Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0903400 | XP_039690846.1 | 94.106 | 1001 | 55 | 2 | 1 | 1000 | 1 | 998 | 0.0 | 1797 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0903400 | sp|Q8L7C2|CFM2_ARATH | 51.115 | 1031 | 415 | 19 | 18 | 999 | 21 | 1011 | 0.0 | 951 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0044710 | Msa0903400 | 0.810828 | 9.491776e-51 | -8.615850e-47 |
Msa0050720 | Msa0903400 | 0.805627 | 1.218184e-49 | -8.615850e-47 |
Msa0061150 | Msa0903400 | 0.814267 | 1.680803e-51 | -8.615850e-47 |
Msa0105700 | Msa0903400 | 0.814160 | 1.774836e-51 | -8.615850e-47 |
Msa0111310 | Msa0903400 | 0.807426 | 5.083870e-50 | -8.615850e-47 |
Msa0638280 | Msa0903400 | 0.818603 | 1.798315e-52 | -8.615850e-47 |
Msa0638320 | Msa0903400 | 0.803190 | 3.922907e-49 | -8.615850e-47 |
Msa0677270 | Msa0903400 | 0.801793 | 7.614361e-49 | -8.615850e-47 |
Msa0688370 | Msa0903400 | 0.806575 | 7.695782e-50 | -8.615850e-47 |
Msa0705420 | Msa0903400 | 0.817566 | 3.086198e-52 | -8.615850e-47 |
Msa0706600 | Msa0903400 | 0.802156 | 6.412163e-49 | -8.615850e-47 |
Msa0782470 | Msa0903400 | 0.824860 | 6.421005e-54 | -8.615850e-47 |
Msa0782490 | Msa0903400 | 0.827335 | 1.655548e-54 | -8.615850e-47 |
Msa0142420 | Msa0903400 | 0.816771 | 4.658157e-52 | -8.615850e-47 |
Msa0152170 | Msa0903400 | 0.808536 | 2.951313e-50 | -8.615850e-47 |
Msa0389810 | Msa0903400 | 0.813858 | 2.068337e-51 | -8.615850e-47 |
Msa0431830 | Msa0903400 | 0.810770 | 9.771083e-51 | -8.615850e-47 |
Msa0462590 | Msa0903400 | 0.800278 | 1.553598e-48 | -8.615850e-47 |
Msa0468130 | Msa0903400 | 0.804514 | 2.083202e-49 | -8.615850e-47 |
Msa0468160 | Msa0903400 | 0.823690 | 1.209241e-53 | -8.615850e-47 |
Msa0475240 | Msa0903400 | 0.812202 | 4.772673e-51 | -8.615850e-47 |
Msa0307470 | Msa0903400 | 0.800954 | 1.131235e-48 | -8.615850e-47 |
Msa0344830 | Msa0903400 | 0.809709 | 1.655119e-50 | -8.615850e-47 |
Msa0347610 | Msa0903400 | 0.800630 | 1.316720e-48 | -8.615850e-47 |
Msa0358170 | Msa0903400 | 0.825579 | 4.340347e-54 | -8.615850e-47 |
Msa0540070 | Msa0903400 | 0.818151 | 2.276734e-52 | -8.615850e-47 |
Msa0579290 | Msa0903400 | 0.810063 | 1.388260e-50 | -8.615850e-47 |
Msa0579390 | Msa0903400 | 0.809843 | 1.548549e-50 | -8.615850e-47 |
Msa0870150 | Msa0903400 | 0.911385 | 6.459596e-83 | -8.615850e-47 |
Msa0880220 | Msa0903400 | 0.835131 | 2.006161e-56 | -8.615850e-47 |
Msa0898860 | Msa0903400 | 0.802506 | 5.431867e-49 | -8.615850e-47 |
Msa0903400 | Msa0928030 | 0.808630 | 2.818383e-50 | -8.615850e-47 |
Msa0903400 | Msa0935850 | 0.876318 | 1.536559e-68 | -8.615850e-47 |
Msa0903400 | Msa0944550 | 0.820787 | 5.703524e-53 | -8.615850e-47 |
Msa0903400 | Msa0964430 | 0.802584 | 5.235357e-49 | -8.615850e-47 |
Msa0903400 | Msa0972860 | 0.841458 | 4.694398e-58 | -8.615850e-47 |
Msa0903400 | Msa0982270 | 0.804855 | 1.767807e-49 | -8.615850e-47 |
Msa0903400 | Msa1021340 | 0.819075 | 1.404996e-52 | -8.615850e-47 |
Msa0903400 | Msa1054410 | 0.830036 | 3.681014e-55 | -8.615850e-47 |
Msa0903400 | Msa1148720 | 0.814091 | 1.837764e-51 | -8.615850e-47 |
Msa0903400 | Msa1148750 | 0.824917 | 6.225699e-54 | -8.615850e-47 |
Msa0903400 | Msa1174870 | 0.816979 | 4.182856e-52 | -8.615850e-47 |
Msa0903400 | Msa1206020 | 0.814465 | 1.519301e-51 | -8.615850e-47 |
Msa0903400 | Msa1217430 | -0.804763 | 1.848117e-49 | -8.615850e-47 |
