AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1436400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1436400 MtrunA17_Chr3g0101241 91.709 796 64 2 1 796 10 803 0.0 1501
Msa1436400 MtrunA17_Chr3g0101271 91.709 796 64 2 1 796 10 803 0.0 1501
Msa1436400 MtrunA17_Chr3g0101201 63.570 818 263 14 1 796 33 837 0.0 952
Msa1436400 MtrunA17_Chr3g0101231 63.990 822 263 16 1 796 31 845 0.0 948
Msa1436400 MtrunA17_Chr3g0101181 62.954 826 269 13 1 796 33 851 0.0 943
Msa1436400 MtrunA17_Chr3g0101221 60.562 819 297 11 1 796 25 840 0.0 925
Msa1436400 MtrunA17_Chr3g0101251 59.780 818 263 12 1 796 26 799 0.0 877
Msa1436400 MtrunA17_Chr3g0112511 54.914 814 333 13 1 796 23 820 0.0 818
Msa1436400 MtrunA17_Chr3g0101321 54.110 815 340 11 1 796 23 822 0.0 799
Msa1436400 MtrunA17_Chr1g0189351 52.221 833 350 15 1 796 23 844 0.0 787
Msa1436400 MtrunA17_Chr3g0101331 51.325 830 366 16 1 796 23 848 0.0 767
Msa1436400 MtrunA17_Chr3g0100961 50.798 815 370 12 1 796 23 825 0.0 765
Msa1436400 MtrunA17_Chr3g0101011 52.347 831 351 20 1 796 31 851 0.0 753
Msa1436400 MtrunA17_Chr3g0100831 50.061 817 372 13 1 796 23 824 0.0 743
Msa1436400 MtrunA17_Chr3g0100801 47.940 801 362 8 1 796 20 770 0.0 716
Msa1436400 MtrunA17_Chr3g0100851 51.377 726 322 8 80 796 1 704 0.0 694
Msa1436400 MtrunA17_Chr3g0100971 50.975 718 330 9 1 703 23 733 0.0 682
Msa1436400 MtrunA17_Chr3g0100761 50.140 712 305 8 1 703 23 693 0.0 653
Msa1436400 MtrunA17_Chr3g0080741 42.771 830 425 12 1 793 23 839 0.0 620
Msa1436400 MtrunA17_Chr1g0151481 43.149 832 416 16 1 792 23 837 0.0 598
Msa1436400 MtrunA17_Chr3g0094301 42.238 831 432 12 1 796 23 840 0.0 585
Msa1436400 MtrunA17_Chr7g0229761 42.238 831 432 12 1 796 23 840 0.0 585
Msa1436400 MtrunA17_Chr3g0080601 41.978 829 436 10 1 796 23 839 0.0 584
Msa1436400 MtrunA17_Chr3g0080791 43.321 831 422 14 1 796 23 839 0.0 580
Msa1436400 MtrunA17_Chr3g0080771 41.757 831 435 13 1 796 23 839 0.0 577
Msa1436400 MtrunA17_Chr3g0081341 40.992 827 447 10 1 796 87 903 0.0 576
Msa1436400 MtrunA17_Chr3g0100681 52.551 588 266 6 158 738 1 582 0.0 562
Msa1436400 MtrunA17_Chr3g0081391 40.610 820 452 10 5 796 27 839 0.0 558
Msa1436400 MtrunA17_Chr3g0080751 40.385 832 447 13 1 796 23 841 0.0 557
Msa1436400 MtrunA17_Chr3g0081361 39.784 832 448 11 1 796 31 845 0.0 556
Msa1436400 MtrunA17_Chr3g0100731 51.273 589 274 6 216 796 1 584 0.0 543
Msa1436400 MtrunA17_Chr3g0101211 65.770 409 129 4 174 578 2 403 0.0 528
Msa1436400 MtrunA17_Chr3g0081211 41.184 828 443 12 1 796 23 838 1.62e-180 542
Msa1436400 MtrunA17_Chr3g0081191 40.242 825 450 11 2 796 24 835 2.54e-180 541
Msa1436400 MtrunA17_Chr3g0080731 39.782 827 452 11 1 793 23 837 1.31e-179 540
Msa1436400 MtrunA17_Chr3g0080631 39.273 825 414 15 1 793 23 792 4.10e-178 535
Msa1436400 MtrunA17_Chr3g0081371 39.204 829 457 13 1 796 31 845 2.71e-173 524
Msa1436400 MtrunA17_Chr3g0101391 50.951 526 234 8 289 796 1 520 1.66e-163 486
Msa1436400 MtrunA17_Chr3g0081181 38.983 826 449 12 1 796 23 823 3.57e-162 494
Msa1436400 MtrunA17_Chr5g0410001 34.793 822 491 19 1 796 22 824 1.38e-142 444
Msa1436400 MtrunA17_Chr5g0410031 34.096 830 490 18 1 796 23 829 1.45e-136 428
Msa1436400 MtrunA17_Chr3g0080721 41.197 585 314 9 232 796 2 576 3.07e-136 419
Msa1436400 MtrunA17_Chr3g0101361 60.914 394 123 7 431 796 295 685 1.91e-135 420
Msa1436400 MtrunA17_Chr3g0101361 59.041 271 95 6 1 259 33 299 7.85e-83 280
Msa1436400 MtrunA17_Chr5g0410021 35.145 828 474 19 3 796 25 823 1.50e-134 422
Msa1436400 MtrunA17_Chr3g0084351 41.429 560 303 8 51 593 3 554 1.13e-133 408
Msa1436400 MtrunA17_Chr1g0189271 58.696 322 129 2 135 452 2 323 1.12e-129 389
Msa1436400 MtrunA17_Chr5g0409991 33.772 835 474 19 3 796 25 821 3.66e-128 405
Msa1436400 MtrunA17_Chr5g0409971 34.058 828 486 18 3 796 25 826 3.57e-125 398
Msa1436400 MtrunA17_Chr3g0100781 51.841 353 158 6 1 344 23 372 1.84e-115 354
Msa1436400 MtrunA17_Chr1g0149071 39.065 599 210 12 203 796 1 449 3.31e-108 338
Msa1436400 MtrunA17_Chr3g0080651 41.571 522 278 9 290 793 240 752 2.01e-107 348
Msa1436400 MtrunA17_Chr3g0080651 39.512 205 104 4 1 190 26 225 2.48e-29 125
Msa1436400 MtrunA17_Chr5g0444301 50.253 396 183 5 410 796 1 391 1.61e-101 321
Msa1436400 MtrunA17_Chr3g0100791 48.370 368 182 3 432 796 1 363 6.91e-99 314
Msa1436400 MtrunA17_Chr3g0100701 50.394 381 175 7 420 796 284 654 8.89e-99 323
Msa1436400 MtrunA17_Chr3g0100701 48.302 265 119 6 1 252 23 282 4.83e-69 242
Msa1436400 MtrunA17_Chr3g0101341 59.926 272 85 4 1 252 1 268 1.41e-92 291
Msa1436400 MtrunA17_Chr5g0404741 29.769 823 520 17 9 796 28 827 8.94e-92 308
Msa1436400 MtrunA17_Chr1g0189281 49.544 329 148 8 480 796 2 324 9.52e-82 266
Msa1436400 MtrunA17_Chr4g0037421 28.439 756 464 23 1 705 60 789 1.14e-77 270
Msa1436400 MtrunA17_Chr2g0299001 28.638 852 519 28 1 796 23 841 2.05e-74 260
Msa1436400 MtrunA17_Chr3g0101421 46.992 266 127 5 1 254 23 286 1.28e-71 236
Msa1436400 MtrunA17_Chr7g0219851 27.414 839 510 25 4 775 28 834 6.15e-68 242
Msa1436400 MtrunA17_Chr3g0101351 61.463 205 65 3 1 195 35 235 5.89e-65 218
Msa1436400 MtrunA17_Chr3g0096971 61.714 175 63 2 235 405 1 175 5.76e-63 209
Msa1436400 MtrunA17_Chr1g0189321 50.638 235 103 4 386 614 14 241 3.68e-62 209
Msa1436400 MtrunA17_Chr8g0352831 27.204 794 464 32 29 752 55 804 1.32e-59 219
Msa1436400 MtrunA17_Chr4g0010261 30.717 586 334 16 133 680 151 702 9.77e-57 210
Msa1436400 MtrunA17_Chr3g0085501 29.167 696 419 26 139 793 168 830 1.27e-56 211
Msa1436400 MtrunA17_Chr3g0082871 29.107 560 351 17 133 675 150 680 1.58e-56 206
Msa1436400 MtrunA17_Chr4g0009781 30.451 532 319 16 177 682 199 705 3.90e-56 208
Msa1436400 MtrunA17_Chr3g0082811 27.606 681 413 23 133 774 150 789 1.17e-55 205
Msa1436400 MtrunA17_Chr3g0086221 27.411 788 490 28 31 777 51 797 1.24e-55 207
Msa1436400 MtrunA17_Chr3g0082881 27.518 705 415 25 133 778 150 817 1.98e-55 205
Msa1436400 MtrunA17_Chr3g0086161 27.125 800 511 24 14 778 36 798 2.67e-55 206
Msa1436400 MtrunA17_Chr3g0085451 29.167 672 421 22 139 778 140 788 5.65e-55 205
Msa1436400 MtrunA17_Chr3g0086151 26.633 796 517 25 14 777 36 796 2.31e-54 202
Msa1436400 MtrunA17_Chr6g0475491 27.231 661 402 23 2 625 28 646 2.64e-54 201
Msa1436400 MtrunA17_Chr3g0085561 28.369 705 422 25 139 793 137 808 2.69e-54 203
Msa1436400 MtrunA17_Chr3g0085331 28.429 700 422 25 139 793 168 833 2.93e-54 203
Msa1436400 MtrunA17_Chr3g0091061 27.966 708 441 26 31 704 57 729 3.34e-54 203
Msa1436400 MtrunA17_Chr3g0085801 28.227 705 394 22 119 778 145 782 5.21e-54 202
Msa1436400 MtrunA17_Chr3g0100911 51.961 204 93 2 595 796 1 201 5.40e-54 186
Msa1436400 MtrunA17_Chr5g0430721 25.732 785 505 23 29 776 86 829 1.45e-53 201
Msa1436400 MtrunA17_Chr3g0087541 28.402 676 426 20 139 778 168 821 1.53e-53 201
Msa1436400 MtrunA17_Chr3g0087701 27.641 814 495 28 13 777 32 800 1.76e-53 201
Msa1436400 MtrunA17_Chr3g0090651 28.028 710 438 28 31 704 57 729 5.17e-53 199
Msa1436400 MtrunA17_Chr3g0087581 28.967 687 424 22 15 675 37 685 7.85e-53 199
Msa1436400 MtrunA17_Chr3g0086181 26.918 795 514 26 14 777 36 794 1.15e-52 197
Msa1436400 MtrunA17_Chr4g0010201 29.887 532 316 17 177 680 199 701 1.67e-52 198
Msa1436400 MtrunA17_Chr2g0316291 28.341 681 437 24 141 790 169 829 1.84e-52 197
Msa1436400 MtrunA17_Chr6g0471941 26.929 661 399 22 2 625 28 641 4.11e-52 196
Msa1436400 MtrunA17_Chr5g0414311 27.405 686 426 22 29 677 45 695 4.30e-52 197
Msa1436400 MtrunA17_Chr3g0084081 28.955 670 416 23 139 777 168 808 7.62e-52 196
Msa1436400 MtrunA17_Chr3g0086621 26.441 798 516 26 14 777 36 796 8.64e-52 196
Msa1436400 MtrunA17_Chr4g0010221 29.623 584 346 20 133 682 151 703 1.77e-51 194
Msa1436400 MtrunA17_Chr3g0089591 28.267 750 406 29 31 704 57 750 1.90e-51 195
Msa1436400 MtrunA17_Chr3g0082891 28.265 559 356 17 133 675 150 679 2.11e-51 193
Msa1436400 MtrunA17_Chr5g0415471 26.225 694 419 21 29 687 45 680 2.19e-51 194
Msa1436400 MtrunA17_Chr3g0087841 26.571 700 431 24 31 704 57 699 2.69e-51 194
Msa1436400 MtrunA17_Chr1g0197241 26.196 836 514 26 7 781 668 1461 3.39e-51 194
Msa1436400 MtrunA17_Chr5g0414181 27.116 697 434 23 4 671 26 677 3.73e-51 193
Msa1436400 MtrunA17_Chr3g0085471 29.542 589 373 20 139 709 168 732 4.17e-51 194
Msa1436400 MtrunA17_Chr8g0338621 26.646 653 410 23 2 625 28 640 2.50e-50 187
Msa1436400 MtrunA17_Chr3g0084051 27.571 700 429 23 139 790 168 837 3.71e-50 191
Msa1436400 MtrunA17_Chr3g0082791 27.795 644 405 22 167 778 199 814 4.87e-50 190
Msa1436400 MtrunA17_Chr6g0467961 27.387 639 420 18 29 654 45 652 6.28e-50 189
Msa1436400 MtrunA17_Chr3g0090691 27.982 679 420 25 31 675 57 700 1.01e-49 189
Msa1436400 MtrunA17_Chr3g0091081 27.479 706 445 25 31 704 57 727 1.56e-49 189
Msa1436400 MtrunA17_Chr3g0089911 27.736 667 411 22 29 674 55 671 1.59e-49 185
Msa1436400 MtrunA17_Chr3g0090371 26.763 695 435 23 31 704 57 698 1.85e-49 189
Msa1436400 MtrunA17_Chr3g0084031 27.750 591 377 18 139 705 170 734 2.16e-49 188
Msa1436400 MtrunA17_Chr3g0090141 25.741 742 448 26 9 704 15 699 2.26e-49 188
Msa1436400 MtrunA17_Chr3g0085651 27.959 676 421 22 139 778 159 804 2.29e-49 189
Msa1436400 MtrunA17_Chr4g0010251 29.981 527 312 17 175 675 197 692 3.09e-49 187
Msa1436400 MtrunA17_Chr8g0338671 29.959 484 296 16 141 604 47 507 4.63e-49 182
Msa1436400 MtrunA17_Chr1g0189551 26.590 692 414 22 4 664 58 686 7.02e-49 186
Msa1436400 MtrunA17_Chr8g0352861 26.476 593 386 17 144 709 177 746 7.61e-49 187
Msa1436400 MtrunA17_Chr5g0429951 26.466 665 432 18 9 648 24 656 9.10e-49 186
