841090:CDS
CTGTTGTTATTGCTATTGTT+GGG 0.343022 5_4:-17070122 Msa0841090:CDS
GAAGTTGCAGAAGAAATTAA+AGG 0.346339 5_4:-17069887 Msa0841090:CDS
CATCAGCATCAGCGCTCTTC+AGG 0.346613 5_4:+17070160 None:intergenic
CGTCGATTTGAATGATTTGA+TGG 0.347192 5_4:-17070418 Msa0841090:CDS
TCATTGTTTCAGCAGATTCA+TGG 0.362330 5_4:-17069745 Msa0841090:CDS
AAGCTTCTCCATGTTGTTAT+GGG 0.363563 5_4:+17068901 None:intergenic
CCTCAACCATCTTGACTTAG+AGG 0.363828 5_4:-17068780 Msa0841090:CDS
GAATCGGTTAATGCATAAAC+TGG 0.368268 5_4:-17069266 Msa0841090:CDS
CTCCCGTTCAGGTTCGGCTT+CGG 0.370051 5_4:+17069675 None:intergenic
ATCAATCAAGAACAGCAATT+TGG 0.375383 5_4:-17069406 Msa0841090:CDS
AATATTCTTTCCATCCTTGA+AGG 0.377368 5_4:-17068222 Msa0841090:CDS
TCCCTCACGATCTCCCGTTC+AGG 0.378223 5_4:+17069664 None:intergenic
GGAAACTCCTCAAGACTTGA+TGG 0.388025 5_4:-17067367 Msa0841090:CDS
TCTTGATGATGAGCTCGTTC+TGG 0.390345 5_4:-17068057 Msa0841090:CDS
AACATCACTGTGGATGTAAT+GGG 0.392569 5_4:-17069217 Msa0841090:CDS
TGAGATTGTAAGTTCCTTCA+AGG 0.393936 5_4:+17068208 None:intergenic
ATGGTCGCACATTGTCTAAC+TGG 0.400245 5_4:-17068403 Msa0841090:CDS
CGAGGGTTGTTAATATTGTA+TGG 0.402688 5_4:+17069079 None:intergenic
AAGCTAACTGAGGACAATAT+TGG 0.419838 5_4:+17068099 None:intergenic
TCCTCAACCTTGGCTTCAAA+AGG 0.423234 5_4:-17070454 Msa0841090:CDS
GGCTTAATCAAGAGGAATCT+TGG 0.427144 5_4:-17069768 Msa0841090:CDS
TTGAGTTCTTGACTCTAAGA+TGG 0.431586 5_4:-17068532 Msa0841090:CDS
AGCAAGTTAAAGCGGATTCT+GGG 0.433876 5_4:-17070050 Msa0841090:CDS
CACGATCTCCCGTTCAGGTT+CGG 0.434777 5_4:+17069669 None:intergenic
TGGTGGGAGAAATTCACAAT+TGG 0.438276 5_4:+17068334 None:intergenic
AAACATCACTGTGGATGTAA+TGG 0.438992 5_4:-17069218 Msa0841090:CDS
TTGCATCTTCCTCATTCAGC+AGG 0.439792 5_4:+17070298 None:intergenic
AAAATTAGATTCTCTGCCTA+AGG 0.441913 5_4:-17067517 Msa0841090:CDS
CAAATCCTCCGGAACTGAAT+GGG 0.442861 5_4:-17067745 Msa0841090:CDS
TTCTTGATAGCTTATTTGCT+AGG 0.449140 5_4:+17070547 None:intergenic
TGAAGATCATTGATCCAAAT+AGG 0.450096 5_4:+17070021 None:intergenic
AATGGGACGGTCTGACTGAA+TGG 0.452294 5_4:-17067728 Msa0841090:CDS
TTCGGCTTCGGATTCAGGTT+CGG 0.452329 5_4:+17069687 None:intergenic
TTAAAGAATTCATCCATTGT+AGG 0.455709 5_4:+17070574 None:intergenic
ATCCGAAGCCGAACCTGAAC+GGG 0.461348 5_4:-17069677 Msa0841090:CDS
CGTGTTGGATCTACATGACT+TGG 0.461427 5_4:-17068984 Msa0841090:CDS
TCTTGATAGCTTATTTGCTA+GGG 0.461782 5_4:+17070548 None:intergenic
ACTAATAGCACTTTCAGATT+CGG 0.462511 5_4:+17068437 None:intergenic
AAAGCATAACTTCTGATAAG+TGG 0.463746 5_4:+17069510 None:intergenic
TTCTGAGAGCAAAGAAACTA+AGG 0.464396 5_4:-17069114 Msa0841090:CDS
CCACATGGAAATTACGCATC+TGG 0.465168 5_4:-17068621 Msa0841090:CDS
ATCTCAAGGTTCTCCAACTT+CGG 0.466049 5_4:-17068295 Msa0841090:CDS
CAGACCGTCCCATTCAGTTC+CGG 0.467694 5_4:+17067737 None:intergenic
GCCAACTCTCTGGTGGAGAT+TGG 0.468668 5_4:+17067907 None:intergenic
AGATCGTGAGGGATTGTGGT+GGG 0.471144 5_4:-17069654 Msa0841090:CDS
ATTCAACTCTGGACTGCTGA+AGG 0.474484 5_4:-17069436 Msa0841090:CDS
AAGCAAAGTGATGGCGGCGG+TGG 0.478519 5_4:-17069592 Msa0841090:CDS
AACCAGACACAGGTGATGAT+TGG 0.479282 5_4:-17067425 Msa0841090:CDS
CGGGAGATCGTGAGGGATTG+TGG 0.483059 5_4:-17069658 Msa0841090:CDS
ATTCATCCATTGTAGGATGT+TGG 0.486920 5_4:+17070581 None:intergenic
GGTGGGAGAAATTCACAATT+GGG 0.488896 5_4:+17068335 None:intergenic
CTTCTCCAAATTGAAGTCAA+TGG 0.490811 5_4:-17067946 Msa0841090:CDS
AAGAGTCCAATCTCCGAAGT+TGG 0.493017 5_4:+17068282 None:intergenic
ACAAATCCTCCGGAACTGAA+TGG 0.494216 5_4:-17067746 Msa0841090:CDS
TAATCAAAGTATTTAGAGAC+AGG 0.495765 5_4:+17067481 None:intergenic
TATGATGAGTTTGTTGCTGT+TGG 0.498147 5_4:-17070225 Msa0841090:CDS
GCAGAAGAAATTAAAGGAGG+AGG 0.498710 5_4:-17069881 Msa0841090:CDS
AAGAAATTAAAGGAGGAGGT+TGG 0.499088 5_4:-17069877 Msa0841090:CDS
TGAAAGTGCTATTAGTCGTC+GGG 0.501082 5_4:-17068430 Msa0841090:CDS
GGCCAATCATCACCTGTGTC+TGG 0.501676 5_4:+17067423 None:intergenic
TTTGAAATGCAACTGAAAGA+TGG 0.502466 5_4:+17068131 None:intergenic
CACGCGTAGTGAATACTTGA+AGG 0.504439 5_4:+17069003 None:intergenic
AACGAGCTCATCATCAAGAC+CGG 0.508941 5_4:+17068061 None:intergenic
GTAGGATGTTGGAGATTGAA+TGG 0.509417 5_4:+17070592 None:intergenic
CTCTCAGAAAGACCGATTCA+GGG 0.509862 5_4:+17069128 None:intergenic
TCCTCACAACACTGCAGTGC+CGG 0.510620 5_4:+17069317 None:intergenic
ATTGACTTCAATTTGGAGAA+GGG 0.511827 5_4:+17067948 None:intergenic
GATGGAGGATCTCCGTCAAA+AGG 0.514680 5_4:-17070400 Msa0841090:CDS
CAAGTATTCACTACGCGTGT+TGG 0.515011 5_4:-17068999 Msa0841090:CDS
CAGAGAGATTGATTCAACTC+TGG 0.516022 5_4:-17069447 Msa0841090:CDS
ACAATTGGGACAGTCGTTCA+AGG 0.517282 5_4:+17068349 None:intergenic
CAAGGAATTGCCAAAAGACA+TGG 0.517933 5_4:-17068816 Msa0841090:CDS