Msa0903400 | Msa1234690 | 0.810078 | 1.378250e-50 | -8.615850e-47 |
Msa0903400 | Msa1234730 | 0.810493 | 1.121682e-50 | -8.615850e-47 |
Msa0903400 | Msa1262920 | 0.809240 | 2.086880e-50 | -8.615850e-47 |
Msa0903400 | Msa1282920 | 0.810025 | 1.414786e-50 | -8.615850e-47 |
Msa0903400 | Msa1302100 | 0.818857 | 1.574845e-52 | -8.615850e-47 |
Msa0903400 | Msa1306580 | 0.832059 | 1.173168e-55 | -8.615850e-47 |
Msa0903400 | Msa1307740 | 0.804527 | 2.069386e-49 | -8.615850e-47 |
Msa0903400 | Msa1315110 | 0.815429 | 9.285967e-52 | -8.615850e-47 |
Msa0903400 | Msa1328850 | 0.800977 | 1.118862e-48 | -8.615850e-47 |
Msa0903400 | Msa1369530 | 0.819050 | 1.423413e-52 | -8.615850e-47 |
Msa0903400 | Msa1375340 | 0.842997 | 1.836467e-58 | -8.615850e-47 |
Msa0903400 | Msa1391490 | 0.813487 | 2.496732e-51 | -8.615850e-47 |
Msa0903400 | Msa1397970 | 0.816708 | 4.811525e-52 | -8.615850e-47 |
Msa0903400 | Msa1398800 | 0.816437 | 5.533488e-52 | -8.615850e-47 |
Msa0903400 | Msa1419970 | 0.803857 | 2.853250e-49 | -8.615850e-47 |
Msa0903400 | Msa1427830 | 0.861155 | 1.250898e-63 | -8.615850e-47 |
Msa0903400 | Msa1440610 | 0.810364 | 1.196053e-50 | -8.615850e-47 |
Msa0903400 | Msa1454110 | 0.853384 | 2.476718e-61 | -8.615850e-47 |
Msa0903400 | Msa1461250 | -0.807755 | 4.328481e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0903400 | MtrunA17_Chr6g0451621 | 89.885 | 1048 | 55 | 3 | 1 | 1000 | 1 | 1045 | 0.0 | 1777 |
Msa0903400 | MtrunA17_Chr1g0187011 | 39.744 | 780 | 373 | 18 | 4 | 717 | 42 | 790 | 3.94e-164 | 503 |
Msa0903400 | MtrunA17_Chr4g0071101 | 43.089 | 615 | 304 | 6 | 110 | 698 | 135 | 729 | 1.36e-148 | 459 |
Msa0903400 | MtrunA17_Chr6g0484411 | 42.088 | 613 | 307 | 9 | 135 | 721 | 194 | 784 | 1.75e-144 | 451 |
Msa0903400 | MtrunA17_Chr8g0391141 | 36.788 | 685 | 329 | 14 | 13 | 679 | 5 | 603 | 2.48e-127 | 400 |
Msa0903400 | MtrunA17_Chr2g0330811 | 38.836 | 636 | 328 | 11 | 118 | 706 | 123 | 744 | 2.93e-122 | 390 |
Msa0903400 | MtrunA17_Chr8g0366041 | 38.298 | 235 | 130 | 3 | 165 | 398 | 1 | 221 | 1.95e-46 | 166 |
Msa0903400 | MtrunA17_Chr4g0067911 | 36.181 | 199 | 121 | 3 | 511 | 706 | 149 | 344 | 9.81e-26 | 109 |
Msa0903400 | MtrunA17_Chr4g0033621 | 37.423 | 163 | 96 | 3 | 539 | 699 | 151 | 309 | 1.46e-22 | 102 |
Msa0903400 | MtrunA17_Chr1g0171521 | 38.255 | 149 | 84 | 4 | 526 | 669 | 123 | 268 | 2.07e-22 | 98.2 |
Msa0903400 | MtrunA17_Chr8g0391361 | 38.776 | 147 | 84 | 3 | 524 | 667 | 8 | 151 | 2.39e-22 | 95.1 |
Msa0903400 | MtrunA17_Chr6g0449261 | 36.585 | 164 | 99 | 2 | 533 | 694 | 124 | 284 | 4.17e-15 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0903400 | AT3G01370.1 | 51.115 | 1031 | 415 | 19 | 18 | 999 | 21 | 1011 | 0.0 | 951 |
Msa0903400 | AT3G18390.1 | 44.332 | 591 | 287 | 7 | 140 | 706 | 229 | 801 | 8.68e-160 | 493 |
Msa0903400 | AT4G14510.1 | 42.357 | 628 | 286 | 10 | 148 | 717 | 216 | 825 | 7.01e-150 | 468 |
Msa0903400 | AT3G23070.1 | 40.113 | 708 | 370 | 10 | 46 | 721 | 117 | 802 | 6.06e-145 | 454 |
Msa0903400 | AT4G29750.1 | 41.842 | 619 | 297 | 10 | 143 | 728 | 233 | 821 | 2.78e-143 | 449 |
Msa0903400 | AT4G29750.2 | 42.857 | 581 | 274 | 8 | 143 | 695 | 233 | 783 | 7.49e-143 | 447 |
Msa0903400 | AT5G16180.1 | 42.787 | 409 | 210 | 6 | 321 | 705 | 311 | 719 | 5.20e-90 | 303 |
Msa0903400 | AT5G16180.2 | 54.305 | 151 | 69 | 0 | 321 | 471 | 311 | 461 | 4.51e-50 | 186 |