Msa1436400 MtrunA17_Chr1g0155991 24.406 799 499 25 29 777 45 788 9.11e-49 186
Msa1436400 MtrunA17_Chr6g0470081 26.430 647 410 22 29 648 45 652 9.93e-49 186
Msa1436400 MtrunA17_Chr8g0355411 26.913 758 472 29 20 738 35 749 1.19e-48 185
Msa1436400 MtrunA17_Chr8g0348931 27.399 719 436 26 34 705 56 735 2.17e-48 185
Msa1436400 MtrunA17_Chr8g0337891 25.452 719 451 21 2 674 28 707 2.65e-48 183
Msa1436400 MtrunA17_Chr6g0470011 26.553 644 413 22 29 648 45 652 2.70e-48 185
Msa1436400 MtrunA17_Chr5g0430641 26.145 830 494 28 10 777 15 787 2.82e-48 184
Msa1436400 MtrunA17_Chr1g0164611 27.638 597 377 16 167 730 201 775 3.69e-48 184
Msa1436400 MtrunA17_Chr5g0430511 25.850 824 503 27 9 778 24 793 4.98e-48 184
Msa1436400 MtrunA17_Chr6g0468451 26.267 651 432 22 20 654 36 654 5.13e-48 184
Msa1436400 MtrunA17_Chr8g0338261 24.373 837 545 28 2 796 28 818 5.15e-48 184
Msa1436400 MtrunA17_Chr3g0089211 28.075 691 403 29 31 675 104 746 7.69e-48 184
Msa1436400 MtrunA17_Chr6g0468151 26.276 666 437 22 2 648 24 654 9.08e-48 183
Msa1436400 MtrunA17_Chr7g0218941 26.244 663 399 21 2 625 28 639 9.31e-48 183
Msa1436400 MtrunA17_Chr3g0082101 27.509 578 350 17 167 730 201 723 9.99e-48 182
Msa1436400 MtrunA17_Chr7g0221481 27.083 672 421 21 16 650 35 674 1.02e-47 182
Msa1436400 MtrunA17_Chr8g0338391 25.762 656 413 21 9 629 28 644 1.29e-47 182
Msa1436400 MtrunA17_Chr3g0092241 26.847 704 453 23 31 704 57 728 1.43e-47 182
Msa1436400 MtrunA17_Chr3g0092261 26.302 768 486 28 29 752 100 831 2.06e-47 182
Msa1436400 MtrunA17_Chr7g0248221 26.061 683 423 24 14 664 33 665 2.06e-47 181
Msa1436400 MtrunA17_Chr3g0089251 27.931 691 404 28 31 675 86 728 2.88e-47 182
Msa1436400 MtrunA17_Chr5g0430141 25.732 820 513 26 8 777 20 793 3.28e-47 181
Msa1436400 MtrunA17_Chr3g0081841 42.453 212 119 1 135 346 2 210 4.39e-47 175
Msa1436400 MtrunA17_Chr3g0081841 32.512 203 124 3 358 556 150 343 1.31e-20 96.3
Msa1436400 MtrunA17_Chr3g0081841 38.384 99 61 0 682 780 389 487 1.66e-11 67.4
Msa1436400 MtrunA17_Chr3g0089651 27.180 688 417 23 31 675 57 703 4.91e-47 181
Msa1436400 MtrunA17_Chr3g0082391 26.462 684 433 22 29 676 54 703 7.04e-47 179
Msa1436400 MtrunA17_Chr5g0429961 25.666 826 502 30 9 777 14 784 8.46e-47 180
Msa1436400 MtrunA17_Chr3g0089871 26.907 721 433 30 29 715 55 715 8.48e-47 181
Msa1436400 MtrunA17_Chr3g0089761 26.908 773 471 28 31 752 57 786 1.57e-46 180
Msa1436400 MtrunA17_Chr3g0087731 27.649 604 384 17 177 753 2 579 1.63e-46 179
Msa1436400 MtrunA17_Chr3g0090431 28.727 550 333 19 167 704 69 571 1.90e-46 179
Msa1436400 MtrunA17_Chr4g0051651 25.411 669 390 19 1 603 45 670 2.04e-46 176
Msa1436400 MtrunA17_Chr3g0089541 27.286 700 400 27 31 675 57 702 2.48e-46 179
Msa1436400 MtrunA17_Chr3g0089781 27.637 673 427 23 34 675 56 699 2.54e-46 179
Msa1436400 MtrunA17_Chr3g0086091 29.560 636 385 26 177 777 2 609 2.82e-46 178
Msa1436400 MtrunA17_Chr8g0346831 26.100 659 409 21 2 625 28 643 2.90e-46 178
Msa1436400 MtrunA17_Chr5g0414201 25.306 818 528 28 4 781 26 800 3.08e-46 178
Msa1436400 MtrunA17_Chr3g0089991 26.890 688 419 23 31 675 57 703 3.44e-46 179
Msa1436400 MtrunA17_Chr2g0299101 26.825 589 373 17 154 709 178 741 3.70e-46 177
Msa1436400 MtrunA17_Chr3g0089471 26.366 732 440 25 31 704 57 747 4.97e-46 178
Msa1436400 MtrunA17_Chr3g0090401 25.062 806 493 31 9 754 226 980 6.08e-46 178
Msa1436400 MtrunA17_Chr5g0431051 25.343 801 502 25 24 776 36 788 6.22e-46 177
Msa1436400 MtrunA17_Chr6g0468101 26.224 633 386 19 29 648 45 609 2.16e-45 176
Msa1436400 MtrunA17_Chr6g0468271 25.653 651 425 16 20 650 36 647 2.70e-45 176
Msa1436400 MtrunA17_Chr1g0169901 26.243 724 441 26 29 709 54 727 3.12e-45 176
Msa1436400 MtrunA17_Chr1g0155321 24.348 805 490 29 10 752 15 762 3.43e-45 175
Msa1436400 MtrunA17_Chr5g0430441 25.131 764 473 24 9 717 24 743 3.72e-45 175
Msa1436400 MtrunA17_Chr2g0299121 26.486 589 375 17 154 709 178 741 5.25e-45 175
Msa1436400 MtrunA17_Chr3g0089501 27.114 686 416 24 31 675 55 697 5.64e-45 174
Msa1436400 MtrunA17_Chr6g0470021 28.918 536 332 20 133 648 36 542 6.28e-45 174
Msa1436400 MtrunA17_Chr4g0027251 24.519 832 512 27 10 777 15 794 6.69e-45 174
Msa1436400 MtrunA17_Chr2g0299091 27.645 586 372 17 154 709 152 715 9.38e-45 174
Msa1436400 MtrunA17_Chr3g0089601 28.017 721 415 27 31 713 55 709 1.04e-44 173
Msa1436400 MtrunA17_Chr5g0415511 25.571 657 419 20 29 649 45 667 1.23e-44 172
Msa1436400 MtrunA17_Chr3g0123111 25.857 642 415 20 29 648 45 647 1.49e-44 173
Msa1436400 MtrunA17_Chr6g0468021 27.215 632 418 17 29 648 45 646 1.50e-44 173
Msa1436400 MtrunA17_Chr3g0085931 27.769 641 407 22 29 648 45 650 2.09e-44 173
Msa1436400 MtrunA17_Chr3g0089961 28.430 605 361 25 139 705 165 735 2.14e-44 172
Msa1436400 MtrunA17_Chr5g0414231 26.216 473 307 10 29 480 45 496 3.02e-44 167
Msa1436400 MtrunA17_Chr1g0164391 25.468 695 436 22 29 681 54 708 3.25e-44 172
Msa1436400 MtrunA17_Chr6g0468121 26.040 649 439 19 20 655 36 656 7.12e-44 171
Msa1436400 MtrunA17_Chr5g0430951 25.296 676 439 21 2 653 24 657 8.24e-44 170
Msa1436400 MtrunA17_Chr3g0086741 26.040 649 426 20 139 752 176 805 1.60e-43 169
Msa1436400 MtrunA17_Chr5g0430581 24.904 779 504 23 9 752 24 756 1.67e-43 170
Msa1436400 MtrunA17_Chr5g0430621 26.328 847 504 35 9 791 14 804 1.68e-43 170
Msa1436400 MtrunA17_Chr5g0430291 24.937 794 496 27 9 752 24 767 2.37e-43 169
Msa1436400 MtrunA17_Chr7g0244231 24.842 789 505 25 29 778 45 784 2.69e-43 169
Msa1436400 MtrunA17_Chr3g0089811 26.554 708 421 26 31 704 57 699 2.92e-43 169
Msa1436400 MtrunA17_Chr2g0309721 25.352 710 453 24 31 704 57 725 4.92e-43 169
Msa1436400 MtrunA17_Chr6g0467911 25.806 651 409 23 29 648 45 652 5.73e-43 167
Msa1436400 MtrunA17_Chr8g0338251 23.985 788 490 26 2 744 28 751 5.97e-43 167
Msa1436400 MtrunA17_Chr3g0089421 29.043 575 333 23 139 675 164 701 8.38e-43 168
Msa1436400 MtrunA17_Chr6g0468331 26.531 637 391 20 29 648 45 621 8.56e-43 166
Msa1436400 MtrunA17_Chr5g0446611 28.254 630 380 24 166 756 197 793 1.16e-42 167
Msa1436400 MtrunA17_Chr7g0248531 27.980 604 347 23 139 717 155 695 3.69e-42 166
Msa1436400 MtrunA17_Chr1g0164631 25.564 665 404 23 29 631 54 689 3.72e-42 166
Msa1436400 MtrunA17_Chr3g0085521 25.519 674 437 22 144 777 149 797 6.03e-42 165
Msa1436400 MtrunA17_Chr7g0257201 24.913 863 508 32 4 787 30 831 7.10e-42 164
Msa1436400 MtrunA17_Chr3g0082131 26.284 662 411 24 31 648 55 683 1.29e-41 164
Msa1436400 MtrunA17_Chr1g0197201 25.000 768 477 22 83 781 536 1273 1.54e-41 164
Msa1436400 MtrunA17_Chr5g0413811 27.708 480 312 14 199 671 1 452 1.76e-41 162
Msa1436400 MtrunA17_Chr1g0169951 26.765 680 428 20 1 648 44 685 1.76e-41 162
Msa1436400 MtrunA17_Chr3g0082311 24.855 688 436 23 29 675 54 701 2.67e-41 163
Msa1436400 MtrunA17_Chr3g0113481 24.704 676 440 22 26 675 50 682 2.78e-41 162
Msa1436400 MtrunA17_Chr7g0257541 25.516 678 438 22 1 648 46 686 3.95e-41 162
Msa1436400 MtrunA17_Chr6g0456131 27.723 505 312 14 178 653 193 673 5.68e-41 162
Msa1436400 MtrunA17_Chr4g0025391 27.562 566 361 19 167 706 189 731 6.07e-41 162
Msa1436400 MtrunA17_Chr3g0085551 25.481 675 443 25 139 777 42 692 7.07e-41 160
Msa1436400 MtrunA17_Chr3g0100721 45.000 200 99 4 1 192 23 219 1.19e-40 149
Msa1436400 MtrunA17_Chr8g0338361 27.049 488 305 16 141 604 29 489 1.20e-40 157
Msa1436400 MtrunA17_Chr6g0468341 27.438 441 292 10 29 460 45 466 1.57e-40 160
Msa1436400 MtrunA17_Chr6g0456121 29.102 512 299 17 139 625 149 621 2.11e-40 160
Msa1436400 MtrunA17_Chr1g0164581 27.035 651 396 23 31 648 55 659 3.32e-40 160
Msa1436400 MtrunA17_Chr2g0282991 29.015 548 304 23 166 675 194 694 3.70e-40 160
Msa1436400 MtrunA17_Chr1g0147141 26.998 563 355 19 167 705 201 731 3.87e-40 159
Msa1436400 MtrunA17_Chr2g0299151 23.876 712 471 21 32 712 57 728 4.50e-40 159
Msa1436400 MtrunA17_Chr4g0020501 26.930 583 343 18 29 574 10 546 4.96e-40 159
Msa1436400 MtrunA17_Chr3g0085131 26.347 668 436 21 141 777 152 794 6.91e-40 159
Msa1436400 MtrunA17_Chr3g0113791 24.668 677 439 23 26 675 50 682 8.39e-40 159
Msa1436400 MtrunA17_Chr3g0085751 24.025 795 526 26 27 777 40 800 9.73e-40 158
Msa1436400 MtrunA17_Chr7g0248431 27.419 496 313 16 14 482 33 508 1.25e-39 155
Msa1436400 MtrunA17_Chr7g0257221 24.584 842 510 29 4 774 30 817 1.35e-39 157
Msa1436400 MtrunA17_Chr3g0089931 26.667 495 294 14 29 497 55 506 1.41e-39 154
Msa1436400 MtrunA17_Chr3g0082351 25.263 665 409 23 29 648 54 675 2.34e-39 157
Msa1436400 MtrunA17_Chr3g0101401 44.512 164 88 2 74 235 21 183 2.30e-38 141
Msa1436400 MtrunA17_Chr4g0071021 28.472 432 253 13 20 432 32 426 2.61e-38 148
Msa1436400 MtrunA17_Chr3g0084971 26.882 744 441 31 29 710 55 757 2.71e-38 154
Msa1436400 MtrunA17_Chr3g0091041 31.988 347 191 13 167 501 197 510 4.16e-38 149
Msa1436400 MtrunA17_Chr8g0352211 25.385 650 419 17 8 625 1027 1642 9.55e-38 152
Msa1436400 MtrunA17_Chr5g0433771 25.749 668 452 20 14 654 33 683 1.52e-37 151
Msa1436400 MtrunA17_Chr3g0078361 26.509 464 299 14 174 619 2 441 8.56e-37 144
Msa1436400 MtrunA17_Chr8g0351821 27.990 418 264 13 29 432 45 439 1.31e-36 144
Msa1436400 MtrunA17_Chr3g0084061 25.656 686 429 21 140 777 159 811 2.17e-36 148
Msa1436400 MtrunA17_Chr7g0257191 24.713 785 492 27 1 741 44 773 3.52e-36 147
Msa1436400 MtrunA17_Chr5g0417301 26.383 470 256 13 29 480 45 442 4.57e-36 144
Msa1436400 MtrunA17_Chr3g0101171 62.963 108 39 1 399 506 5 111 5.58e-36 131
Msa1436400 MtrunA17_Chr3g0091011 25.849 677 421 22 139 777 151 784 6.14e-36 146
Msa1436400 MtrunA17_Chr3g0085091 25.737 746 473 27 82 777 94 808 4.87e-35 144
