Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864700 | XP_003617931.1 | 95.266 | 338 | 7 | 2 | 1 | 338 | 1 | 329 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864700 | sp|Q9SR43|PFBS_ARATH | 57.244 | 283 | 121 | 0 | 55 | 337 | 47 | 329 | 1.36e-120 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864700 | G7KEL5 | 95.266 | 338 | 7 | 2 | 1 | 338 | 1 | 329 | 0.0 | 655 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007570 | Msa0864700 | 0.802041 | 6.770364e-49 | -8.615850e-47 |
| Msa0011010 | Msa0864700 | -0.800750 | 1.244968e-48 | -8.615850e-47 |
| Msa0016380 | Msa0864700 | 0.800607 | 1.331047e-48 | -8.615850e-47 |
| Msa0025570 | Msa0864700 | -0.810645 | 1.039648e-50 | -8.615850e-47 |
| Msa0038750 | Msa0864700 | 0.825077 | 5.706389e-54 | -8.615850e-47 |
| Msa0040930 | Msa0864700 | -0.800344 | 1.506138e-48 | -8.615850e-47 |
| Msa0042210 | Msa0864700 | 0.822863 | 1.886214e-53 | -8.615850e-47 |
| Msa0047660 | Msa0864700 | 0.804637 | 1.963218e-49 | -8.615850e-47 |
| Msa0048380 | Msa0864700 | -0.813484 | 2.500881e-51 | -8.615850e-47 |
| Msa0057340 | Msa0864700 | 0.800235 | 1.584899e-48 | -8.615850e-47 |
| Msa0073110 | Msa0864700 | -0.814190 | 1.747659e-51 | -8.615850e-47 |
| Msa0078160 | Msa0864700 | 0.803930 | 2.755468e-49 | -8.615850e-47 |
| Msa0081120 | Msa0864700 | 0.808453 | 3.073989e-50 | -8.615850e-47 |
| Msa0081790 | Msa0864700 | 0.814247 | 1.698119e-51 | -8.615850e-47 |
| Msa0098380 | Msa0864700 | -0.801292 | 9.643638e-49 | -8.615850e-47 |
| Msa0117650 | Msa0864700 | -0.812654 | 3.801883e-51 | -8.615850e-47 |
| Msa0118700 | Msa0864700 | 0.805567 | 1.254531e-49 | -8.615850e-47 |
| Msa0619450 | Msa0864700 | 0.809539 | 1.800122e-50 | -8.615850e-47 |
| Msa0630910 | Msa0864700 | 0.806061 | 9.876802e-50 | -8.615850e-47 |
| Msa0659580 | Msa0864700 | 0.808395 | 3.163711e-50 | -8.615850e-47 |
| Msa0673620 | Msa0864700 | 0.803216 | 3.874535e-49 | -8.615850e-47 |
| Msa0677250 | Msa0864700 | 0.806727 | 7.148995e-50 | -8.615850e-47 |
| Msa0680460 | Msa0864700 | -0.812949 | 3.277514e-51 | -8.615850e-47 |
| Msa0684030 | Msa0864700 | 0.814523 | 1.475683e-51 | -8.615850e-47 |
| Msa0719600 | Msa0864700 | -0.837003 | 6.716895e-57 | -8.615850e-47 |
| Msa0729740 | Msa0864700 | 0.802893 | 4.520133e-49 | -8.615850e-47 |
| Msa0745270 | Msa0864700 | 0.801716 | 7.895007e-49 | -8.615850e-47 |
| Msa0784780 | Msa0864700 | 0.816932 | 4.286355e-52 | -8.615850e-47 |
| Msa0795910 | Msa0864700 | 0.800039 | 1.737324e-48 | -8.615850e-47 |
| Msa0823480 | Msa0864700 | 0.807453 | 5.018718e-50 | -8.615850e-47 |
| Msa0825490 | Msa0864700 | 0.810438 | 1.152577e-50 | -8.615850e-47 |
| Msa0829990 | Msa0864700 | -0.802376 | 5.776595e-49 | -8.615850e-47 |
| Msa0833360 | Msa0864700 | 0.806115 | 9.620800e-50 | -8.615850e-47 |
| Msa0841090 | Msa0864700 | -0.808585 | 2.880862e-50 | -8.615850e-47 |
| Msa0121320 | Msa0864700 | -0.812532 | 4.043662e-51 | -8.615850e-47 |
| Msa0140870 | Msa0864700 | 0.804490 | 2.106562e-49 | -8.615850e-47 |
| Msa0163690 | Msa0864700 | -0.808024 | 3.795310e-50 | -8.615850e-47 |
| Msa0167570 | Msa0864700 | 0.816049 | 6.755432e-52 | -8.615850e-47 |
| Msa0175240 | Msa0864700 | 0.805964 | 1.035180e-49 | -8.615850e-47 |
| Msa0185040 | Msa0864700 | -0.800338 | 1.510086e-48 | -8.615850e-47 |
| Msa0186400 | Msa0864700 | 0.804238 | 2.377576e-49 | -8.615850e-47 |
| Msa0199490 | Msa0864700 | 0.808302 | 3.311443e-50 | -8.615850e-47 |
| Msa0405200 | Msa0864700 | -0.803732 | 3.030012e-49 | -8.615850e-47 |
| Msa0457070 | Msa0864700 | 0.808379 | 3.187659e-50 | -8.615850e-47 |
| Msa0461150 | Msa0864700 | 0.801250 | 9.836701e-49 | -8.615850e-47 |
| Msa0469770 | Msa0864700 | 0.836399 | 9.573251e-57 | -8.615850e-47 |
| Msa0471130 | Msa0864700 | 0.811327 | 7.399081e-51 | -8.615850e-47 |
| Msa0282830 | Msa0864700 | -0.800637 | 1.312451e-48 | -8.615850e-47 |
| Msa0307820 | Msa0864700 | 0.800465 | 1.422989e-48 | -8.615850e-47 |
| Msa0314680 | Msa0864700 | 0.800623 | 1.321240e-48 | -8.615850e-47 |
| Msa0319340 | Msa0864700 | 0.825595 | 4.302608e-54 | -8.615850e-47 |
| Msa0354600 | Msa0864700 | -0.826524 | 2.587512e-54 | -8.615850e-47 |
| Msa0525180 | Msa0864700 | 0.806126 | 9.568542e-50 | -8.615850e-47 |
| Msa0537960 | Msa0864700 | 0.817592 | 3.043607e-52 | -8.615850e-47 |
| Msa0538020 | Msa0864700 | 0.824693 | 7.030603e-54 | -8.615850e-47 |
| Msa0565370 | Msa0864700 | 0.807688 | 4.472431e-50 | -8.615850e-47 |
| Msa0565430 | Msa0864700 | 0.810984 | 8.782185e-51 | -8.615850e-47 |
| Msa0580410 | Msa0864700 | 0.801990 | 6.937832e-49 | -8.615850e-47 |
| Msa0581350 | Msa0864700 | -0.808813 | 2.575029e-50 | -8.615850e-47 |
| Msa0588040 | Msa0864700 | -0.820504 | 6.622807e-53 | -8.615850e-47 |
| Msa0590620 | Msa0864700 | 0.804190 | 2.433045e-49 | -8.615850e-47 |
| Msa0597800 | Msa0864700 | -0.813027 | 3.150012e-51 | -8.615850e-47 |
| Msa0844870 | Msa0864700 | 0.834743 | 2.512946e-56 | -8.615850e-47 |
| Msa0844970 | Msa0864700 | 0.822900 | 1.848993e-53 | -8.615850e-47 |
| Msa0858250 | Msa0864700 | 0.812087 | 5.058410e-51 | -8.615850e-47 |
| Msa0864700 | Msa0925630 | 0.803221 | 3.866403e-49 | -8.615850e-47 |
| Msa0864700 | Msa0928060 | 0.802703 | 4.946395e-49 | -8.615850e-47 |
| Msa0864700 | Msa1005370 | -0.807217 | 5.630566e-50 | -8.615850e-47 |
| Msa0864700 | Msa1068780 | -0.802887 | 4.532504e-49 | -8.615850e-47 |
| Msa0864700 | Msa1076120 | 0.814618 | 1.405881e-51 | -8.615850e-47 |