Msa0903400 | AT4G13070.1 | 41.935 | 155 | 75 | 5 | 524 | 670 | 144 | 291 | 1.88e-23 | 103 |
Msa0903400 | AT2G28480.1 | 36.957 | 184 | 107 | 4 | 518 | 699 | 124 | 300 | 3.45e-22 | 100 |
Msa0903400 | AT3G25440.1 | 33.714 | 175 | 110 | 3 | 525 | 697 | 144 | 314 | 3.60e-21 | 98.2 |
Msa0903400 | AT3G25440.2 | 33.136 | 169 | 106 | 3 | 533 | 697 | 85 | 250 | 4.45e-21 | 97.1 |
Msa0903400 | AT3G25440.4 | 33.750 | 160 | 100 | 3 | 540 | 697 | 4 | 159 | 7.81e-20 | 91.7 |
Msa0903400 | AT3G25440.3 | 33.750 | 160 | 100 | 3 | 540 | 697 | 4 | 159 | 7.81e-20 | 91.7 |
Msa0903400 | AT3G25440.5 | 33.750 | 160 | 100 | 3 | 540 | 697 | 4 | 159 | 7.81e-20 | 91.7 |
Msa0903400 | AT3G27550.2 | 33.537 | 164 | 104 | 2 | 533 | 694 | 120 | 280 | 2.83e-14 | 77.4 |
Msa0903400 | AT3G27550.3 | 34.286 | 140 | 89 | 1 | 555 | 694 | 88 | 224 | 4.79e-14 | 76.6 |
Msa0903400 | AT3G27550.1 | 34.286 | 140 | 89 | 1 | 555 | 694 | 88 | 224 | 4.79e-14 | 76.6 |
Msa0903400 | AT2G20020.1 | 31.111 | 90 | 62 | 0 | 154 | 243 | 243 | 332 | 9.45e-12 | 69.7 |
Find 275 sgRNAs with CRISPR-Local
Find 656 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGGAGTGGCGGTAGATTT+AGG | 0.161174 | 6_2:-493131 | Msa0903400:three_prime_UTR |
ATATTGAGGTTGAGGGAATT+AGG | 0.168833 | 6_2:-502168 | Msa0903400:CDS |
CATCGATCACATCATTTAAA+AGG | 0.172244 | 6_2:-494403 | Msa0903400:CDS |
CTTCAATCTCTTTGGTCAAT+TGG | 0.173605 | 6_2:+493242 | None:intergenic |
GAAAAGGACTCATGATATTT+TGG | 0.212204 | 6_2:-502013 | Msa0903400:CDS |
TGCATCTTCATTGGAAATAT+CGG | 0.239449 | 6_2:-497880 | Msa0903400:CDS |
CTTCTACCTGCCGTTATTCC+TGG | 0.240780 | 6_2:-500088 | Msa0903400:CDS |
AGTGAATTTAGAAGGGGTTT+TGG | 0.243972 | 6_2:+502569 | None:intergenic |
GGCGAAGATCGGAAGTTGTT+AGG | 0.257970 | 6_2:-502068 | Msa0903400:CDS |
TTGGAGTGGCGGTAGATTTA+GGG | 0.264955 | 6_2:-493130 | Msa0903400:three_prime_UTR |
TGAAATGAAGCAGAAGATTA+AGG | 0.268446 | 6_2:-502142 | Msa0903400:CDS |
TTTCTTCCCTTCAATCTCTT+TGG | 0.277968 | 6_2:+493234 | None:intergenic |
CTGCTGCAATTATCAAGTTC+TGG | 0.285300 | 6_2:-499619 | Msa0903400:CDS |
CTAGCAAAATCATACTTTAC+AGG | 0.287174 | 6_2:-493526 | Msa0903400:CDS |
TATTGAGGTTGAGGGAATTA+GGG | 0.304969 | 6_2:-502167 | Msa0903400:CDS |
CTGCCGTTATTCCTGGATTT+AGG | 0.310245 | 6_2:-500081 | Msa0903400:CDS |
GCTTTAGCCTTCATCAATAA+TGG | 0.310457 | 6_2:+498357 | None:intergenic |
GATTTGTATAACTCAACATT+TGG | 0.315287 | 6_2:-493108 | Msa0903400:three_prime_UTR |
TTCAATCTCTTTGGTCAATT+GGG | 0.316267 | 6_2:+493243 | None:intergenic |
AAGCAACATTTCATGGATAA+TGG | 0.317792 | 6_2:+502656 | None:intergenic |
GTGTCAACAGAAGCTTCTTC+TGG | 0.319220 | 6_2:+495062 | None:intergenic |
AAATGTGTTGAAGAAGAAAA+TGG | 0.320801 | 6_2:-493214 | Msa0903400:three_prime_UTR |
GGGTCTTGGGCCTCGATTTA+CGG | 0.321095 | 6_2:-500149 | Msa0903400:CDS |
AGTGATTCTGTGGTTGATAC+TGG | 0.322957 | 6_2:-494458 | Msa0903400:CDS |
AAAGTGCAGCCAACAGAAAT+TGG | 0.326941 | 6_2:-493149 | Msa0903400:three_prime_UTR |
TCCACCACTTTCTGTCTCTA+AGG | 0.329922 | 6_2:+497796 | None:intergenic |
ATGCGTTGAATGGCGGAATC+AGG | 0.330238 | 6_2:+502513 | None:intergenic |
GAATACTAGCAATAAGAAAA+TGG | 0.340852 | 6_2:-499552 | Msa0903400:CDS |
GTAACGGAAGGGATTGTTAA+TGG | 0.344102 | 6_2:-502105 | Msa0903400:CDS |
AAACGAGTTTCCTTCTAGTT+TGG | 0.344818 | 6_2:-494653 | Msa0903400:CDS |
