Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0286360 | GAU49928.1 | 92.040 | 201 | 16 | 0 | 1 | 201 | 1 | 201 | 5.07e-133 | 381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0286360 | sp|C6TG62|CSPL9_SOYBN | 69.231 | 195 | 59 | 1 | 1 | 195 | 1 | 194 | 1.14e-98 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0286360 | A0A2Z6P0I7 | 92.040 | 201 | 16 | 0 | 1 | 201 | 1 | 201 | 2.42e-133 | 381 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006480 | Msa0286360 | 0.820719 | 5.910879e-53 | -8.615850e-47 |
| Msa0015950 | Msa0286360 | 0.824853 | 6.443659e-54 | -8.615850e-47 |
| Msa0015960 | Msa0286360 | 0.816201 | 6.247848e-52 | -8.615850e-47 |
| Msa0016070 | Msa0286360 | 0.820836 | 5.556613e-53 | -8.615850e-47 |
| Msa0016080 | Msa0286360 | 0.826347 | 2.851355e-54 | -8.615850e-47 |
| Msa0024650 | Msa0286360 | 0.825826 | 3.792466e-54 | -8.615850e-47 |
| Msa0025570 | Msa0286360 | 0.844107 | 9.276576e-59 | -8.615850e-47 |
| Msa0028690 | Msa0286360 | 0.850802 | 1.341949e-60 | -8.615850e-47 |
| Msa0041630 | Msa0286360 | 0.825749 | 3.956167e-54 | -8.615850e-47 |
| Msa0060410 | Msa0286360 | 0.853813 | 1.864223e-61 | -8.615850e-47 |
| Msa0073110 | Msa0286360 | 0.828621 | 8.121756e-55 | -8.615850e-47 |
| Msa0089190 | Msa0286360 | 0.828138 | 1.062039e-54 | -8.615850e-47 |
| Msa0095940 | Msa0286360 | 0.802831 | 4.655373e-49 | -8.615850e-47 |
| Msa0098380 | Msa0286360 | 0.809737 | 1.632015e-50 | -8.615850e-47 |
| Msa0101530 | Msa0286360 | 0.816159 | 6.384091e-52 | -8.615850e-47 |
| Msa0117650 | Msa0286360 | 0.841624 | 4.243804e-58 | -8.615850e-47 |
| Msa0119240 | Msa0286360 | 0.845991 | 2.874957e-59 | -8.615850e-47 |
| Msa0120450 | Msa0286360 | 0.800823 | 1.203107e-48 | -8.615850e-47 |
| Msa0136000 | Msa0286360 | 0.844396 | 7.760124e-59 | -8.615850e-47 |
| Msa0163670 | Msa0286360 | 0.812958 | 3.262845e-51 | -8.615850e-47 |
| Msa0163690 | Msa0286360 | 0.825218 | 5.285065e-54 | -8.615850e-47 |
| Msa0168750 | Msa0286360 | 0.846075 | 2.728064e-59 | -8.615850e-47 |
| Msa0189990 | Msa0286360 | 0.873864 | 1.056727e-67 | -8.615850e-47 |
| Msa0218500 | Msa0286360 | 0.842194 | 3.001159e-58 | -8.615850e-47 |
| Msa0247780 | Msa0286360 | 0.834534 | 2.835449e-56 | -8.615850e-47 |
| Msa0258260 | Msa0286360 | 0.825089 | 5.669558e-54 | -8.615850e-47 |
| Msa0258740 | Msa0286360 | 0.801398 | 9.177560e-49 | -8.615850e-47 |
| Msa0265650 | Msa0286360 | 0.816424 | 5.569262e-52 | -8.615850e-47 |
| Msa0275730 | Msa0286360 | 0.802015 | 6.855983e-49 | -8.615850e-47 |
| Msa0278960 | Msa0286360 | 0.805296 | 1.429559e-49 | -8.615850e-47 |
| Msa0280160 | Msa0286360 | 0.801952 | 7.062611e-49 | -8.615850e-47 |
| Msa0282830 | Msa0286360 | 0.801401 | 9.161531e-49 | -8.615850e-47 |
| Msa0285890 | Msa0286360 | 0.804138 | 2.494493e-49 | -8.615850e-47 |
| Msa0286360 | Msa0287480 | 0.802532 | 5.365568e-49 | -8.615850e-47 |
| Msa0286360 | Msa0297340 | 0.828836 | 7.203348e-55 | -8.615850e-47 |
| Msa0286360 | Msa0298000 | 0.821338 | 4.256940e-53 | -8.615850e-47 |
| Msa0286360 | Msa0303900 | 0.820413 | 6.951608e-53 | -8.615850e-47 |
| Msa0286360 | Msa0307630 | 0.805772 | 1.136000e-49 | -8.615850e-47 |
| Msa0286360 | Msa0307740 | 0.857317 | 1.772154e-62 | -8.615850e-47 |
| Msa0286360 | Msa0320170 | 0.825976 | 3.494941e-54 | -8.615850e-47 |
| Msa0286360 | Msa0325260 | 0.829705 | 4.431655e-55 | -8.615850e-47 |
| Msa0286360 | Msa0333770 | 0.821621 | 3.663392e-53 | -8.615850e-47 |
| Msa0286360 | Msa0354600 | 0.801407 | 9.138126e-49 | -8.615850e-47 |
| Msa0286360 | Msa0356180 | 0.810885 | 9.228653e-51 | -8.615850e-47 |
| Msa0286360 | Msa0356240 | 0.802356 | 5.831264e-49 | -8.615850e-47 |
| Msa0286360 | Msa0356270 | 0.823460 | 1.368675e-53 | -8.615850e-47 |
| Msa0286360 | Msa0356360 | 0.814337 | 1.621806e-51 | -8.615850e-47 |
| Msa0286360 | Msa0364900 | 0.811433 | 7.019345e-51 | -8.615850e-47 |
| Msa0286360 | Msa0375620 | 0.805530 | 1.277048e-49 | -8.615850e-47 |
| Msa0286360 | Msa0418230 | 0.805799 | 1.121422e-49 | -8.615850e-47 |
| Msa0286360 | Msa0434300 | 0.805422 | 1.345329e-49 | -8.615850e-47 |
| Msa0286360 | Msa0449380 | 0.823193 | 1.580043e-53 | -8.615850e-47 |
| Msa0286360 | Msa0449940 | 0.811049 | 8.501126e-51 | -8.615850e-47 |
| Msa0286360 | Msa0459930 | 0.808015 | 3.811636e-50 | -8.615850e-47 |