Msa1436400 MtrunA17_Chr3g0089431 27.586 435 247 13 34 432 56 458 7.57e-35 139
Msa1436400 MtrunA17_Chr3g0083621 24.076 785 487 27 31 752 60 798 8.20e-35 143
Msa1436400 MtrunA17_Chr5g0430331 26.353 425 270 14 2 413 24 418 3.43e-34 136
Msa1436400 MtrunA17_Chr3g0083751 27.156 545 338 19 167 675 181 702 3.67e-34 141
Msa1436400 MtrunA17_Chr5g0430901 27.467 375 235 9 19 375 31 386 5.27e-34 140
Msa1436400 MtrunA17_Chr3g0085111 25.145 688 427 25 11 672 62 687 8.29e-34 140
Msa1436400 MtrunA17_Chr4g0008461 26.604 530 316 18 167 642 159 669 1.01e-33 139
Msa1436400 MtrunA17_Chr8g0344071 26.648 713 392 22 144 796 448 1089 3.41e-33 138
Msa1436400 MtrunA17_Chr3g0085171 25.128 585 399 15 144 705 141 709 5.95e-32 134
Msa1436400 MtrunA17_Chr6g0484551 27.219 507 265 17 167 648 199 626 6.64e-32 133
Msa1436400 MtrunA17_Chr5g0417251 28.027 446 290 14 238 671 22 448 1.42e-31 131
Msa1436400 MtrunA17_Chr3g0083721 27.344 512 288 20 167 631 148 622 4.38e-31 131
Msa1436400 MtrunA17_Chr3g0091971 24.198 810 491 28 28 790 42 775 4.57e-31 131
Msa1436400 MtrunA17_Chr8g0355071 31.119 286 166 10 188 460 28 295 4.90e-31 124
Msa1436400 MtrunA17_Chr8g0356251 23.802 626 383 20 168 739 203 788 8.05e-31 130
Msa1436400 MtrunA17_Chr2g0309151 26.458 480 310 15 199 654 1 461 8.52e-31 127
Msa1436400 MtrunA17_Chr2g0308491 32.210 267 148 8 160 413 10 256 1.18e-30 121
Msa1436400 MtrunA17_Chr5g0414291 27.723 303 193 8 78 375 114 395 1.49e-30 125
Msa1436400 MtrunA17_Chr3g0080871 25.989 531 336 16 140 631 155 667 3.36e-30 128
Msa1436400 MtrunA17_Chr6g0469991 27.954 347 212 13 29 360 45 368 4.07e-30 122
Msa1436400 MtrunA17_Chr1g0159111 25.273 550 336 17 167 677 174 687 4.16e-30 127
Msa1436400 MtrunA17_Chr3g0085161 23.673 697 449 20 117 777 17 666 1.21e-29 126
Msa1436400 MtrunA17_Chr3g0087301 27.614 373 221 13 29 376 45 393 1.41e-29 126
Msa1436400 MtrunA17_Chr4g0010491 30.000 300 177 8 133 420 151 429 3.72e-29 121
Msa1436400 MtrunA17_Chr3g0113781 25.595 504 324 18 194 675 3 477 7.11e-29 123
Msa1436400 MtrunA17_Chr3g0084811 25.787 508 289 16 167 622 350 821 1.05e-28 124
Msa1436400 MtrunA17_Chr3g0080701 38.693 199 101 6 1 182 23 217 2.38e-28 114
Msa1436400 MtrunA17_Chr1g0189311 62.025 79 30 0 174 252 2 80 2.86e-28 108
Msa1436400 MtrunA17_Chr3g0085701 31.613 310 193 7 139 441 150 447 4.03e-28 121
Msa1436400 MtrunA17_Chr3g0084361 47.531 162 81 1 635 796 1 158 4.85e-28 114
Msa1436400 MtrunA17_Chr5g0415551 23.802 668 428 23 167 789 58 689 9.68e-28 119
Msa1436400 MtrunA17_Chr7g0248411 27.327 333 201 10 51 359 5 320 1.83e-27 114
Msa1436400 MtrunA17_Chr1g0189331 53.097 113 45 2 642 750 1 109 2.83e-27 106
Msa1436400 MtrunA17_Chr1g0197191 30.796 289 179 8 83 367 61 332 4.74e-27 113
Msa1436400 MtrunA17_Chr4g0048471 25.474 475 294 16 167 613 48 490 5.21e-27 117
Msa1436400 MtrunA17_Chr4g0048421 25.207 603 363 21 134 690 132 692 7.45e-27 117
Msa1436400 MtrunA17_Chr7g0257551 29.618 314 196 7 139 433 87 394 4.44e-26 112
Msa1436400 MtrunA17_Chr5g0410161 25.714 665 384 24 167 776 329 938 8.78e-26 114
Msa1436400 MtrunA17_Chr8g0338861 26.886 517 312 19 281 750 8 505 2.96e-25 111
Msa1436400 MtrunA17_Chr6g0478721 25.093 538 344 18 167 677 91 596 4.04e-25 111
Msa1436400 MtrunA17_Chr2g0299141 26.340 429 248 14 284 685 18 405 7.83e-25 108
Msa1436400 MtrunA17_Chr2g0299131 31.004 229 139 5 141 360 2 220 1.03e-24 103
Msa1436400 MtrunA17_Chr5g0415491 29.596 223 143 5 128 345 8 221 4.71e-24 101
Msa1436400 MtrunA17_Chr6g0468401 27.124 306 193 10 29 323 45 331 7.72e-24 103
Msa1436400 MtrunA17_Chr3g0083591 24.517 518 318 19 160 631 154 644 9.12e-24 107
Msa1436400 MtrunA17_Chr3g0081201 44.715 123 68 0 674 796 2 124 9.62e-24 100
Msa1436400 MtrunA17_Chr6g0468111 26.790 433 289 14 242 664 95 509 1.30e-23 105
Msa1436400 MtrunA17_Chr8g0338681 32.110 218 138 6 233 445 29 241 1.99e-23 100
Msa1436400 MtrunA17_Chr3g0108811 25.000 516 330 16 167 652 180 668 1.81e-22 103
Msa1436400 MtrunA17_Chr1g0168901 27.689 502 292 20 167 648 171 621 2.94e-22 102
Msa1436400 MtrunA17_Chr3g0105571 26.019 515 315 17 143 625 94 574 5.81e-22 100
Msa1436400 MtrunA17_Chr3g0107181 26.600 500 286 22 163 623 153 610 2.48e-21 100
Msa1436400 MtrunA17_Chr1g0167981 25.725 552 338 24 168 687 176 687 3.15e-21 100
Msa1436400 MtrunA17_Chr3g0085721 30.841 214 133 4 154 362 154 357 3.32e-21 96.7
Msa1436400 MtrunA17_Chr2g0313461 25.832 511 319 21 167 653 174 648 7.62e-21 98.6
Msa1436400 MtrunA17_Chr1g0172271 25.812 554 336 23 168 687 176 688 1.12e-20 97.4
Msa1436400 MtrunA17_Chr3g0082321 26.440 382 254 10 301 679 271 628 1.55e-20 97.1
Msa1436400 MtrunA17_Chr3g0096821 24.900 498 302 16 163 623 159 621 1.64e-20 97.4
Msa1436400 MtrunA17_Chr5g0410401 24.441 671 387 26 166 776 45 655 1.66e-20 97.1
Msa1436400 MtrunA17_Chr1g0160871 37.107 159 80 3 602 748 1 151 3.13e-20 88.2
Msa1436400 MtrunA17_Chr3g0108061 25.586 469 303 17 174 616 2 450 3.62e-20 95.5
Msa1436400 MtrunA17_Chr3g0086071 27.619 420 264 16 385 777 10 416 4.07e-20 95.5
Msa1436400 MtrunA17_Chr3g0105551 32.174 230 138 7 143 369 140 354 1.37e-19 94.7
Msa1436400 MtrunA17_Chr3g0083681 23.970 534 340 20 167 675 182 674 3.55e-19 93.2
Msa1436400 MtrunA17_Chr7g0229721 25.261 479 301 17 172 623 172 620 3.78e-19 92.8
Msa1436400 MtrunA17_Chr7g0229751 24.896 482 316 14 163 623 116 572 3.80e-19 92.8
Msa1436400 MtrunA17_Chr5g0414171 28.302 212 147 3 266 477 214 420 3.86e-19 90.9
Msa1436400 MtrunA17_Chr1g0169941 29.020 255 171 6 230 480 29 277 4.46e-19 89.7
Msa1436400 MtrunA17_Chr2g0323691 26.531 539 328 26 168 678 175 673 7.83e-19 92.4
Msa1436400 MtrunA17_Chr2g0313481 24.277 519 320 20 167 653 174 651 8.08e-19 92.0
Msa1436400 MtrunA17_Chr1g0174511 26.055 545 342 21 168 687 175 683 8.52e-19 92.0
Msa1436400 MtrunA17_Chr1g0172141 25.494 557 333 22 168 687 175 686 1.10e-18 91.7
Msa1436400 MtrunA17_Chr3g0108821 25.472 530 309 20 167 653 168 654 1.54e-18 91.3
Msa1436400 MtrunA17_Chr1g0163791 25.458 546 338 21 168 680 175 684 1.87e-18 90.9
Msa1436400 MtrunA17_Chr3g0085421 27.039 233 149 7 66 292 25 242 2.58e-18 85.5
Msa1436400 MtrunA17_Chr1g0153981 28.114 281 166 10 158 427 196 451 3.07e-18 89.7
Msa1436400 MtrunA17_Chr8g0392521 24.918 305 208 6 31 323 23 318 3.08e-18 87.0
Msa1436400 MtrunA17_Chr3g0108791 28.205 273 170 7 174 437 2 257 5.01e-18 87.8
Msa1436400 MtrunA17_Chr5g0416571 24.839 310 179 9 29 325 45 313 6.60e-18 85.9
Msa1436400 MtrunA17_Chr3g0096721 25.519 482 306 19 167 623 167 620 6.86e-18 89.0
Msa1436400 MtrunA17_Chr2g0314301 23.993 596 372 24 83 653 107 646 8.28e-18 89.0
Msa1436400 MtrunA17_Chr3g0101161 50.000 114 44 2 687 796 1 105 9.96e-18 82.0
Msa1436400 MtrunA17_Chr5g0444291 47.126 87 26 1 258 324 8 94 1.13e-17 79.0
Msa1436400 MtrunA17_Chr3g0083641 22.901 524 313 16 167 639 178 661 1.20e-17 88.2
Msa1436400 MtrunA17_Chr8g0360991 25.138 545 347 21 167 679 173 688 1.27e-17 88.2
Msa1436400 MtrunA17_Chr1g0172051 25.136 553 341 23 168 687 175 687 2.01e-17 87.8
Msa1436400 MtrunA17_Chr3g0108151 28.674 279 177 9 167 435 169 435 2.17e-17 87.4
Msa1436400 MtrunA17_Chr1g0189301 37.037 135 71 4 46 170 3 133 2.22e-17 79.3
Msa1436400 MtrunA17_Chr1g0164091 23.929 677 419 27 12 653 36 651 8.78e-17 85.1
Msa1436400 MtrunA17_Chr1g0197181 24.573 468 260 16 401 796 3 449 8.95e-17 84.3
Msa1436400 MtrunA17_Chr3g0105521 25.160 469 293 16 172 616 57 491 1.44e-16 84.7
Msa1436400 MtrunA17_Chr5g0410261 23.954 693 404 24 134 752 150 793 1.60e-16 84.3
Msa1436400 MtrunA17_Chr7g0257251 35.185 162 100 3 301 458 5 165 2.43e-16 77.8
Msa1436400 MtrunA17_Chr1g0172111 25.091 550 340 26 168 687 175 682 2.57e-16 83.6
Msa1436400 MtrunA17_Chr5g0410301 24.490 588 334 23 141 675 139 669 2.76e-16 83.6
Msa1436400 MtrunA17_Chr3g0097641 24.790 476 313 15 163 616 138 590 3.72e-16 83.2
Msa1436400 MtrunA17_Chr7g0223931 25.185 540 312 20 174 664 2 498 4.95e-16 82.4
Msa1436400 MtrunA17_Chr1g0164011 24.349 653 393 29 72 687 100 688 5.99e-16 82.8
Msa1436400 MtrunA17_Chr3g0085431 28.431 306 187 10 345 627 2 298 6.02e-16 81.6
Msa1436400 MtrunA17_Chr5g0402721 22.967 627 356 27 162 707 164 744 6.24e-16 82.4
Msa1436400 MtrunA17_Chr3g0108211 29.197 274 168 8 174 437 2 259 8.05e-16 80.9
Msa1436400 MtrunA17_Chr3g0108101 28.000 275 170 8 174 437 2 259 1.10e-15 78.2
Msa1436400 MtrunA17_Chr5g0439121 25.314 478 296 20 166 623 172 608 2.35e-15 80.9
Msa1436400 MtrunA17_Chr1g0160951 25.417 539 319 21 167 680 69 549 4.00e-15 80.1
Msa1436400 MtrunA17_Chr2g0313541 21.751 731 472 28 8 705 39 702 4.33e-15 80.1
Msa1436400 MtrunA17_Chr2g0313491 23.228 508 336 19 167 653 174 648 4.89e-15 79.7
Msa1436400 MtrunA17_Chr2g0282981 29.000 200 129 4 166 362 194 383 7.33e-15 77.8
Msa1436400 MtrunA17_Chr3g0107931 24.283 523 326 19 167 653 191 679 7.75e-15 79.3
Msa1436400 MtrunA17_Chr7g0221131 22.957 575 361 23 167 711 241 763 2.25e-14 77.4
Msa1436400 MtrunA17_Chr5g0402671 23.963 651 369 31 127 705 146 742 3.22e-14 77.0
Msa1436400 MtrunA17_Chr8g0374561 23.588 708 451 30 89 750 108 771 3.24e-14 76.6
Msa1436400 MtrunA17_Chr3g0091861 23.208 530 328 19 167 656 109 599 3.49e-14 77.0
Msa1436400 MtrunA17_Chr5g0402681 22.257 638 359 27 162 707 163 755 4.02e-14 76.6
Msa1436400 MtrunA17_Chr5g0410351 24.782 573 338 24 115 648 125 643 4.74e-14 76.6
Msa1436400 MtrunA17_Chr3g0091851 23.333 390 268 11 251 623 186 561 4.76e-14 76.6
Msa1436400 MtrunA17_Chr3g0107061 29.444 180 113 5 174 352 2 168 4.96e-14 70.9
Msa1436400 MtrunA17_Chr5g0415481 27.778 270 164 9 421 687 5 246 5.62e-14 75.1
Msa1436400 MtrunA17_Chr3g0091961 24.156 385 258 15 299 666 3 370 6.18e-14 74.7