TCGTTGGAAGCAACATTTCA+TGG | 0.345930 | 6_2:+502649 | None:intergenic |
CAAACTGACCCAATGCAAAA+TGG | 0.346760 | 6_2:+499966 | None:intergenic |
AAGAAGAAGTCTCTCTCTAT+TGG | 0.347927 | 6_2:+494310 | None:intergenic |
GAAAATGGCTGAAGAGATTA+AGG | 0.347940 | 6_2:-499537 | Msa0903400:intron |
AAACTGGAGGACTTGTTGTT+TGG | 0.357673 | 6_2:-500471 | Msa0903400:CDS |
GTCATGTGATACCTCTAGTA+TGG | 0.357973 | 6_2:+493688 | None:intergenic |
TCAAAGGACTAGCATCAAAT+TGG | 0.359072 | 6_2:-498328 | Msa0903400:CDS |
GTGTGACCGACGCGGTGTTT+TGG | 0.361433 | 6_2:+502363 | None:intergenic |
ACCAAACCAGTCAAGGATTC+TGG | 0.364173 | 6_2:+494975 | None:intergenic |
AGATACATGTTGCGGAGAAT+TGG | 0.365846 | 6_2:-498114 | Msa0903400:CDS |
GGACTTGTTGTTTGGAGATC+TGG | 0.366719 | 6_2:-500463 | Msa0903400:CDS |
GTGCGAATAGTGAATTTAGA+AGG | 0.368749 | 6_2:+502561 | None:intergenic |
TTTGGGAGTGTGTGTGGTAA+TGG | 0.369886 | 6_2:+502381 | None:intergenic |
TTTGGATGAACCAAACTAGA+AGG | 0.370316 | 6_2:+494643 | None:intergenic |
GGCGGAGGTGGTGGAGGTTG+TGG | 0.381067 | 6_2:+502419 | None:intergenic |
ATCACCGGAGCTGATGGTTC+AGG | 0.381083 | 6_2:+494377 | None:intergenic |
GAAGTTATTGTCATTTATAG+AGG | 0.384386 | 6_2:-498540 | Msa0903400:CDS |
AATCATACTTTACAGGGGTT+GGG | 0.391181 | 6_2:-493519 | Msa0903400:CDS |
TTGACATTAACTATGACAAA+AGG | 0.394366 | 6_2:+493749 | None:intergenic |
ACAGCTTGTTAGAGGGTCTT+GGG | 0.397641 | 6_2:-500162 | Msa0903400:CDS |
AGAGGATTGGTCGGTGGTGG+TGG | 0.398243 | 6_2:+502458 | None:intergenic |
GATTTCACCGGCGGAGGTGG+TGG | 0.399871 | 6_2:+502410 | None:intergenic |
TGGCGGAATCAGGGAGGGTG+TGG | 0.399987 | 6_2:+502523 | None:intergenic |
TGACGGATGGAGAGATATTG+AGG | 0.403123 | 6_2:-502182 | Msa0903400:CDS |
GACAGCTTGTTAGAGGGTCT+TGG | 0.404713 | 6_2:-500163 | Msa0903400:CDS |
CTGAACTCATTTCAGATGAA+TGG | 0.405516 | 6_2:+500308 | None:intergenic |
CTGGAGGAACTCTCCTTTCT+CGG | 0.406258 | 6_2:-498569 | Msa0903400:CDS |
ACCAGAATCCTTGACTGGTT+TGG | 0.410370 | 6_2:-494976 | Msa0903400:CDS |
ATTTGTATAACTCAACATTT+GGG | 0.410949 | 6_2:-493107 | Msa0903400:three_prime_UTR |
TCTCTTTGGTCAATTGGGTC+AGG | 0.412887 | 6_2:+493248 | None:intergenic |
ATCATACTTTACAGGGGTTG+GGG | 0.417270 | 6_2:-493518 | Msa0903400:CDS |
TAACTTCTTTATTCCGAGAA+AGG | 0.417396 | 6_2:+498556 | None:intergenic |
TGGAAAATATGCATCTTCAT+TGG | 0.418682 | 6_2:-497889 | Msa0903400:CDS |
GTTCGCGGCCTCAAACTATC+AGG | 0.418831 | 6_2:+497701 | None:intergenic |
AAATCATACTTTACAGGGGT+TGG | 0.420723 | 6_2:-493520 | Msa0903400:CDS |
AGTTGAAATCTCACTCTATT+GGG | 0.420829 | 6_2:+500217 | None:intergenic |
CAGTTGAAATCTCACTCTAT+TGG | 0.422620 | 6_2:+500216 | None:intergenic |
TGGAGAAGAAGGAGTGAAGA+AGG | 0.422800 | 6_2:+502614 | None:intergenic |
TCAGTTTGTATACATTATAT+CGG | 0.425397 | 6_2:+492914 | None:intergenic |
TTGTTTGTGAGGATCTTTGT+AGG | 0.425480 | 6_2:-502044 | Msa0903400:CDS |
GATAGCTAAAGAGTTGAGAT+TGG | 0.428612 | 6_2:-496158 | Msa0903400:CDS |
GGAGGAAGAAGAAGAGGAAG+AGG | 0.431041 | 6_2:+502440 | None:intergenic |
AGAAGTAGACAGCTTGTTAG+AGG | 0.433202 | 6_2:-500170 | Msa0903400:CDS |
AATGTCAAAGGAAGGGCAAA+AGG | 0.433490 | 6_2:-493734 | Msa0903400:CDS |
GGATTGGTCGGTGGTGGTGG+TGG | 0.434453 | 6_2:+502461 | None:intergenic |
GCCTCGATTTACGGATTGGT+GGG | 0.436445 | 6_2:-500140 | Msa0903400:CDS |
ACTTCATCTGATAGGAAGTA+AGG | 0.436466 | 6_2:+500400 | None:intergenic |
CATATCATTCCAATGTGATC+TGG | 0.437011 | 6_2:-494707 | Msa0903400:CDS |