| Msa0286360 | Msa0464620 | 0.832960 | 7.015590e-56 | -8.615850e-47 |
| Msa0286360 | Msa0480900 | -0.806559 | 7.757466e-50 | -8.615850e-47 |
| Msa0286360 | Msa0510050 | 0.805699 | 1.177014e-49 | -8.615850e-47 |
| Msa0286360 | Msa0517200 | 0.802815 | 4.689736e-49 | -8.615850e-47 |
| Msa0286360 | Msa0522140 | 0.812206 | 4.763707e-51 | -8.615850e-47 |
| Msa0286360 | Msa0522170 | 0.801245 | 9.860485e-49 | -8.615850e-47 |
| Msa0286360 | Msa0529110 | 0.814583 | 1.431172e-51 | -8.615850e-47 |
| Msa0286360 | Msa0531050 | 0.824215 | 9.108301e-54 | -8.615850e-47 |
| Msa0286360 | Msa0540640 | 0.821701 | 3.511081e-53 | -8.615850e-47 |
| Msa0286360 | Msa0547370 | 0.865970 | 4.012251e-65 | -8.615850e-47 |
| Msa0286360 | Msa0557240 | 0.821727 | 3.462458e-53 | -8.615850e-47 |
| Msa0286360 | Msa0557250 | 0.800692 | 1.279459e-48 | -8.615850e-47 |
| Msa0286360 | Msa0561830 | 0.802750 | 4.838259e-49 | -8.615850e-47 |
| Msa0286360 | Msa0566280 | 0.857418 | 1.654549e-62 | -8.615850e-47 |
| Msa0286360 | Msa0566490 | 0.812039 | 5.179684e-51 | -8.615850e-47 |
| Msa0286360 | Msa0567330 | 0.821193 | 4.599001e-53 | -8.615850e-47 |
| Msa0286360 | Msa0567570 | 0.811922 | 5.494616e-51 | -8.615850e-47 |
| Msa0286360 | Msa0576320 | 0.806065 | 9.858288e-50 | -8.615850e-47 |
| Msa0286360 | Msa0581350 | 0.815620 | 8.421540e-52 | -8.615850e-47 |
| Msa0286360 | Msa0588040 | 0.827127 | 1.857253e-54 | -8.615850e-47 |
| Msa0286360 | Msa0590620 | -0.834729 | 2.532043e-56 | -8.615850e-47 |
| Msa0286360 | Msa0595270 | 0.815339 | 9.727210e-52 | -8.615850e-47 |
| Msa0286360 | Msa0597800 | 0.800035 | 1.740711e-48 | -8.615850e-47 |
| Msa0286360 | Msa0597820 | 0.822093 | 2.847628e-53 | -8.615850e-47 |
| Msa0286360 | Msa0602100 | 0.837921 | 3.907595e-57 | -8.615850e-47 |
| Msa0286360 | Msa0603310 | 0.825801 | 3.845760e-54 | -8.615850e-47 |
| Msa0286360 | Msa0643230 | 0.835502 | 1.616584e-56 | -8.615850e-47 |
| Msa0286360 | Msa0644330 | 0.810294 | 1.238457e-50 | -8.615850e-47 |
| Msa0286360 | Msa0644340 | 0.801342 | 9.419168e-49 | -8.615850e-47 |
| Msa0286360 | Msa0650550 | 0.800874 | 1.174162e-48 | -8.615850e-47 |
| Msa0286360 | Msa0655370 | 0.800760 | 1.238827e-48 | -8.615850e-47 |
| Msa0286360 | Msa0657710 | 0.804362 | 2.239900e-49 | -8.615850e-47 |
| Msa0286360 | Msa0658150 | 0.862584 | 4.568292e-64 | -8.615850e-47 |
| Msa0286360 | Msa0659230 | 0.816162 | 6.373018e-52 | -8.615850e-47 |
| Msa0286360 | Msa0661410 | 0.811484 | 6.841834e-51 | -8.615850e-47 |
| Msa0286360 | Msa0661420 | 0.811632 | 6.351753e-51 | -8.615850e-47 |
| Msa0286360 | Msa0680460 | 0.805706 | 1.172986e-49 | -8.615850e-47 |
| Msa0286360 | Msa0682110 | 0.836856 | 7.324291e-57 | -8.615850e-47 |
| Msa0286360 | Msa0682160 | 0.830194 | 3.369676e-55 | -8.615850e-47 |
| Msa0286360 | Msa0682910 | 0.847131 | 1.404163e-59 | -8.615850e-47 |
| Msa0286360 | Msa0686830 | 0.800550 | 1.367241e-48 | -8.615850e-47 |
| Msa0286360 | Msa0699170 | 0.813526 | 2.447926e-51 | -8.615850e-47 |
| Msa0286360 | Msa0702800 | 0.808976 | 2.376582e-50 | -8.615850e-47 |
| Msa0286360 | Msa0703000 | 0.864409 | 1.241267e-64 | -8.615850e-47 |
| Msa0286360 | Msa0707330 | 0.822479 | 2.317078e-53 | -8.615850e-47 |
| Msa0286360 | Msa0716980 | 0.805702 | 1.175030e-49 | -8.615850e-47 |
| Msa0286360 | Msa0717030 | 0.803891 | 2.807162e-49 | -8.615850e-47 |
| Msa0286360 | Msa0719600 | 0.828076 | 1.099122e-54 | -8.615850e-47 |
| Msa0286360 | Msa0734080 | 0.807780 | 4.277060e-50 | -8.615850e-47 |
| Msa0286360 | Msa0734100 | 0.810673 | 1.025593e-50 | -8.615850e-47 |
| Msa0286360 | Msa0736920 | 0.807389 | 5.177009e-50 | -8.615850e-47 |
| Msa0286360 | Msa0743370 | 0.831629 | 1.497840e-55 | -8.615850e-47 |
| Msa0286360 | Msa0744710 | 0.804642 | 1.958316e-49 | -8.615850e-47 |
| Msa0286360 | Msa0750830 | 0.800213 | 1.601665e-48 | -8.615850e-47 |
| Msa0286360 | Msa0763370 | 0.809457 | 1.874067e-50 | -8.615850e-47 |
| Msa0286360 | Msa0769540 | 0.843340 | 1.487753e-58 | -8.615850e-47 |
| Msa0286360 | Msa0773030 | 0.869935 | 2.132850e-66 | -8.615850e-47 |
| Msa0286360 | Msa0778570 | 0.808954 | 2.403143e-50 | -8.615850e-47 |
| Msa0286360 | Msa0792410 | 0.805110 | 1.563924e-49 | -8.615850e-47 |
| Msa0286360 | Msa0794100 | 0.803328 | 3.673256e-49 | -8.615850e-47 |