Msa1436400 MtrunA17_Chr5g0402771 26.761 355 208 17 127 461 144 466 9.21e-14 75.5
Msa1436400 MtrunA17_Chr3g0108011 22.684 529 332 19 167 659 204 691 1.09e-13 75.5
Msa1436400 MtrunA17_Chr5g0414301 28.406 345 212 14 427 753 1 328 1.15e-13 74.7
Msa1436400 MtrunA17_Chr3g0100841 51.389 72 32 3 1 70 23 93 1.54e-13 67.8
Msa1436400 MtrunA17_Chr4g0005591 22.914 659 403 22 172 768 283 898 1.74e-13 74.7
Msa1436400 MtrunA17_Chr6g0478741 21.771 542 329 20 167 655 210 709 2.02e-13 74.3
Msa1436400 MtrunA17_Chr3g0107961 30.653 199 118 7 174 369 2 183 2.25e-13 73.2
Msa1436400 MtrunA17_Chr2g0313431 24.105 419 253 16 236 623 235 619 2.82e-13 73.6
Msa1436400 MtrunA17_Chr3g0099591 25.000 584 345 22 142 679 148 684 2.95e-13 73.9
Msa1436400 MtrunA17_Chr7g0255111 25.100 498 311 21 153 622 167 630 2.95e-13 74.3
Msa1436400 MtrunA17_Chr3g0108171 28.870 239 150 7 167 397 186 412 4.48e-13 73.6
Msa1436400 MtrunA17_Chr2g0313351 23.288 511 318 20 233 705 236 710 5.40e-13 73.2
Msa1436400 MtrunA17_Chr2g0313521 22.921 493 319 19 233 705 236 687 6.00e-13 72.8
Msa1436400 MtrunA17_Chr4g0010651 27.500 240 148 9 167 398 209 430 6.40e-13 72.8
Msa1436400 MtrunA17_Chr3g0082381 23.000 300 187 10 31 309 56 332 8.52e-13 70.5
Msa1436400 MtrunA17_Chr3g0081941 22.266 512 329 22 167 648 165 637 1.02e-12 72.4
Msa1436400 MtrunA17_Chr3g0107621 25.904 332 182 12 84 397 106 391 1.18e-12 71.2
Msa1436400 MtrunA17_Chr3g0097031 24.274 482 306 18 167 616 117 571 1.22e-12 71.6
Msa1436400 MtrunA17_Chr3g0091121 26.214 309 179 9 392 675 26 310 1.23e-12 71.6
Msa1436400 MtrunA17_Chr3g0082371 26.936 297 173 12 355 648 3 258 1.55e-12 70.9
Msa1436400 MtrunA17_Chr3g0100261 25.697 502 286 22 167 623 173 632 1.57e-12 71.6
Msa1436400 MtrunA17_Chr8g0342131 22.822 574 350 26 167 729 219 710 1.71e-12 71.2
Msa1436400 MtrunA17_Chr6g0468191 24.468 188 129 4 20 201 36 216 2.25e-12 68.2
Msa1436400 MtrunA17_Chr8g0370511 23.396 530 341 18 167 648 208 720 3.31e-12 70.5
Msa1436400 MtrunA17_Chr4g0010711 32.759 232 129 9 167 387 719 934 4.03e-12 70.5
Msa1436400 MtrunA17_Chr5g0414911 26.301 346 199 14 167 490 181 492 4.59e-12 70.1
Msa1436400 MtrunA17_Chr3g0085541 24.275 552 316 25 129 617 185 697 4.75e-12 69.7
Msa1436400 MtrunA17_Chr6g0478771 22.478 565 322 22 167 658 210 731 6.91e-12 69.3
Msa1436400 MtrunA17_Chr7g0256881 26.962 293 176 11 134 414 177 443 6.92e-12 69.7
Msa1436400 MtrunA17_Chr3g0105621 29.557 203 130 4 167 369 119 308 7.81e-12 68.6
Msa1436400 MtrunA17_Chr3g0105481 29.469 207 133 4 163 369 115 308 9.30e-12 69.3
Msa1436400 MtrunA17_Chr1g0163981 28.502 207 126 7 168 369 175 364 1.19e-11 68.6
Msa1436400 MtrunA17_Chr7g0223531 29.167 264 152 14 160 409 213 455 1.28e-11 68.6
Msa1436400 MtrunA17_Chr6g0479001 27.273 253 162 8 167 415 210 444 1.32e-11 68.6
Msa1436400 MtrunA17_Chr6g0474571 28.502 207 126 7 168 369 175 364 2.64e-11 67.8
Msa1436400 MtrunA17_Chr8g0339031 24.259 540 323 23 167 648 219 730 2.90e-11 67.4
Msa1436400 MtrunA17_Chr4g0005891 24.105 531 325 17 172 648 254 760 2.99e-11 67.4
Msa1436400 MtrunA17_Chr6g0478451 23.077 663 389 31 161 765 217 816 3.06e-11 67.4
Msa1436400 MtrunA17_Chr8g0342911 22.300 574 351 24 167 728 228 718 3.09e-11 67.4
Msa1436400 MtrunA17_Chr1g0163891 25.843 267 152 9 143 381 131 379 4.70e-11 67.0
Msa1436400 MtrunA17_Chr6g0454971 29.060 234 145 8 142 369 223 441 5.67e-11 66.6
Msa1436400 MtrunA17_Chr1g0146241 26.132 287 176 10 163 433 175 441 5.82e-11 66.6
Msa1436400 MtrunA17_Chr6g0454901 29.150 247 143 8 154 387 7 234 7.31e-11 65.5
Msa1436400 MtrunA17_Chr1g0163831 24.933 373 214 17 17 369 38 364 9.36e-11 65.1
Msa1436400 MtrunA17_Chr3g0085731 25.230 543 315 25 166 648 223 734 9.66e-11 65.9
Msa1436400 MtrunA17_Chr1g0189261 48.438 64 32 1 1 64 23 85 9.79e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1436400 AT3G07040.1 29.060 819 545 17 1 796 23 828 7.27e-100 330
Msa1436400 AT3G46710.1 27.446 787 502 24 1 751 23 776 2.77e-63 228
Msa1436400 AT3G46730.1 29.552 670 422 19 4 651 26 667 5.05e-62 224
Msa1436400 AT3G46530.1 26.792 795 527 24 1 784 23 773 1.41e-60 220
Msa1436400 AT3G50950.2 26.892 859 508 35 7 793 29 839 3.65e-56 207
Msa1436400 AT3G50950.1 26.892 859 508 35 7 793 29 839 3.65e-56 207
Msa1436400 AT1G59780.2 25.359 836 523 27 2 796 24 799 4.67e-56 207
Msa1436400 AT1G59780.1 25.359 836 523 27 2 796 29 804 4.77e-56 208
Msa1436400 AT1G58410.1 25.060 830 555 24 2 796 22 819 1.81e-55 206
Msa1436400 AT1G58410.4 25.060 830 555 24 2 796 22 819 1.81e-55 206
Msa1436400 AT1G58410.2 25.060 830 555 24 2 796 22 819 1.81e-55 206
Msa1436400 AT5G43470.3 26.284 837 536 27 2 796 24 821 6.35e-54 201
Msa1436400 AT5G43470.2 26.284 837 536 27 2 796 24 821 6.35e-54 201
Msa1436400 AT5G43470.4 26.284 837 536 27 2 796 24 821 6.35e-54 201
Msa1436400 AT5G43470.1 26.284 837 536 27 2 796 24 821 6.35e-54 201
Msa1436400 AT5G48620.6 25.926 837 539 27 2 796 24 821 7.38e-54 201
Msa1436400 AT5G48620.1 25.926 837 539 27 2 796 24 821 7.38e-54 201
Msa1436400 AT5G48620.4 25.926 837 539 27 2 796 24 821 7.38e-54 201
Msa1436400 AT5G48620.2 25.926 837 539 27 2 796 24 821 7.38e-54 201
Msa1436400 AT5G48620.3 25.926 837 539 27 2 796 24 821 7.38e-54 201
Msa1436400 AT5G48620.5 25.926 837 539 27 2 796 24 821 7.38e-54 201
Msa1436400 AT1G50180.1 27.172 633 396 18 4 604 26 625 2.10e-53 199
Msa1436400 AT1G53350.1 24.528 848 535 27 2 796 24 819 3.69e-53 199
Msa1436400 AT1G58390.1 25.269 835 548 26 2 796 24 822 7.49e-52 195
Msa1436400 AT1G58390.2 25.269 835 548 26 2 796 24 822 7.49e-52 195
Msa1436400 AT5G35450.2 24.669 831 548 25 2 796 24 812 4.05e-51 193
Msa1436400 AT5G35450.1 24.669 831 548 25 2 796 24 812 4.05e-51 193
Msa1436400 AT1G58400.3 24.279 832 564 25 2 796 24 826 3.17e-49 187
Msa1436400 AT1G58400.2 24.279 832 564 25 2 796 24 826 3.17e-49 187
Msa1436400 AT1G59124.1 26.099 751 472 27 1 709 23 732 8.95e-49 186
Msa1436400 AT1G58807.2 26.099 751 472 27 1 709 23 732 8.95e-49 186
Msa1436400 AT1G59124.2 26.099 751 472 27 1 709 23 732 2.22e-48 185
Msa1436400 AT1G58807.1 26.099 751 472 27 1 709 23 732 2.22e-48 185
Msa1436400 AT3G14470.1 25.788 698 418 24 29 672 53 704 9.08e-48 184
Msa1436400 AT3G14470.2 25.788 698 418 24 29 672 53 704 9.08e-48 184
Msa1436400 AT1G58602.2 25.301 747 481 24 1 705 23 734 1.18e-47 183
Msa1436400 AT1G58602.1 25.301 747 481 24 1 705 23 734 1.18e-47 183
Msa1436400 AT3G14460.1 24.854 684 439 19 29 672 50 698 6.42e-47 181
Msa1436400 AT1G58410.3 24.242 825 536 25 2 796 22 787 2.00e-46 179
Msa1436400 AT1G59620.2 26.361 698 428 21 131 796 14 657 5.86e-46 176
Msa1436400 AT1G10920.1 27.907 602 367 22 141 705 37 608 1.34e-45 175
Msa1436400 AT1G10920.2 27.907 602 367 22 141 705 37 608 1.34e-45 175
Msa1436400 AT1G10920.4 27.907 602 367 22 141 705 37 608 1.34e-45 175
Msa1436400 AT1G58400.1 23.522 829 564 23 2 796 24 816 1.64e-45 176
Msa1436400 AT1G59218.1 24.773 880 504 33 1 796 23 828 2.18e-45 176
Msa1436400 AT1G59218.2 24.773 880 504 33 1 796 23 828 2.18e-45 176
Msa1436400 AT1G59218.3 24.773 880 504 33 1 796 23 828 2.18e-45 176
Msa1436400 AT1G58848.1 24.773 880 504 33 1 796 23 828 2.18e-45 176
Msa1436400 AT1G58848.2 24.773 880 504 33 1 796 23 828 2.18e-45 176
Msa1436400 AT1G63350.3 25.481 624 398 21 88 678 74 663 4.35e-33 137
Msa1436400 AT1G63350.2 25.481 624 398 21 88 678 74 663 4.35e-33 137
Msa1436400 AT1G63350.4 25.481 624 398 21 88 678 74 663 4.53e-33 137
Msa1436400 AT1G63350.1 25.481 624 398 21 88 678 74 663 5.08e-33 137
Msa1436400 AT1G12220.3 27.897 466 290 19 167 608 57 500 4.35e-32 134
Msa1436400 AT1G12220.1 27.607 489 306 20 144 608 157 621 1.15e-31 133
Msa1436400 AT1G12220.2 27.607 489 306 20 144 608 157 621 1.15e-31 133
Msa1436400 AT1G62630.1 27.811 507 286 20 178 649 185 646 3.80e-31 131
Msa1436400 AT5G63020.1 25.577 520 313 18 167 662 176 645 4.78e-30 128
Msa1436400 AT4G26090.1 27.362 508 311 25 143 622 154 631 7.83e-30 127
Msa1436400 AT1G63360.2 26.496 585 334 24 178 728 150 672 1.47e-28 123
Msa1436400 AT1G63360.1 26.117 582 340 22 178 728 185 707 1.70e-28 123
Msa1436400 AT5G43740.1 26.015 542 306 22 170 674 176 659 3.76e-28 122
Msa1436400 AT5G43740.2 26.015 542 306 22 170 674 176 659 3.76e-28 122
Msa1436400 AT4G10780.1 27.888 502 296 20 170 648 178 636 1.03e-27 120
Msa1436400 AT1G12210.3 26.423 492 323 17 167 649 136 597 1.25e-27 120
Msa1436400 AT1G12210.2 26.423 492 323 17 167 649 136 597 1.25e-27 120
Msa1436400 AT4G10780.2 27.888 502 296 20 170 648 178 636 1.26e-27 120
Msa1436400 AT1G61180.2 27.423 485 271 19 167 622 174 606 1.60e-27 120
Msa1436400 AT1G61180.1 27.423 485 271 19 167 622 174 606 1.73e-27 120
Msa1436400 AT1G12210.1 26.423 492 323 17 167 649 178 639 1.74e-27 120
Msa1436400 AT1G61300.1 26.968 597 357 21 110 679 5 549 4.65e-27 118
Msa1436400 AT1G61190.2 28.172 536 311 22 167 675 175 663 1.20e-26 117
Msa1436400 AT1G61190.3 28.172 536 311 22 167 675 175 663 1.20e-26 117
Msa1436400 AT1G61190.1 28.172 536 311 22 167 675 175 663 2.75e-26 116
Msa1436400 AT1G15890.2 26.747 501 300 20 170 649 19 473 7.92e-26 114
Msa1436400 AT5G43730.4 25.421 535 317 20 170 674 177 659 1.19e-25 114
Msa1436400 AT5G43730.1 25.421 535 317 20 170 674 177 659 1.19e-25 114
Msa1436400 AT5G43730.3 25.421 535 317 20 170 674 177 659 1.19e-25 114
Msa1436400 AT5G43730.2 25.421 535 317 20 170 674 177 659 1.19e-25 114
Msa1436400 AT5G43730.5 25.421 535 317 20 170 674 177 659 1.19e-25 114
Msa1436400 AT1G51480.1 25.421 535 314 18 172 674 180 661 1.23e-25 114
Msa1436400 AT1G15890.1 26.747 501 300 20 170 649 179 633 1.86e-25 113