TTCTTCGAAAGCAGGCCTTA+AGG | 0.441085 | 6_2:-494292 | Msa0903400:CDS |
CCTGCGCCAACTAGAGGAAC+TGG | 0.442152 | 6_2:+502309 | None:intergenic |
GGGAAGAAGAATGGAGAAGA+AGG | 0.442675 | 6_2:+502603 | None:intergenic |
TTTGTAGGATTAATATGAAA+AGG | 0.447738 | 6_2:-502029 | Msa0903400:CDS |
TGCTGCAATTATCAAGTTCT+GGG | 0.447827 | 6_2:-499618 | Msa0903400:CDS |
GGCCTCGATTTACGGATTGG+TGG | 0.450180 | 6_2:-500141 | Msa0903400:CDS |
GTATGCAAAAGCAAAATCTC+AGG | 0.451841 | 6_2:+493271 | None:intergenic |
TGAAGTTGAGAGAGCGCGAT+TGG | 0.453856 | 6_2:-502265 | Msa0903400:CDS |
TCATACTTGCAGGAAGAAAC+AGG | 0.453882 | 6_2:-493572 | Msa0903400:intron |
GAGACTTCTTCTTCGAAAGC+AGG | 0.454007 | 6_2:-494300 | Msa0903400:CDS |
CAACAGCTCGGGAGAGACAT+TGG | 0.454241 | 6_2:+493430 | None:intergenic |
ATGGAGAGATATTGAGGTTG+AGG | 0.454353 | 6_2:-502176 | Msa0903400:CDS |
GCGAAGATCGGAAGTTGTTA+GGG | 0.455239 | 6_2:-502067 | Msa0903400:CDS |
AGCTTAGACTGCACACCATA+TGG | 0.457604 | 6_2:+500040 | None:intergenic |
TTCACCGGCGGAGGTGGTGG+AGG | 0.459447 | 6_2:+502413 | None:intergenic |
CAAAACCGTAAAACCAGCTT+TGG | 0.460882 | 6_2:-500257 | Msa0903400:CDS |
CTCTCAAAACTTCATCTGAT+AGG | 0.461751 | 6_2:+500392 | None:intergenic |
TGAACTCATTTCAGATGAAT+GGG | 0.464393 | 6_2:+500309 | None:intergenic |
GGAAGAGGATTGGTCGGTGG+TGG | 0.464476 | 6_2:+502455 | None:intergenic |
TCTCTAAGGTCCGAGCTGTC+TGG | 0.464740 | 6_2:+497810 | None:intergenic |
TCCATGTGCTGCTCTTGTAT+AGG | 0.468315 | 6_2:+495032 | None:intergenic |
AACAGCTCGGGAGAGACATT+GGG | 0.469810 | 6_2:+493431 | None:intergenic |
AAGATTAAGGTTGGAAAAGC+CGG | 0.471265 | 6_2:-502129 | Msa0903400:CDS |
TCATGAACGTTGGCGAAGAT+CGG | 0.472568 | 6_2:-502079 | Msa0903400:CDS |
TGGTGGTGATGCCGAGGGAA+TGG | 0.474939 | 6_2:+502478 | None:intergenic |
GCCGAGGGAATGGAGTTTAT+CGG | 0.474964 | 6_2:+502488 | None:intergenic |
AGAACAAGAAATAGATAAAG+AGG | 0.476169 | 6_2:-498154 | Msa0903400:CDS |
ATCGATCACATCATTTAAAA+GGG | 0.476446 | 6_2:-494402 | Msa0903400:CDS |
TGGTGGTGGTGGTGATGCCG+AGG | 0.477981 | 6_2:+502472 | None:intergenic |
AGGTGCAGTTCTAGTCTCTC+AGG | 0.478325 | 6_2:-493552 | Msa0903400:CDS |
GGCGAAGGAGAAGGAGAGGA+AGG | 0.479267 | 6_2:-502244 | Msa0903400:CDS |
GTCACACACTCGACCTCAGC+TGG | 0.480545 | 6_2:-502347 | Msa0903400:CDS |
GAAGATTTCACCGGCGGAGG+TGG | 0.482280 | 6_2:+502407 | None:intergenic |
CTTCAGCAATTAAACAGAGA+TGG | 0.483872 | 6_2:-498491 | Msa0903400:CDS |
ATTGAACTCTTATTTATCAC+CGG | 0.484670 | 6_2:+494362 | None:intergenic |
AGAAGGAGAGGAAGGAGAAG+AGG | 0.485180 | 6_2:-502236 | Msa0903400:CDS |
ATCACACCAACTCAATTCAT+AGG | 0.485832 | 6_2:-493481 | Msa0903400:CDS |
GGTAGAAGATCAGCATCAAC+AGG | 0.486170 | 6_2:+500103 | None:intergenic |
AGAAGAGGAAGAGGATTGGT+CGG | 0.486235 | 6_2:+502449 | None:intergenic |
AAGAAGAAGAGGAAGAGGAT+TGG | 0.487390 | 6_2:+502445 | None:intergenic |
GGTTGTGGAGGAAGAAGAAG+AGG | 0.490383 | 6_2:+502434 | None:intergenic |
TAAAGAGTTGAGATTGGACT+TGG | 0.494978 | 6_2:-496152 | Msa0903400:intron |
ATGAGTTCAGCCACACATGC+TGG | 0.496048 | 6_2:-500295 | Msa0903400:CDS |
TGAGAGAGCGCGATTGGCGA+AGG | 0.496079 | 6_2:-502259 | Msa0903400:CDS |
ATGAAGCAGAAGATTAAGGT+TGG | 0.496298 | 6_2:-502138 | Msa0903400:CDS |
GCATCTTCATTGGAAATATC+GGG | 0.497692 | 6_2:-497879 | Msa0903400:CDS |
AGATTCTGAAAGAAAGCATA+TGG | 0.497996 | 6_2:-498412 | Msa0903400:CDS |