| Msa0286360 | Msa0800120 | 0.821009 | 5.069431e-53 | -8.615850e-47 |
| Msa0286360 | Msa0800150 | 0.834758 | 2.490670e-56 | -8.615850e-47 |
| Msa0286360 | Msa0800180 | 0.816356 | 5.767479e-52 | -8.615850e-47 |
| Msa0286360 | Msa0810330 | 0.869398 | 3.189678e-66 | -8.615850e-47 |
| Msa0286360 | Msa0812720 | 0.850566 | 1.562724e-60 | -8.615850e-47 |
| Msa0286360 | Msa0815940 | 0.802136 | 6.473592e-49 | -8.615850e-47 |
| Msa0286360 | Msa0823480 | -0.812644 | 3.821616e-51 | -8.615850e-47 |
| Msa0286360 | Msa0826240 | 0.806176 | 9.338671e-50 | -8.615850e-47 |
| Msa0286360 | Msa0831310 | 0.824895 | 6.299891e-54 | -8.615850e-47 |
| Msa0286360 | Msa0833270 | 0.802017 | 6.848997e-49 | -8.615850e-47 |
| Msa0286360 | Msa0838210 | 0.804081 | 2.563465e-49 | -8.615850e-47 |
| Msa0286360 | Msa0841090 | 0.804061 | 2.588474e-49 | -8.615850e-47 |
| Msa0286360 | Msa0850640 | 0.876851 | 1.004742e-68 | -8.615850e-47 |
| Msa0286360 | Msa0873910 | 0.803747 | 3.007221e-49 | -8.615850e-47 |
| Msa0286360 | Msa0901270 | 0.838538 | 2.710382e-57 | -8.615850e-47 |
| Msa0286360 | Msa0901290 | 0.808520 | 2.974668e-50 | -8.615850e-47 |
| Msa0286360 | Msa0904590 | 0.819649 | 1.039448e-52 | -8.615850e-47 |
| Msa0286360 | Msa0906660 | 0.802087 | 6.625178e-49 | -8.615850e-47 |
| Msa0286360 | Msa0907880 | 0.858587 | 7.439145e-63 | -8.615850e-47 |
| Msa0286360 | Msa0909260 | 0.800072 | 1.711099e-48 | -8.615850e-47 |
| Msa0286360 | Msa0945890 | 0.803208 | 3.890425e-49 | -8.615850e-47 |
| Msa0286360 | Msa0946330 | 0.818396 | 2.003801e-52 | -8.615850e-47 |
| Msa0286360 | Msa0966590 | 0.817040 | 4.052634e-52 | -8.615850e-47 |
| Msa0286360 | Msa0975950 | 0.802103 | 6.573985e-49 | -8.615850e-47 |
| Msa0286360 | Msa1001120 | 0.833874 | 4.150379e-56 | -8.615850e-47 |
| Msa0286360 | Msa1015360 | 0.807599 | 4.672477e-50 | -8.615850e-47 |
| Msa0286360 | Msa1019420 | 0.828613 | 8.157926e-55 | -8.615850e-47 |
| Msa0286360 | Msa1027400 | 0.800605 | 1.332777e-48 | -8.615850e-47 |
| Msa0286360 | Msa1029860 | 0.805367 | 1.381398e-49 | -8.615850e-47 |
| Msa0286360 | Msa1034950 | 0.803642 | 3.162070e-49 | -8.615850e-47 |
| Msa0286360 | Msa1035050 | 0.819844 | 9.380112e-53 | -8.615850e-47 |
| Msa0286360 | Msa1075010 | 0.802781 | 4.766194e-49 | -8.615850e-47 |
| Msa0286360 | Msa1075090 | 0.811354 | 7.299592e-51 | -8.615850e-47 |
| Msa0286360 | Msa1077970 | 0.812966 | 3.248750e-51 | -8.615850e-47 |
| Msa0286360 | Msa1087210 | 0.813434 | 2.564840e-51 | -8.615850e-47 |
| Msa0286360 | Msa1089990 | 0.827936 | 1.187694e-54 | -8.615850e-47 |
| Msa0286360 | Msa1092310 | 0.818091 | 2.348197e-52 | -8.615850e-47 |
| Msa0286360 | Msa1094810 | 0.800065 | 1.716687e-48 | -8.615850e-47 |
| Msa0286360 | Msa1107220 | 0.825626 | 4.230243e-54 | -8.615850e-47 |
| Msa0286360 | Msa1107250 | 0.803965 | 2.709479e-49 | -8.615850e-47 |
| Msa0286360 | Msa1115980 | 0.807194 | 5.692917e-50 | -8.615850e-47 |
| Msa0286360 | Msa1140930 | 0.800112 | 1.678837e-48 | -8.615850e-47 |
| Msa0286360 | Msa1150760 | 0.803683 | 3.100557e-49 | -8.615850e-47 |
| Msa0286360 | Msa1154060 | 0.808715 | 2.702976e-50 | -8.615850e-47 |
| Msa0286360 | Msa1154320 | 0.807122 | 5.898597e-50 | -8.615850e-47 |
| Msa0286360 | Msa1162430 | 0.817481 | 3.224258e-52 | -8.615850e-47 |
| Msa0286360 | Msa1202110 | 0.813045 | 3.121403e-51 | -8.615850e-47 |
| Msa0286360 | Msa1202800 | 0.846076 | 2.725739e-59 | -8.615850e-47 |
| Msa0286360 | Msa1203440 | 0.818121 | 2.311964e-52 | -8.615850e-47 |
| Msa0286360 | Msa1203650 | 0.808898 | 2.469649e-50 | -8.615850e-47 |
| Msa0286360 | Msa1211940 | 0.874300 | 7.524664e-68 | -8.615850e-47 |
| Msa0286360 | Msa1212080 | 0.859408 | 4.221779e-63 | -8.615850e-47 |
| Msa0286360 | Msa1221270 | 0.822373 | 2.452450e-53 | -8.615850e-47 |
| Msa0286360 | Msa1223710 | 0.806862 | 6.694570e-50 | -8.615850e-47 |
| Msa0286360 | Msa1223990 | 0.811036 | 8.557792e-51 | -8.615850e-47 |
| Msa0286360 | Msa1238190 | 0.813983 | 1.941463e-51 | -8.615850e-47 |
| Msa0286360 | Msa1241960 | 0.802450 | 5.577295e-49 | -8.615850e-47 |
| Msa0286360 | Msa1242160 | 0.806909 | 6.540598e-50 | -8.615850e-47 |
| Msa0286360 | Msa1254870 | 0.814832 | 1.260536e-51 | -8.615850e-47 |
| Msa0286360 | Msa1255210 | 0.825055 | 5.773842e-54 | -8.615850e-47 |