TTCATGTGAGATCCCTGAAT+CGG 0.517946 5_4:-17069140 Msa0841090:CDS
CATTGACTTCAATTTGGAGA+AGG 0.519153 5_4:+17067947 None:intergenic
TTTGATAGTGATTGTCGCAT+CGG 0.519842 5_4:-17069623 Msa0841090:CDS
CCTGTGTCTGGTTGACACCT+TGG 0.520912 5_4:+17067435 None:intergenic
TTCACATCATCAATAGAGCT+TGG 0.521028 5_4:+17068947 None:intergenic
TTTACCTCGTGCGGAAGCCG+AGG 0.521694 5_4:+17069061 None:intergenic
TTGTGAATTTCTCCCACCAA+TGG 0.521992 5_4:-17068330 Msa0841090:CDS
ATGGGACGGTCTGACTGAAT+GGG 0.522965 5_4:-17067727 Msa0841090:CDS
TCTTGACTTAGAGGGATGCT+TGG 0.523718 5_4:-17068771 Msa0841090:CDS
AATATTGTATGGCAAAAGAA+TGG 0.523820 5_4:+17069090 None:intergenic
CGATTTGAATGATTTGATGG+AGG 0.529684 5_4:-17070415 Msa0841090:CDS
AAGAAGAAAGTGACCACCAC+CGG 0.529907 5_4:-17069336 Msa0841090:CDS
ACCAATCTCCACCAGAGAGT+TGG 0.531465 5_4:-17067908 Msa0841090:CDS
TGTTGTTATTGCTATTGTTG+GGG 0.531578 5_4:-17070121 Msa0841090:CDS
CCAACAATAGCAATAACAAC+AGG 0.532803 5_4:+17070123 None:intergenic
ATTGTAAGTTCCTTCAAGGA+TGG 0.533077 5_4:+17068212 None:intergenic
CTATTAGTCGTCGGGTACAA+TGG 0.533841 5_4:-17068422 Msa0841090:CDS
GTCTCAATGTCATGTCCTCA+AGG 0.538362 5_4:-17068834 Msa0841090:CDS
ACAGTTTCAACGTTTGCAAG+TGG 0.540435 5_4:+17068855 None:intergenic
CAAAACTCAAGTCCCTTCCA+TGG 0.540921 5_4:-17067662 Msa0841090:CDS
GTGTTGGATCTACATGACTT+GGG 0.543300 5_4:-17068983 Msa0841090:CDS
GCTTGCATGCCGCTATATCC+CGG 0.545003 5_4:-17068080 Msa0841090:CDS
ACTGCCCCTTGTTATTGCCA+AGG 0.545619 5_4:-17067452 Msa0841090:CDS
AGATTTGGAAGCTGATCCAT+TGG 0.546103 5_4:+17068314 None:intergenic
AAGCATAACTTCTGATAAGT+GGG 0.546114 5_4:+17069511 None:intergenic
ATGGGATCACGATGAGGAGG+AGG 0.546316 5_4:-17068513 Msa0841090:CDS
AAAACTCAAGTCCCTTCCAT+GGG 0.546486 5_4:-17067661 Msa0841090:CDS
CTCCGTCAAAAGGAGAGTAC+TGG 0.548057 5_4:-17070390 Msa0841090:CDS
GGTAGTTACGCGTCTTGCGA+CGG 0.549201 5_4:+17069978 None:intergenic
ACTAAAACGCCTGCTGAATG+AGG 0.550884 5_4:-17070307 Msa0841090:CDS
GCGACAATCACTATCAAAAG+AGG 0.552739 5_4:+17069628 None:intergenic
AGATTCTCTGCCTAAGGGAA+TGG 0.553429 5_4:-17067511 Msa0841090:CDS
CTGAAAGTGCTATTAGTCGT+CGG 0.554787 5_4:-17068431 Msa0841090:CDS
CTCAACCATCTTGACTTAGA+GGG 0.555218 5_4:-17068779 Msa0841090:CDS
TGATGATGAGCTCGTTCTGG+TGG 0.555883 5_4:-17068054 Msa0841090:CDS
CATACAATATTAACAACCCT+CGG 0.557776 5_4:-17069078 Msa0841090:CDS
TGAGTTCTTGACTCTAAGAT+GGG 0.557870 5_4:-17068531 Msa0841090:CDS
CGTTCAAGGTAAACTTAACA+AGG 0.558609 5_4:+17068363 None:intergenic
ATAGGTAACCTCACTTCACT+TGG 0.559515 5_4:-17067564 Msa0841090:CDS
ACTTCTCTGCCTGAAAGCAT+AGG 0.559768 5_4:-17067582 Msa0841090:CDS
AGCACTTTCAGATTCGGATG+TGG 0.560646 5_4:+17068443 None:intergenic
TAGGATGTTGGAGATTGAAT+GGG 0.560672 5_4:+17070593 None:intergenic
TCTGCTTGTATAGAATGAAT+CGG 0.562176 5_4:-17069282 Msa0841090:CDS
CAACCCTCGGCTTCCGCACG+AGG 0.563929 5_4:-17069065 Msa0841090:CDS
TTCAACTCTGGACTGCTGAA+GGG 0.564101 5_4:-17069435 Msa0841090:CDS
CTGGCAAGGCTAGTAATCAC+TGG 0.565560 5_4:-17069247 Msa0841090:CDS
ATAAGATTTGTTATGCAACT+AGG 0.568195 5_4:+17068878 None:intergenic
CTTGATAGCTTATTTGCTAG+GGG 0.569737 5_4:+17070549 None:intergenic
CTTGACATCGACAAATCCTC+CGG 0.572006 5_4:-17067756 Msa0841090:CDS
GAGATCGTGAGGGATTGTGG+TGG 0.574179 5_4:-17069655 Msa0841090:CDS
ATCTTAGAGTCAAGAACTCA+AGG 0.574535 5_4:+17068534 None:intergenic
AGCATCCCTCTAAGTCAAGA+TGG 0.575053 5_4:+17068774 None:intergenic
TTACCTCGTGCGGAAGCCGA+GGG 0.575526 5_4:+17069062 None:intergenic
AACCTGAACGGGAGATCGTG+AGG 0.575667 5_4:-17069666 Msa0841090:CDS
TTGACACCTTGGCAATAACA+AGG 0.576353 5_4:+17067446 None:intergenic
GTTGCAGAAGAAATTAAAGG+AGG 0.580477 5_4:-17069884 Msa0841090:CDS
CAACACTGCAGTGCCGGTGG+TGG 0.580738 5_4:+17069323 None:intergenic
ATGGCGGCGGTGGTGACGAA+TGG 0.580824 5_4:-17069582 Msa0841090:CDS
TTTGGAAGCTGATCCATTGG+TGG 0.580879 5_4:+17068317 None:intergenic
CAGCAATGTTGTCCGCGACA+TGG 0.581341 5_4:+17069815 None:intergenic
GCTGAATGAGGAAGATGCAA+AGG 0.581430 5_4:-17070295 Msa0841090:CDS
ACATCACTGTGGATGTAATG+GGG 0.583077 5_4:-17069216 Msa0841090:CDS
TCCGCTTGATGGAAAACCAA+AGG 0.583826 5_4:+17069358 None:intergenic
ATCTAACTCAAATGCCGAGT+GGG 0.586513 5_4:-17068748 Msa0841090:CDS
GGACGGTCTGACTGAATGGG+AGG 0.587006 5_4:-17067724 Msa0841090:CDS
AATCCGAAGCCGAACCTGAA+CGG 0.589173 5_4:-17069678 Msa0841090:CDS
TTGGAAGCTGATCCATTGGT+GGG 0.589248 5_4:+17068318 None:intergenic
GTCAAACGTAAGATCAATGA+GGG 0.589631 5_4:-17068030 Msa0841090:CDS
GATCGTGAGGGATTGTGGTG+GGG 0.590026 5_4:-17069653 Msa0841090:CDS
AAATTAGATTCTCTGCCTAA+GGG 0.591797 5_4:-17067516 Msa0841090:CDS
GGATCAGCTTCCAAATCTCA+AGG 0.592912 5_4:-17068309 Msa0841090:CDS
TGACGATGAGCAAGTTAAAG+CGG 0.593453 5_4:-17070058 Msa0841090:CDS