Msa1436400 AT1G61300.2 26.884 491 289 19 110 564 5 461 7.42e-25 111
Msa1436400 AT1G61310.1 26.248 541 321 20 167 674 176 671 1.48e-24 110
Msa1436400 AT1G61190.4 32.028 281 167 11 167 437 175 441 2.78e-24 109
Msa1436400 AT1G12290.4 28.859 298 173 12 167 447 135 410 2.89e-24 109
Msa1436400 AT1G12290.3 28.859 298 173 12 167 447 135 410 2.89e-24 109
Msa1436400 AT1G12290.2 28.859 298 173 12 167 447 135 410 2.89e-24 109
Msa1436400 AT1G12290.1 28.859 298 173 12 167 447 177 452 3.50e-24 109
Msa1436400 AT1G12280.1 26.263 495 292 21 157 625 168 615 4.56e-24 108
Msa1436400 AT4G27220.2 23.904 502 290 20 168 624 145 599 8.01e-23 105
Msa1436400 AT4G27220.1 23.904 502 290 20 168 624 137 591 8.45e-23 105
Msa1436400 AT5G47250.1 24.769 541 342 20 157 679 168 661 1.53e-20 97.8
Msa1436400 AT5G05400.2 24.903 518 314 21 167 653 8 481 1.60e-20 97.4
Msa1436400 AT5G05400.3 24.903 518 314 21 167 653 8 481 1.60e-20 97.4
Msa1436400 AT5G05400.1 25.000 520 311 22 167 653 177 650 1.83e-20 97.4
Msa1436400 AT1G10920.5 24.866 559 342 22 282 793 1 528 8.83e-20 94.4
Msa1436400 AT1G10920.3 24.866 559 342 22 282 793 1 528 8.83e-20 94.4
Msa1436400 AT5G47260.1 25.761 493 309 22 170 637 174 634 9.93e-20 95.1
Msa1436400 AT4G27190.1 24.190 525 313 22 168 648 167 650 2.32e-19 94.0
Msa1436400 AT1G12280.2 24.440 491 273 21 157 625 130 544 1.08e-16 85.1
Msa1436400 AT5G04720.1 26.224 286 172 9 145 423 180 433 8.73e-15 79.0
Msa1436400 AT1G27180.7 28.625 269 155 14 142 397 22 266 1.52e-13 75.5
Msa1436400 AT1G27180.6 28.625 269 155 14 142 397 22 266 1.52e-13 75.5
Msa1436400 AT1G27180.4 28.625 269 155 14 142 397 22 266 1.52e-13 75.5
Msa1436400 AT5G66910.1 23.871 620 369 30 155 706 175 759 1.71e-13 75.1
Msa1436400 AT1G27180.3 28.417 278 162 14 142 406 198 451 2.17e-13 74.7
Msa1436400 AT1G27180.5 28.625 269 155 14 142 397 196 440 2.18e-13 75.1
Msa1436400 AT1G27180.8 28.625 269 155 14 142 397 196 440 2.18e-13 75.1
Msa1436400 AT1G27180.2 28.625 269 155 14 142 397 198 442 2.44e-13 74.7
Msa1436400 AT1G27180.1 28.625 269 155 14 142 397 360 604 2.56e-13 74.7
Msa1436400 AT1G27170.1 29.707 239 133 13 144 369 189 405 3.07e-13 74.3
Msa1436400 AT4G33300.2 25.651 269 164 9 167 427 202 442 3.79e-13 73.9
Msa1436400 AT4G33300.1 25.651 269 164 9 167 427 202 442 3.79e-13 73.9
Msa1436400 AT1G27170.2 29.707 239 133 13 144 369 189 405 4.13e-13 73.9
Msa1436400 AT5G45050.4 31.343 201 117 7 168 364 27 210 1.45e-12 72.0
Msa1436400 AT5G45050.1 31.343 201 117 7 168 364 166 349 1.62e-12 72.0
Msa1436400 AT5G45050.3 31.343 201 117 7 168 364 166 349 1.79e-12 72.0
Msa1436400 AT5G45050.2 31.343 201 117 7 168 364 166 349 1.88e-12 72.0
Msa1436400 AT1G56510.1 22.049 576 368 26 138 695 180 692 4.80e-12 70.5
Msa1436400 AT3G15700.2 24.681 235 159 7 141 371 138 358 1.28e-11 67.8
Msa1436400 AT3G15700.1 24.681 235 159 7 141 371 138 358 1.33e-11 67.8
Msa1436400 AT5G66900.2 22.669 622 359 26 166 701 234 819 4.91e-11 67.0
Msa1436400 AT5G66900.1 22.756 624 356 27 166 701 186 771 5.43e-11 67.0
Msa1436400 AT5G47280.1 26.230 305 174 11 167 460 11 275 8.97e-11 65.9

Find 122 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTCATATCACTAATT+TGG 0.065385 tig0027929:-55061 None:intergenic
CTTGATGTTCCTCAAGATTT+TGG 0.124672 tig0027929:+56451 Msa1436400:CDS
ATGTATGGAATTCACAATTT+TGG 0.139025 tig0027929:+55546 Msa1436400:CDS
AAGTCATGTTTGTTGTATTT+TGG 0.177151 tig0027929:+55974 Msa1436400:CDS
TGCCATGATTGATAATAAAA+AGG 0.190217 tig0027929:+55583 Msa1436400:CDS
TTCATGTCTGAAATTTCTTT+TGG 0.210555 tig0027929:-54792 None:intergenic
TCTGAATCTTGTTTGCTATT+TGG 0.210743 tig0027929:-55028 None:intergenic
TTAAGCTTGCATATCTCTTT+TGG 0.221648 tig0027929:-56613 None:intergenic
CTTCCATATTCAATCATCTT+TGG 0.238505 tig0027929:+55097 Msa1436400:CDS
CTACGTGATGTTTATTTAGA+TGG 0.271057 tig0027929:+56712 Msa1436400:CDS
GGCTGAAGGGTTTGTGAAAA+AGG 0.279790 tig0027929:+56051 Msa1436400:CDS
TTTGGCTGAAGAACAATCTT+TGG 0.285677 tig0027929:+55694 Msa1436400:CDS
AGTCATTTGATCGACACTTT+GGG 0.288501 tig0027929:-55462 None:intergenic
TTGAGCATGCCAATGGCTTT+TGG 0.299437 tig0027929:-56544 None:intergenic
GTTCCAAAGATGATTGAATA+TGG 0.304275 tig0027929:-55106 None:intergenic
TGGGAGCAGCCAAAATGATT+AGG 0.312521 tig0027929:+54757 None:intergenic
CTTCGACATCTTACTCTTGA+TGG 0.312925 tig0027929:+56943 Msa1436400:CDS
ATCATTCATATCACTAATTT+GGG 0.313634 tig0027929:-55060 None:intergenic
GGGAGCAGCCAAAATGATTA+GGG 0.324956 tig0027929:+54758 None:intergenic
ACATACTGTAGCCTAGAAAA+TGG 0.335209 tig0027929:-56645 None:intergenic
GTAGTTTCAATCAGTATTGA+TGG 0.342476 tig0027929:+56145 Msa1436400:CDS
GCGATTGAATGTGCTTGATT+TGG 0.346678 tig0027929:+56414 Msa1436400:CDS
AACACTTTGATTGTCATGTA+TGG 0.351078 tig0027929:+55348 Msa1436400:CDS
GAAGGAATTATACAACCTTC+AGG 0.353443 tig0027929:-56010 None:intergenic
CACACAATTGTCACCATTGT+TGG 0.356655 tig0027929:+55263 Msa1436400:CDS
CAAGAGACATACTAATTGAT+TGG 0.364922 tig0027929:+55219 Msa1436400:CDS
AATTGGTCTTGATCGGTGTT+AGG 0.369886 tig0027929:+56797 Msa1436400:CDS
TGTCGAATTAATATCTTTGA+AGG 0.378783 tig0027929:-56028 None:intergenic
CCCCTAGCAATTGTACTCAT+TGG 0.379273 tig0027929:+55815 Msa1436400:CDS
TTGAAGATAAACAAAATTGT+AGG 0.382725 tig0027929:+55920 Msa1436400:CDS
AGAGAGAGGGTCAACAAGTT+TGG 0.384428 tig0027929:-57081 None:intergenic
ACTAAAACAGCTAAGGGAAT+TGG 0.394979 tig0027929:+56780 Msa1436400:CDS
CAGATCTAATTGCTATTGAT+AGG 0.396347 tig0027929:-56300 None:intergenic
AATTAGATCTGATAATTTGA+TGG 0.396807 tig0027929:+56306 Msa1436400:CDS
ACTAATTGATTGGTTGGTAG+AGG 0.399725 tig0027929:+55229 Msa1436400:CDS
TAAATCTAAAATACTTTAAG+TGG 0.417667 tig0027929:-56489 None:intergenic
TCTCAATCATACAATATAGA+AGG 0.418768 tig0027929:+55380 Msa1436400:CDS
CGAAGTGAGAAACTACTTGC+AGG 0.421414 tig0027929:+55496 Msa1436400:CDS
AGATTTGATCGGTAGAGGTT+TGG 0.429707 tig0027929:+56117 Msa1436400:CDS
GTTGTAAGTCCAAGGTTTCT+AGG 0.430460 tig0027929:-56570 None:intergenic
ACCTTCTGGATTTGCTAACT+TGG 0.430954 tig0027929:+54977 Msa1436400:CDS
AAGACATTCCATGACTTAAA+CGG 0.440001 tig0027929:+55731 Msa1436400:CDS
TTATCGTGTTTGATGATGTA+TGG 0.446208 tig0027929:+55531 Msa1436400:CDS
TTGTCCTCCCTTTCCAACAA+TGG 0.454219 tig0027929:-55282 None:intergenic
AAACATCACGTAGAGTTTGT+AGG 0.455604 tig0027929:-56708 None:intergenic
GAGTCATTTGATCGACACTT+TGG 0.457352 tig0027929:-55463 None:intergenic
CAATCAATTAGTATGTCTCT+TGG 0.459055 tig0027929:-55224 None:intergenic
AGATTTAGAGAGAACTTTCG+AGG 0.476600 tig0027929:+56499 Msa1436400:CDS
AGAAGACATGGAAACAAAAC+AGG 0.482020 tig0027929:+54869 Msa1436400:CDS
AGACATACTAATTGATTGGT+TGG 0.487041 tig0027929:+55223 Msa1436400:CDS
TGAGATTGTAAGACAAATCA+TGG 0.487338 tig0027929:-55958 None:intergenic
TCTTTGATTCAATTAAAAGA+TGG 0.487524 tig0027929:+56661 Msa1436400:CDS
AAACTACAAATTCGTGCAAA+CGG 0.490604 tig0027929:+56874 Msa1436400:CDS
TTGTAGGGATTCTTCTTGCA+AGG 0.490637 tig0027929:-56390 None:intergenic
TAGGAAAACTAAAACAGCTA+AGG 0.497467 tig0027929:+56773 Msa1436400:CDS
ATAAACAAAATTGTAGGTCT+CGG 0.498549 tig0027929:+55926 Msa1436400:CDS
GAAGAATCCCTACAAAATAC+AGG 0.498878 tig0027929:+56392 Msa1436400:CDS
TTAGCAGATTTGATCGGTAG+AGG 0.498954 tig0027929:+56112 Msa1436400:CDS
ACCAATGAGTACAATTGCTA+GGG 0.503386 tig0027929:-55822 None:intergenic
TAGGTTCTTGAGCATGCCAA+TGG 0.507040 tig0027929:-56551 None:intergenic
ATTGTCACCATTGTTGGAAA+GGG 0.507661 tig0027929:+55269 Msa1436400:CDS
ATTCAATTAAAAGATGGTAT+CGG 0.513064 tig0027929:+56667 Msa1436400:CDS
TTCGACATCTTACTCTTGAT+GGG 0.524611 tig0027929:+56944 Msa1436400:CDS
AGTGTATGAACTGAAAGGTT+TGG 0.524739 tig0027929:+55676 Msa1436400:CDS
AACATCACGTAGAGTTTGTA+GGG 0.526605 tig0027929:-56707 None:intergenic
TACAAAATTGAGCCTTTCGA+AGG 0.526621 tig0027929:-55169 None:intergenic
ACTTGTACGTTGTAAGTCCA+AGG 0.527193 tig0027929:-56578 None:intergenic
AAGATAGAAATACACAAGAA+TGG 0.528140 tig0027929:+55855 Msa1436400:CDS
GATATTAATTCGACAATGGA+TGG 0.530264 tig0027929:+56030 Msa1436400:CDS
CATTTGATCGACACTTTGGG+GGG 0.532223 tig0027929:-55459 None:intergenic
GATGTTTATTTAGATGGTGG+TGG 0.537439 tig0027929:+56718 Msa1436400:CDS
TGTAGGGATTCTTCTTGCAA+GGG 0.542298 tig0027929:-56389 None:intergenic
AATTGTCACCATTGTTGGAA+AGG 0.542331 tig0027929:+55268 Msa1436400:CDS
TGTGTACTTCCAAAAGCCAT+TGG 0.549167 tig0027929:+56529 Msa1436400:CDS
TTCAATCATCTTTGGAACAA+GGG 0.549744 tig0027929:+55105 Msa1436400:CDS
ATTCGACAATGGATGGCTGA+AGG 0.550766 tig0027929:+56037 Msa1436400:CDS
GTAAAGCTAATCCAAGAGCT+AGG 0.551004 tig0027929:+56754 Msa1436400:CDS
GTCACCATTGTTGGAAAGGG+AGG 0.551060 tig0027929:+55272 Msa1436400:CDS
CTAAGGGAATTGGTCTTGAT+CGG 0.553275 tig0027929:+56790 Msa1436400:CDS
GCTCAAGAACCTAGAAACCT+TGG 0.554042 tig0027929:+56555 Msa1436400:CDS
CTAATTGATTGGTTGGTAGA+GGG 0.554334 tig0027929:+55230 Msa1436400:CDS
AGCTGATGCTGAAGAAGACA+TGG 0.562980 tig0027929:+54857 Msa1436400:CDS
TTCGACAATGGATGGCTGAA+GGG 0.564915 tig0027929:+56038 Msa1436400:CDS
GTGCTTGATTTGGAGCATGT+TGG 0.567851 tig0027929:+56424 Msa1436400:CDS
ATTCAATCATCTTTGGAACA+AGG 0.569950 tig0027929:+55104 Msa1436400:CDS
ACATCGGAAGATGTTGCAGA+TGG 0.570923 tig0027929:+56085 Msa1436400:CDS
CTAGCAATTGTACTCATTGG+TGG 0.571417 tig0027929:+55818 Msa1436400:CDS
CGTGATGTTTATTTAGATGG+TGG 0.573775 tig0027929:+56715 Msa1436400:CDS
CACCAATGAGTACAATTGCT+AGG 0.575000 tig0027929:-55823 None:intergenic
AGGAAAACTAAAACAGCTAA+GGG 0.578575 tig0027929:+56774 Msa1436400:CDS
GACAACGTCCGTTTAAGTCA+TGG 0.580843 tig0027929:-55745 None:intergenic
AAATCTAAAATACTTTAAGT+GGG 0.581011 tig0027929:-56488 None:intergenic