| Msa0864700 | Msa1078120 | 0.804941 | 1.696001e-49 | -8.615850e-47 |
| Msa0864700 | Msa1103450 | -0.809158 | 2.172926e-50 | -8.615850e-47 |
| Msa0864700 | Msa1120960 | -0.802207 | 6.258806e-49 | -8.615850e-47 |
| Msa0864700 | Msa1131300 | 0.814200 | 1.738840e-51 | -8.615850e-47 |
| Msa0864700 | Msa1137750 | -0.828161 | 1.048533e-54 | -8.615850e-47 |
| Msa0864700 | Msa1154060 | -0.814773 | 1.298785e-51 | -8.615850e-47 |
| Msa0864700 | Msa1156740 | -0.809459 | 1.873008e-50 | -8.615850e-47 |
| Msa0864700 | Msa1163130 | 0.808909 | 2.457089e-50 | -8.615850e-47 |
| Msa0864700 | Msa1163230 | 0.826688 | 2.365253e-54 | -8.615850e-47 |
| Msa0864700 | Msa1191530 | 0.802907 | 4.489829e-49 | -8.615850e-47 |
| Msa0864700 | Msa1203320 | 0.800263 | 1.564456e-48 | -8.615850e-47 |
| Msa0864700 | Msa1204900 | 0.803504 | 3.377579e-49 | -8.615850e-47 |
| Msa0864700 | Msa1215540 | 0.838704 | 2.455799e-57 | -8.615850e-47 |
| Msa0864700 | Msa1221270 | -0.816451 | 5.493699e-52 | -8.615850e-47 |
| Msa0864700 | Msa1223540 | -0.824253 | 8.922462e-54 | -8.615850e-47 |
| Msa0864700 | Msa1223620 | -0.817647 | 2.958377e-52 | -8.615850e-47 |
| Msa0864700 | Msa1223710 | -0.832307 | 1.018689e-55 | -8.615850e-47 |
| Msa0864700 | Msa1223960 | -0.822890 | 1.859391e-53 | -8.615850e-47 |
| Msa0864700 | Msa1223990 | -0.829872 | 4.035952e-55 | -8.615850e-47 |
| Msa0864700 | Msa1247200 | 0.829200 | 5.881220e-55 | -8.615850e-47 |
| Msa0864700 | Msa1252210 | 0.808107 | 3.643608e-50 | -8.615850e-47 |
| Msa0864700 | Msa1256490 | 0.803835 | 2.884025e-49 | -8.615850e-47 |
| Msa0864700 | Msa1263110 | -0.814970 | 1.174518e-51 | -8.615850e-47 |
| Msa0864700 | Msa1263520 | -0.821119 | 4.783449e-53 | -8.615850e-47 |
| Msa0864700 | Msa1269200 | -0.828774 | 7.457883e-55 | -8.615850e-47 |
| Msa0864700 | Msa1269730 | 0.804828 | 1.791081e-49 | -8.615850e-47 |
| Msa0864700 | Msa1270860 | 0.809238 | 2.088460e-50 | -8.615850e-47 |
| Msa0864700 | Msa1286860 | 0.801140 | 1.036085e-48 | -8.615850e-47 |
| Msa0864700 | Msa1288380 | 0.803134 | 4.029126e-49 | -8.615850e-47 |
| Msa0864700 | Msa1295210 | 0.805193 | 1.502532e-49 | -8.615850e-47 |
| Msa0864700 | Msa1301280 | 0.822754 | 1.999674e-53 | -8.615850e-47 |
| Msa0864700 | Msa1325560 | 0.800524 | 1.384419e-48 | -8.615850e-47 |
| Msa0864700 | Msa1338810 | 0.805489 | 1.302353e-49 | -8.615850e-47 |
| Msa0864700 | Msa1344450 | -0.811592 | 6.480202e-51 | -8.615850e-47 |
| Msa0864700 | Msa1379270 | 0.812653 | 3.804667e-51 | -8.615850e-47 |
| Msa0864700 | Msa1398150 | 0.814062 | 1.865606e-51 | -8.615850e-47 |
| Msa0864700 | Msa1400290 | 0.807133 | 5.866650e-50 | -8.615850e-47 |
| Msa0864700 | Msa1403820 | 0.804290 | 2.319015e-49 | -8.615850e-47 |
| Msa0864700 | Msa1404810 | 0.834609 | 2.714921e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864700 | MtrunA17_Chr5g0447391 | 95.266 | 338 | 7 | 2 | 1 | 338 | 1 | 329 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864700 | AT3G09150.2 | 57.244 | 283 | 121 | 0 | 55 | 337 | 47 | 329 | 1.38e-121 | 353 |
| Msa0864700 | AT3G09150.1 | 56.537 | 283 | 121 | 1 | 55 | 337 | 47 | 327 | 3.66e-118 | 344 |
| Msa0864700 | AT3G09150.3 | 58.943 | 246 | 101 | 0 | 92 | 337 | 5 | 250 | 6.05e-111 | 323 |
| Msa0864700 | AT3G09150.4 | 55.310 | 226 | 101 | 0 | 55 | 280 | 47 | 272 | 1.96e-90 | 272 |
Find 79 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTTCTCTTCCCCTTTAC+AGG | 0.119282 | 5_4:+65222734 | Msa0864700:CDS |
| CAGTTACCTCAGCATATTTC+AGG | 0.226358 | 5_4:-65225358 | None:intergenic |
| CAACACAACAATGTTTGTTT+TGG | 0.283890 | 5_4:-65224908 | None:intergenic |
| GGGACATCATACTCCGCTTT+TGG | 0.286944 | 5_4:-65224856 | None:intergenic |
| GGTCGAATCAATTGACAAAT+TGG | 0.292274 | 5_4:+65226914 | Msa0864700:three_prime_UTR |
| TTAAGAAGCTTTCTCTTTAA+CGG | 0.302166 | 5_4:+65226267 | Msa0864700:CDS |
| GTATAATTCCTTGAATTCTA+AGG | 0.316064 | 5_4:+65224194 | Msa0864700:CDS |
| AAATTATGATATTCTGTATT+CGG | 0.324062 | 5_4:+65225766 | Msa0864700:CDS |
| CATTTCAAGCTGACAAGATT+AGG | 0.335439 | 5_4:+65224244 | Msa0864700:CDS |
| TTTACCATCCTTAGAATTCA+AGG | 0.336886 | 5_4:-65224202 | None:intergenic |
| AATAAGAAAGGCGGTATTGC+TGG | 0.342144 | 5_4:+65226360 | Msa0864700:CDS |
| AACAGTAAAATTTACAGAAA+TGG | 0.349858 | 5_4:+65222453 | Msa0864700:five_prime_UTR |
| ATAAAATGAAAACCTGTAAA+GGG | 0.389550 | 5_4:-65222746 | None:intergenic |
| AGAAGAAGATGGGGAGAAGA+AGG | 0.393914 | 5_4:-65222535 | None:intergenic |
| TTACTGTTACTTTACTTACT+TGG | 0.395341 | 5_4:-65222438 | None:intergenic |
| CCACGCGATTGCACTCAAAC+TGG | 0.401722 | 5_4:+65226816 | Msa0864700:three_prime_UTR |
| TAATATCATGTAATGGGTTA+AGG | 0.410294 | 5_4:-65225283 | None:intergenic |
| GATTGATAATATCATGTAAT+GGG | 0.410351 | 5_4:-65225289 | None:intergenic |
| ATAAATTCAAACTACCGTTT+CGG | 0.414541 | 5_4:-65225980 | None:intergenic |
| GTTCCAAGCAAGTTGGTAAC+TGG | 0.415040 | 5_4:-65226940 | None:intergenic |
| GCAGATAAATAATAAAATCT+AGG | 0.426151 | 5_4:+65227162 | Msa0864700:three_prime_UTR |
| TGGTTAAATTTCTTTGACTC+AGG | 0.429210 | 5_4:+65226836 | Msa0864700:three_prime_UTR |
| TTTAAAAGCTTAATTCCTCT+TGG | 0.429833 | 5_4:+65225335 | Msa0864700:CDS |
| TATGTATACAGAATTAAATT+CGG | 0.430642 | 5_4:+65227025 | Msa0864700:three_prime_UTR |
| AATAAAATGAAAACCTGTAA+AGG | 0.446441 | 5_4:-65222747 | None:intergenic |
| TCACCAGTTACCAACTTGCT+TGG | 0.447208 | 5_4:+65226937 | Msa0864700:three_prime_UTR |