GTTGTCATCTTTACCTCGTG+CGG 0.595603 5_4:+17069052 None:intergenic
CTGAATGAGGAAGATGCAAA+GGG 0.596964 5_4:-17070294 Msa0841090:CDS
CTCAAAGACTTGAAACCTTG+TGG 0.599675 5_4:+17067822 None:intergenic
GCCAGCAAGAAACAAGTCAC+GGG 0.600104 5_4:-17068683 Msa0841090:CDS
TAACATTCTGAGAGGCCACA+TGG 0.602052 5_4:-17068636 Msa0841090:CDS
ACCGGCACTGCAGTGTTGTG+AGG 0.605264 5_4:-17069318 Msa0841090:CDS
CCTCTAAGTCAAGATGGTTG+AGG 0.607870 5_4:+17068780 None:intergenic
ACCGTCCCATTCAGTTCCGG+AGG 0.610766 5_4:+17067740 None:intergenic
TACACGTAGCAACCATGTCG+CGG 0.613111 5_4:-17069827 Msa0841090:CDS
TCACAACACTGCAGTGCCGG+TGG 0.616254 5_4:+17069320 None:intergenic
CAAGACGCGTTCACCTTCAG+TGG 0.618649 5_4:+17069957 None:intergenic
AAGTGATCCATCAAGTCTTG+AGG 0.619809 5_4:+17067360 None:intergenic
TGTTGGATCTACATGACTTG+GGG 0.624871 5_4:-17068982 Msa0841090:CDS
CATCACTGTGGATGTAATGG+GGG 0.628607 5_4:-17069215 Msa0841090:CDS
TCATCAAGACCGGGATATAG+CGG 0.630361 5_4:+17068071 None:intergenic
GGTTAATGCATAAACTGGCA+AGG 0.632458 5_4:-17069261 Msa0841090:CDS
GGCCAGCAAGAAACAAGTCA+CGG 0.632847 5_4:-17068684 Msa0841090:CDS
ACCTGAACGGGAGATCGTGA+GGG 0.633772 5_4:-17069665 Msa0841090:CDS
GTGATGAAGAAGCAAAGTGA+TGG 0.634267 5_4:-17069601 Msa0841090:CDS
CGTCAAAAGGAGAGTACTGG+TGG 0.634917 5_4:-17070387 Msa0841090:CDS
GGAGATTGAATGGGAAAGCA+TGG 0.635775 5_4:+17070602 None:intergenic
GTTGCAGGGGCTTAATCAAG+AGG 0.636063 5_4:-17069776 Msa0841090:CDS
ATCACTGTGGATGTAATGGG+GGG 0.638373 5_4:-17069214 Msa0841090:CDS
AAGAAGCAAAGTGATGGCGG+CGG 0.640444 5_4:-17069595 Msa0841090:CDS
TCCTCCGGAACTGAATGGGA+CGG 0.640728 5_4:-17067741 Msa0841090:CDS
ACGAGCTCATCATCAAGACC+GGG 0.642873 5_4:+17068062 None:intergenic
ATGAAGAAGCAAAGTGATGG+CGG 0.642969 5_4:-17069598 Msa0841090:CDS
AGACGCGTAACTACCACTGA+AGG 0.643501 5_4:-17069970 Msa0841090:CDS
GACGGTCTGACTGAATGGGA+GGG 0.643584 5_4:-17067723 Msa0841090:CDS
CCAAGGTGTCAACCAGACAC+AGG 0.647418 5_4:-17067435 Msa0841090:CDS
GACACCTTGGCAATAACAAG+GGG 0.648948 5_4:+17067448 None:intergenic
CGACAATCACTATCAAAAGA+GGG 0.650547 5_4:+17069629 None:intergenic
AAGATGGGATCACGATGAGG+AGG 0.655551 5_4:-17068516 Msa0841090:CDS
TTGATGATGTGAAGTACTTG+AGG 0.655654 5_4:-17068937 Msa0841090:CDS
TGACACCTTGGCAATAACAA+GGG 0.656199 5_4:+17067447 None:intergenic
CAATCTCCAACATCCTACAA+TGG 0.659698 5_4:-17070587 Msa0841090:CDS
AATTTGAAGTCTCTACCACA+AGG 0.663061 5_4:-17067837 Msa0841090:CDS
AGTCAAACGTAAGATCAATG+AGG 0.666772 5_4:-17068031 Msa0841090:CDS
GTGAGCTTACTTATCCCACT+CGG 0.670038 5_4:+17068734 None:intergenic
TCTAAGATGGGATCACGATG+AGG 0.671362 5_4:-17068519 Msa0841090:CDS
TCACTGTGGATGTAATGGGG+GGG 0.680364 5_4:-17069213 Msa0841090:CDS
AGCGGCATGCAAGCTAACTG+AGG 0.682640 5_4:+17068089 None:intergenic
AGCAAGAAACAAGTCACGGG+AGG 0.682949 5_4:-17068680 Msa0841090:CDS
CCAGATGCGTAATTTCCATG+TGG 0.687915 5_4:+17068621 None:intergenic
AGATCTTTCCCATAACAACA+TGG 0.690244 5_4:-17068909 Msa0841090:CDS
GATCTAACTCAAATGCCGAG+TGG 0.692499 5_4:-17068749 Msa0841090:CDS
AAACTCAAGTCCCTTCCATG+GGG 0.727712 5_4:-17067660 Msa0841090:CDS
ACAGATCTTAACATTCTGAG+AGG 0.741662 5_4:-17068644 Msa0841090:CDS
TGGTGACGAAAACATCACTG+TGG 0.799137 5_4:-17069227 Msa0841090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTAAATACTTTGATTATTA+GGG - chr5_4:17070493-17070512 Msa0841090:CDS 15.0%
!! TAAAAATTTCATTTCACTTG+AGG - chr5_4:17070085-17070104 Msa0841090:CDS 20.0%
!! CTCTAAATACTTTGATTATT+AGG - chr5_4:17070492-17070511 Msa0841090:CDS 20.0%
! TTAAAGAATTCATCCATTGT+AGG + chr5_4:17067397-17067416 None:intergenic 25.0%
! ACCAGCTTGAAAAAAATATT+AGG - chr5_4:17067453-17067472 Msa0841090:CDS 25.0%
! CCAGCTTGAAAAAAATATTA+GGG - chr5_4:17067454-17067473 Msa0841090:CDS 25.0%
! TTGTACAAATATCGCTATAT+TGG - chr5_4:17068114-17068133 Msa0841090:CDS 25.0%
!!! TCTTTTTTGGTTGAAGTAAT+TGG + chr5_4:17068250-17068269 None:intergenic 25.0%
! AATATTGTATGGCAAAAGAA+TGG + chr5_4:17068881-17068900 None:intergenic 25.0%
!!! ATAAGATTTGTTATGCAACT+AGG + chr5_4:17069093-17069112 None:intergenic 25.0%
! ATTGTCCTAATCTAAAAAGT+TGG - chr5_4:17069784-17069803 Msa0841090:CDS 25.0%
!!! AATTACCATTGACTTCAATT+TGG + chr5_4:17070030-17070049 None:intergenic 25.0%
!! TAATCAAAGTATTTAGAGAC+AGG + chr5_4:17070490-17070509 None:intergenic 25.0%
!! TTTTTGATATGAGCAATTTG+TGG + chr5_4:17070569-17070588 None:intergenic 25.0%
! TCTTGATAGCTTATTTGCTA+GGG + chr5_4:17067423-17067442 None:intergenic 30.0%
! TTCTTGATAGCTTATTTGCT+AGG + chr5_4:17067424-17067443 None:intergenic 30.0%
!!! CCCTAATATTTTTTTCAAGC+TGG + chr5_4:17067457-17067476 None:intergenic 30.0%
! CTGTTGTTATTGCTATTGTT+GGG - chr5_4:17067846-17067865 Msa0841090:CDS 30.0%