| Msa0286360 | Msa1263110 | 0.803027 | 4.240928e-49 | -8.615850e-47 |
| Msa0286360 | Msa1268360 | 0.821776 | 3.372317e-53 | -8.615850e-47 |
| Msa0286360 | Msa1268390 | 0.810603 | 1.061609e-50 | -8.615850e-47 |
| Msa0286360 | Msa1268420 | 0.805823 | 1.108309e-49 | -8.615850e-47 |
| Msa0286360 | Msa1269200 | 0.834420 | 3.029155e-56 | -8.615850e-47 |
| Msa0286360 | Msa1273320 | 0.802775 | 4.781351e-49 | -8.615850e-47 |
| Msa0286360 | Msa1284020 | 0.832389 | 9.720192e-56 | -8.615850e-47 |
| Msa0286360 | Msa1295650 | 0.824045 | 9.985967e-54 | -8.615850e-47 |
| Msa0286360 | Msa1322960 | 0.812607 | 3.894445e-51 | -8.615850e-47 |
| Msa0286360 | Msa1323010 | 0.816822 | 4.534971e-52 | -8.615850e-47 |
| Msa0286360 | Msa1323070 | 0.808217 | 3.452650e-50 | -8.615850e-47 |
| Msa0286360 | Msa1328430 | 0.815235 | 1.025539e-51 | -8.615850e-47 |
| Msa0286360 | Msa1331570 | -0.801355 | 9.362655e-49 | -8.615850e-47 |
| Msa0286360 | Msa1343600 | 0.806552 | 7.784528e-50 | -8.615850e-47 |
| Msa0286360 | Msa1344450 | 0.857222 | 1.891236e-62 | -8.615850e-47 |
| Msa0286360 | Msa1376880 | 0.807401 | 5.145672e-50 | -8.615850e-47 |
| Msa0286360 | Msa1384130 | 0.845134 | 4.907442e-59 | -8.615850e-47 |
| Msa0286360 | Msa1393730 | 0.803317 | 3.693356e-49 | -8.615850e-47 |
| Msa0286360 | Msa1395080 | 0.864140 | 1.505748e-64 | -8.615850e-47 |
| Msa0286360 | Msa1404050 | 0.804906 | 1.724872e-49 | -8.615850e-47 |
| Msa0286360 | Msa1405530 | 0.801826 | 7.496173e-49 | -8.615850e-47 |
| Msa0286360 | Msa1407810 | 0.823248 | 1.534380e-53 | -8.615850e-47 |
| Msa0286360 | Msa1413450 | 0.850612 | 1.517765e-60 | -8.615850e-47 |
| Msa0286360 | Msa1416130 | 0.807880 | 4.071361e-50 | -8.615850e-47 |
| Msa0286360 | Msa1417220 | 0.806304 | 8.777038e-50 | -8.615850e-47 |
| Msa0286360 | Msa1430950 | 0.858710 | 6.831854e-63 | -8.615850e-47 |
| Msa0286360 | Msa1433040 | 0.843761 | 1.148523e-58 | -8.615850e-47 |
| Msa0286360 | Msa1433360 | 0.836813 | 7.509149e-57 | -8.615850e-47 |
| Msa0286360 | Msa1437590 | 0.800387 | 1.475778e-48 | -8.615850e-47 |
| Msa0286360 | Msa1437780 | 0.823923 | 1.066455e-53 | -8.615850e-47 |
| Msa0286360 | Msa1439250 | 0.806058 | 9.889816e-50 | -8.615850e-47 |
| Msa0286360 | Msa1445530 | 0.820340 | 7.224614e-53 | -8.615850e-47 |
| Msa0286360 | Msa1462610 | 0.807521 | 4.853341e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0286360 | MtrunA17_Chr2g0303151 | 95.025 | 201 | 10 | 0 | 1 | 201 | 1 | 201 | 3.97e-133 | 371 |
| Msa0286360 | MtrunA17_Chr8g0381001 | 73.711 | 194 | 50 | 1 | 1 | 194 | 1 | 193 | 1.04e-95 | 276 |
| Msa0286360 | MtrunA17_Chr4g0066721 | 37.671 | 146 | 85 | 3 | 29 | 171 | 35 | 177 | 1.58e-23 | 92.8 |
| Msa0286360 | MtrunA17_Chr7g0268681 | 31.609 | 174 | 112 | 3 | 17 | 189 | 18 | 185 | 3.28e-21 | 86.7 |
| Msa0286360 | MtrunA17_Chr4g0021111 | 32.927 | 164 | 94 | 2 | 29 | 192 | 10 | 157 | 2.10e-20 | 83.6 |
| Msa0286360 | MtrunA17_Chr2g0286341 | 28.659 | 164 | 106 | 3 | 31 | 189 | 27 | 184 | 1.77e-15 | 71.2 |
| Msa0286360 | MtrunA17_Chr7g0217691 | 27.957 | 186 | 121 | 3 | 6 | 188 | 10 | 185 | 1.96e-13 | 65.9 |
| Msa0286360 | MtrunA17_Chr4g0042551 | 27.742 | 155 | 105 | 1 | 31 | 185 | 63 | 210 | 5.22e-13 | 65.1 |
| Msa0286360 | MtrunA17_Chr5g0417761 | 30.323 | 155 | 101 | 1 | 31 | 185 | 32 | 179 | 4.71e-11 | 59.3 |
| Msa0286360 | MtrunA17_Chr7g0251531 | 26.415 | 159 | 99 | 3 | 31 | 184 | 34 | 179 | 7.57e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0286360 | AT5G44550.1 | 58.721 | 172 | 71 | 0 | 23 | 194 | 14 | 185 | 6.39e-66 | 201 |
| Msa0286360 | AT4G20390.1 | 55.294 | 170 | 75 | 1 | 22 | 190 | 12 | 181 | 1.31e-53 | 170 |
| Msa0286360 | AT4G15620.1 | 29.570 | 186 | 124 | 4 | 5 | 189 | 10 | 189 | 2.84e-18 | 79.3 |
| Msa0286360 | AT4G15630.1 | 28.022 | 182 | 125 | 3 | 9 | 189 | 13 | 189 | 1.47e-17 | 77.4 |
| Msa0286360 | AT1G03700.1 | 28.049 | 164 | 102 | 3 | 29 | 192 | 11 | 158 | 3.97e-17 | 75.5 |
| Msa0286360 | AT4G15610.1 | 30.556 | 144 | 93 | 3 | 31 | 172 | 33 | 171 | 1.15e-15 | 72.4 |
| Msa0286360 | AT1G14160.1 | 28.387 | 155 | 104 | 1 | 31 | 185 | 55 | 202 | 3.27e-15 | 71.2 |
| Msa0286360 | AT5G15290.1 | 30.070 | 143 | 91 | 3 | 31 | 172 | 32 | 166 | 2.91e-14 | 68.6 |
| Msa0286360 | AT3G06390.1 | 30.075 | 133 | 85 | 3 | 32 | 161 | 42 | 169 | 2.35e-13 | 66.2 |