| ACAAAAGAAGCTGAATTCAA+TGG | 0.451499 | 5_4:+65222491 | Msa0864700:exon |
| ATTACATGATATTATCAATC+AGG | 0.451950 | 5_4:+65225292 | Msa0864700:CDS |
| CAAAAGAAGCTGAATTCAAT+GGG | 0.455752 | 5_4:+65222492 | Msa0864700:exon |
| AGATGGGGAGAAGAAGGAAA+AGG | 0.460615 | 5_4:-65222529 | None:intergenic |
| TGATTGATAATATCATGTAA+TGG | 0.466631 | 5_4:-65225290 | None:intergenic |
| GGTTCTGCAAAGCAAATGTT+GGG | 0.467670 | 5_4:+65226857 | Msa0864700:three_prime_UTR |
| TTGAATTCTAAGGATGGTAA+AGG | 0.495204 | 5_4:+65224204 | Msa0864700:CDS |
| AGGTTCTGCAAAGCAAATGT+TGG | 0.497738 | 5_4:+65226856 | Msa0864700:three_prime_UTR |
| TTCTTCAAAACACCTTGTCC+CGG | 0.497752 | 5_4:-65226134 | None:intergenic |
| GGTCAATGAATGCTGGAGCT+TGG | 0.500242 | 5_4:+65226793 | Msa0864700:intron |
| ATTGACCTTGCAGGTATGGT+TGG | 0.504673 | 5_4:+65225870 | Msa0864700:intron |
| ATTCGACCAATCATTCATCA+TGG | 0.509878 | 5_4:-65226899 | None:intergenic |
| ATGTTGTGCTTCAAGATTGT+GGG | 0.521421 | 5_4:-65225938 | None:intergenic |
| CCTCATTACCACGGCGAGGA+AGG | 0.525362 | 5_4:+65226330 | Msa0864700:CDS |
| CCTTCCTCGCCGTGGTAATG+AGG | 0.528698 | 5_4:-65226330 | None:intergenic |
| GATGCAAGCGGAAAATTCCT+TGG | 0.538917 | 5_4:+65226408 | Msa0864700:CDS |
| GGGAAGAGAACAAGTGGGTA+TGG | 0.540097 | 5_4:-65222725 | None:intergenic |
| ATAAGAAAGGCGGTATTGCT+GGG | 0.540548 | 5_4:+65226361 | Msa0864700:CDS |
| GAAGGAACTCTAAATAAGAA+AGG | 0.549129 | 5_4:+65226348 | Msa0864700:CDS |
| TTTAACGGAGTCGATGAACT+AGG | 0.550164 | 5_4:+65226282 | Msa0864700:CDS |
| CTTTACCGTATTTCCAAAAG+CGG | 0.555905 | 5_4:+65224843 | Msa0864700:CDS |
| TATCAATCAGGATGACTACA+AGG | 0.558278 | 5_4:+65225304 | Msa0864700:CDS |
| TACATATAATACAACAAGCA+TGG | 0.564173 | 5_4:-65227008 | None:intergenic |
| GTAAAGGGGAAGAGAACAAG+TGG | 0.567701 | 5_4:-65222731 | None:intergenic |
| CTTGTGAGCTTCCCTCCCCA+TGG | 0.567732 | 5_4:-65225683 | None:intergenic |
| AACTTTGTCCAAATGACTAT+CGG | 0.570194 | 5_4:-65225728 | None:intergenic |
| AATAAAATCTAGGAAACTTG+AGG | 0.572372 | 5_4:+65227172 | Msa0864700:three_prime_UTR |
| TCTAACATGGAGAGCCGAAA+CGG | 0.572541 | 5_4:+65225966 | Msa0864700:CDS |
| CATTGAGACAGAAACAATGC+AGG | 0.572862 | 5_4:+65224284 | Msa0864700:CDS |
| TGAAACTAGGATCCGGGACA+AGG | 0.575425 | 5_4:+65226122 | Msa0864700:intron |
| AATTCCTTGAATTCTAAGGA+TGG | 0.582349 | 5_4:+65224198 | Msa0864700:CDS |
| TATGTTGTGCTTCAAGATTG+TGG | 0.585564 | 5_4:-65225939 | None:intergenic |
| TTAGAGTTCCTTCCTCGCCG+TGG | 0.597712 | 5_4:-65226338 | None:intergenic |
| AGGAGAAGTTCCAAGCAAGT+TGG | 0.601242 | 5_4:-65226947 | None:intergenic |
| CACAACATAGATATCTAACA+TGG | 0.611644 | 5_4:+65225953 | Msa0864700:CDS |
| TAAAATGAAAACCTGTAAAG+GGG | 0.613371 | 5_4:-65222745 | None:intergenic |
| AAAAGTTGGCACAAAATATG+GGG | 0.624106 | 5_4:-65224876 | None:intergenic |
| GATTGGGGACACACTTGCAA+AGG | 0.626585 | 5_4:+65226160 | Msa0864700:CDS |
| GAACAAGTGGGTATGGCGAG+AGG | 0.627450 | 5_4:-65222718 | None:intergenic |
| ACGGCAGTAAAAGAGACTGA+TGG | 0.629580 | 5_4:+65225904 | Msa0864700:CDS |
| CCAGTTTGAGTGCAATCGCG+TGG | 0.637718 | 5_4:-65226816 | None:intergenic |
| ATGGTTGGAATTGATAGCCA+CGG | 0.645627 | 5_4:+65225885 | Msa0864700:CDS |
| GGCATTCAGAGATTACTACA+AGG | 0.646161 | 5_4:+65225787 | Msa0864700:CDS |
| AATCGCCCATGGGATGCAAG+CGG | 0.651732 | 5_4:+65226396 | Msa0864700:CDS |
| TCAGCATATTTCAGGCCAAG+AGG | 0.659341 | 5_4:-65225350 | None:intergenic |
| ATCATGGAGAAAATTTGCAG+CGG | 0.659408 | 5_4:-65226883 | None:intergenic |
| TCTCAATGATCATACTACGT+AGG | 0.666289 | 5_4:-65224269 | None:intergenic |
| AGAACAGCTTCTTCTAACAG+TGG | 0.668306 | 5_4:+65222615 | Msa0864700:CDS |
| GTATACAGAATTAAATTCGG+AGG | 0.671197 | 5_4:+65227028 | Msa0864700:three_prime_UTR |
| TCTTGGCCTGAAATATGCTG+AGG | 0.671577 | 5_4:+65225352 | Msa0864700:CDS |
| ACAATAATAGTATAATACGA+AGG | 0.690488 | 5_4:-65226967 | None:intergenic |
| GGAACTCTAAATAAGAAAGG+CGG | 0.694422 | 5_4:+65226351 | Msa0864700:CDS |
| TAAAGGGGAAGAGAACAAGT+GGG | 0.738603 | 5_4:-65222730 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTATTTTTTAATAAAAAGAT+TGG | - | chr5_4:65223714-65223733 | None:intergenic | 10.0% |
| !! | CAAATTGTTATATATATTAT+TGG | + | chr5_4:65224327-65224346 | Msa0864700:intron | 10.0% |
| !! | ATTTAAATAATAATTTACCA+AGG | - | chr5_4:65226428-65226447 | None:intergenic | 10.0% |
| !!! | ACATTTTTAACTAACTTTTA+AGG | + | chr5_4:65223633-65223652 | Msa0864700:intron | 15.0% |
| !!! | CATTTTTAACTAACTTTTAA+GGG | + | chr5_4:65223634-65223653 | Msa0864700:intron | 15.0% |
| !! | TACATTATCTTATTATATGA+AGG | - | chr5_4:65224472-65224491 | None:intergenic | 15.0% |
| !! | AATAAGATAATGTAGTTTAA+CGG | + | chr5_4:65224478-65224497 | Msa0864700:intron | 15.0% |
| !! | TATTTATACATTTATACAAG+TGG | - | chr5_4:65224967-65224986 | None:intergenic | 15.0% |
| !! | AACTAAAATAAAGAATAACA+AGG | - | chr5_4:65224992-65225011 | None:intergenic | 15.0% |
| !! | TTATTACAAAAACTTATCAT+GGG | + | chr5_4:65225140-65225159 | Msa0864700:intron | 15.0% |
| !! | AAATTATGATATTCTGTATT+CGG | + | chr5_4:65225766-65225785 | Msa0864700:CDS | 15.0% |
| !! | AAACAATTCAAAATTACAAA+TGG | - | chr5_4:65226073-65226092 | None:intergenic | 15.0% |
| !! | TATGTATACAGAATTAAATT+CGG | + | chr5_4:65227025-65227044 | Msa0864700:three_prime_UTR | 15.0% |
| !! | AACAGTAAAATTTACAGAAA+TGG | + | chr5_4:65222453-65222472 | Msa0864700:five_prime_UTR | 20.0% |