! TGTTGTTATTGCTATTGTTG+GGG - chr5_4:17067847-17067866 Msa0841090:CDS 30.0%
!!! AGTTTTGTTTTTCCAATTCC+AGG + chr5_4:17067875-17067894 None:intergenic 30.0%
TGAAGATCATTGATCCAAAT+AGG + chr5_4:17067950-17067969 None:intergenic 30.0%
GAAGTTGCAGAAGAAATTAA+AGG - chr5_4:17068081-17068100 Msa0841090:CDS 30.0%
AAGCATAACTTCTGATAAGT+GGG + chr5_4:17068460-17068479 None:intergenic 30.0%
AAAGCATAACTTCTGATAAG+TGG + chr5_4:17068461-17068480 None:intergenic 30.0%
GCATCAATCAAATAATCTTC+TGG + chr5_4:17068502-17068521 None:intergenic 30.0%
ATCAATCAAGAACAGCAATT+TGG - chr5_4:17068562-17068581 Msa0841090:CDS 30.0%
TTTCAAAGACTTTGTTCCTT+TGG - chr5_4:17068594-17068613 Msa0841090:CDS 30.0%
TCTGCTTGTATAGAATGAAT+CGG - chr5_4:17068686-17068705 Msa0841090:CDS 30.0%
CATACAATATTAACAACCCT+CGG - chr5_4:17068890-17068909 Msa0841090:CDS 30.0%
ACTAATAGCACTTTCAGATT+CGG + chr5_4:17069534-17069553 None:intergenic 30.0%
AATATTCTTTCCATCCTTGA+AGG - chr5_4:17069746-17069765 Msa0841090:CDS 30.0%
! TCCTAATCTAAAAAGTTGGT+GGG - chr5_4:17069788-17069807 Msa0841090:CDS 30.0%
! TTTGAAATGCAACTGAAAGA+TGG + chr5_4:17069840-17069859 None:intergenic 30.0%
! ATTGACTTCAATTTGGAGAA+GGG + chr5_4:17070023-17070042 None:intergenic 30.0%
!! AAATTTTTAAGCCAACTCTC+TGG + chr5_4:17070074-17070093 None:intergenic 30.0%
ATCTTCGTTCTCTTACATTA+AGG - chr5_4:17070276-17070295 Msa0841090:CDS 30.0%
TGACCACTTTGCAAAATTTA+AGG - chr5_4:17070342-17070361 Msa0841090:CDS 30.0%
! AAGCCTTAAATTTTGCAAAG+TGG + chr5_4:17070348-17070367 None:intergenic 30.0%
AAAATTAGATTCTCTGCCTA+AGG - chr5_4:17070451-17070470 Msa0841090:CDS 30.0%
AAATTAGATTCTCTGCCTAA+GGG - chr5_4:17070452-17070471 Msa0841090:CDS 30.0%
TGCTCATATCAAAAACAAAC+TGG - chr5_4:17070574-17070593 Msa0841090:CDS 30.0%
TATCAAAAACAAACTGGTGA+AGG - chr5_4:17070580-17070599 Msa0841090:CDS 30.0%
TAGGATGTTGGAGATTGAAT+GGG + chr5_4:17067378-17067397 None:intergenic 35.0%
ATTCATCCATTGTAGGATGT+TGG + chr5_4:17067390-17067409 None:intergenic 35.0%
! CTTGATAGCTTATTTGCTAG+GGG + chr5_4:17067422-17067441 None:intergenic 35.0%
!!! TCTTTAACCTTTTGAAGCCA+AGG + chr5_4:17067524-17067543 None:intergenic 35.0%
!! CGTCGATTTGAATGATTTGA+TGG - chr5_4:17067550-17067569 Msa0841090:CDS 35.0%
CGATTTGAATGATTTGATGG+AGG - chr5_4:17067553-17067572 Msa0841090:CDS 35.0%
! CATCTGTAGTTTTCTTCACT+TGG + chr5_4:17067640-17067659 None:intergenic 35.0%
!! TATGATGAGTTTGTTGCTGT+TGG - chr5_4:17067743-17067762 Msa0841090:CDS 35.0%
CCAACAATAGCAATAACAAC+AGG + chr5_4:17067848-17067867 None:intergenic 35.0%
! CCTGTTGTTATTGCTATTGT+TGG - chr5_4:17067845-17067864 Msa0841090:CDS 35.0%
ATTCTGGGTTTCAACCTATT+TGG - chr5_4:17067933-17067952 Msa0841090:CDS 35.0%
GTTGCAGAAGAAATTAAAGG+AGG - chr5_4:17068084-17068103 Msa0841090:CDS 35.0%
AAGAAATTAAAGGAGGAGGT+TGG - chr5_4:17068091-17068110 Msa0841090:CDS 35.0%
!!! AAGACATGTTTTGAAGTTGC+AGG - chr5_4:17068177-17068196 Msa0841090:CDS 35.0%
!!! AGACATGTTTTGAAGTTGCA+GGG - chr5_4:17068178-17068197 Msa0841090:CDS 35.0%
TCATTGTTTCAGCAGATTCA+TGG - chr5_4:17068223-17068242 Msa0841090:CDS 35.0%
!!! GGTGCTACTTTGTTCTTTTT+TGG + chr5_4:17068263-17068282 None:intergenic 35.0%
CGACAATCACTATCAAAAGA+GGG + chr5_4:17068342-17068361 None:intergenic 35.0%
!! TTTGATAGTGATTGTCGCAT+CGG - chr5_4:17068345-17068364 Msa0841090:CDS 35.0%
GAATCGGTTAATGCATAAAC+TGG - chr5_4:17068702-17068721 Msa0841090:CDS 35.0%
AAACATCACTGTGGATGTAA+TGG - chr5_4:17068750-17068769 Msa0841090:CDS 35.0%
AACATCACTGTGGATGTAAT+GGG - chr5_4:17068751-17068770 Msa0841090:CDS 35.0%
! TTCTGAGAGCAAAGAAACTA+AGG - chr5_4:17068854-17068873 Msa0841090:CDS 35.0%
CGAGGGTTGTTAATATTGTA+TGG + chr5_4:17068892-17068911 None:intergenic 35.0%
TTCACATCATCAATAGAGCT+TGG + chr5_4:17069024-17069043 None:intergenic 35.0%
!! TTGATGATGTGAAGTACTTG+AGG - chr5_4:17069031-17069050 Msa0841090:CDS 35.0%
AGATCTTTCCCATAACAACA+TGG - chr5_4:17069059-17069078 Msa0841090:CDS 35.0%
AAGCTTCTCCATGTTGTTAT+GGG + chr5_4:17069070-17069089 None:intergenic 35.0%
! CTCAAATCATCCATGTCTTT+TGG + chr5_4:17069165-17069184 None:intergenic 35.0%
!!! GCAAACATTGTCACTTTTTG+TGG - chr5_4:17069263-17069282 Msa0841090:CDS 35.0%
ACAGATCTTAACATTCTGAG+AGG - chr5_4:17069324-17069343 Msa0841090:CDS 35.0%
! TCTTTAGCAGCTTCTTTTGA+TGG + chr5_4:17069390-17069409 None:intergenic 35.0%
ATCTTAGAGTCAAGAACTCA+AGG + chr5_4:17069437-17069456 None:intergenic 35.0%
! TTGAGTTCTTGACTCTAAGA+TGG - chr5_4:17069436-17069455 Msa0841090:CDS 35.0%
!! TGAGTTCTTGACTCTAAGAT+GGG - chr5_4:17069437-17069456 Msa0841090:CDS 35.0%
CGTTCAAGGTAAACTTAACA+AGG + chr5_4:17069608-17069627 None:intergenic 35.0%
ATTGTAAGTTCCTTCAAGGA+TGG + chr5_4:17069759-17069778 None:intergenic 35.0%