TCTAAAAGCTCTGCTTCACC+TGG | 0.499634 | 6_2:+500193 | None:intergenic |
GGTAGAAATAGGAAACTTCA+AGG | 0.499968 | 6_2:-499647 | Msa0903400:CDS |
TGACATTAACTATGACAAAA+GGG | 0.500828 | 6_2:+493750 | None:intergenic |
TGGAGAGATATTGAGGTTGA+GGG | 0.503341 | 6_2:-502175 | Msa0903400:CDS |
CTCGATTTACGGATTGGTGG+GGG | 0.505895 | 6_2:-500138 | Msa0903400:CDS |
AAATGAATTGAAACATCAAA+TGG | 0.509714 | 6_2:-496290 | Msa0903400:intron |
TTTGAATTCTCATTTATCAC+AGG | 0.510190 | 6_2:+494673 | None:intergenic |
ACCGCCACTCCAATTTCTGT+TGG | 0.510250 | 6_2:+493140 | None:intergenic |
TTTATCGGCGATGCGTTGAA+TGG | 0.515612 | 6_2:+502503 | None:intergenic |
CATAGGAGAGTAGCTAAATA+CGG | 0.516239 | 6_2:-493464 | Msa0903400:CDS |
AGCATTGAAGCGTTCAATAG+AGG | 0.519294 | 6_2:-497660 | Msa0903400:CDS |
TGCGAATAGTGAATTTAGAA+GGG | 0.519533 | 6_2:+502562 | None:intergenic |
GAGCAGCACATGGAGCTGAT+TGG | 0.520701 | 6_2:-495023 | Msa0903400:CDS |
TCATAGTTAATGTCAAAGGA+AGG | 0.520961 | 6_2:-493742 | Msa0903400:CDS |
AAATGAAAAGGGAAGAAGAA+TGG | 0.521022 | 6_2:+502594 | None:intergenic |
GTAAAATAATATTGTACAGA+GGG | 0.522135 | 6_2:-500438 | Msa0903400:CDS |
CGGCCTAAATCCAGGAATAA+CGG | 0.522622 | 6_2:+500078 | None:intergenic |
CTGATAGCTTCCAACAGCTC+GGG | 0.523131 | 6_2:+493419 | None:intergenic |
AAGGTGTTGAAGTTAGTCGT+TGG | 0.523365 | 6_2:+502633 | None:intergenic |
AGATCAGCATCAACAGGCAC+AGG | 0.523762 | 6_2:+500109 | None:intergenic |
TTTGGTTCATCAAGAAAGAC+AGG | 0.524182 | 6_2:-494958 | Msa0903400:intron |
TTATTTATCACCGGAGCTGA+TGG | 0.525169 | 6_2:+494371 | None:intergenic |
GTAAAACCAGCTTTGGTACA+AGG | 0.526612 | 6_2:-500250 | Msa0903400:CDS |
CCGACTCCTTGTACCAAAGC+TGG | 0.527389 | 6_2:+500244 | None:intergenic |
AAAGTCACCTAGCAACAAGA+AGG | 0.528235 | 6_2:+498077 | None:intergenic |
GGAATGCAGTAACAAACAGC+AGG | 0.528769 | 6_2:-493386 | Msa0903400:exon |
AGTAAAATAATATTGTACAG+AGG | 0.529007 | 6_2:-500439 | Msa0903400:CDS |
CCATATGGAAGTAGGCGAAA+AGG | 0.529103 | 6_2:+500055 | None:intergenic |
TGTCTCAACTAACAATGCTA+TGG | 0.529253 | 6_2:-494429 | Msa0903400:CDS |
TCATTTATCACAGGAGCTGA+TGG | 0.531249 | 6_2:+494682 | None:intergenic |
AACAATCCCTTCCGTTACAC+CGG | 0.534935 | 6_2:+502110 | None:intergenic |
GAGAATCCAGTTCCTCTAGT+TGG | 0.535200 | 6_2:-502315 | Msa0903400:CDS |
TTTGTCATAGTTAATGTCAA+AGG | 0.536638 | 6_2:-493746 | Msa0903400:CDS |
AGCGCGATTGGCGAAGGAGA+AGG | 0.537283 | 6_2:-502253 | Msa0903400:CDS |
GTGATTCTGTGGTTGATACT+GGG | 0.538615 | 6_2:-494457 | Msa0903400:CDS |
ACTAGAGGAACTGGATTCTC+CGG | 0.538677 | 6_2:+502318 | None:intergenic |
CTCTTTGGTCAATTGGGTCA+GGG | 0.539283 | 6_2:+493249 | None:intergenic |
TACTCTCCTATGAATTGAGT+TGG | 0.539529 | 6_2:+493475 | None:intergenic |
TGCGTTGAATGGCGGAATCA+GGG | 0.541195 | 6_2:+502514 | None:intergenic |
GGTGGTGGTGGTGATGCCGA+GGG | 0.541476 | 6_2:+502473 | None:intergenic |
AGTTGTTAGGGTTGTTTGTG+AGG | 0.543015 | 6_2:-502055 | Msa0903400:CDS |
TATTGTCATTTATAGAGGAA+AGG | 0.543212 | 6_2:-498535 | Msa0903400:CDS |
TTGATGAACCAAACCAGTCA+AGG | 0.544186 | 6_2:+494968 | None:intergenic |
AGGGACCTCAGTTCATGAGT+TGG | 0.544574 | 6_2:-493714 | Msa0903400:CDS |
ACTTCTCTGCAGTATCTGAC+TGG | 0.549377 | 6_2:-498588 | Msa0903400:intron |
TCTGATAGCTTCCAACAGCT+CGG | 0.550305 | 6_2:+493418 | None:intergenic |
TTAATGGAATTCATGAACGT+TGG | 0.550433 | 6_2:-502089 | Msa0903400:CDS |
TTTAGCGGAATTGAGTTTGA+CGG | 0.550499 | 6_2:-502199 | Msa0903400:CDS |