| !! | ATAAAATGAAAACCTGTAAA+GGG | - | chr5_4:65222749-65222768 | None:intergenic | 20.0% |
| !! | AATAAAATGAAAACCTGTAA+AGG | - | chr5_4:65222750-65222769 | None:intergenic | 20.0% |
| !! | TATTCTTCTTCTGTATTATA+TGG | + | chr5_4:65222766-65222785 | Msa0864700:intron | 20.0% |
| !! | ATTATATGGCTTAATTTACT+TGG | + | chr5_4:65222780-65222799 | Msa0864700:intron | 20.0% |
| !! | CAAATTGAAATGTTTCATTA+GGG | + | chr5_4:65222808-65222827 | Msa0864700:intron | 20.0% |
| !! | ATCTTTATTGTAATGAGTAA+TGG | + | chr5_4:65222864-65222883 | Msa0864700:intron | 20.0% |
| !!! | TGAGTTTTTTTGTTTTGTTT+TGG | + | chr5_4:65222919-65222938 | Msa0864700:intron | 20.0% |
| !! | TCTCAGTTAAAATAAGTTTA+TGG | + | chr5_4:65223101-65223120 | Msa0864700:intron | 20.0% |
| !! | TATTAAAGTTTCTCTCATTA+AGG | - | chr5_4:65223152-65223171 | None:intergenic | 20.0% |
| !! | TCATTCATTATGAATTCTAA+TGG | - | chr5_4:65223275-65223294 | None:intergenic | 20.0% |
| !! | GTTGTTTATATAAGCTATAT+TGG | + | chr5_4:65223450-65223469 | Msa0864700:intron | 20.0% |
| !! | AGTTAGTTAAAAATGTTAGT+GGG | - | chr5_4:65223629-65223648 | None:intergenic | 20.0% |
| !! | AAGTTAGTTAAAAATGTTAG+TGG | - | chr5_4:65223630-65223649 | None:intergenic | 20.0% |
| !! | TTAATGAATATATTGGACTA+GGG | - | chr5_4:65224567-65224586 | None:intergenic | 20.0% |
| !! | TTTAATGAATATATTGGACT+AGG | - | chr5_4:65224568-65224587 | None:intergenic | 20.0% |
| !! | ACTAAAATAATAGAGAAGAA+TGG | - | chr5_4:65224776-65224795 | None:intergenic | 20.0% |
| !!! | GTTATTCTTTATTTTAGTTG+TGG | + | chr5_4:65224993-65225012 | Msa0864700:intron | 20.0% |
| !!! | AGTGATAAACTTTTATTAGA+GGG | - | chr5_4:65225121-65225140 | None:intergenic | 20.0% |
| !!! | AAGTGATAAACTTTTATTAG+AGG | - | chr5_4:65225122-65225141 | None:intergenic | 20.0% |
| !! | CTTATTACAAAAACTTATCA+TGG | + | chr5_4:65225139-65225158 | Msa0864700:intron | 20.0% |
| !!! | GATTGATAATATCATGTAAT+GGG | - | chr5_4:65225292-65225311 | None:intergenic | 20.0% |
| !!! | TGATTGATAATATCATGTAA+TGG | - | chr5_4:65225293-65225312 | None:intergenic | 20.0% |
| !! | ATTACATGATATTATCAATC+AGG | + | chr5_4:65225292-65225311 | Msa0864700:CDS | 20.0% |
| !!! | ACAGAATATCATAATTTTGT+GGG | - | chr5_4:65225763-65225782 | None:intergenic | 20.0% |
| !!! | TACAGAATATCATAATTTTG+TGG | - | chr5_4:65225764-65225783 | None:intergenic | 20.0% |
| !! | TAAAATATTATGAATTGCCA+TGG | - | chr5_4:65225828-65225847 | None:intergenic | 20.0% |
| !! | ACAATAATAGTATAATACGA+AGG | - | chr5_4:65226970-65226989 | None:intergenic | 20.0% |
| !! | GCAGATAAATAATAAAATCT+AGG | + | chr5_4:65227162-65227181 | Msa0864700:three_prime_UTR | 20.0% |
| !!! | TTACTGTTACTTTACTTACT+TGG | - | chr5_4:65222441-65222460 | None:intergenic | 25.0% |
| !!! | CAAATTTGTTGATTTTGCTT+TGG | + | chr5_4:65222689-65222708 | Msa0864700:CDS | 25.0% |
| ! | TAAAATGAAAACCTGTAAAG+GGG | - | chr5_4:65222748-65222767 | None:intergenic | 25.0% |
| ! | GCAAATTGAAATGTTTCATT+AGG | + | chr5_4:65222807-65222826 | Msa0864700:intron | 25.0% |
| ! | GTTTGGATTAAAATGATTGT+AGG | + | chr5_4:65223074-65223093 | Msa0864700:intron | 25.0% |
| ! | TATCTATATATAGATAGAGC+TGG | + | chr5_4:65223305-65223324 | Msa0864700:intron | 25.0% |
| ! | ATCTATATATAGATAGAGCT+GGG | + | chr5_4:65223306-65223325 | Msa0864700:intron | 25.0% |
| !! | TTAGTGGGTAATTAGTTTAT+TGG | - | chr5_4:65223614-65223633 | None:intergenic | 25.0% |
| ! | ATCTATACCCACTAATAATA+TGG | - | chr5_4:65224135-65224154 | None:intergenic | 25.0% |
| ! | GTATAATTCCTTGAATTCTA+AGG | + | chr5_4:65224194-65224213 | Msa0864700:CDS | 25.0% |
| ! | TAAATTACCAACGACTAAAA+GGG | - | chr5_4:65224369-65224388 | None:intergenic | 25.0% |
| ! | ATAAATTACCAACGACTAAA+AGG | - | chr5_4:65224370-65224389 | None:intergenic | 25.0% |
| ! | TCGGTAAAGAATATCAAATT+TGG | - | chr5_4:65224441-65224460 | None:intergenic | 25.0% |
| ! | ATAATAGAGAAGAATGGAAA+TGG | - | chr5_4:65224770-65224789 | None:intergenic | 25.0% |
| !! | ATATGTCTGATGTTTTTCTA+TGG | + | chr5_4:65224799-65224818 | Msa0864700:intron | 25.0% |
| ! | AAAAAGTTGGCACAAAATAT+GGG | - | chr5_4:65224880-65224899 | None:intergenic | 25.0% |
| !!! | TAATATCATGTAATGGGTTA+AGG | - | chr5_4:65225286-65225305 | None:intergenic | 25.0% |
| ! | TTTAAAAGCTTAATTCCTCT+TGG | + | chr5_4:65225335-65225354 | Msa0864700:CDS | 25.0% |
| !! | AAGATTTGTATGTTCAGTTT+TGG | + | chr5_4:65225414-65225433 | Msa0864700:intron | 25.0% |
| ! | AATATAAAAACACACGTGTA+CGG | - | chr5_4:65225595-65225614 | None:intergenic | 25.0% |
| ! | ATAAATTCAAACTACCGTTT+CGG | - | chr5_4:65225983-65226002 | None:intergenic | 25.0% |
| !! | ATCTCAAACTTTTGTCTAAT+TGG | + | chr5_4:65226001-65226020 | Msa0864700:intron | 25.0% |
| !! | TCTCAAACTTTTGTCTAATT+GGG | + | chr5_4:65226002-65226021 | Msa0864700:intron | 25.0% |
| !!! | TTTTTACGATTTCTTGTTTG+CGG | + | chr5_4:65226091-65226110 | Msa0864700:intron | 25.0% |
| !!! | AATATTTTGAAACTAGGATC+CGG | + | chr5_4:65226115-65226134 | Msa0864700:intron | 25.0% |
| !! | TTTTTGTAGAGAAACAAAAC+TGG | - | chr5_4:65226202-65226221 | None:intergenic | 25.0% |
| ! | TTAAGAAGCTTTCTCTTTAA+CGG | + | chr5_4:65226267-65226286 | Msa0864700:CDS | 25.0% |
| ! | TTTAAAGAAATTTGCCAAGA+GGG | - | chr5_4:65226471-65226490 | None:intergenic | 25.0% |
| !!! | TTTGATCTTTGGGATATTTT+AGG | + | chr5_4:65226772-65226791 | Msa0864700:intron | 25.0% |
| ! | TACATATAATACAACAAGCA+TGG | - | chr5_4:65227011-65227030 | None:intergenic | 25.0% |