TGAGATTGTAAGTTCCTTCA+AGG + chr5_4:17069763-17069782 None:intergenic 35.0%
GTCCTAATCTAAAAAGTTGG+TGG - chr5_4:17069787-17069806 Msa0841090:CDS 35.0%
! TCCCACCAACTTTTTAGATT+AGG + chr5_4:17069792-17069811 None:intergenic 35.0%
TTGGTGGGAAAAAGACATAT+GGG - chr5_4:17069803-17069822 Msa0841090:CDS 35.0%
AAGCTAACTGAGGACAATAT+TGG + chr5_4:17069872-17069891 None:intergenic 35.0%
AGTCAAACGTAAGATCAATG+AGG - chr5_4:17069937-17069956 Msa0841090:CDS 35.0%
GTCAAACGTAAGATCAATGA+GGG - chr5_4:17069938-17069957 Msa0841090:CDS 35.0%
!! CATTGACTTCAATTTGGAGA+AGG + chr5_4:17070024-17070043 None:intergenic 35.0%
CTTCTCCAAATTGAAGTCAA+TGG - chr5_4:17070022-17070041 Msa0841090:CDS 35.0%
! AATTTGAAGTCTCTACCACA+AGG - chr5_4:17070131-17070150 Msa0841090:CDS 35.0%
GTAGGATGTTGGAGATTGAA+TGG + chr5_4:17067379-17067398 None:intergenic 40.0%
CAATCTCCAACATCCTACAA+TGG - chr5_4:17067381-17067400 Msa0841090:CDS 40.0%
TTGAGGAAAAAGAAGGCTCT+TGG + chr5_4:17067501-17067520 None:intergenic 40.0%
CTGAATGAGGAAGATGCAAA+GGG - chr5_4:17067674-17067693 Msa0841090:CDS 40.0%
TGACGATGAGCAAGTTAAAG+CGG - chr5_4:17067910-17067929 Msa0841090:CDS 40.0%
! AGCAAGTTAAAGCGGATTCT+GGG - chr5_4:17067918-17067937 Msa0841090:CDS 40.0%
! CGACGGATTCAACATCAAAT+TGG + chr5_4:17067976-17067995 None:intergenic 40.0%
GCAGAAGAAATTAAAGGAGG+AGG - chr5_4:17068087-17068106 Msa0841090:CDS 40.0%
!!! GACATGTTTTGAAGTTGCAG+GGG - chr5_4:17068179-17068198 Msa0841090:CDS 40.0%
GGCTTAATCAAGAGGAATCT+TGG - chr5_4:17068200-17068219 Msa0841090:CDS 40.0%
GCGACAATCACTATCAAAAG+AGG + chr5_4:17068343-17068362 None:intergenic 40.0%
GTGATGAAGAAGCAAAGTGA+TGG - chr5_4:17068367-17068386 Msa0841090:CDS 40.0%
ATGAAGAAGCAAAGTGATGG+CGG - chr5_4:17068370-17068389 Msa0841090:CDS 40.0%
! CAGAGAGATTGATTCAACTC+TGG - chr5_4:17068521-17068540 Msa0841090:CDS 40.0%
!!! TCCTTTGGTTTTCCATCAAG+CGG - chr5_4:17068609-17068628 Msa0841090:CDS 40.0%
GGTTAATGCATAAACTGGCA+AGG - chr5_4:17068707-17068726 Msa0841090:CDS 40.0%
ACATCACTGTGGATGTAATG+GGG - chr5_4:17068752-17068771 Msa0841090:CDS 40.0%
TTCATGTGAGATCCCTGAAT+CGG - chr5_4:17068828-17068847 Msa0841090:CDS 40.0%
GTGTTGGATCTACATGACTT+GGG - chr5_4:17068985-17069004 Msa0841090:CDS 40.0%
TGTTGGATCTACATGACTTG+GGG - chr5_4:17068986-17069005 Msa0841090:CDS 40.0%
GAAGCTTCTCCATGTTGTTA+TGG + chr5_4:17069071-17069090 None:intergenic 40.0%
ACAGTTTCAACGTTTGCAAG+TGG + chr5_4:17069116-17069135 None:intergenic 40.0%
! TGTCTTTTGGCAATTCCTTG+AGG + chr5_4:17069152-17069171 None:intergenic 40.0%
CAAGGAATTGCCAAAAGACA+TGG - chr5_4:17069152-17069171 Msa0841090:CDS 40.0%
CTCAACCATCTTGACTTAGA+GGG - chr5_4:17069189-17069208 Msa0841090:CDS 40.0%
ATCTAACTCAAATGCCGAGT+GGG - chr5_4:17069220-17069239 Msa0841090:CDS 40.0%
!! CTGAAAGTGCTATTAGTCGT+CGG - chr5_4:17069537-17069556 Msa0841090:CDS 40.0%
!! TGAAAGTGCTATTAGTCGTC+GGG - chr5_4:17069538-17069557 Msa0841090:CDS 40.0%
GGTGGGAGAAATTCACAATT+GGG + chr5_4:17069636-17069655 None:intergenic 40.0%
TGGTGGGAGAAATTCACAAT+TGG + chr5_4:17069637-17069656 None:intergenic 40.0%
TTGTGAATTTCTCCCACCAA+TGG - chr5_4:17069638-17069657 Msa0841090:CDS 40.0%
AGATTTGGAAGCTGATCCAT+TGG + chr5_4:17069657-17069676 None:intergenic 40.0%
AGTTGGAGAACCTTGAGATT+TGG + chr5_4:17069672-17069691 None:intergenic 40.0%
ATCTCAAGGTTCTCCAACTT+CGG - chr5_4:17069673-17069692 Msa0841090:CDS 40.0%
! GTTGGTGGGAAAAAGACATA+TGG - chr5_4:17069802-17069821 Msa0841090:CDS 40.0%
!! TTTTTAAGCCAACTCTCTGG+TGG + chr5_4:17070071-17070090 None:intergenic 40.0%
CTCAAAGACTTGAAACCTTG+TGG + chr5_4:17070149-17070168 None:intergenic 40.0%
AAAACTCAAGTCCCTTCCAT+GGG - chr5_4:17070307-17070326 Msa0841090:CDS 40.0%
! ATTTTCAACTCCCCATGGAA+GGG + chr5_4:17070321-17070340 None:intergenic 40.0%
ATAGGTAACCTCACTTCACT+TGG - chr5_4:17070404-17070423 Msa0841090:CDS 40.0%
TGACACCTTGGCAATAACAA+GGG + chr5_4:17070524-17070543 None:intergenic 40.0%
TTGACACCTTGGCAATAACA+AGG + chr5_4:17070525-17070544 None:intergenic 40.0%
AAGTGATCCATCAAGTCTTG+AGG + chr5_4:17070611-17070630 None:intergenic 40.0%
GGAGATTGAATGGGAAAGCA+TGG + chr5_4:17067369-17067388 None:intergenic 45.0%
GAAAAAGAAGGCTCTTGGAG+TGG + chr5_4:17067496-17067515 None:intergenic 45.0%
! GCCTTCTTTTTCCTCAACCT+TGG - chr5_4:17067504-17067523 Msa0841090:CDS 45.0%
GCCAAGGTTGAGGAAAAAGA+AGG + chr5_4:17067508-17067527 None:intergenic 45.0%
TCCTCAACCTTGGCTTCAAA+AGG - chr5_4:17067514-17067533 Msa0841090:CDS 45.0%
!!! ACCTTTTGAAGCCAAGGTTG+AGG + chr5_4:17067518-17067537 None:intergenic 45.0%
! CACCAGTACTCTCCTTTTGA+CGG + chr5_4:17067583-17067602 None:intergenic 45.0%
! AGTTTTCTTCACTTGGAGCG+TGG + chr5_4:17067633-17067652 None:intergenic 45.0%
ACTAAAACGCCTGCTGAATG+AGG - chr5_4:17067661-17067680 Msa0841090:CDS 45.0%