GTCATTTGATCGACACTTTG+GGG 0.583564 tig0027929:-55461 None:intergenic
GTCAAACTTCCAAAATCTTG+AGG 0.585132 tig0027929:-56466 None:intergenic
GTCTTGATCGGTGTTAGGAG+CGG 0.587330 tig0027929:+56802 Msa1436400:CDS
CAAAGATATTAATTCGACAA+TGG 0.588336 tig0027929:+56026 Msa1436400:CDS
GAAACAAAACAGGAAATCAA+AGG 0.589544 tig0027929:+54879 Msa1436400:CDS
ACCAAGTTAGCAAATCCAGA+AGG 0.597593 tig0027929:-54984 None:intergenic
GTTGAAGTGTATGAACTGAA+AGG 0.600364 tig0027929:+55671 Msa1436400:CDS
ATTGTTGGAAAGGGAGGACA+AGG 0.600888 tig0027929:+55278 Msa1436400:CDS
AGCATTGTTGCTAAGAGAGA+GGG 0.603653 tig0027929:-57094 None:intergenic
AGAGTAAGATGTCGAAGCAA+AGG 0.605007 tig0027929:-56943 None:intergenic
GGAGCAGCCAAAATGATTAG+GGG 0.608298 tig0027929:+54759 None:intergenic
GGAAAGCATTGAAAGCTCAC+AGG 0.609748 tig0027929:+56327 Msa1436400:CDS
ACAATGCTTATGAAGCTGAA+AGG 0.610300 tig0027929:+57103 Msa1436400:CDS
ACAATATAGAAGGCTTGCTG+AGG 0.610339 tig0027929:+55390 Msa1436400:CDS
GGATATTTAGCAGATTTGAT+CGG 0.612503 tig0027929:+56106 Msa1436400:CDS
AAGCATTGTTGCTAAGAGAG+AGG 0.615556 tig0027929:-57095 None:intergenic
AGATGTCGAAGCAAAGGTGG+TGG 0.623567 tig0027929:-56937 None:intergenic
AGTTAGAGATGTTGCCTGTG+TGG 0.626295 tig0027929:+56968 Msa1436400:CDS
CAACATGGAGAACCTTCGAA+AGG 0.626574 tig0027929:+55151 Msa1436400:CDS
CAATATAGAAGGCTTGCTGA+GGG 0.643254 tig0027929:+55391 Msa1436400:CDS
TCATTTGATCGACACTTTGG+GGG 0.645970 tig0027929:-55460 None:intergenic
TGGTGGTGGTGAAAATGAAG+TGG 0.652349 tig0027929:+56732 Msa1436400:CDS
ATTTGATCGACACTTTGGGG+GGG 0.652840 tig0027929:-55458 None:intergenic
AGTGATATGAATGATGCAAG+TGG 0.653574 tig0027929:+55062 Msa1436400:CDS
CAATTAAAAGATGGTATCGG+AGG 0.660717 tig0027929:+56670 Msa1436400:CDS
GTAAGATGTCGAAGCAAAGG+TGG 0.698319 tig0027929:-56940 None:intergenic
TACTGCAACAAATTTCAACA+TGG 0.703467 tig0027929:+55136 Msa1436400:CDS
TCGTGCAAACGGATATAACA+CGG 0.709506 tig0027929:+56885 Msa1436400:CDS
ATGGATGAAGATGATGTCGT+AGG 0.712628 tig0027929:+55185 Msa1436400:CDS
CCAATGAGTACAATTGCTAG+GGG 0.727458 tig0027929:-55821 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATCTAAAATACTTTAAGT+GGG - tig0027929:56485-56504 None:intergenic 15.0%
!!! TAAATCTAAAATACTTTAAG+TGG - tig0027929:56486-56505 None:intergenic 15.0%
!!! AAATCTAAAATACTTTAAGT+GGG - tig0027929:56485-56504 None:intergenic 15.0%
!!! TAAATCTAAAATACTTTAAG+TGG - tig0027929:56486-56505 None:intergenic 15.0%
!! ATCATTCATATCACTAATTT+GGG - tig0027929:55057-55076 None:intergenic 20.0%
!!! GATATATCAATAAGATTTTC+TGG - tig0027929:55764-55783 None:intergenic 20.0%
!! AAAATTGTTGAAAAATGCAA+TGG + tig0027929:55788-55807 Msa1436400:CDS 20.0%
!! TTGAAGATAAACAAAATTGT+AGG + tig0027929:55920-55939 Msa1436400:CDS 20.0%
!! AATTAGATCTGATAATTTGA+TGG + tig0027929:56306-56325 Msa1436400:CDS 20.0%
!! TCTTTGATTCAATTAAAAGA+TGG + tig0027929:56661-56680 Msa1436400:CDS 20.0%
!! ATTCAATTAAAAGATGGTAT+CGG + tig0027929:56667-56686 Msa1436400:CDS 20.0%
!!! TTAACAAGATTTTGAAGTTT+TGG - tig0027929:56997-57016 None:intergenic 20.0%
!! ATCATTCATATCACTAATTT+GGG - tig0027929:55057-55076 None:intergenic 20.0%
!!! GATATATCAATAAGATTTTC+TGG - tig0027929:55764-55783 None:intergenic 20.0%
!! AAAATTGTTGAAAAATGCAA+TGG + tig0027929:55788-55807 Msa1436400:CDS 20.0%
!! TTGAAGATAAACAAAATTGT+AGG + tig0027929:55920-55939 Msa1436400:CDS 20.0%
!! AATTAGATCTGATAATTTGA+TGG + tig0027929:56306-56325 Msa1436400:CDS 20.0%
!! TCTTTGATTCAATTAAAAGA+TGG + tig0027929:56661-56680 Msa1436400:CDS 20.0%
!! ATTCAATTAAAAGATGGTAT+CGG + tig0027929:56667-56686 Msa1436400:CDS 20.0%
!!! TTAACAAGATTTTGAAGTTT+TGG - tig0027929:56997-57016 None:intergenic 20.0%
!!! TCATGTCTGAAATTTCTTTT+GGG - tig0027929:54788-54807 None:intergenic 25.0%
!!! TTCATGTCTGAAATTTCTTT+TGG - tig0027929:54789-54808 None:intergenic 25.0%
! CATCATTCATATCACTAATT+TGG - tig0027929:55058-55077 None:intergenic 25.0%
! TCTCAATCATACAATATAGA+AGG + tig0027929:55380-55399 Msa1436400:CDS 25.0%
!! ATGTATGGAATTCACAATTT+TGG + tig0027929:55546-55565 Msa1436400:CDS 25.0%
!! TGTATGGAATTCACAATTTT+GGG + tig0027929:55547-55566 Msa1436400:CDS 25.0%
!! TGCCATGATTGATAATAAAA+AGG + tig0027929:55583-55602 Msa1436400:CDS 25.0%
!! GCCATGATTGATAATAAAAA+GGG + tig0027929:55584-55603 Msa1436400:CDS 25.0%
! AAGATAGAAATACACAAGAA+TGG + tig0027929:55855-55874 Msa1436400:CDS 25.0%
! ATAAACAAAATTGTAGGTCT+CGG + tig0027929:55926-55945 Msa1436400:CDS 25.0%
!!! AAGTCATGTTTGTTGTATTT+TGG + tig0027929:55974-55993 Msa1436400:CDS 25.0%
!!! TATTTTGGATTATATCCTGA+AGG + tig0027929:55989-56008 Msa1436400:CDS 25.0%
! TGTCGAATTAATATCTTTGA+AGG - tig0027929:56025-56044 None:intergenic 25.0%
! CAAAGATATTAATTCGACAA+TGG + tig0027929:56026-56045 Msa1436400:CDS 25.0%
!!! ATGACCAATCATTTTTAACT+GGG + tig0027929:56260-56279 Msa1436400:CDS 25.0%
! AATCAATGAGATGCAAAAAA+TGG + tig0027929:56849-56868 Msa1436400:CDS 25.0%
!! CATTTTATCATCTGTTAGTT+GGG - tig0027929:57037-57056 None:intergenic 25.0%
!! TCATTTTATCATCTGTTAGT+TGG - tig0027929:57038-57057 None:intergenic 25.0%
!!! TCATGTCTGAAATTTCTTTT+GGG - tig0027929:54788-54807 None:intergenic 25.0%
!!! TTCATGTCTGAAATTTCTTT+TGG - tig0027929:54789-54808 None:intergenic 25.0%
! CATCATTCATATCACTAATT+TGG - tig0027929:55058-55077 None:intergenic 25.0%
! TCTCAATCATACAATATAGA+AGG + tig0027929:55380-55399 Msa1436400:CDS 25.0%
!! ATGTATGGAATTCACAATTT+TGG + tig0027929:55546-55565 Msa1436400:CDS 25.0%
!! TGTATGGAATTCACAATTTT+GGG + tig0027929:55547-55566 Msa1436400:CDS 25.0%
!! TGCCATGATTGATAATAAAA+AGG + tig0027929:55583-55602 Msa1436400:CDS 25.0%
!! GCCATGATTGATAATAAAAA+GGG + tig0027929:55584-55603 Msa1436400:CDS 25.0%
! AAGATAGAAATACACAAGAA+TGG + tig0027929:55855-55874 Msa1436400:CDS 25.0%
! ATAAACAAAATTGTAGGTCT+CGG + tig0027929:55926-55945 Msa1436400:CDS 25.0%
!!! AAGTCATGTTTGTTGTATTT+TGG + tig0027929:55974-55993 Msa1436400:CDS 25.0%
!!! TATTTTGGATTATATCCTGA+AGG + tig0027929:55989-56008 Msa1436400:CDS 25.0%
! TGTCGAATTAATATCTTTGA+AGG - tig0027929:56025-56044 None:intergenic 25.0%
! CAAAGATATTAATTCGACAA+TGG + tig0027929:56026-56045 Msa1436400:CDS 25.0%
!!! ATGACCAATCATTTTTAACT+GGG + tig0027929:56260-56279 Msa1436400:CDS 25.0%
! AATCAATGAGATGCAAAAAA+TGG + tig0027929:56849-56868 Msa1436400:CDS 25.0%
!! CATTTTATCATCTGTTAGTT+GGG - tig0027929:57037-57056 None:intergenic 25.0%
!! TCATTTTATCATCTGTTAGT+TGG - tig0027929:57038-57057 None:intergenic 25.0%
GAAACAAAACAGGAAATCAA+AGG + tig0027929:54879-54898 Msa1436400:CDS 30.0%
!! TCTGAATCTTGTTTGCTATT+TGG - tig0027929:55025-55044 None:intergenic 30.0%
CTTCCATATTCAATCATCTT+TGG + tig0027929:55097-55116 Msa1436400:CDS 30.0%
GTTCCAAAGATGATTGAATA+TGG - tig0027929:55103-55122 None:intergenic 30.0%
!! ATTCAATCATCTTTGGAACA+AGG + tig0027929:55104-55123 Msa1436400:CDS 30.0%
!! TTCAATCATCTTTGGAACAA+GGG + tig0027929:55105-55124 Msa1436400:CDS 30.0%
TACTGCAACAAATTTCAACA+TGG + tig0027929:55136-55155 Msa1436400:CDS 30.0%
CAATCAATTAGTATGTCTCT+TGG - tig0027929:55221-55240 None:intergenic 30.0%
CAAGAGACATACTAATTGAT+TGG + tig0027929:55219-55238 Msa1436400:CDS 30.0%
AGACATACTAATTGATTGGT+TGG + tig0027929:55223-55242 Msa1436400:CDS 30.0%
AACACTTTGATTGTCATGTA+TGG + tig0027929:55348-55367 Msa1436400:CDS 30.0%
!! TTATCGTGTTTGATGATGTA+TGG + tig0027929:55531-55550 Msa1436400:CDS 30.0%
! GCCCTTTTTATTATCAATCA+TGG - tig0027929:55588-55607 None:intergenic 30.0%
AAGACATTCCATGACTTAAA+CGG + tig0027929:55731-55750 Msa1436400:CDS 30.0%
TGAGATTGTAAGACAAATCA+TGG - tig0027929:55955-55974 None:intergenic 30.0%
GATATTAATTCGACAATGGA+TGG + tig0027929:56030-56049 Msa1436400:CDS 30.0%
AAAGGATAGGGTAAAAACAT+CGG + tig0027929:56069-56088 Msa1436400:CDS 30.0%
GGATATTTAGCAGATTTGAT+CGG + tig0027929:56106-56125 Msa1436400:CDS 30.0%
! GTAGTTTCAATCAGTATTGA+TGG + tig0027929:56145-56164 Msa1436400:CDS 30.0%
! TTTTTGCAAGAATATTAGCG+AGG + tig0027929:56237-56256 Msa1436400:CDS 30.0%
!! GATGACCAATCATTTTTAAC+TGG + tig0027929:56259-56278 Msa1436400:CDS 30.0%
! CAGATCTAATTGCTATTGAT+AGG - tig0027929:56297-56316 None:intergenic 30.0%
! TTAAGCTTGCATATCTCTTT+TGG - tig0027929:56610-56629 None:intergenic 30.0%
CTACGTGATGTTTATTTAGA+TGG + tig0027929:56712-56731 Msa1436400:CDS 30.0%
TAGGAAAACTAAAACAGCTA+AGG + tig0027929:56773-56792 Msa1436400:CDS 30.0%
AGGAAAACTAAAACAGCTAA+GGG + tig0027929:56774-56793 Msa1436400:CDS 30.0%
!! TTTTTGCATCTCATTGATTG+AGG - tig0027929:56848-56867 None:intergenic 30.0%
AAACTACAAATTCGTGCAAA+CGG + tig0027929:56874-56893 Msa1436400:CDS 30.0%
!! GAAAGGTTACATTTTCAAGA+TGG + tig0027929:57120-57139 Msa1436400:CDS 30.0%
GAAACAAAACAGGAAATCAA+AGG + tig0027929:54879-54898 Msa1436400:CDS 30.0%
!! TCTGAATCTTGTTTGCTATT+TGG - tig0027929:55025-55044 None:intergenic 30.0%
CTTCCATATTCAATCATCTT+TGG + tig0027929:55097-55116 Msa1436400:CDS 30.0%
GTTCCAAAGATGATTGAATA+TGG - tig0027929:55103-55122 None:intergenic 30.0%
!! ATTCAATCATCTTTGGAACA+AGG + tig0027929:55104-55123 Msa1436400:CDS 30.0%
!! TTCAATCATCTTTGGAACAA+GGG + tig0027929:55105-55124 Msa1436400:CDS 30.0%
TACTGCAACAAATTTCAACA+TGG + tig0027929:55136-55155 Msa1436400:CDS 30.0%
CAATCAATTAGTATGTCTCT+TGG - tig0027929:55221-55240 None:intergenic 30.0%
CAAGAGACATACTAATTGAT+TGG + tig0027929:55219-55238 Msa1436400:CDS 30.0%
AGACATACTAATTGATTGGT+TGG + tig0027929:55223-55242 Msa1436400:CDS 30.0%
AACACTTTGATTGTCATGTA+TGG + tig0027929:55348-55367 Msa1436400:CDS 30.0%
!! TTATCGTGTTTGATGATGTA+TGG + tig0027929:55531-55550 Msa1436400:CDS 30.0%
! GCCCTTTTTATTATCAATCA+TGG - tig0027929:55588-55607 None:intergenic 30.0%
AAGACATTCCATGACTTAAA+CGG + tig0027929:55731-55750 Msa1436400:CDS 30.0%