| ! | AATAAAATCTAGGAAACTTG+AGG | + | chr5_4:65227172-65227191 | Msa0864700:three_prime_UTR | 25.0% |
| ACAAAAGAAGCTGAATTCAA+TGG | + | chr5_4:65222491-65222510 | Msa0864700:exon | 30.0% | |
| CAAAAGAAGCTGAATTCAAT+GGG | + | chr5_4:65222492-65222511 | Msa0864700:exon | 30.0% | |
| AAGAAGAAGAAGAAGAAGAT+GGG | - | chr5_4:65222548-65222567 | None:intergenic | 30.0% | |
| !!! | TGTTTTGGAAACTCTATATC+CGG | + | chr5_4:65222934-65222953 | Msa0864700:intron | 30.0% |
| TTTAATCCAAACTGAACCAT+GGG | - | chr5_4:65223066-65223085 | None:intergenic | 30.0% | |
| ! | TTTTAATCCAAACTGAACCA+TGG | - | chr5_4:65223067-65223086 | None:intergenic | 30.0% |
| ! | TCAAGCTCATTTTATCCTTT+CGG | - | chr5_4:65223230-65223249 | None:intergenic | 30.0% |
| TCTATATATAGATAGAGCTG+GGG | + | chr5_4:65223307-65223326 | Msa0864700:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr5_4:65223333-65223352 | None:intergenic | 30.0% | |
| !! | AAGTTTTGTGAGACTGTTTA+GGG | - | chr5_4:65223538-65223557 | None:intergenic | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+AGG | - | chr5_4:65223539-65223558 | None:intergenic | 30.0% |
| !! | CCTGTTTAGATTGGTTTATT+TGG | - | chr5_4:65223577-65223596 | None:intergenic | 30.0% |
| CCAAATAAACCAATCTAAAC+AGG | + | chr5_4:65223574-65223593 | Msa0864700:intron | 30.0% | |
| !! | AGTTTATTGGTTCTGTACTA+GGG | - | chr5_4:65223601-65223620 | None:intergenic | 30.0% |
| !! | TAGTTTATTGGTTCTGTACT+AGG | - | chr5_4:65223602-65223621 | None:intergenic | 30.0% |
| ! | CGTTATGATTATGTGTCATT+TGG | + | chr5_4:65223775-65223794 | Msa0864700:intron | 30.0% |
| CACAACAACATTATATCACT+AGG | - | chr5_4:65223804-65223823 | None:intergenic | 30.0% | |
| ! | TTGCAATAATTTTTGCCACT+AGG | + | chr5_4:65224067-65224086 | Msa0864700:intron | 30.0% |
| TTCCTCACCATATTATTAGT+GGG | + | chr5_4:65224125-65224144 | Msa0864700:intron | 30.0% | |
| ! | TCAAGGAATTATACTTTTCC+TGG | - | chr5_4:65224188-65224207 | None:intergenic | 30.0% |
| ! | AATTCCTTGAATTCTAAGGA+TGG | + | chr5_4:65224198-65224217 | Msa0864700:CDS | 30.0% |
| TTTACCATCCTTAGAATTCA+AGG | - | chr5_4:65224205-65224224 | None:intergenic | 30.0% | |
| ! | TTGAATTCTAAGGATGGTAA+AGG | + | chr5_4:65224204-65224223 | Msa0864700:CDS | 30.0% |
| !! | CTAAAAGGGTTAATTTGTTG+AGG | - | chr5_4:65224355-65224374 | None:intergenic | 30.0% |
| ! | AAATTAACCCTTTTAGTCGT+TGG | + | chr5_4:65224359-65224378 | Msa0864700:intron | 30.0% |
| !!! | ATTTTTTCTATCAGATCCTC+AGG | + | chr5_4:65224524-65224543 | Msa0864700:intron | 30.0% |
| CAAATATCTTCTCTATTCTC+CGG | + | chr5_4:65224637-65224656 | Msa0864700:intron | 30.0% | |
| !! | TGTATTTGAACTTTGAAGTC+CGG | - | chr5_4:65224659-65224678 | None:intergenic | 30.0% |
| AATAGAAATGCCAGTTAGAT+TGG | - | chr5_4:65224700-65224719 | None:intergenic | 30.0% | |
| AAAAGTTGGCACAAAATATG+GGG | - | chr5_4:65224879-65224898 | None:intergenic | 30.0% | |
| GAAAAAGTTGGCACAAAATA+TGG | - | chr5_4:65224881-65224900 | None:intergenic | 30.0% | |
| ! | CAACACAACAATGTTTGTTT+TGG | - | chr5_4:65224911-65224930 | None:intergenic | 30.0% |
| ! | AAACGAGTTTAAAGTTGCAA+AGG | - | chr5_4:65225047-65225066 | None:intergenic | 30.0% |
| TGAAAAACTCATCACTCTTA+TGG | - | chr5_4:65225511-65225530 | None:intergenic | 30.0% | |
| TAATTAGAGTTCTCTCTCAA+AGG | + | chr5_4:65225618-65225637 | Msa0864700:intron | 30.0% | |
| !!! | TTTTTTCACCGATAGTCATT+TGG | + | chr5_4:65225720-65225739 | Msa0864700:CDS | 30.0% |
| AACTTTGTCCAAATGACTAT+CGG | - | chr5_4:65225731-65225750 | None:intergenic | 30.0% | |
| CACAACATAGATATCTAACA+TGG | + | chr5_4:65225953-65225972 | Msa0864700:CDS | 30.0% | |
| ATAAACACATGCATTTCTCA+TGG | - | chr5_4:65226050-65226069 | None:intergenic | 30.0% | |
| !!! | TGCGGAAATATTTTGAAACT+AGG | + | chr5_4:65226109-65226128 | Msa0864700:intron | 30.0% |
| !!! | ATATTTTGAAACTAGGATCC+GGG | + | chr5_4:65226116-65226135 | Msa0864700:intron | 30.0% |
| ! | GATTATTTTCCTCATTACCA+CGG | + | chr5_4:65226321-65226340 | Msa0864700:CDS | 30.0% |
| GAAGGAACTCTAAATAAGAA+AGG | + | chr5_4:65226348-65226367 | Msa0864700:CDS | 30.0% | |
| TTAAAGAAATTTGCCAAGAG+GGG | - | chr5_4:65226470-65226489 | None:intergenic | 30.0% | |
| ! | CTTTAAAGAAATTTGCCAAG+AGG | - | chr5_4:65226472-65226491 | None:intergenic | 30.0% |
| TATCATGTAGCTCAATGTAT+AGG | - | chr5_4:65226625-65226644 | None:intergenic | 30.0% | |
| !! | CGATCTTTAGAATTTCAATG+CGG | + | chr5_4:65226696-65226715 | Msa0864700:intron | 30.0% |
| !! | TATTTTAGGTCAATGAATGC+TGG | + | chr5_4:65226786-65226805 | Msa0864700:intron | 30.0% |
| TGGTTAAATTTCTTTGACTC+AGG | + | chr5_4:65226836-65226855 | Msa0864700:three_prime_UTR | 30.0% | |
| ! | TTTTCTCCATGATGAATGAT+TGG | + | chr5_4:65226893-65226912 | Msa0864700:three_prime_UTR | 30.0% |
| GTATACAGAATTAAATTCGG+AGG | + | chr5_4:65227028-65227047 | Msa0864700:three_prime_UTR | 30.0% | |
| AGAAGAAGAAGAAGAAGATG+GGG | - | chr5_4:65222547-65222566 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+TGG | - | chr5_4:65222549-65222568 | None:intergenic | 35.0% | |
| ! | GAAGCTGTTCTTTTCAACAA+CGG | - | chr5_4:65222606-65222625 | None:intergenic | 35.0% |
| !! | AATGAGTAATGGCTTGTTTG+TGG | + | chr5_4:65222875-65222894 | Msa0864700:intron | 35.0% |
| !!! | AGTTTTGCTCTGGCTTTAAT+CGG | - | chr5_4:65222967-65222986 | None:intergenic | 35.0% |
| GAGATGAAGATTTATCCGAA+AGG | + | chr5_4:65223212-65223231 | Msa0864700:intron | 35.0% | |
| AAGGATAAAATGAGCTTGAG+AGG | + | chr5_4:65223231-65223250 | Msa0864700:intron | 35.0% | |