TTGCATCTTCCTCATTCAGC+AGG + chr5_4:17067673-17067692 None:intergenic 45.0%
GCTGAATGAGGAAGATGCAA+AGG - chr5_4:17067673-17067692 Msa0841090:CDS 45.0%
! GAGCAAGTTAAAGCGGATTC+TGG - chr5_4:17067917-17067936 Msa0841090:CDS 45.0%
ATTCAACTCTGGACTGCTGA+AGG - chr5_4:17068532-17068551 Msa0841090:CDS 45.0%
TTCAACTCTGGACTGCTGAA+GGG - chr5_4:17068533-17068552 Msa0841090:CDS 45.0%
TCCGCTTGATGGAAAACCAA+AGG + chr5_4:17068613-17068632 None:intergenic 45.0%
CACTTTCTTCTTCCGCTTGA+TGG + chr5_4:17068624-17068643 None:intergenic 45.0%
AAGAAGAAAGTGACCACCAC+CGG - chr5_4:17068632-17068651 Msa0841090:CDS 45.0%
! TGGTGACGAAAACATCACTG+TGG - chr5_4:17068741-17068760 Msa0841090:CDS 45.0%
CATCACTGTGGATGTAATGG+GGG - chr5_4:17068753-17068772 Msa0841090:CDS 45.0%
! ATCACTGTGGATGTAATGGG+GGG - chr5_4:17068754-17068773 Msa0841090:CDS 45.0%
! CTCTCAGAAAGACCGATTCA+GGG + chr5_4:17068843-17068862 None:intergenic 45.0%
GTTGTCATCTTTACCTCGTG+CGG + chr5_4:17068919-17068938 None:intergenic 45.0%
CACGCGTAGTGAATACTTGA+AGG + chr5_4:17068968-17068987 None:intergenic 45.0%
CAAGTATTCACTACGCGTGT+TGG - chr5_4:17068969-17068988 Msa0841090:CDS 45.0%
CGTGTTGGATCTACATGACT+TGG - chr5_4:17068984-17069003 Msa0841090:CDS 45.0%
GTCTCAATGTCATGTCCTCA+AGG - chr5_4:17069134-17069153 Msa0841090:CDS 45.0%
CCTCTAAGTCAAGATGGTTG+AGG + chr5_4:17069191-17069210 None:intergenic 45.0%
CCTCAACCATCTTGACTTAG+AGG - chr5_4:17069188-17069207 Msa0841090:CDS 45.0%
AGCATCCCTCTAAGTCAAGA+TGG + chr5_4:17069197-17069216 None:intergenic 45.0%
TCTTGACTTAGAGGGATGCT+TGG - chr5_4:17069197-17069216 Msa0841090:CDS 45.0%
GATCTAACTCAAATGCCGAG+TGG - chr5_4:17069219-17069238 Msa0841090:CDS 45.0%
GTGAGCTTACTTATCCCACT+CGG + chr5_4:17069237-17069256 None:intergenic 45.0%
! TAACATTCTGAGAGGCCACA+TGG - chr5_4:17069332-17069351 Msa0841090:CDS 45.0%
CCAGATGCGTAATTTCCATG+TGG + chr5_4:17069350-17069369 None:intergenic 45.0%
CCACATGGAAATTACGCATC+TGG - chr5_4:17069347-17069366 Msa0841090:CDS 45.0%
! TCTAAGATGGGATCACGATG+AGG - chr5_4:17069449-17069468 Msa0841090:CDS 45.0%
AGCACTTTCAGATTCGGATG+TGG + chr5_4:17069528-17069547 None:intergenic 45.0%
CTATTAGTCGTCGGGTACAA+TGG - chr5_4:17069546-17069565 Msa0841090:CDS 45.0%
ATGGTCGCACATTGTCTAAC+TGG - chr5_4:17069565-17069584 Msa0841090:CDS 45.0%
ACAATTGGGACAGTCGTTCA+AGG + chr5_4:17069622-17069641 None:intergenic 45.0%
TTGGAAGCTGATCCATTGGT+GGG + chr5_4:17069653-17069672 None:intergenic 45.0%
TTTGGAAGCTGATCCATTGG+TGG + chr5_4:17069654-17069673 None:intergenic 45.0%
GGATCAGCTTCCAAATCTCA+AGG - chr5_4:17069659-17069678 Msa0841090:CDS 45.0%
AAGAGTCCAATCTCCGAAGT+TGG + chr5_4:17069689-17069708 None:intergenic 45.0%
TCATCAAGACCGGGATATAG+CGG + chr5_4:17069900-17069919 None:intergenic 45.0%
AACGAGCTCATCATCAAGAC+CGG + chr5_4:17069910-17069929 None:intergenic 45.0%
!! TCTTGATGATGAGCTCGTTC+TGG - chr5_4:17069911-17069930 Msa0841090:CDS 45.0%
CTTGACATCGACAAATCCTC+CGG - chr5_4:17070212-17070231 Msa0841090:CDS 45.0%
ACAAATCCTCCGGAACTGAA+TGG - chr5_4:17070222-17070241 Msa0841090:CDS 45.0%
CAAATCCTCCGGAACTGAAT+GGG - chr5_4:17070223-17070242 Msa0841090:CDS 45.0%
! CATGGAAGGGACTTGAGTTT+TGG + chr5_4:17070308-17070327 None:intergenic 45.0%
CAAAACTCAAGTCCCTTCCA+TGG - chr5_4:17070306-17070325 Msa0841090:CDS 45.0%
AAACTCAAGTCCCTTCCATG+GGG - chr5_4:17070308-17070327 Msa0841090:CDS 45.0%
! CATTTTCAACTCCCCATGGA+AGG + chr5_4:17070322-17070341 None:intergenic 45.0%
! GTCACATTTTCAACTCCCCA+TGG + chr5_4:17070326-17070345 None:intergenic 45.0%
! ACTTCTCTGCCTGAAAGCAT+AGG - chr5_4:17070386-17070405 Msa0841090:CDS 45.0%
GTGAGGTTACCTATGCTTTC+AGG + chr5_4:17070398-17070417 None:intergenic 45.0%
! CCAGTTTTCCAAGTGAAGTG+AGG + chr5_4:17070415-17070434 None:intergenic 45.0%
CCTCACTTCACTTGGAAAAC+TGG - chr5_4:17070412-17070431 Msa0841090:CDS 45.0%
AGATTCTCTGCCTAAGGGAA+TGG - chr5_4:17070457-17070476 Msa0841090:CDS 45.0%
! AGGAGCTTTTCCATTCCCTT+AGG + chr5_4:17070470-17070489 None:intergenic 45.0%
GACACCTTGGCAATAACAAG+GGG + chr5_4:17070523-17070542 None:intergenic 45.0%
AACCAGACACAGGTGATGAT+TGG - chr5_4:17070543-17070562 Msa0841090:CDS 45.0%
GGAAACTCCTCAAGACTTGA+TGG - chr5_4:17070601-17070620 Msa0841090:CDS 45.0%
GATGGAGGATCTCCGTCAAA+AGG - chr5_4:17067568-17067587 Msa0841090:CDS 50.0%
! CTCCGTCAAAAGGAGAGTAC+TGG - chr5_4:17067578-17067597 Msa0841090:CDS 50.0%
!! CGTCAAAAGGAGAGTACTGG+TGG - chr5_4:17067581-17067600 Msa0841090:CDS 50.0%
! ATTGCTATTGTTGGGGCTCC+TGG - chr5_4:17067854-17067873 Msa0841090:CDS 50.0%
ATTGTTGGGGCTCCTGGAAT+TGG - chr5_4:17067860-17067879 Msa0841090:CDS 50.0%
AGACGCGTAACTACCACTGA+AGG - chr5_4:17067998-17068017 Msa0841090:CDS 50.0%
TACACGTAGCAACCATGTCG+CGG - chr5_4:17068141-17068160 Msa0841090:CDS 50.0%