TGAGATTGTAAGACAAATCA+TGG - tig0027929:55955-55974 None:intergenic 30.0%
GATATTAATTCGACAATGGA+TGG + tig0027929:56030-56049 Msa1436400:CDS 30.0%
AAAGGATAGGGTAAAAACAT+CGG + tig0027929:56069-56088 Msa1436400:CDS 30.0%
GGATATTTAGCAGATTTGAT+CGG + tig0027929:56106-56125 Msa1436400:CDS 30.0%
! GTAGTTTCAATCAGTATTGA+TGG + tig0027929:56145-56164 Msa1436400:CDS 30.0%
! TTTTTGCAAGAATATTAGCG+AGG + tig0027929:56237-56256 Msa1436400:CDS 30.0%
!! GATGACCAATCATTTTTAAC+TGG + tig0027929:56259-56278 Msa1436400:CDS 30.0%
! CAGATCTAATTGCTATTGAT+AGG - tig0027929:56297-56316 None:intergenic 30.0%
! TTAAGCTTGCATATCTCTTT+TGG - tig0027929:56610-56629 None:intergenic 30.0%
CTACGTGATGTTTATTTAGA+TGG + tig0027929:56712-56731 Msa1436400:CDS 30.0%
TAGGAAAACTAAAACAGCTA+AGG + tig0027929:56773-56792 Msa1436400:CDS 30.0%
AGGAAAACTAAAACAGCTAA+GGG + tig0027929:56774-56793 Msa1436400:CDS 30.0%
!! TTTTTGCATCTCATTGATTG+AGG - tig0027929:56848-56867 None:intergenic 30.0%
AAACTACAAATTCGTGCAAA+CGG + tig0027929:56874-56893 Msa1436400:CDS 30.0%
!! GAAAGGTTACATTTTCAAGA+TGG + tig0027929:57120-57139 Msa1436400:CDS 30.0%
AGAAGACATGGAAACAAAAC+AGG + tig0027929:54869-54888 Msa1436400:CDS 35.0%
! TTTTGTCAAGAACAACCTTC+TGG + tig0027929:54963-54982 Msa1436400:CDS 35.0%
AGTGATATGAATGATGCAAG+TGG + tig0027929:55062-55081 Msa1436400:CDS 35.0%
TACAAAATTGAGCCTTTCGA+AGG - tig0027929:55166-55185 None:intergenic 35.0%
! TCGAAAGGCTCAATTTTGTA+TGG + tig0027929:55166-55185 Msa1436400:CDS 35.0%
!! ACTAATTGATTGGTTGGTAG+AGG + tig0027929:55229-55248 Msa1436400:CDS 35.0%
!! CTAATTGATTGGTTGGTAGA+GGG + tig0027929:55230-55249 Msa1436400:CDS 35.0%
AATTGTCACCATTGTTGGAA+AGG + tig0027929:55268-55287 Msa1436400:CDS 35.0%
ATTGTCACCATTGTTGGAAA+GGG + tig0027929:55269-55288 Msa1436400:CDS 35.0%
AAAAACTACTCTTGCCAAGA+AGG + tig0027929:55301-55320 Msa1436400:CDS 35.0%
! CACAAGTTTTACGAACAACA+AGG + tig0027929:55422-55441 Msa1436400:CDS 35.0%
AGTCATTTGATCGACACTTT+GGG - tig0027929:55459-55478 None:intergenic 35.0%
GAAACTACTTGCAGGAAAAA+AGG + tig0027929:55504-55523 Msa1436400:CDS 35.0%
GTTGAAGTGTATGAACTGAA+AGG + tig0027929:55671-55690 Msa1436400:CDS 35.0%
AGTGTATGAACTGAAAGGTT+TGG + tig0027929:55676-55695 Msa1436400:CDS 35.0%
TTTGGCTGAAGAACAATCTT+TGG + tig0027929:55694-55713 Msa1436400:CDS 35.0%
ACCAATGAGTACAATTGCTA+GGG - tig0027929:55819-55838 None:intergenic 35.0%
GAAGGAATTATACAACCTTC+AGG - tig0027929:56007-56026 None:intergenic 35.0%
AAGGGTTTGTGAAAAAGGAT+AGG + tig0027929:56056-56075 Msa1436400:CDS 35.0%
AGGGTTTGTGAAAAAGGATA+GGG + tig0027929:56057-56076 Msa1436400:CDS 35.0%
CCATCCCAGTTAAAAATGAT+TGG - tig0027929:56267-56286 None:intergenic 35.0%
!! CCAATCATTTTTAACTGGGA+TGG + tig0027929:56264-56283 Msa1436400:CDS 35.0%
GAAGAATCCCTACAAAATAC+AGG + tig0027929:56392-56411 Msa1436400:CDS 35.0%
! TCAATCGCCTGTATTTTGTA+GGG - tig0027929:56402-56421 None:intergenic 35.0%
! TTCAATCGCCTGTATTTTGT+AGG - tig0027929:56403-56422 None:intergenic 35.0%
! CTTGATGTTCCTCAAGATTT+TGG + tig0027929:56451-56470 Msa1436400:CDS 35.0%
GTCAAACTTCCAAAATCTTG+AGG - tig0027929:56463-56482 None:intergenic 35.0%
AGATTTAGAGAGAACTTTCG+AGG + tig0027929:56499-56518 Msa1436400:CDS 35.0%
! ATATCTCTTTTGGCATAGCT+TGG - tig0027929:56600-56619 None:intergenic 35.0%
!! AAAAAGCTACGCCATTTTCT+AGG + tig0027929:56628-56647 Msa1436400:CDS 35.0%
ACATACTGTAGCCTAGAAAA+TGG - tig0027929:56642-56661 None:intergenic 35.0%
! CAATTAAAAGATGGTATCGG+AGG + tig0027929:56670-56689 Msa1436400:CDS 35.0%
AACATCACGTAGAGTTTGTA+GGG - tig0027929:56704-56723 None:intergenic 35.0%
AAACATCACGTAGAGTTTGT+AGG - tig0027929:56705-56724 None:intergenic 35.0%
CGTGATGTTTATTTAGATGG+TGG + tig0027929:56715-56734 Msa1436400:CDS 35.0%
! GATGTTTATTTAGATGGTGG+TGG + tig0027929:56718-56737 Msa1436400:CDS 35.0%
!!! GTTTTAGTTTTCCTAGCTCT+TGG - tig0027929:56768-56787 None:intergenic 35.0%
ACTAAAACAGCTAAGGGAAT+TGG + tig0027929:56780-56799 Msa1436400:CDS 35.0%
TTCGACATCTTACTCTTGAT+GGG + tig0027929:56944-56963 Msa1436400:CDS 35.0%
ACAATGCTTATGAAGCTGAA+AGG + tig0027929:57103-57122 Msa1436400:CDS 35.0%
!! GGTTACATTTTCAAGATGGA+TGG + tig0027929:57124-57143 Msa1436400:CDS 35.0%
AGAAGACATGGAAACAAAAC+AGG + tig0027929:54869-54888 Msa1436400:CDS 35.0%
! TTTTGTCAAGAACAACCTTC+TGG + tig0027929:54963-54982 Msa1436400:CDS 35.0%
AGTGATATGAATGATGCAAG+TGG + tig0027929:55062-55081 Msa1436400:CDS 35.0%
TACAAAATTGAGCCTTTCGA+AGG - tig0027929:55166-55185 None:intergenic 35.0%
! TCGAAAGGCTCAATTTTGTA+TGG + tig0027929:55166-55185 Msa1436400:CDS 35.0%
!! ACTAATTGATTGGTTGGTAG+AGG + tig0027929:55229-55248 Msa1436400:CDS 35.0%
!! CTAATTGATTGGTTGGTAGA+GGG + tig0027929:55230-55249 Msa1436400:CDS 35.0%
AATTGTCACCATTGTTGGAA+AGG + tig0027929:55268-55287 Msa1436400:CDS 35.0%
ATTGTCACCATTGTTGGAAA+GGG + tig0027929:55269-55288 Msa1436400:CDS 35.0%
AAAAACTACTCTTGCCAAGA+AGG + tig0027929:55301-55320 Msa1436400:CDS 35.0%
! CACAAGTTTTACGAACAACA+AGG + tig0027929:55422-55441 Msa1436400:CDS 35.0%
AGTCATTTGATCGACACTTT+GGG - tig0027929:55459-55478 None:intergenic 35.0%
GAAACTACTTGCAGGAAAAA+AGG + tig0027929:55504-55523 Msa1436400:CDS 35.0%
GTTGAAGTGTATGAACTGAA+AGG + tig0027929:55671-55690 Msa1436400:CDS 35.0%
AGTGTATGAACTGAAAGGTT+TGG + tig0027929:55676-55695 Msa1436400:CDS 35.0%
TTTGGCTGAAGAACAATCTT+TGG + tig0027929:55694-55713 Msa1436400:CDS 35.0%
ACCAATGAGTACAATTGCTA+GGG - tig0027929:55819-55838 None:intergenic 35.0%
GAAGGAATTATACAACCTTC+AGG - tig0027929:56007-56026 None:intergenic 35.0%
AAGGGTTTGTGAAAAAGGAT+AGG + tig0027929:56056-56075 Msa1436400:CDS 35.0%
AGGGTTTGTGAAAAAGGATA+GGG + tig0027929:56057-56076 Msa1436400:CDS 35.0%
CCATCCCAGTTAAAAATGAT+TGG - tig0027929:56267-56286 None:intergenic 35.0%
!! CCAATCATTTTTAACTGGGA+TGG + tig0027929:56264-56283 Msa1436400:CDS 35.0%
GAAGAATCCCTACAAAATAC+AGG + tig0027929:56392-56411 Msa1436400:CDS 35.0%
! TCAATCGCCTGTATTTTGTA+GGG - tig0027929:56402-56421 None:intergenic 35.0%
! TTCAATCGCCTGTATTTTGT+AGG - tig0027929:56403-56422 None:intergenic 35.0%
! CTTGATGTTCCTCAAGATTT+TGG + tig0027929:56451-56470 Msa1436400:CDS 35.0%
GTCAAACTTCCAAAATCTTG+AGG - tig0027929:56463-56482 None:intergenic 35.0%
AGATTTAGAGAGAACTTTCG+AGG + tig0027929:56499-56518 Msa1436400:CDS 35.0%
! ATATCTCTTTTGGCATAGCT+TGG - tig0027929:56600-56619 None:intergenic 35.0%
!! AAAAAGCTACGCCATTTTCT+AGG + tig0027929:56628-56647 Msa1436400:CDS 35.0%
ACATACTGTAGCCTAGAAAA+TGG - tig0027929:56642-56661 None:intergenic 35.0%
! CAATTAAAAGATGGTATCGG+AGG + tig0027929:56670-56689 Msa1436400:CDS 35.0%
AACATCACGTAGAGTTTGTA+GGG - tig0027929:56704-56723 None:intergenic 35.0%
AAACATCACGTAGAGTTTGT+AGG - tig0027929:56705-56724 None:intergenic 35.0%
CGTGATGTTTATTTAGATGG+TGG + tig0027929:56715-56734 Msa1436400:CDS 35.0%
! GATGTTTATTTAGATGGTGG+TGG + tig0027929:56718-56737 Msa1436400:CDS 35.0%
!!! GTTTTAGTTTTCCTAGCTCT+TGG - tig0027929:56768-56787 None:intergenic 35.0%
ACTAAAACAGCTAAGGGAAT+TGG + tig0027929:56780-56799 Msa1436400:CDS 35.0%
TTCGACATCTTACTCTTGAT+GGG + tig0027929:56944-56963 Msa1436400:CDS 35.0%
ACAATGCTTATGAAGCTGAA+AGG + tig0027929:57103-57122 Msa1436400:CDS 35.0%
!! GGTTACATTTTCAAGATGGA+TGG + tig0027929:57124-57143 Msa1436400:CDS 35.0%
!! ACCTTCTGGATTTGCTAACT+TGG + tig0027929:54977-54996 Msa1436400:CDS 40.0%
ACCAAGTTAGCAAATCCAGA+AGG - tig0027929:54981-55000 None:intergenic 40.0%
ATGGATGAAGATGATGTCGT+AGG + tig0027929:55185-55204 Msa1436400:CDS 40.0%
CACACAATTGTCACCATTGT+TGG + tig0027929:55263-55282 Msa1436400:CDS 40.0%
GTTGTCGTCAAAAACCTTCT+TGG - tig0027929:55318-55337 None:intergenic 40.0%
!! ACAATATAGAAGGCTTGCTG+AGG + tig0027929:55390-55409 Msa1436400:CDS 40.0%
!! CAATATAGAAGGCTTGCTGA+GGG + tig0027929:55391-55410 Msa1436400:CDS 40.0%
TCATTTGATCGACACTTTGG+GGG - tig0027929:55457-55476 None:intergenic 40.0%
GTCATTTGATCGACACTTTG+GGG - tig0027929:55458-55477 None:intergenic 40.0%
GAGTCATTTGATCGACACTT+TGG - tig0027929:55460-55479 None:intergenic 40.0%
CCAATGAGTACAATTGCTAG+GGG - tig0027929:55818-55837 None:intergenic 40.0%
CACCAATGAGTACAATTGCT+AGG - tig0027929:55820-55839 None:intergenic 40.0%
CTAGCAATTGTACTCATTGG+TGG + tig0027929:55818-55837 Msa1436400:CDS 40.0%
TTAGCAGATTTGATCGGTAG+AGG + tig0027929:56112-56131 Msa1436400:CDS 40.0%
AGATTTGATCGGTAGAGGTT+TGG + tig0027929:56117-56136 Msa1436400:CDS 40.0%
TGTAGGGATTCTTCTTGCAA+GGG - tig0027929:56386-56405 None:intergenic 40.0%
TTGTAGGGATTCTTCTTGCA+AGG - tig0027929:56387-56406 None:intergenic 40.0%
GCGATTGAATGTGCTTGATT+TGG + tig0027929:56414-56433 Msa1436400:CDS 40.0%
TGTGTACTTCCAAAAGCCAT+TGG + tig0027929:56529-56548 Msa1436400:CDS 40.0%
GTTGTAAGTCCAAGGTTTCT+AGG - tig0027929:56567-56586 None:intergenic 40.0%
ACTTGTACGTTGTAAGTCCA+AGG - tig0027929:56575-56594 None:intergenic 40.0%
GTAAAGCTAATCCAAGAGCT+AGG + tig0027929:56754-56773 Msa1436400:CDS 40.0%
!! CTAAGGGAATTGGTCTTGAT+CGG + tig0027929:56790-56809 Msa1436400:CDS 40.0%
!! AATTGGTCTTGATCGGTGTT+AGG + tig0027929:56797-56816 Msa1436400:CDS 40.0%
TCGTGCAAACGGATATAACA+CGG + tig0027929:56885-56904 Msa1436400:CDS 40.0%
AGAGTAAGATGTCGAAGCAA+AGG - tig0027929:56940-56959 None:intergenic 40.0%
CTTCGACATCTTACTCTTGA+TGG + tig0027929:56943-56962 Msa1436400:CDS 40.0%
!!! TGAAGTTTTGGAATCCACAC+AGG - tig0027929:56985-57004 None:intergenic 40.0%
AGCATTGTTGCTAAGAGAGA+GGG - tig0027929:57091-57110 None:intergenic 40.0%
! AAGCATTGTTGCTAAGAGAG+AGG - tig0027929:57092-57111 None:intergenic 40.0%
!! ACCTTCTGGATTTGCTAACT+TGG + tig0027929:54977-54996 Msa1436400:CDS 40.0%
ACCAAGTTAGCAAATCCAGA+AGG - tig0027929:54981-55000 None:intergenic 40.0%