| !! | GTTTATTGGTTCTGTACTAG+GGG | - | chr5_4:65223600-65223619 | None:intergenic | 35.0% |
| TGCAATTGAAACAGAAGATC+AGG | - | chr5_4:65224098-65224117 | None:intergenic | 35.0% | |
| GTTCCTCACCATATTATTAG+TGG | + | chr5_4:65224124-65224143 | Msa0864700:intron | 35.0% | |
| TACCCACTAATAATATGGTG+AGG | - | chr5_4:65224130-65224149 | None:intergenic | 35.0% | |
| ! | TTTTCTTATGTTGTCTTGCC+AGG | + | chr5_4:65224167-65224186 | Msa0864700:intron | 35.0% |
| CATTTCAAGCTGACAAGATT+AGG | + | chr5_4:65224244-65224263 | Msa0864700:CDS | 35.0% | |
| TCTCAATGATCATACTACGT+AGG | - | chr5_4:65224272-65224291 | None:intergenic | 35.0% | |
| GTCAAACTATGAAATCACTC+TGG | - | chr5_4:65224398-65224417 | None:intergenic | 35.0% | |
| GGCAGAAATATATACAGTGA+TGG | - | chr5_4:65224420-65224439 | None:intergenic | 35.0% | |
| TTGATATTCTTTACCGACGA+AGG | + | chr5_4:65224444-65224463 | Msa0864700:intron | 35.0% | |
| TTATATGAAGGATCCTTCGT+CGG | - | chr5_4:65224460-65224479 | None:intergenic | 35.0% | |
| GTTAGATTGGAACTGGAAAT+AGG | - | chr5_4:65224687-65224706 | None:intergenic | 35.0% | |
| ATTTCCAGTTCCAATCTAAC+TGG | + | chr5_4:65224687-65224706 | Msa0864700:intron | 35.0% | |
| GAATGGAAATGGCACAATTA+AGG | - | chr5_4:65224759-65224778 | None:intergenic | 35.0% | |
| CTTTACCGTATTTCCAAAAG+CGG | + | chr5_4:65224843-65224862 | Msa0864700:CDS | 35.0% | |
| !! | ATACTCCGCTTTTGGAAATA+CGG | - | chr5_4:65224851-65224870 | None:intergenic | 35.0% |
| !!! | CACAACAATGTTTGTTTTGG+CGG | - | chr5_4:65224908-65224927 | None:intergenic | 35.0% |
| ATTAGAGGGAAAATGATGCA+TGG | - | chr5_4:65225107-65225126 | None:intergenic | 35.0% | |
| AACCTTGTATTAATGATGCC+AGG | + | chr5_4:65225258-65225277 | Msa0864700:intron | 35.0% | |
| ACCTTGTATTAATGATGCCA+GGG | + | chr5_4:65225259-65225278 | Msa0864700:intron | 35.0% | |
| TATCAATCAGGATGACTACA+AGG | + | chr5_4:65225304-65225323 | Msa0864700:CDS | 35.0% | |
| ! | ACTTTATGCAGCATTTTCCA+TGG | + | chr5_4:65225666-65225685 | Msa0864700:intron | 35.0% |
| ! | CTTTATGCAGCATTTTCCAT+GGG | + | chr5_4:65225667-65225686 | Msa0864700:intron | 35.0% |
| ! | TTTATGCAGCATTTTCCATG+GGG | + | chr5_4:65225668-65225687 | Msa0864700:intron | 35.0% |
| TTATGAATTGCCATGGTCAT+AGG | - | chr5_4:65225821-65225840 | None:intergenic | 35.0% | |
| ATGTTGTGCTTCAAGATTGT+GGG | - | chr5_4:65225941-65225960 | None:intergenic | 35.0% | |
| TATGTTGTGCTTCAAGATTG+TGG | - | chr5_4:65225942-65225961 | None:intergenic | 35.0% | |
| ! | CTAATTGGGAGTCTTATGAT+TGG | + | chr5_4:65226016-65226035 | Msa0864700:intron | 35.0% |
| !!! | GTGTTTTGAAGAAGCTGATT+GGG | + | chr5_4:65226144-65226163 | Msa0864700:CDS | 35.0% |
| !!! | TGTTTTGAAGAAGCTGATTG+GGG | + | chr5_4:65226145-65226164 | Msa0864700:CDS | 35.0% |
| GCAGTATAAAACAGAAAGTG+AGG | - | chr5_4:65226239-65226258 | None:intergenic | 35.0% | |
| ! | CACTTTCTGTTTTATACTGC+AGG | + | chr5_4:65226239-65226258 | Msa0864700:intron | 35.0% |
| GGAACTCTAAATAAGAAAGG+CGG | + | chr5_4:65226351-65226370 | Msa0864700:CDS | 35.0% | |
| ! | CTGTCAGTTTTTCTGTTTTC+TGG | - | chr5_4:65226595-65226614 | None:intergenic | 35.0% |
| !! | CTTTAGAATTTCAATGCGGT+CGG | + | chr5_4:65226700-65226719 | Msa0864700:intron | 35.0% |
| GGCATTAATCTTGAGCTAAA+AGG | + | chr5_4:65226721-65226740 | Msa0864700:intron | 35.0% | |
| ATCATGGAGAAAATTTGCAG+CGG | - | chr5_4:65226886-65226905 | None:intergenic | 35.0% | |
| ATTCGACCAATCATTCATCA+TGG | - | chr5_4:65226902-65226921 | None:intergenic | 35.0% | |
| GGTCGAATCAATTGACAAAT+TGG | + | chr5_4:65226914-65226933 | Msa0864700:three_prime_UTR | 35.0% | |
| AGAACAGCTTCTTCTAACAG+TGG | + | chr5_4:65222615-65222634 | Msa0864700:CDS | 40.0% | |
| TAAAGGGGAAGAGAACAAGT+GGG | - | chr5_4:65222733-65222752 | None:intergenic | 40.0% | |
| AGCCAGAGCAAAACTTTGTA+TGG | + | chr5_4:65222972-65222991 | Msa0864700:intron | 40.0% | |
| ! | GTCCATACAAAGTTTTGCTC+TGG | - | chr5_4:65222977-65222996 | None:intergenic | 40.0% |
| ! | AACTTTGTATGGACTAACCG+AGG | + | chr5_4:65222983-65223002 | Msa0864700:intron | 40.0% |
| ! | ACTTTGTATGGACTAACCGA+GGG | + | chr5_4:65222984-65223003 | Msa0864700:intron | 40.0% |
| ! | CCAAAGTACTAAGCCTTCAT+CGG | + | chr5_4:65223035-65223054 | Msa0864700:intron | 40.0% |
| ! | CAAAGTACTAAGCCTTCATC+GGG | + | chr5_4:65223036-65223055 | Msa0864700:intron | 40.0% |
| AGTACATCACATCCTCAACA+CGG | - | chr5_4:65223830-65223849 | None:intergenic | 40.0% | |
| TCGGAACAATTATGTCTGTC+AGG | + | chr5_4:65223875-65223894 | Msa0864700:intron | 40.0% | |
| CATTGAGACAGAAACAATGC+AGG | + | chr5_4:65224284-65224303 | Msa0864700:CDS | 40.0% | |
| AATGCCAGTTAGATTGGAAC+TGG | - | chr5_4:65224694-65224713 | None:intergenic | 40.0% | |
| GGCACAATTAAGGATGGAAA+TGG | - | chr5_4:65224749-65224768 | None:intergenic | 40.0% | |
| GGAAATGGCACAATTAAGGA+TGG | - | chr5_4:65224755-65224774 | None:intergenic | 40.0% | |
| TTTGGCGGTTGAGAAAAAGT+TGG | - | chr5_4:65224893-65224912 | None:intergenic | 40.0% | |
| !! | CAAGTGGATTGCAGTAACTA+GGG | - | chr5_4:65224951-65224970 | None:intergenic | 40.0% |
| !! | ACAAGTGGATTGCAGTAACT+AGG | - | chr5_4:65224952-65224971 | None:intergenic | 40.0% |
| AGTTTCTGTATGCAGAAAGG+TGG | - | chr5_4:65225075-65225094 | None:intergenic | 40.0% | |
| ACCTTTCTGCATACAGAAAC+TGG | + | chr5_4:65225074-65225093 | Msa0864700:intron | 40.0% | |
| ACCAGTTTCTGTATGCAGAA+AGG | - | chr5_4:65225078-65225097 | None:intergenic | 40.0% | |