GTTGCAGGGGCTTAATCAAG+AGG - chr5_4:17068192-17068211 Msa0841090:CDS 50.0%
! TTCGGCTTCGGATTCAGGTT+CGG + chr5_4:17068284-17068303 None:intergenic 50.0%
AATCCGAAGCCGAACCTGAA+CGG - chr5_4:17068290-17068309 Msa0841090:CDS 50.0%
AGATCGTGAGGGATTGTGGT+GGG - chr5_4:17068314-17068333 Msa0841090:CDS 50.0%
!! AAGAAGCAAAGTGATGGCGG+CGG - chr5_4:17068373-17068392 Msa0841090:CDS 50.0%
!! CGGTGGTGACGAATGGATTA+AGG - chr5_4:17068393-17068412 Msa0841090:CDS 50.0%
CTGGCAAGGCTAGTAATCAC+TGG - chr5_4:17068721-17068740 Msa0841090:CDS 50.0%
! TCACTGTGGATGTAATGGGG+GGG - chr5_4:17068755-17068774 Msa0841090:CDS 50.0%
! GCTCTCAGAAAGACCGATTC+AGG + chr5_4:17068844-17068863 None:intergenic 50.0%
GGCCAGCAAGAAACAAGTCA+CGG - chr5_4:17069284-17069303 Msa0841090:CDS 50.0%
GCCAGCAAGAAACAAGTCAC+GGG - chr5_4:17069285-17069304 Msa0841090:CDS 50.0%
!! TCCCGTGACTTGTTTCTTGC+TGG + chr5_4:17069289-17069308 None:intergenic 50.0%
AGCAAGAAACAAGTCACGGG+AGG - chr5_4:17069288-17069307 Msa0841090:CDS 50.0%
AAGATGGGATCACGATGAGG+AGG - chr5_4:17069452-17069471 Msa0841090:CDS 50.0%
GGTTCTCCAACTTCGGAGAT+TGG - chr5_4:17069680-17069699 Msa0841090:CDS 50.0%
ACGAGCTCATCATCAAGACC+GGG + chr5_4:17069909-17069928 None:intergenic 50.0%
! TGATGATGAGCTCGTTCTGG+TGG - chr5_4:17069914-17069933 Msa0841090:CDS 50.0%
ACCAATCTCCACCAGAGAGT+TGG - chr5_4:17070060-17070079 Msa0841090:CDS 50.0%
AATGGGACGGTCTGACTGAA+TGG - chr5_4:17070240-17070259 Msa0841090:CDS 50.0%
ATGGGACGGTCTGACTGAAT+GGG - chr5_4:17070241-17070260 Msa0841090:CDS 50.0%
!! ACTGCCCCTTGTTATTGCCA+AGG - chr5_4:17070516-17070535 Msa0841090:CDS 50.0%
CATCAGCATCAGCGCTCTTC+AGG + chr5_4:17067811-17067830 None:intergenic 55.0%
GGTAGTTACGCGTCTTGCGA+CGG + chr5_4:17067993-17068012 None:intergenic 55.0%
CAAGACGCGTTCACCTTCAG+TGG + chr5_4:17068014-17068033 None:intergenic 55.0%
CAGCAATGTTGTCCGCGACA+TGG + chr5_4:17068156-17068175 None:intergenic 55.0%
TCAGGTTCGGCTTCGGATTC+AGG + chr5_4:17068289-17068308 None:intergenic 55.0%
ATCCGAAGCCGAACCTGAAC+GGG - chr5_4:17068291-17068310 Msa0841090:CDS 55.0%
! CACGATCTCCCGTTCAGGTT+CGG + chr5_4:17068302-17068321 None:intergenic 55.0%
AACCTGAACGGGAGATCGTG+AGG - chr5_4:17068302-17068321 Msa0841090:CDS 55.0%
ACCTGAACGGGAGATCGTGA+GGG - chr5_4:17068303-17068322 Msa0841090:CDS 55.0%
GAGATCGTGAGGGATTGTGG+TGG - chr5_4:17068313-17068332 Msa0841090:CDS 55.0%
GATCGTGAGGGATTGTGGTG+GGG - chr5_4:17068315-17068334 Msa0841090:CDS 55.0%
TCCTCACAACACTGCAGTGC+CGG + chr5_4:17068654-17068673 None:intergenic 55.0%
ATGGGGGGGAGAGTTCATGA+CGG - chr5_4:17068769-17068788 Msa0841090:CDS 55.0%
ATGGGATCACGATGAGGAGG+AGG - chr5_4:17069455-17069474 Msa0841090:CDS 55.0%
AGCGGCATGCAAGCTAACTG+AGG + chr5_4:17069882-17069901 None:intergenic 55.0%
GCTTGCATGCCGCTATATCC+CGG - chr5_4:17069888-17069907 Msa0841090:CDS 55.0%
GCCAACTCTCTGGTGGAGAT+TGG + chr5_4:17070064-17070083 None:intergenic 55.0%
TCCTCCGGAACTGAATGGGA+CGG - chr5_4:17070227-17070246 Msa0841090:CDS 55.0%
CAGACCGTCCCATTCAGTTC+CGG + chr5_4:17070234-17070253 None:intergenic 55.0%
GACGGTCTGACTGAATGGGA+GGG - chr5_4:17070245-17070264 Msa0841090:CDS 55.0%
CCTGTGTCTGGTTGACACCT+TGG + chr5_4:17070536-17070555 None:intergenic 55.0%
! CCAAGGTGTCAACCAGACAC+AGG - chr5_4:17070533-17070552 Msa0841090:CDS 55.0%
GGCCAATCATCACCTGTGTC+TGG + chr5_4:17070548-17070567 None:intergenic 55.0%
! CTCCCGTTCAGGTTCGGCTT+CGG + chr5_4:17068296-17068315 None:intergenic 60.0%
TCCCTCACGATCTCCCGTTC+AGG + chr5_4:17068307-17068326 None:intergenic 60.0%
CGGGAGATCGTGAGGGATTG+TGG - chr5_4:17068310-17068329 Msa0841090:CDS 60.0%
!! AAGCAAAGTGATGGCGGCGG+TGG - chr5_4:17068376-17068395 Msa0841090:CDS 60.0%
! TCACAACACTGCAGTGCCGG+TGG + chr5_4:17068651-17068670 None:intergenic 60.0%
ACCGGCACTGCAGTGTTGTG+AGG - chr5_4:17068650-17068669 Msa0841090:CDS 60.0%
TTACCTCGTGCGGAAGCCGA+GGG + chr5_4:17068909-17068928 None:intergenic 60.0%
TTTACCTCGTGCGGAAGCCG+AGG + chr5_4:17068910-17068929 None:intergenic 60.0%
ACCGTCCCATTCAGTTCCGG+AGG + chr5_4:17070231-17070250 None:intergenic 60.0%
GGACGGTCTGACTGAATGGG+AGG - chr5_4:17070244-17070263 Msa0841090:CDS 60.0%
! ATGGCGGCGGTGGTGACGAA+TGG - chr5_4:17068386-17068405 Msa0841090:CDS 65.0%
!! CAACACTGCAGTGCCGGTGG+TGG + chr5_4:17068648-17068667 None:intergenic 65.0%
CAACCCTCGGCTTCCGCACG+AGG - chr5_4:17068903-17068922 Msa0841090:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 17067356 17070634 17067356 ID=Msa0841090;Name=Msa0841090
chr5_4 mRNA 17067356 17070634 17067356 ID=Msa0841090-mRNA-1;Parent=Msa0841090;Name=Msa0841090-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|1092
chr5_4 exon 17067356 17070634 17067356 ID=Msa0841090-mRNA-1:exon:7329;Parent=Msa0841090-mRNA-1