ATGGATGAAGATGATGTCGT+AGG + tig0027929:55185-55204 Msa1436400:CDS 40.0%
CACACAATTGTCACCATTGT+TGG + tig0027929:55263-55282 Msa1436400:CDS 40.0%
GTTGTCGTCAAAAACCTTCT+TGG - tig0027929:55318-55337 None:intergenic 40.0%
!! ACAATATAGAAGGCTTGCTG+AGG + tig0027929:55390-55409 Msa1436400:CDS 40.0%
!! CAATATAGAAGGCTTGCTGA+GGG + tig0027929:55391-55410 Msa1436400:CDS 40.0%
TCATTTGATCGACACTTTGG+GGG - tig0027929:55457-55476 None:intergenic 40.0%
GTCATTTGATCGACACTTTG+GGG - tig0027929:55458-55477 None:intergenic 40.0%
GAGTCATTTGATCGACACTT+TGG - tig0027929:55460-55479 None:intergenic 40.0%
CCAATGAGTACAATTGCTAG+GGG - tig0027929:55818-55837 None:intergenic 40.0%
CACCAATGAGTACAATTGCT+AGG - tig0027929:55820-55839 None:intergenic 40.0%
CTAGCAATTGTACTCATTGG+TGG + tig0027929:55818-55837 Msa1436400:CDS 40.0%
TTAGCAGATTTGATCGGTAG+AGG + tig0027929:56112-56131 Msa1436400:CDS 40.0%
AGATTTGATCGGTAGAGGTT+TGG + tig0027929:56117-56136 Msa1436400:CDS 40.0%
TGTAGGGATTCTTCTTGCAA+GGG - tig0027929:56386-56405 None:intergenic 40.0%
TTGTAGGGATTCTTCTTGCA+AGG - tig0027929:56387-56406 None:intergenic 40.0%
GCGATTGAATGTGCTTGATT+TGG + tig0027929:56414-56433 Msa1436400:CDS 40.0%
TGTGTACTTCCAAAAGCCAT+TGG + tig0027929:56529-56548 Msa1436400:CDS 40.0%
GTTGTAAGTCCAAGGTTTCT+AGG - tig0027929:56567-56586 None:intergenic 40.0%
ACTTGTACGTTGTAAGTCCA+AGG - tig0027929:56575-56594 None:intergenic 40.0%
GTAAAGCTAATCCAAGAGCT+AGG + tig0027929:56754-56773 Msa1436400:CDS 40.0%
!! CTAAGGGAATTGGTCTTGAT+CGG + tig0027929:56790-56809 Msa1436400:CDS 40.0%
!! AATTGGTCTTGATCGGTGTT+AGG + tig0027929:56797-56816 Msa1436400:CDS 40.0%
TCGTGCAAACGGATATAACA+CGG + tig0027929:56885-56904 Msa1436400:CDS 40.0%
AGAGTAAGATGTCGAAGCAA+AGG - tig0027929:56940-56959 None:intergenic 40.0%
CTTCGACATCTTACTCTTGA+TGG + tig0027929:56943-56962 Msa1436400:CDS 40.0%
!!! TGAAGTTTTGGAATCCACAC+AGG - tig0027929:56985-57004 None:intergenic 40.0%
AGCATTGTTGCTAAGAGAGA+GGG - tig0027929:57091-57110 None:intergenic 40.0%
! AAGCATTGTTGCTAAGAGAG+AGG - tig0027929:57092-57111 None:intergenic 40.0%
AGCTGATGCTGAAGAAGACA+TGG + tig0027929:54857-54876 Msa1436400:CDS 45.0%
CAACATGGAGAACCTTCGAA+AGG + tig0027929:55151-55170 Msa1436400:CDS 45.0%
TTGTCCTCCCTTTCCAACAA+TGG - tig0027929:55279-55298 None:intergenic 45.0%
ATTGTTGGAAAGGGAGGACA+AGG + tig0027929:55278-55297 Msa1436400:CDS 45.0%
! ATTTGATCGACACTTTGGGG+GGG - tig0027929:55455-55474 None:intergenic 45.0%
CATTTGATCGACACTTTGGG+GGG - tig0027929:55456-55475 None:intergenic 45.0%
CGAAGTGAGAAACTACTTGC+AGG + tig0027929:55496-55515 Msa1436400:CDS 45.0%
GACAACGTCCGTTTAAGTCA+TGG - tig0027929:55742-55761 None:intergenic 45.0%
CCCCTAGCAATTGTACTCAT+TGG + tig0027929:55815-55834 Msa1436400:CDS 45.0%
ATTCGACAATGGATGGCTGA+AGG + tig0027929:56037-56056 Msa1436400:CDS 45.0%
TTCGACAATGGATGGCTGAA+GGG + tig0027929:56038-56057 Msa1436400:CDS 45.0%
GGCTGAAGGGTTTGTGAAAA+AGG + tig0027929:56051-56070 Msa1436400:CDS 45.0%
ACATCGGAAGATGTTGCAGA+TGG + tig0027929:56085-56104 Msa1436400:CDS 45.0%
!! GGAAAGCATTGAAAGCTCAC+AGG + tig0027929:56327-56346 Msa1436400:CDS 45.0%
!! GTGCTTGATTTGGAGCATGT+TGG + tig0027929:56424-56443 Msa1436400:CDS 45.0%
! TTGAGCATGCCAATGGCTTT+TGG - tig0027929:56541-56560 None:intergenic 45.0%
TAGGTTCTTGAGCATGCCAA+TGG - tig0027929:56548-56567 None:intergenic 45.0%
GCTCAAGAACCTAGAAACCT+TGG + tig0027929:56555-56574 Msa1436400:CDS 45.0%
!! TGGTGGTGGTGAAAATGAAG+TGG + tig0027929:56732-56751 Msa1436400:CDS 45.0%
GTAAGATGTCGAAGCAAAGG+TGG - tig0027929:56937-56956 None:intergenic 45.0%
AGTTAGAGATGTTGCCTGTG+TGG + tig0027929:56968-56987 Msa1436400:CDS 45.0%
AGAGAGAGGGTCAACAAGTT+TGG - tig0027929:57078-57097 None:intergenic 45.0%
AGCTGATGCTGAAGAAGACA+TGG + tig0027929:54857-54876 Msa1436400:CDS 45.0%
CAACATGGAGAACCTTCGAA+AGG + tig0027929:55151-55170 Msa1436400:CDS 45.0%
TTGTCCTCCCTTTCCAACAA+TGG - tig0027929:55279-55298 None:intergenic 45.0%
ATTGTTGGAAAGGGAGGACA+AGG + tig0027929:55278-55297 Msa1436400:CDS 45.0%
! ATTTGATCGACACTTTGGGG+GGG - tig0027929:55455-55474 None:intergenic 45.0%
CATTTGATCGACACTTTGGG+GGG - tig0027929:55456-55475 None:intergenic 45.0%
CGAAGTGAGAAACTACTTGC+AGG + tig0027929:55496-55515 Msa1436400:CDS 45.0%
GACAACGTCCGTTTAAGTCA+TGG - tig0027929:55742-55761 None:intergenic 45.0%
CCCCTAGCAATTGTACTCAT+TGG + tig0027929:55815-55834 Msa1436400:CDS 45.0%
ATTCGACAATGGATGGCTGA+AGG + tig0027929:56037-56056 Msa1436400:CDS 45.0%
TTCGACAATGGATGGCTGAA+GGG + tig0027929:56038-56057 Msa1436400:CDS 45.0%
GGCTGAAGGGTTTGTGAAAA+AGG + tig0027929:56051-56070 Msa1436400:CDS 45.0%
ACATCGGAAGATGTTGCAGA+TGG + tig0027929:56085-56104 Msa1436400:CDS 45.0%
!! GGAAAGCATTGAAAGCTCAC+AGG + tig0027929:56327-56346 Msa1436400:CDS 45.0%
!! GTGCTTGATTTGGAGCATGT+TGG + tig0027929:56424-56443 Msa1436400:CDS 45.0%
! TTGAGCATGCCAATGGCTTT+TGG - tig0027929:56541-56560 None:intergenic 45.0%
TAGGTTCTTGAGCATGCCAA+TGG - tig0027929:56548-56567 None:intergenic 45.0%
GCTCAAGAACCTAGAAACCT+TGG + tig0027929:56555-56574 Msa1436400:CDS 45.0%
!! TGGTGGTGGTGAAAATGAAG+TGG + tig0027929:56732-56751 Msa1436400:CDS 45.0%
GTAAGATGTCGAAGCAAAGG+TGG - tig0027929:56937-56956 None:intergenic 45.0%
AGTTAGAGATGTTGCCTGTG+TGG + tig0027929:56968-56987 Msa1436400:CDS 45.0%
AGAGAGAGGGTCAACAAGTT+TGG - tig0027929:57078-57097 None:intergenic 45.0%
GTCACCATTGTTGGAAAGGG+AGG + tig0027929:55272-55291 Msa1436400:CDS 50.0%
!! GTCTTGATCGGTGTTAGGAG+CGG + tig0027929:56802-56821 Msa1436400:CDS 50.0%
AGATGTCGAAGCAAAGGTGG+TGG - tig0027929:56934-56953 None:intergenic 50.0%
GTCACCATTGTTGGAAAGGG+AGG + tig0027929:55272-55291 Msa1436400:CDS 50.0%
!! GTCTTGATCGGTGTTAGGAG+CGG + tig0027929:56802-56821 Msa1436400:CDS 50.0%
AGATGTCGAAGCAAAGGTGG+TGG - tig0027929:56934-56953 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
tig0027929 gene 54771 57158 54771 ID=Msa1436400;Name=Msa1436400
tig0027929 mRNA 54771 57158 54771 ID=Msa1436400-mRNA-1;Parent=Msa1436400;Name=Msa1436400-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|796
tig0027929 exon 54771 57158 54771 ID=Msa1436400-mRNA-1:exon:10205;Parent=Msa1436400-mRNA-1
tig0027929 CDS 54771 57158 54771 ID=Msa1436400-mRNA-1:cds;Parent=Msa1436400-mRNA-1
Gene Sequence

>Msa1436400

ATGATTAGGGGTATCCCAAAAGAAATTTCAGACATGAAAGATGAACTTGAAAGCATTGAAAACTTCATCAACAATGCAGATAGAATAGCTGATGCTGAAGAAGACATGGAAACAAAACAGGAAATCAAAGGAAAGATCAAACAGCTGATAGAAGCATCTTTTCACATAGAAGATGTCATTGATGAATATATGTTTTGTCAAGAACAACCTTCTGGATTTGCTAACTTGGTCAAAACTATAATTCTTCGTCGCCAAATAGCAAACAAGATTCAGAAAATCAAATCCCAAATTAGTGATATGAATGATGCAAGTGGAAAAGAACATAGCTTCCATATTCAATCATCTTTGGAACAAGGGTCAAGCAGTACTGCAACAAATTTCAACATGGAGAACCTTCGAAAGGCTCAATTTTGTATGGATGAAGATGATGTCGTAGGCTTTGAAGTTCCAAGAGACATACTAATTGATTGGTTGGTAGAGGGAAGAGAAGCGCACACAATTGTCACCATTGTTGGAAAGGGAGGACAAGGAAAAACTACTCTTGCCAAGAAGGTTTTTGACGACAACAAGATCGTTAAACACTTTGATTGTCATGTATGGATCAGAGTGTCTCAATCATACAATATAGAAGGCTTGCTGAGGGACATGTTGCACAAGTTTTACGAACAACAAGGAGCAAATCCCCCCCAAAGTGTCGATCAAATGACTCAAGAGTCATTAGTTGACGAAGTGAGAAACTACTTGCAGGAAAAAAGGTACGTTATCGTGTTTGATGATGTATGGAATTCACAATTTTGGGATGATATCAAACTTGCCATGATTGATAATAAAAAGGGCTGTAAGATATTAATCACAACAAGAAACATTGATGTTGTAAATGTTTGTAAGAAATCTTCTTTTGTTGAAGTGTATGAACTGAAAGGTTTGGCTGAAGAACAATCTTTGGAGTTGTTCAATAAGAAGACATTCCATGACTTAAACGGACGTTGTCCAGAAAATCTTATTGATATATCTTTGAAAATTGTTGAAAAATGCAATGGTTTACCCCTAGCAATTGTACTCATTGGTGGTATTTTATCTTGCAAAGATAGAAATACACAAGAATGGTATAACTTTAGTGAAAATCTCAACATAGAGTTAGATGAAGATTTGAAGATAAACAAAATTGTAGGTCTCGGTTACCATGATTTGTCTTACAATCTCAAGTCATGTTTGTTGTATTTTGGATTATATCCTGAAGGTTGTATAATTCCTTCAAAGATATTAATTCGACAATGGATGGCTGAAGGGTTTGTGAAAAAGGATAGGGTAAAAACATCGGAAGATGTTGCAGATGGATATTTAGCAGATTTGATCGGTAGAGGTTTGGTGCAAGTAGTTTCAATCAGTATTGATGGAAGAGCAAAAAGTTGTTGTGTTCATGATCTAGTGCATGCATTGATTCTTAAAAAATGTGAAGAATTAAGTTTTTGCAAGAATATTAGCGAGGATGACCAATCATTTTTAACTGGGATGGTTCGACGCCTATCAATAGCAATTAGATCTGATAATTTGATGGAAAGCATTGAAAGCTCACAGGTTCGATCACTGCTTGTTAAAACATTAAATGAATCCCTTGCAAGAAGAATCCCTACAAAATACAGGCGATTGAATGTGCTTGATTTGGAGCATGTTGGATTGCTTGATGTTCCTCAAGATTTTGGAAGTTTGACCCACTTAAAGTATTTTAGATTTAGAGAGAACTTTCGAGGAGATCGTTGTGTACTTCCAAAAGCCATTGGCATGCTCAAGAACCTAGAAACCTTGGACTTACAACGTACAAGTTTCCAAGCTATGCCAAAAGAGATATGCAAGCTTAAAAAGCTACGCCATTTTCTAGGCTACAGTATGTCTTTGATTCAATTAAAAGATGGTATCGGAGGCATGACATCCCTACAAACTCTACGTGATGTTTATTTAGATGGTGGTGGTGAAAATGAAGTGGTAAAGCTAATCCAAGAGCTAGGAAAACTAAAACAGCTAAGGGAATTGGTCTTGATCGGTGTTAGGAGCGGATACATGAGTGCTATATCTTCCTCAATCAATGAGATGCAAAAAATGGAGAAACTACAAATTCGTGCAAACGGATATAACACGGTTATTGACATGCATTTGAATTCACCACCACCTTTGCTTCGACATCTTACTCTTGATGGGAAGTTAGAGATGTTGCCTGTGTGGATTCCAAAACTTCAAAATCTTGTTAAGCTGAAACTCAAGTATTCCCAACTAACAGATGATAAAATGAAATTACTCAAAAGTATGCCAAACTTGTTGACCCTCTCTCTTAGCAACAATGCTTATGAAGCTGAAAGGTTACATTTTCAAGATGGATGGTTTGAGAATTTG

Protein sequence

>Msa1436400

MIRGIPKEISDMKDELESIENFINNADRIADAEEDMETKQEIKGKIKQLIEASFHIEDVIDEYMFCQEQPSGFANLVKTIILRRQIANKIQKIKSQISDMNDASGKEHSFHIQSSLEQGSSSTATNFNMENLRKAQFCMDEDDVVGFEVPRDILIDWLVEGREAHTIVTIVGKGGQGKTTLAKKVFDDNKIVKHFDCHVWIRVSQSYNIEGLLRDMLHKFYEQQGANPPQSVDQMTQESLVDEVRNYLQEKRYVIVFDDVWNSQFWDDIKLAMIDNKKGCKILITTRNIDVVNVCKKSSFVEVYELKGLAEEQSLELFNKKTFHDLNGRCPENLIDISLKIVEKCNGLPLAIVLIGGILSCKDRNTQEWYNFSENLNIELDEDLKINKIVGLGYHDLSYNLKSCLLYFGLYPEGCIIPSKILIRQWMAEGFVKKDRVKTSEDVADGYLADLIGRGLVQVVSISIDGRAKSCCVHDLVHALILKKCEELSFCKNISEDDQSFLTGMVRRLSIAIRSDNLMESIESSQVRSLLVKTLNESLARRIPTKYRRLNVLDLEHVGLLDVPQDFGSLTHLKYFRFRENFRGDRCVLPKAIGMLKNLETLDLQRTSFQAMPKEICKLKKLRHFLGYSMSLIQLKDGIGGMTSLQTLRDVYLDGGGENEVVKLIQELGKLKQLRELVLIGVRSGYMSAISSSINEMQKMEKLQIRANGYNTVIDMHLNSPPPLLRHLTLDGKLEMLPVWIPKLQNLVKLKLKYSQLTDDKMKLLKSMPNLLTLSLSNNAYEAERLHFQDGWFENL