| TCCCTGGCATCATTAATACA+AGG | - | chr5_4:65225263-65225282 | None:intergenic | 40.0% | |
| CAGTTACCTCAGCATATTTC+AGG | - | chr5_4:65225361-65225380 | None:intergenic | 40.0% | |
| TGAGGACATTGAAGAACTAG+TGG | - | chr5_4:65225564-65225583 | None:intergenic | 40.0% | |
| GGCATTCAGAGATTACTACA+AGG | + | chr5_4:65225787-65225806 | Msa0864700:CDS | 40.0% | |
| GGTATTAGTTCCTATGACCA+TGG | + | chr5_4:65225808-65225827 | Msa0864700:intron | 40.0% | |
| ACTCTAACAATTGACCTTGC+AGG | + | chr5_4:65225861-65225880 | Msa0864700:intron | 40.0% | |
| AACAATTGACCTTGCAGGTA+TGG | + | chr5_4:65225866-65225885 | Msa0864700:intron | 40.0% | |
| ! | ATGGTTGGAATTGATAGCCA+CGG | + | chr5_4:65225885-65225904 | Msa0864700:CDS | 40.0% |
| ! | GAGTCTTATGATTGGTGATC+TGG | + | chr5_4:65226024-65226043 | Msa0864700:intron | 40.0% |
| TTCTTCAAAACACCTTGTCC+CGG | - | chr5_4:65226137-65226156 | None:intergenic | 40.0% | |
| !!! | GGTGTTTTGAAGAAGCTGAT+TGG | + | chr5_4:65226143-65226162 | Msa0864700:CDS | 40.0% |
| GCAAAGGTAGACTGAATTTG+AGG | + | chr5_4:65226176-65226195 | Msa0864700:intron | 40.0% | |
| TTTAACGGAGTCGATGAACT+AGG | + | chr5_4:65226282-65226301 | Msa0864700:CDS | 40.0% | |
| AATAAGAAAGGCGGTATTGC+TGG | + | chr5_4:65226360-65226379 | Msa0864700:CDS | 40.0% | |
| ATAAGAAAGGCGGTATTGCT+GGG | + | chr5_4:65226361-65226380 | Msa0864700:CDS | 40.0% | |
| !! | AGTCTTTTGAAAATCGCCCA+TGG | + | chr5_4:65226385-65226404 | Msa0864700:CDS | 40.0% |
| !! | GTCTTTTGAAAATCGCCCAT+GGG | + | chr5_4:65226386-65226405 | Msa0864700:CDS | 40.0% |
| !! | TTTCTGGTTAGTTACAGCAG+TGG | - | chr5_4:65226579-65226598 | None:intergenic | 40.0% |
| AATCTTGAGCTAAAAGGCCA+AGG | + | chr5_4:65226727-65226746 | Msa0864700:intron | 40.0% | |
| !! | TGGTGCTGACATTTGATCTT+TGG | + | chr5_4:65226761-65226780 | Msa0864700:intron | 40.0% |
| !! | GGTGCTGACATTTGATCTTT+GGG | + | chr5_4:65226762-65226781 | Msa0864700:intron | 40.0% |
| AGGTTCTGCAAAGCAAATGT+TGG | + | chr5_4:65226856-65226875 | Msa0864700:three_prime_UTR | 40.0% | |
| GGTTCTGCAAAGCAAATGTT+GGG | + | chr5_4:65226857-65226876 | Msa0864700:three_prime_UTR | 40.0% | |
| AGATGGGGAGAAGAAGGAAA+AGG | - | chr5_4:65222532-65222551 | None:intergenic | 45.0% | |
| AGAAGAAGATGGGGAGAAGA+AGG | - | chr5_4:65222538-65222557 | None:intergenic | 45.0% | |
| ! | GCTGTTCTTTTCAACAACGG+TGG | - | chr5_4:65222603-65222622 | None:intergenic | 45.0% |
| GTAAAGGGGAAGAGAACAAG+TGG | - | chr5_4:65222734-65222753 | None:intergenic | 45.0% | |
| CTTGTTCTCTTCCCCTTTAC+AGG | + | chr5_4:65222734-65222753 | Msa0864700:CDS | 45.0% | |
| GGAAACTCTATATCCGGTCT+AGG | + | chr5_4:65222940-65222959 | Msa0864700:intron | 45.0% | |
| ! | CTTTGTATGGACTAACCGAG+GGG | + | chr5_4:65222985-65223004 | Msa0864700:intron | 45.0% |
| TCAAGGTCTCATAATCCCCT+CGG | - | chr5_4:65223003-65223022 | None:intergenic | 45.0% | |
| ! | TTTGGAGTGTTCTCCTCTCA+AGG | - | chr5_4:65223020-65223039 | None:intergenic | 45.0% |
| CCGATGAAGGCTTAGTACTT+TGG | - | chr5_4:65223038-65223057 | None:intergenic | 45.0% | |
| ATCCAAACTGAACCATGGGT+TGG | - | chr5_4:65223062-65223081 | None:intergenic | 45.0% | |
| TACTAGGGGCCTGTTTAGAT+TGG | - | chr5_4:65223586-65223605 | None:intergenic | 45.0% | |
| GTTGTTGTGTTTCCGTGTTG+AGG | + | chr5_4:65223815-65223834 | Msa0864700:intron | 45.0% | |
| CTCTTCAAGCTTCTGCTACT+CGG | + | chr5_4:65223856-65223875 | Msa0864700:intron | 45.0% | |
| TGTCAACATTACACGTCCTG+AGG | - | chr5_4:65224543-65224562 | None:intergenic | 45.0% | |
| TTTCTATGGACTCTTCGTGC+AGG | + | chr5_4:65224813-65224832 | Msa0864700:intron | 45.0% | |
| !! | ATGTAATGGGTTAAGGTCCC+TGG | - | chr5_4:65225279-65225298 | None:intergenic | 45.0% |
| TCAGCATATTTCAGGCCAAG+AGG | - | chr5_4:65225353-65225372 | None:intergenic | 45.0% | |
| TCTTGGCCTGAAATATGCTG+AGG | + | chr5_4:65225352-65225371 | Msa0864700:CDS | 45.0% | |
| ATTGACCTTGCAGGTATGGT+TGG | + | chr5_4:65225870-65225889 | Msa0864700:intron | 45.0% | |
| CAATTCCAACCATACCTGCA+AGG | - | chr5_4:65225878-65225897 | None:intergenic | 45.0% | |
| ! | ATCAGTCTCTTTTACTGCCG+TGG | - | chr5_4:65225905-65225924 | None:intergenic | 45.0% |
| ACGGCAGTAAAAGAGACTGA+TGG | + | chr5_4:65225904-65225923 | Msa0864700:CDS | 45.0% | |
| TCTAACATGGAGAGCCGAAA+CGG | + | chr5_4:65225966-65225985 | Msa0864700:CDS | 45.0% | |
| ! | ATTTTCCGCTTGCATCCCAT+GGG | - | chr5_4:65226404-65226423 | None:intergenic | 45.0% |
| ! | AATTTTCCGCTTGCATCCCA+TGG | - | chr5_4:65226405-65226424 | None:intergenic | 45.0% |
| GATGCAAGCGGAAAATTCCT+TGG | + | chr5_4:65226408-65226427 | Msa0864700:CDS | 45.0% | |
| TATAATTGCTCCTCCCCTCT+TGG | + | chr5_4:65226454-65226473 | Msa0864700:intron | 45.0% | |
| AAGAAATTTGCCAAGAGGGG+AGG | - | chr5_4:65226467-65226486 | None:intergenic | 45.0% | |
| AGGCCAAGGTCTACTTAATG+TGG | + | chr5_4:65226741-65226760 | Msa0864700:intron | 45.0% | |
| GCACCACATTAAGTAGACCT+TGG | - | chr5_4:65226747-65226766 | None:intergenic | 45.0% | |
| ! | TCACCAGTTACCAACTTGCT+TGG | + | chr5_4:65226937-65226956 | Msa0864700:three_prime_UTR | 45.0% |
| !! | GTTCCAAGCAAGTTGGTAAC+TGG | - | chr5_4:65226943-65226962 | None:intergenic | 45.0% |
| AGGAGAAGTTCCAAGCAAGT+TGG | - | chr5_4:65226950-65226969 | None:intergenic | 45.0% | |
| !!! | ATTAAAAAATAGTTTTTATA+TGG | + | chr5_4:65223722-65223741 | Msa0864700:intron | 5.0% |
| !! | AATTAAACTAAATTTAAATA+TGG | - | chr5_4:65224017-65224036 | None:intergenic | 5.0% |