chr5_4 CDS 17067356 17070634 17067356 ID=Msa0841090-mRNA-1:cds;Parent=Msa0841090-mRNA-1
Gene Sequence

>Msa0841090

ATGGATGTAGCCATGCTTTCCCATTCAATCTCCAACATCCTACAATGGATGAATTCTTTAAAACCCCTAGCAAATAAGCTATCAAGAATTGACATCAACCAGCTTGAAAAAAATATTAGGGAGATCAATGACAAAGTCCACTCCAAGAGCCTTCTTTTTCCTCAACCTTGGCTTCAAAAGGTTAAAGAAGTACTCGTCGATTTGAATGATTTGATGGAGGATCTCCGTCAAAAGGAGAGTACTGGTGGCTTAAACGTTAAAGATCGTTTCAAAGCCACGCTCCAAGTGAAGAAAACTACAGATGAACTAAAACGCCTGCTGAATGAGGAAGATGCAAAGGGAGTAGCAGCAGCAGAAGTTAATACAGATGATAGAAGAAAGTTTGCATATGATGAGTTTGTTGCTGTTGGAAGAGAAAATGAGAAGAAAGAGATTTTAGATCAACTGCTGAACCTGAAGAGCGCTGATGCTGATGATGATGCTGCTGTTCCTGTTGTTATTGCTATTGTTGGGGCTCCTGGAATTGGAAAAACAAAACTTGCTAGTCTCGTTTGTGACGATGAGCAAGTTAAAGCGGATTCTGGGTTTCAACCTATTTGGATCAATGATCTTCATCACCAATTTGATGTTGAATCCGTCGCAAGACGCGTAACTACCACTGAAGGTGAACGCGTCTTGCTTGTTATAGATGATTTGCGAATTGAGATTGAGAATGATGATTTGAAGAAGTTGCAGAAGAAATTAAAGGAGGAGGTTGGTTGTACAAATATCGCTATATTGGTTACTACACGTAGCAACCATGTCGCGGACAACATTGCTGCAAGACATGTTTTGAAGTTGCAGGGGCTTAATCAAGAGGAATCTTGGTCATTGTTTCAGCAGATTCATGGACCAATTACTTCAACCAAAAAAGAACAAAGTAGCACCGAACCTGAATCCGAAGCCGAACCTGAACGGGAGATCGTGAGGGATTGTGGTGGGGTCCCTCTTTTGATAGTGATTGTCGCATCGGTGATGAAGAAGCAAAGTGATGGCGGCGGTGGTGACGAATGGATTAAGGAAACACTTCAAAAGCTGAAGTTTATCTATTACGACGATCTTCCCACTTATCAGAAGTTATGCTTTGCATATTGTTCATTGTTTCCAGAAGATTATTTGATTGATGCAGAGAGATTGATTCAACTCTGGACTGCTGAAGGGTTTCTCATCAATCAAGAACAGCAATTTGGTCAAGCTTGTTTCAAAGACTTTGTTCCTTTGGTTTTCCATCAAGCGGAAGAAGAAAGTGACCACCACCGGCACTGCAGTGTTGTGAGGAACAACATGAACATCTGCTTGTATAGAATGAATCGGTTAATGCATAAACTGGCAAGGCTAGTAATCACTGGTGACGAAAACATCACTGTGGATGTAATGGGGGGGAGAGTTCATGACGGAATGCTGCGAGTTTCGTTCGAATTTTCTTTAGATCTTTCATGTGAGATCCCTGAATCGGTCTTTCTGAGAGCAAAGAAACTAAGGACCATTCTTTTGCCATACAATATTAACAACCCTCGGCTTCCGCACGAGGTAAAGATGACAACATCAACTTGTGATAAGATCTTCGATACCTTCAAGTATTCACTACGCGTGTTGGATCTACATGACTTGGGGATCAAGACAGTTCCAAGCTCTATTGATGATGTGAAGTACTTGAGGTATCTAGATCTTTCCCATAACAACATGGAGAAGCTTCCTAGTTGCATAACAAATCTTATCCACTTGCAAACGTTGAAACTGTCTCAATGTCATGTCCTCAAGGAATTGCCAAAAGACATGGATGATTTGAGTTGCCTCAACCATCTTGACTTAGAGGGATGCTTGGATCTAACTCAAATGCCGAGTGGGATAAGTAAGCTCACTTCTTTGCAAACATTGTCACTTTTTGTGGCCAGCAAGAAACAAGTCACGGGAGGACTAAGATCACTCACAGATCTTAACATTCTGAGAGGCCACATGGAAATTACGCATCTGGAACAAATAAAGTTCTCTCCATCAAAAGAAGCTGCTAAAGATGATTTTTTGAAAAATAAACAACACCTTGAGTTCTTGACTCTAAGATGGGATCACGATGAGGAGGAGGAACAAAGCGATGTCGAGAAAGACAAGAAATCGCTTGAATGTCTCAAGCCACATCCGAATCTGAAAGTGCTATTAGTCGTCGGGTACAATGGTCGCACATTGTCTAACTGGCTCGAATCACTTCAATACCTTGTTAAGTTTACCTTGAACGACTGTCCCAATTGTGAATTTCTCCCACCAATGGATCAGCTTCCAAATCTCAAGGTTCTCCAACTTCGGAGATTGGACTCTTTGAAATTCATTGCAAAGAACGATCAAGATAATACACAAATATTCTTTCCATCCTTGAAGGAACTTACAATCTCAGATTGTCCTAATCTAAAAAGTTGGTGGGAAAAAGACATATGGGAAAATGATAGACCATCTTTCAGTTGCATTTCAAAGCTAAATATCCAATATTGTCCTCAGTTAGCTTGCATGCCGCTATATCCCGGTCTTGATGATGAGCTCGTTCTGGTGGAGTCAAACGTAAGATCAATGAGGGATACAATGCATTATCTCGATAGTACTGAAAGCACTGAAACTTCTAGTTCACAATCACAACCCTTCTCCAAATTGAAGTCAATGGTAATTGAGCGTATTGACCAATCTCCACCAGAGAGTTGGCTTAAAAATTTCATTTCACTTGAGGAACTTCACATTAGAGATTGTTTTAATTTGAAGTCTCTACCACAAGGTTTCAAGTCTTTGAGTTCACTGCAATCACTTTCTATTGAGAGATGTGAACAACTTGTTCTTGACATCGACAAATCCTCCGGAACTGAATGGGACGGTCTGACTGAATGGGAGGGTCTGAAAAATCTTCGTTCTCTTACATTAAGGAGTATTCCAAAACTCAAGTCCCTTCCATGGGGAGTTGAAAATGTGACCACTTTGCAAAATTTAAGGCTTTATGATTGTCATGATTTAACTTCTCTGCCTGAAAGCATAGGTAACCTCACTTCACTTGGAAAACTGGTTATTTCTGAATGCAGAAAATTAGATTCTCTGCCTAAGGGAATGGAAAAGCTCCTGTCTCTAAATACTTTGATTATTAGGGACTGCCCCTTGTTATTGCCAAGGTGTCAACCAGACACAGGTGATGATTGGCCACAAATTGCTCATATCAAAAACAAACTGGTGAAGGAAACTCCTCAAGACTTGATGGATCACTTGTGA
Protein sequence

>Msa0841090

MDVAMLSHSISNILQWMNSLKPLANKLSRIDINQLEKNIREINDKVHSKSLLFPQPWLQKVKEVLVDLNDLMEDLRQKESTGGLNVKDRFKATLQVKKTTDELKRLLNEEDAKGVAAAEVNTDDRRKFAYDEFVAVGRENEKKEILDQLLNLKSADADDDAAVPVVIAIVGAPGIGKTKLASLVCDDEQVKADSGFQPIWINDLHHQFDVESVARRVTTTEGERVLLVIDDLRIEIENDDLKKLQKKLKEEVGCTNIAILVTTRSNHVADNIAARHVLKLQGLNQEESWSLFQQIHGPITSTKKEQSSTEPESEAEPEREIVRDCGGVPLLIVIVASVMKKQSDGGGGDEWIKETLQKLKFIYYDDLPTYQKLCFAYCSLFPEDYLIDAERLIQLWTAEGFLINQEQQFGQACFKDFVPLVFHQAEEESDHHRHCSVVRNNMNICLYRMNRLMHKLARLVITGDENITVDVMGGRVHDGMLRVSFEFSLDLSCEIPESVFLRAKKLRTILLPYNINNPRLPHEVKMTTSTCDKIFDTFKYSLRVLDLHDLGIKTVPSSIDDVKYLRYLDLSHNNMEKLPSCITNLIHLQTLKLSQCHVLKELPKDMDDLSCLNHLDLEGCLDLTQMPSGISKLTSLQTLSLFVASKKQVTGGLRSLTDLNILRGHMEITHLEQIKFSPSKEAAKDDFLKNKQHLEFLTLRWDHDEEEEQSDVEKDKKSLECLKPHPNLKVLLVVGYNGRTLSNWLESLQYLVKFTLNDCPNCEFLPPMDQLPNLKVLQLRRLDSLKFIAKNDQDNTQIFFPSLKELTISDCPNLKSWWEKDIWENDRPSFSCISKLNIQYCPQLACMPLYPGLDDELVLVESNVRSMRDTMHYLDSTESTETSSSQSQPFSKLKSMVIERIDQSPPESWLKNFISLEELHIRDCFNLKSLPQGFKSLSSLQSLSIERCEQLVLDIDKSSGTEWDGLTEWEGLKNLRSLTLRSIPKLKSLPWGVENVTTLQNLRLYDCHDLTSLPESIGNLTSLGKLVISECRKLDSLPKGMEKLLSLNTLIIRDCPLLLPRCQPDTGDDWPQIAHIKNKLVKETPQDLMDHL*