CCTCGATTTACGGATTGGTG+GGG | 0.551032 | 6_2:-500139 | Msa0903400:CDS |
AATATGTAATCAAGAAAGTG+TGG | 0.551485 | 6_2:-497843 | Msa0903400:CDS |
GGAGGTGGTGGAGGTTGTGG+AGG | 0.552258 | 6_2:+502422 | None:intergenic |
CATACTTTACAGGGGTTGGG+GGG | 0.552890 | 6_2:-493516 | Msa0903400:CDS |
CACATGGAGCTGATTGGTAG+TGG | 0.553378 | 6_2:-495017 | Msa0903400:CDS |
ATTGCTGAAGAAACTGCAGC+AGG | 0.553692 | 6_2:+498504 | None:intergenic |
GGATCCTGAACCATCAGCTC+CGG | 0.554597 | 6_2:-494381 | Msa0903400:CDS |
AGAGTGAGATTTCAACTGCC+AGG | 0.554712 | 6_2:-500211 | Msa0903400:CDS |
CCAGTTCCTCTAGTTGGCGC+AGG | 0.554852 | 6_2:-502309 | Msa0903400:CDS |
AAGGAAGATTTCACCGGCGG+AGG | 0.555607 | 6_2:+502404 | None:intergenic |
CTAAGGTCCGAGCTGTCTGG+TGG | 0.556862 | 6_2:+497813 | None:intergenic |
GGAAAGAGCAATATTGTGAC+TGG | 0.557399 | 6_2:-493809 | Msa0903400:CDS |
TAGCAAAATCATACTTTACA+GGG | 0.557524 | 6_2:-493525 | Msa0903400:CDS |
TCATACTTTACAGGGGTTGG+GGG | 0.558023 | 6_2:-493517 | Msa0903400:CDS |
TCGAGTCCTGCGCCAACTAG+AGG | 0.558107 | 6_2:+502303 | None:intergenic |
TGAGTTGGTTTCCATACTAG+AGG | 0.558428 | 6_2:-493699 | Msa0903400:intron |
ATTATACCTATGGGAACGAT+AGG | 0.558625 | 6_2:+494257 | None:intergenic |
ACAACCTCCACCACCTCCGC+CGG | 0.559900 | 6_2:-502417 | Msa0903400:CDS |
ATCGGCGATGCGTTGAATGG+CGG | 0.560791 | 6_2:+502506 | None:intergenic |
AATTGACCAAAGAGATTGAA+GGG | 0.562038 | 6_2:-493240 | Msa0903400:three_prime_UTR |
GAAGAGAGTACCGACTTTAG+CGG | 0.563105 | 6_2:-502214 | Msa0903400:CDS |
GACTAGCATCAAATTGGCAC+AGG | 0.563794 | 6_2:-498322 | Msa0903400:intron |
GGTGAACCAGAATCCTTGAC+TGG | 0.564015 | 6_2:-494981 | Msa0903400:CDS |
ATGAAGCCCTTCTTGTTGCT+AGG | 0.564414 | 6_2:-498084 | Msa0903400:intron |
AGCAGTAGAGAGAGTGCACA+AGG | 0.564911 | 6_2:-497765 | Msa0903400:CDS |
CAATATTGTGACTGGTGTTG+TGG | 0.567080 | 6_2:-493801 | Msa0903400:CDS |
TGAACTTTGTCCAGCATGTG+TGG | 0.567125 | 6_2:+500285 | None:intergenic |
CTTAATTATCAGGAAGACGA+GGG | 0.570502 | 6_2:-497928 | Msa0903400:intron |
ATAGTAGGCCTGATAGTTTG+AGG | 0.572925 | 6_2:-497709 | Msa0903400:CDS |
AGGCTAAAGCAGCTATTCAA+AGG | 0.574781 | 6_2:-498344 | Msa0903400:CDS |
GGAAAAGCCGGTGTAACGGA+AGG | 0.576127 | 6_2:-502117 | Msa0903400:CDS |
ATGTCAAAGGAAGGGCAAAA+GGG | 0.576733 | 6_2:-493733 | Msa0903400:CDS |
GAGGGTGTGGGAATTAGAAG+AGG | 0.578823 | 6_2:+502536 | None:intergenic |
GGTTGGAAAAGCCGGTGTAA+CGG | 0.579572 | 6_2:-502121 | Msa0903400:CDS |
GGCGGAGCTATGTTGATGTG+AGG | 0.580983 | 6_2:-493363 | Msa0903400:three_prime_UTR |
CAATTGACCAAAGAGATTGA+AGG | 0.582141 | 6_2:-493241 | Msa0903400:three_prime_UTR |
ATGACCACATTGAAGAGACT+TGG | 0.585752 | 6_2:-500004 | Msa0903400:CDS |
GCGGAATTGAGTTTGACGGA+TGG | 0.586016 | 6_2:-502195 | Msa0903400:CDS |
GCCGATAAACTCCATTCCCT+CGG | 0.587010 | 6_2:-502489 | Msa0903400:CDS |
TCTCCGGTGTGCTCCAGCTG+AGG | 0.587807 | 6_2:+502334 | None:intergenic |
CTAAATCCAGGAATAACGGC+AGG | 0.590887 | 6_2:+500082 | None:intergenic |
CAACATTTCATGGATAATGG+AGG | 0.590890 | 6_2:+502659 | None:intergenic |
GGCGGAATCAGGGAGGGTGT+GGG | 0.593012 | 6_2:+502524 | None:intergenic |
GAAGTAGACAGCTTGTTAGA+GGG | 0.594691 | 6_2:-500169 | Msa0903400:CDS |
AACATTTCATGGATAATGGA+GGG | 0.595579 | 6_2:+502660 | None:intergenic |
TCTACTTACAAAGCAAGTGA+AGG | 0.596434 | 6_2:-494736 | Msa0903400:CDS |
CATAGTTAATGTCAAAGGAA+GGG | 0.599927 | 6_2:-493741 | Msa0903400:CDS |