| !!! | AATATTTTTAATGAATATAT+TGG | - | chr5_4:65224574-65224593 | None:intergenic | 5.0% |
| GGGAAGAGAACAAGTGGGTA+TGG | - | chr5_4:65222728-65222747 | None:intergenic | 50.0% | |
| ! | GGCTTTAATCGGTCCTAGAC+CGG | - | chr5_4:65222956-65222975 | None:intergenic | 50.0% |
| GGGGATTATGAGACCTTGAG+AGG | + | chr5_4:65223004-65223023 | Msa0864700:intron | 50.0% | |
| ACTAACTCCCAAGAGAGCAG+TGG | + | chr5_4:65223664-65223683 | Msa0864700:intron | 50.0% | |
| CTAACTCCCAAGAGAGCAGT+GGG | + | chr5_4:65223665-65223684 | Msa0864700:intron | 50.0% | |
| TACCAACCCACTGCTCTCTT+GGG | - | chr5_4:65223674-65223693 | None:intergenic | 50.0% | |
| TTACCAACCCACTGCTCTCT+TGG | - | chr5_4:65223675-65223694 | None:intergenic | 50.0% | |
| !! | GAAGATCAGGAAGTGCCTAG+TGG | - | chr5_4:65224085-65224104 | None:intergenic | 50.0% |
| ! | GGGACATCATACTCCGCTTT+TGG | - | chr5_4:65224859-65224878 | None:intergenic | 50.0% |
| ACGTGTACGGTGTATGCATG+AGG | - | chr5_4:65225582-65225601 | None:intergenic | 50.0% | |
| ! | ATGCAGCATTTTCCATGGGG+AGG | + | chr5_4:65225671-65225690 | Msa0864700:intron | 50.0% |
| ! | TGCAGCATTTTCCATGGGGA+GGG | + | chr5_4:65225672-65225691 | Msa0864700:intron | 50.0% |
| TGAAACTAGGATCCGGGACA+AGG | + | chr5_4:65226122-65226141 | Msa0864700:intron | 50.0% | |
| GATTGGGGACACACTTGCAA+AGG | + | chr5_4:65226160-65226179 | Msa0864700:CDS | 50.0% | |
| ! | TTTTCCTCATTACCACGGCG+AGG | + | chr5_4:65226326-65226345 | Msa0864700:CDS | 50.0% |
| ! | TGGTTAGTTACAGCAGTGGC+AGG | - | chr5_4:65226575-65226594 | None:intergenic | 50.0% |
| GGTCAATGAATGCTGGAGCT+TGG | + | chr5_4:65226793-65226812 | Msa0864700:intron | 50.0% | |
| !! | CGTCTGCAGCTGTTTTGTGT+TGG | + | chr5_4:65227132-65227151 | Msa0864700:three_prime_UTR | 50.0% |
| GAACAAGTGGGTATGGCGAG+AGG | - | chr5_4:65222721-65222740 | None:intergenic | 55.0% | |
| GGCCAACCCATGGTTCAGTT+TGG | + | chr5_4:65223057-65223076 | Msa0864700:intron | 55.0% | |
| AGATAGAGCTGGGGCCTGTT+TGG | + | chr5_4:65223316-65223335 | Msa0864700:intron | 55.0% | |
| TTAGAGTTCCTTCCTCGCCG+TGG | - | chr5_4:65226341-65226360 | None:intergenic | 55.0% | |
| AATCGCCCATGGGATGCAAG+CGG | + | chr5_4:65226396-65226415 | Msa0864700:CDS | 55.0% | |
| CCAGTTTGAGTGCAATCGCG+TGG | - | chr5_4:65226819-65226838 | None:intergenic | 55.0% | |
| CCACGCGATTGCACTCAAAC+TGG | + | chr5_4:65226816-65226835 | Msa0864700:three_prime_UTR | 55.0% | |
| !! | ACCATGGGTTGGCCCGATGA+AGG | - | chr5_4:65223051-65223070 | None:intergenic | 60.0% |
| CTCCCAAGAGAGCAGTGGGT+TGG | + | chr5_4:65223669-65223688 | Msa0864700:intron | 60.0% | |
| CTTGTGAGCTTCCCTCCCCA+TGG | - | chr5_4:65225686-65225705 | None:intergenic | 60.0% | |
| ! | CCTTCCTCGCCGTGGTAATG+AGG | - | chr5_4:65226333-65226352 | None:intergenic | 60.0% |
| CCTCATTACCACGGCGAGGA+AGG | + | chr5_4:65226330-65226349 | Msa0864700:CDS | 60.0% | |
| GCCTTCATCGGGCCAACCCA+TGG | + | chr5_4:65223047-65223066 | Msa0864700:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 65222413 | 65227199 | 65222413 | ID=Msa0864700;Name=Msa0864700 |
| chr5_4 | mRNA | 65222413 | 65227199 | 65222413 | ID=Msa0864700-mRNA-1;Parent=Msa0864700;Name=Msa0864700-mRNA-1;_AED=0.09;_eAED=0.09;_QI=97|1|1|1|0.62|0.77|9|398|338 |
| chr5_4 | exon | 65222413 | 65222755 | 65222413 | ID=Msa0864700-mRNA-1:exon:20568;Parent=Msa0864700-mRNA-1 |
| chr5_4 | exon | 65224189 | 65224305 | 65224189 | ID=Msa0864700-mRNA-1:exon:20569;Parent=Msa0864700-mRNA-1 |
| chr5_4 | exon | 65224835 | 65224929 | 65224835 | ID=Msa0864700-mRNA-1:exon:20570;Parent=Msa0864700-mRNA-1 |
| chr5_4 | exon | 65225280 | 65225373 | 65225280 | ID=Msa0864700-mRNA-1:exon:20571;Parent=Msa0864700-mRNA-1 |
| chr5_4 | exon | 65225677 | 65225808 | 65225677 | ID=Msa0864700-mRNA-1:exon:20572;Parent=Msa0864700-mRNA-1 |
| chr5_4 | exon | 65225883 | 65225987 | 65225883 | ID=Msa0864700-mRNA-1:exon:20573;Parent=Msa0864700-mRNA-1 |
| chr5_4 | exon | 65226131 | 65226181 | 65226131 | ID=Msa0864700-mRNA-1:exon:20574;Parent=Msa0864700-mRNA-1 |
| chr5_4 | exon | 65226261 | 65226429 | 65226261 | ID=Msa0864700-mRNA-1:exon:20575;Parent=Msa0864700-mRNA-1 |
| chr5_4 | exon | 65226794 | 65227199 | 65226794 | ID=Msa0864700-mRNA-1:exon:20576;Parent=Msa0864700-mRNA-1 |
| chr5_4 | five_prime_UTR | 65222413 | 65222509 | 65222413 | ID=Msa0864700-mRNA-1:five_prime_utr;Parent=Msa0864700-mRNA-1 |
| chr5_4 | CDS | 65222510 | 65222755 | 65222510 | ID=Msa0864700-mRNA-1:cds;Parent=Msa0864700-mRNA-1 |
| chr5_4 | CDS | 65224189 | 65224305 | 65224189 | ID=Msa0864700-mRNA-1:cds;Parent=Msa0864700-mRNA-1 |
| chr5_4 | CDS | 65224835 | 65224929 | 65224835 | ID=Msa0864700-mRNA-1:cds;Parent=Msa0864700-mRNA-1 |
| chr5_4 | CDS | 65225280 | 65225373 | 65225280 | ID=Msa0864700-mRNA-1:cds;Parent=Msa0864700-mRNA-1 |
| chr5_4 | CDS | 65225677 | 65225808 | 65225677 | ID=Msa0864700-mRNA-1:cds;Parent=Msa0864700-mRNA-1 |
| chr5_4 | CDS | 65225883 | 65225987 | 65225883 | ID=Msa0864700-mRNA-1:cds;Parent=Msa0864700-mRNA-1 |
| chr5_4 | CDS | 65226131 | 65226181 | 65226131 | ID=Msa0864700-mRNA-1:cds;Parent=Msa0864700-mRNA-1 |
| chr5_4 | CDS | 65226261 | 65226429 | 65226261 | ID=Msa0864700-mRNA-1:cds;Parent=Msa0864700-mRNA-1 |
| chr5_4 | CDS | 65226794 | 65226801 | 65226794 | ID=Msa0864700-mRNA-1:cds;Parent=Msa0864700-mRNA-1 |
| chr5_4 | three_prime_UTR | 65226802 | 65227199 | 65226802 | ID=Msa0864700-mRNA-1:three_prime_utr;Parent=Msa0864700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