| Msa0286360 | AT4G03540.1 | 28.244 | 131 | 78 | 3 | 44 | 174 | 26 | 140 | 1.68e-12 | 63.2 |
Find 40 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGGAGTTTGATGAAATT+TGG | 0.209736 | 2_3:+27452259 | None:intergenic |
| GCCCTTATTGCTTCTTTCAT+TGG | 0.228754 | 2_3:-27451439 | Msa0286360:CDS |
| GCAGAAATAGTAGCAGTTAT+TGG | 0.231666 | 2_3:+27452281 | None:intergenic |
| CAGAAATAGTAGCAGTTATT+GGG | 0.254239 | 2_3:+27452282 | None:intergenic |
| AAGTCCTTTGTAATCATATT+GGG | 0.274380 | 2_3:+27451738 | None:intergenic |
| ATGATTGCATTGGATATATT+AGG | 0.293339 | 2_3:-27451763 | Msa0286360:CDS |
| TACAAAATGGCTTCAAGAAA+TGG | 0.318606 | 2_3:-27452476 | None:intergenic |
| GAAGTCCTTTGTAATCATAT+TGG | 0.328703 | 2_3:+27451737 | None:intergenic |
| AGCCAATGAAAGAAGCAATA+AGG | 0.340360 | 2_3:+27451437 | None:intergenic |
| GGTGCCAATAACAAAACTTT+TGG | 0.346894 | 2_3:+27452316 | None:intergenic |
| TTTGAAAGCTATTGCAATAG+AGG | 0.418883 | 2_3:-27451469 | Msa0286360:CDS |
| ATGTCAGCATTGGGAAGAAA+TGG | 0.423404 | 2_3:-27451529 | Msa0286360:CDS |
| GCCAATGAAAGAAGCAATAA+GGG | 0.431019 | 2_3:+27451438 | None:intergenic |
| GGAGCATGGTTAATGCGATT+AGG | 0.431376 | 2_3:+27451364 | None:intergenic |
| GCGATTAGGTTTGAGAAGCT+TGG | 0.466239 | 2_3:+27451378 | None:intergenic |
| ATGCAATCATCACCAAGTTA+TGG | 0.467360 | 2_3:+27451776 | None:intergenic |
| AGCAACATTCATGTCAGCAT+TGG | 0.488005 | 2_3:-27451539 | Msa0286360:CDS |
| GCAACATTCATGTCAGCATT+GGG | 0.495269 | 2_3:-27451538 | Msa0286360:CDS |
| AAATGCTAGTCTCCATAACT+TGG | 0.496794 | 2_3:-27451788 | Msa0286360:CDS |
| TGGTAATTCACATGCAAGAT+GGG | 0.512674 | 2_3:-27451509 | Msa0286360:CDS |
| GCTCTAGCATCGGCTGGAGA+TGG | 0.519268 | 2_3:-27451565 | Msa0286360:CDS |
| ATGGTAATTCACATGCAAGA+TGG | 0.522902 | 2_3:-27451510 | Msa0286360:CDS |
| ATGGAGACTAGCATTTCCAT+TGG | 0.523367 | 2_3:+27451795 | None:intergenic |
| AGGTTCTTTGTGATAGCCAA+TGG | 0.529472 | 2_3:-27451811 | Msa0286360:CDS |
| CACAAGTGTTGCAGCTGCAG+TGG | 0.536886 | 2_3:+27452358 | None:intergenic |
| TGTTAATCATATCAAGGACT+AGG | 0.549879 | 2_3:+27451343 | None:intergenic |
| TAACTTGGTGATGATTGCAT+TGG | 0.550469 | 2_3:-27451773 | Msa0286360:CDS |
| AGGTTTGAGAAGCTTGGCAA+TGG | 0.555323 | 2_3:+27451384 | None:intergenic |
| ACTATGGCTCTAGCATCGGC+TGG | 0.563867 | 2_3:-27451571 | Msa0286360:CDS |
| CTAAAATTGCAATAAATGCA+AGG | 0.578209 | 2_3:+27451713 | None:intergenic |
| GTTAACTATGGCTCTAGCAT+CGG | 0.579904 | 2_3:-27451575 | Msa0286360:CDS |
| AGCTATTGCAATAGAGGTGG+TGG | 0.598102 | 2_3:-27451463 | Msa0286360:CDS |
| TGCAGCTGCAACACTTGTGA+TGG | 0.606205 | 2_3:-27452354 | Msa0286360:CDS |
| CATATCAAGGACTAGGAGCA+TGG | 0.606251 | 2_3:+27451350 | None:intergenic |
| GAAAGCTATTGCAATAGAGG+TGG | 0.619990 | 2_3:-27451466 | Msa0286360:CDS |
| AGTTATTGGGGTGTTACCAA+CGG | 0.622547 | 2_3:+27452295 | None:intergenic |
| AGTCCTTTGTAATCATATTG+GGG | 0.628572 | 2_3:+27451739 | None:intergenic |
| AGAAATAGTAGCAGTTATTG+GGG | 0.633112 | 2_3:+27452283 | None:intergenic |
| GGACCCCAATATGATTACAA+AGG | 0.645480 | 2_3:-27451742 | Msa0286360:CDS |
| GGTGAAGAGAAAGTTGAACG+TGG | 0.756724 | 2_3:-27452455 | Msa0286360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTTTAATTTTTTTCTT+AGG | - | chr2_3:27452174-27452193 | Msa0286360:intron | 10.0% |
| !!! | AGTTTTTTAATTTTTTTCTT+AGG | - | chr2_3:27452174-27452193 | Msa0286360:intron | 10.0% |
| !!! | TTTTTATAGGTAAATATTAG+TGG | + | chr2_3:27451812-27451831 | None:intergenic | 15.0% |
| !!! | TTTTTATAGGTAAATATTAG+TGG | + | chr2_3:27451812-27451831 | None:intergenic | 15.0% |
| !! | AAAGAAAAACAAAGAATGAT+TGG | - | chr2_3:27451409-27451428 | Msa0286360:CDS | 20.0% |
| !!! | AATATTAGTGGTTAATTTGT+CGG | + | chr2_3:27451800-27451819 | None:intergenic | 20.0% |
| !! | TTACCTATAAAAAATGTAAG+AGG | - | chr2_3:27451819-27451838 | Msa0286360:intron | 20.0% |
| !!! | TTTCCTCTTACATTTTTTAT+AGG | + | chr2_3:27451825-27451844 | None:intergenic | 20.0% |
| !!! | ATTTATTGCAATTTTAGACA+TGG | - | chr2_3:27452117-27452136 | Msa0286360:intron | 20.0% |
| !! | AAAGAAAAACAAAGAATGAT+TGG | - | chr2_3:27451409-27451428 | Msa0286360:CDS | 20.0% |
| !!! | AATATTAGTGGTTAATTTGT+CGG | + | chr2_3:27451800-27451819 | None:intergenic | 20.0% |
| !! | TTACCTATAAAAAATGTAAG+AGG | - | chr2_3:27451819-27451838 | Msa0286360:intron | 20.0% |
| !!! | TTTCCTCTTACATTTTTTAT+AGG | + | chr2_3:27451825-27451844 | None:intergenic | 20.0% |
| !!! | ATTTATTGCAATTTTAGACA+TGG | - | chr2_3:27452117-27452136 | Msa0286360:intron | 20.0% |
| !! | ATTGGATTCTTTTATCTCTT+AGG | - | chr2_3:27451427-27451446 | Msa0286360:CDS | 25.0% |
| !! | TTGGATTCTTTTATCTCTTA+GGG | - | chr2_3:27451428-27451447 | Msa0286360:CDS | 25.0% |
| ! | TTAAAAACTTACACAAAAGC+TGG | + | chr2_3:27451585-27451604 | None:intergenic | 25.0% |
| ! | AACGAACATAAATAGAAAAG+AGG | + | chr2_3:27451646-27451665 | None:intergenic | 25.0% |
| !!! | GACACAAAAAAGTTTTATGT+AGG | - | chr2_3:27451732-27451751 | Msa0286360:CDS | 25.0% |
| !!! | ACAAAAAAGTTTTATGTAGG+AGG | - | chr2_3:27451735-27451754 | Msa0286360:CDS | 25.0% |
| !!! | ATATTAGTGGTTAATTTGTC+GGG | + | chr2_3:27451799-27451818 | None:intergenic | 25.0% |
| ! | AATTTCATCGCTTAATTCAA+AGG | - | chr2_3:27451877-27451896 | Msa0286360:intron | 25.0% |
| ! | TTTACATTAACACATCATTG+TGG | - | chr2_3:27451982-27452001 | Msa0286360:intron | 25.0% |
| ! | TTACATTAACACATCATTGT+GGG | - | chr2_3:27451983-27452002 | Msa0286360:intron | 25.0% |
| ! | ATGATTGCATTGGATATATT+AGG | - | chr2_3:27452061-27452080 | Msa0286360:intron | 25.0% |
| ! | AAGTCCTTTGTAATCATATT+GGG | + | chr2_3:27452089-27452108 | None:intergenic | 25.0% |
| ! | CTAAAATTGCAATAAATGCA+AGG | + | chr2_3:27452114-27452133 | None:intergenic | 25.0% |
| !! | ATTGGATTCTTTTATCTCTT+AGG | - | chr2_3:27451427-27451446 | Msa0286360:CDS | 25.0% |
| !! | TTGGATTCTTTTATCTCTTA+GGG | - | chr2_3:27451428-27451447 | Msa0286360:CDS | 25.0% |
| ! | TTAAAAACTTACACAAAAGC+TGG | + | chr2_3:27451585-27451604 | None:intergenic | 25.0% |
| ! | AACGAACATAAATAGAAAAG+AGG | + | chr2_3:27451646-27451665 | None:intergenic | 25.0% |
| !!! | GACACAAAAAAGTTTTATGT+AGG | - | chr2_3:27451732-27451751 | Msa0286360:CDS | 25.0% |
| !!! | ACAAAAAAGTTTTATGTAGG+AGG | - | chr2_3:27451735-27451754 | Msa0286360:CDS | 25.0% |
| !!! | ATATTAGTGGTTAATTTGTC+GGG | + | chr2_3:27451799-27451818 | None:intergenic | 25.0% |
| ! | AATTTCATCGCTTAATTCAA+AGG | - | chr2_3:27451877-27451896 | Msa0286360:intron | 25.0% |
| ! | TTTACATTAACACATCATTG+TGG | - | chr2_3:27451982-27452001 | Msa0286360:intron | 25.0% |
| ! | TTACATTAACACATCATTGT+GGG | - | chr2_3:27451983-27452002 | Msa0286360:intron | 25.0% |
| ! | ATGATTGCATTGGATATATT+AGG | - | chr2_3:27452061-27452080 | Msa0286360:intron | 25.0% |
| ! | AAGTCCTTTGTAATCATATT+GGG | + | chr2_3:27452089-27452108 | None:intergenic | 25.0% |
| ! | CTAAAATTGCAATAAATGCA+AGG | + | chr2_3:27452114-27452133 | None:intergenic | 25.0% |
| !!! | CAGACCAAAAGTTTTGTTAT+TGG | - | chr2_3:27451504-27451523 | Msa0286360:CDS | 30.0% |
| AGAAATAGTAGCAGTTATTG+GGG | + | chr2_3:27451544-27451563 | None:intergenic | 30.0% | |
| CAGAAATAGTAGCAGTTATT+GGG | + | chr2_3:27451545-27451564 | None:intergenic | 30.0% | |
| !! | TATTAGTGGTTAATTTGTCG+GGG | + | chr2_3:27451798-27451817 | None:intergenic | 30.0% |
| TGTAAGAGGAAAATAGAGAA+AGG | - | chr2_3:27451833-27451852 | Msa0286360:intron | 30.0% | |
| TACATTAACACATCATTGTG+GGG | - | chr2_3:27451984-27452003 | Msa0286360:intron | 30.0% | |
| AGTCCTTTGTAATCATATTG+GGG | + | chr2_3:27452088-27452107 | None:intergenic | 30.0% | |
| GAAGTCCTTTGTAATCATAT+TGG | + | chr2_3:27452090-27452109 | None:intergenic | 30.0% | |
| !!! | TTTTTGGGTGAAGTTAACTA+TGG | - | chr2_3:27452237-27452256 | Msa0286360:intron | 30.0% |
| TTTGAAAGCTATTGCAATAG+AGG | - | chr2_3:27452355-27452374 | Msa0286360:CDS | 30.0% | |
| !!! | CAGACCAAAAGTTTTGTTAT+TGG | - | chr2_3:27451504-27451523 | Msa0286360:CDS | 30.0% |
| AGAAATAGTAGCAGTTATTG+GGG | + | chr2_3:27451544-27451563 | None:intergenic | 30.0% | |
| CAGAAATAGTAGCAGTTATT+GGG | + | chr2_3:27451545-27451564 | None:intergenic | 30.0% | |
| !! | TATTAGTGGTTAATTTGTCG+GGG | + | chr2_3:27451798-27451817 | None:intergenic | 30.0% |
| TGTAAGAGGAAAATAGAGAA+AGG | - | chr2_3:27451833-27451852 | Msa0286360:intron | 30.0% | |
| TACATTAACACATCATTGTG+GGG | - | chr2_3:27451984-27452003 | Msa0286360:intron | 30.0% | |
| AGTCCTTTGTAATCATATTG+GGG | + | chr2_3:27452088-27452107 | None:intergenic | 30.0% | |
| GAAGTCCTTTGTAATCATAT+TGG | + | chr2_3:27452090-27452109 | None:intergenic | 30.0% | |
| !!! | TTTTTGGGTGAAGTTAACTA+TGG | - | chr2_3:27452237-27452256 | Msa0286360:intron | 30.0% |
| TTTGAAAGCTATTGCAATAG+AGG | - | chr2_3:27452355-27452374 | Msa0286360:CDS | 30.0% | |
| ! | GATTCTTTTATCTCTTAGGG+TGG | - | chr2_3:27451431-27451450 | Msa0286360:CDS | 35.0% |
| ! | GGTGCCAATAACAAAACTTT+TGG | + | chr2_3:27451511-27451530 | None:intergenic | 35.0% |
| GCAGAAATAGTAGCAGTTAT+TGG | + | chr2_3:27451546-27451565 | None:intergenic | 35.0% | |
| AGCTGGAGTTTGATGAAATT+TGG | + | chr2_3:27451568-27451587 | None:intergenic | 35.0% | |
| TAGTAGAAGAGGTCGAATTT+CGG | + | chr2_3:27451762-27451781 | None:intergenic | 35.0% | |
| !! | ATTAGTGGTTAATTTGTCGG+GGG | + | chr2_3:27451797-27451816 | None:intergenic | 35.0% |
| ! | AAATGCTAGTCTCCATAACT+TGG | - | chr2_3:27452036-27452055 | Msa0286360:intron | 35.0% |
| ATGCAATCATCACCAAGTTA+TGG | + | chr2_3:27452051-27452070 | None:intergenic | 35.0% | |
| !! | TAACTTGGTGATGATTGCAT+TGG | - | chr2_3:27452051-27452070 | Msa0286360:intron | 35.0% |
| ATGGTAATTCACATGCAAGA+TGG | - | chr2_3:27452314-27452333 | Msa0286360:CDS | 35.0% | |
| TGGTAATTCACATGCAAGAT+GGG | - | chr2_3:27452315-27452334 | Msa0286360:CDS | 35.0% | |
| GCCAATGAAAGAAGCAATAA+GGG | + | chr2_3:27452389-27452408 | None:intergenic | 35.0% | |
| AGCCAATGAAAGAAGCAATA+AGG | + | chr2_3:27452390-27452409 | None:intergenic | 35.0% | |
| ! | GATTCTTTTATCTCTTAGGG+TGG | - | chr2_3:27451431-27451450 | Msa0286360:CDS | 35.0% |
| ! | GGTGCCAATAACAAAACTTT+TGG | + | chr2_3:27451511-27451530 | None:intergenic | 35.0% |
| GCAGAAATAGTAGCAGTTAT+TGG | + | chr2_3:27451546-27451565 | None:intergenic | 35.0% | |
| AGCTGGAGTTTGATGAAATT+TGG | + | chr2_3:27451568-27451587 | None:intergenic | 35.0% | |
| TAGTAGAAGAGGTCGAATTT+CGG | + | chr2_3:27451762-27451781 | None:intergenic | 35.0% | |
| !! | ATTAGTGGTTAATTTGTCGG+GGG | + | chr2_3:27451797-27451816 | None:intergenic | 35.0% |
| ! | AAATGCTAGTCTCCATAACT+TGG | - | chr2_3:27452036-27452055 | Msa0286360:intron | 35.0% |
| ATGCAATCATCACCAAGTTA+TGG | + | chr2_3:27452051-27452070 | None:intergenic | 35.0% | |
| !! | TAACTTGGTGATGATTGCAT+TGG | - | chr2_3:27452051-27452070 | Msa0286360:intron | 35.0% |
| ATGGTAATTCACATGCAAGA+TGG | - | chr2_3:27452314-27452333 | Msa0286360:CDS | 35.0% | |
| TGGTAATTCACATGCAAGAT+GGG | - | chr2_3:27452315-27452334 | Msa0286360:CDS | 35.0% | |
| GCCAATGAAAGAAGCAATAA+GGG | + | chr2_3:27452389-27452408 | None:intergenic | 35.0% | |
| AGCCAATGAAAGAAGCAATA+AGG | + | chr2_3:27452390-27452409 | None:intergenic | 35.0% | |
| !!! | AGTTTTGTTATTGGCACCGT+TGG | - | chr2_3:27451513-27451532 | Msa0286360:CDS | 40.0% |
| ! | AGTTATTGGGGTGTTACCAA+CGG | + | chr2_3:27451532-27451551 | None:intergenic | 40.0% |
| ATACGATTGGACTACTCGTT+CGG | + | chr2_3:27451705-27451724 | None:intergenic | 40.0% | |
| TGTGTCTGAATCGATACGAT+TGG | + | chr2_3:27451718-27451737 | None:intergenic | 40.0% | |
| AGGTTCTTTGTGATAGCCAA+TGG | - | chr2_3:27452013-27452032 | Msa0286360:intron | 40.0% | |
| ATGGAGACTAGCATTTCCAT+TGG | + | chr2_3:27452032-27452051 | None:intergenic | 40.0% | |
| GGACCCCAATATGATTACAA+AGG | - | chr2_3:27452082-27452101 | Msa0286360:intron | 40.0% | |
| !! | GTTAACTATGGCTCTAGCAT+CGG | - | chr2_3:27452249-27452268 | Msa0286360:intron | 40.0% |
| AGCAACATTCATGTCAGCAT+TGG | - | chr2_3:27452285-27452304 | Msa0286360:CDS | 40.0% | |
| GCAACATTCATGTCAGCATT+GGG | - | chr2_3:27452286-27452305 | Msa0286360:CDS | 40.0% | |
| ! | ATGTCAGCATTGGGAAGAAA+TGG | - | chr2_3:27452295-27452314 | Msa0286360:CDS | 40.0% |
| GAAAGCTATTGCAATAGAGG+TGG | - | chr2_3:27452358-27452377 | Msa0286360:CDS | 40.0% | |
| GCCCTTATTGCTTCTTTCAT+TGG | - | chr2_3:27452385-27452404 | Msa0286360:CDS | 40.0% | |
| !!! | AGTTTTGTTATTGGCACCGT+TGG | - | chr2_3:27451513-27451532 | Msa0286360:CDS | 40.0% |
| ! | AGTTATTGGGGTGTTACCAA+CGG | + | chr2_3:27451532-27451551 | None:intergenic | 40.0% |
| ATACGATTGGACTACTCGTT+CGG | + | chr2_3:27451705-27451724 | None:intergenic | 40.0% | |
| TGTGTCTGAATCGATACGAT+TGG | + | chr2_3:27451718-27451737 | None:intergenic | 40.0% | |
| AGGTTCTTTGTGATAGCCAA+TGG | - | chr2_3:27452013-27452032 | Msa0286360:intron | 40.0% | |
| ATGGAGACTAGCATTTCCAT+TGG | + | chr2_3:27452032-27452051 | None:intergenic | 40.0% | |
| GGACCCCAATATGATTACAA+AGG | - | chr2_3:27452082-27452101 | Msa0286360:intron | 40.0% | |
| !! | GTTAACTATGGCTCTAGCAT+CGG | - | chr2_3:27452249-27452268 | Msa0286360:intron | 40.0% |
| AGCAACATTCATGTCAGCAT+TGG | - | chr2_3:27452285-27452304 | Msa0286360:CDS | 40.0% | |
| GCAACATTCATGTCAGCATT+GGG | - | chr2_3:27452286-27452305 | Msa0286360:CDS | 40.0% | |
| ! | ATGTCAGCATTGGGAAGAAA+TGG | - | chr2_3:27452295-27452314 | Msa0286360:CDS | 40.0% |
| GAAAGCTATTGCAATAGAGG+TGG | - | chr2_3:27452358-27452377 | Msa0286360:CDS | 40.0% | |
| GCCCTTATTGCTTCTTTCAT+TGG | - | chr2_3:27452385-27452404 | Msa0286360:CDS | 40.0% | |
| GGTGAAGAGAAAGTTGAACG+TGG | - | chr2_3:27451369-27451388 | Msa0286360:CDS | 45.0% | |
| TACGATTGGACTACTCGTTC+GGG | + | chr2_3:27451704-27451723 | None:intergenic | 45.0% | |
| !! | GAGAGAGTTGGTAGTAGAAG+AGG | + | chr2_3:27451773-27451792 | None:intergenic | 45.0% |
| ACATCATTGTGGGGTGAAAC+AGG | - | chr2_3:27451993-27452012 | Msa0286360:intron | 45.0% | |
| AGCTATTGCAATAGAGGTGG+TGG | - | chr2_3:27452361-27452380 | Msa0286360:CDS | 45.0% | |
| AGGTTTGAGAAGCTTGGCAA+TGG | + | chr2_3:27452443-27452462 | None:intergenic | 45.0% | |
| GCGATTAGGTTTGAGAAGCT+TGG | + | chr2_3:27452449-27452468 | None:intergenic | 45.0% | |
| GGAGCATGGTTAATGCGATT+AGG | + | chr2_3:27452463-27452482 | None:intergenic | 45.0% | |
| GGTGAAGAGAAAGTTGAACG+TGG | - | chr2_3:27451369-27451388 | Msa0286360:CDS | 45.0% | |
| TACGATTGGACTACTCGTTC+GGG | + | chr2_3:27451704-27451723 | None:intergenic | 45.0% | |
| !! | GAGAGAGTTGGTAGTAGAAG+AGG | + | chr2_3:27451773-27451792 | None:intergenic | 45.0% |
| ACATCATTGTGGGGTGAAAC+AGG | - | chr2_3:27451993-27452012 | Msa0286360:intron | 45.0% | |
| AGCTATTGCAATAGAGGTGG+TGG | - | chr2_3:27452361-27452380 | Msa0286360:CDS | 45.0% | |
| AGGTTTGAGAAGCTTGGCAA+TGG | + | chr2_3:27452443-27452462 | None:intergenic | 45.0% | |
| GCGATTAGGTTTGAGAAGCT+TGG | + | chr2_3:27452449-27452468 | None:intergenic | 45.0% | |
| GGAGCATGGTTAATGCGATT+AGG | + | chr2_3:27452463-27452482 | None:intergenic | 45.0% | |
| !!! | ATTGATAAATAATATTTTTT+TGG | - | chr2_3:27452221-27452240 | Msa0286360:intron | 5.0% |
| !!! | TTGATAAATAATATTTTTTT+GGG | - | chr2_3:27452222-27452241 | Msa0286360:intron | 5.0% |
| !!! | ATTGATAAATAATATTTTTT+TGG | - | chr2_3:27452221-27452240 | Msa0286360:intron | 5.0% |
| !!! | TTGATAAATAATATTTTTTT+GGG | - | chr2_3:27452222-27452241 | Msa0286360:intron | 5.0% |
| TGCAGCTGCAACACTTGTGA+TGG | - | chr2_3:27451470-27451489 | Msa0286360:CDS | 50.0% | |
| TGCAGCTGCAACACTTGTGA+TGG | - | chr2_3:27451470-27451489 | Msa0286360:CDS | 50.0% | |
| ! | CACAAGTGTTGCAGCTGCAG+TGG | + | chr2_3:27451469-27451488 | None:intergenic | 55.0% |
| TTTGTCGGGGGAGAGAGAGT+TGG | + | chr2_3:27451785-27451804 | None:intergenic | 55.0% | |
| !! | ACTATGGCTCTAGCATCGGC+TGG | - | chr2_3:27452253-27452272 | Msa0286360:intron | 55.0% |
| ! | CACAAGTGTTGCAGCTGCAG+TGG | + | chr2_3:27451469-27451488 | None:intergenic | 55.0% |
| TTTGTCGGGGGAGAGAGAGT+TGG | + | chr2_3:27451785-27451804 | None:intergenic | 55.0% | |
| !! | ACTATGGCTCTAGCATCGGC+TGG | - | chr2_3:27452253-27452272 | Msa0286360:intron | 55.0% |
| !! | GCTCTAGCATCGGCTGGAGA+TGG | - | chr2_3:27452259-27452278 | Msa0286360:CDS | 60.0% |
| !! | GCTCTAGCATCGGCTGGAGA+TGG | - | chr2_3:27452259-27452278 | Msa0286360:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 27451354 | 27452492 | 27451354 | ID=Msa0286360;Name=Msa0286360 |
| chr2_3 | mRNA | 27451354 | 27452492 | 27451354 | ID=Msa0286360-mRNA-1;Parent=Msa0286360;Name=Msa0286360-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|201 |
| chr2_3 | exon | 27452254 | 27452492 | 27452254 | ID=Msa0286360-mRNA-1:exon:9840;Parent=Msa0286360-mRNA-1 |
| chr2_3 | exon | 27451708 | 27451831 | 27451708 | ID=Msa0286360-mRNA-1:exon:9839;Parent=Msa0286360-mRNA-1 |
| chr2_3 | exon | 27451354 | 27451596 | 27451354 | ID=Msa0286360-mRNA-1:exon:9838;Parent=Msa0286360-mRNA-1 |
| chr2_3 | CDS | 27452254 | 27452492 | 27452254 | ID=Msa0286360-mRNA-1:cds;Parent=Msa0286360-mRNA-1 |
| chr2_3 | CDS | 27451708 | 27451831 | 27451708 | ID=Msa0286360-mRNA-1:cds;Parent=Msa0286360-mRNA-1 |
| chr2_3 | CDS | 27451354 | 27451596 | 27451354 | ID=Msa0286360-mRNA-1:cds;Parent=Msa0286360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