ACCTATACAAGAGCAGCACA+TGG | 0.601422 | 6_2:-495033 | Msa0903400:CDS |
AAACTCAATTCCGCTAAAGT+CGG | 0.604156 | 6_2:+502204 | None:intergenic |
GGTGTGGGAATTAGAAGAGG+AGG | 0.604178 | 6_2:+502539 | None:intergenic |
ACTGCACACCATATGGAAGT+AGG | 0.605649 | 6_2:+500047 | None:intergenic |
AAGTCACCTAGCAACAAGAA+GGG | 0.606277 | 6_2:+498078 | None:intergenic |
TGGTGTTGTGGAAACAATCA+AGG | 0.607238 | 6_2:-493789 | Msa0903400:CDS |
AAGCAACCTATCGTTCCCAT+AGG | 0.607489 | 6_2:-494263 | Msa0903400:intron |
GCCAACAGAAATTGGAGTGG+CGG | 0.607681 | 6_2:-493141 | Msa0903400:three_prime_UTR |
AGAGGAAGAGGATTGGTCGG+TGG | 0.608643 | 6_2:+502452 | None:intergenic |
GCGGAGCTATGTTGATGTGA+GGG | 0.610348 | 6_2:-493362 | Msa0903400:three_prime_UTR |
GATTGGCGAAGGAGAAGGAG+AGG | 0.610415 | 6_2:-502248 | Msa0903400:CDS |
ATGGAGCTGATTGGTAGTGG+TGG | 0.611940 | 6_2:-495014 | Msa0903400:CDS |
GAACAAGAAATAGATAAAGA+GGG | 0.613399 | 6_2:-498153 | Msa0903400:CDS |
TAATGGAAGGAAGATTTCAC+CGG | 0.614501 | 6_2:+502398 | None:intergenic |
TGGTGTGCAGTCTAAGCTAA+CGG | 0.614716 | 6_2:-500035 | Msa0903400:CDS |
GCGAATAGTGAATTTAGAAG+GGG | 0.614784 | 6_2:+502563 | None:intergenic |
AAATAGGAAACTTCAAGGAG+TGG | 0.617096 | 6_2:-499642 | Msa0903400:CDS |
GCAGTAACAAACAGCAGGGG+CGG | 0.617707 | 6_2:-493381 | Msa0903400:exon |
TAAGGTCCGAGCTGTCTGGT+GGG | 0.620424 | 6_2:+497814 | None:intergenic |
AATATGCCCACCAGACAGCT+CGG | 0.621653 | 6_2:-497820 | Msa0903400:CDS |
GAATGCAGTAACAAACAGCA+GGG | 0.621685 | 6_2:-493385 | Msa0903400:exon |
ATCGTGGAAAGAATTATAGT+AGG | 0.621723 | 6_2:-497724 | Msa0903400:CDS |
CGACCTCAGCTGGAGCACAC+CGG | 0.626838 | 6_2:-502337 | Msa0903400:CDS |
CGGACCTTAGAGACAGAAAG+TGG | 0.629206 | 6_2:-497800 | Msa0903400:CDS |
GAAGCTATCAGAATTGAATG+TGG | 0.631056 | 6_2:-493407 | Msa0903400:CDS |
TTGAATGGCGGAATCAGGGA+GGG | 0.632430 | 6_2:+502518 | None:intergenic |
TGACCCAATGCAAAATGGCA+TGG | 0.633048 | 6_2:+499971 | None:intergenic |
TATGCGATCATTGTTTATCG+TGG | 0.634171 | 6_2:-497740 | Msa0903400:CDS |
TCTTAATTATCAGGAAGACG+AGG | 0.640344 | 6_2:-497929 | Msa0903400:intron |
GGATGAAGTGAGTGATTCTG+TGG | 0.645028 | 6_2:-494468 | Msa0903400:CDS |
TTTGTGGTTGATACTGGGCA+CGG | 0.649666 | 6_2:-494763 | Msa0903400:CDS |
GATCAGCATCAACAGGCACA+GGG | 0.653119 | 6_2:+500110 | None:intergenic |
TATGCAAAAGCAAAATCTCA+GGG | 0.657730 | 6_2:+493272 | None:intergenic |
AAGAAGAGAGATACATGTTG+CGG | 0.658097 | 6_2:-498122 | Msa0903400:CDS |
AGCAAAATCATACTTTACAG+GGG | 0.658465 | 6_2:-493524 | Msa0903400:CDS |
GAAAAGCCGGTGTAACGGAA+GGG | 0.660273 | 6_2:-502116 | Msa0903400:CDS |
GGAGTGTGTGTGGTAATGGA+AGG | 0.664230 | 6_2:+502385 | None:intergenic |
CCAGCTTTGGTACAAGGAGT+CGG | 0.664643 | 6_2:-500244 | Msa0903400:CDS |
ACCTTAGAGACAGAAAGTGG+TGG | 0.665098 | 6_2:-497797 | Msa0903400:CDS |
TATGGAAGTAGGCGAAAAGG+CGG | 0.665566 | 6_2:+500058 | None:intergenic |
CCCCACCAATCCGTAAATCG+AGG | 0.666641 | 6_2:+500139 | None:intergenic |
CTGATGGTTCCAGATCACAT+TGG | 0.670124 | 6_2:+494698 | None:intergenic |
TGGAAGGAAGATTTCACCGG+CGG | 0.678409 | 6_2:+502401 | None:intergenic |
GGTAGTGGTGGAGAATGTCA+AGG | 0.680634 | 6_2:-495002 | Msa0903400:CDS |
AATAGAGGCACAACGCCGTG+AGG | 0.680846 | 6_2:-497645 | Msa0903400:intron |
TTAATTATCAGGAAGACGAG+GGG | 0.682549 | 6_2:-497927 | Msa0903400:intron |
TCTCTGCAGTATCTGACTGG+AGG | 0.686060 | 6_2:-498585 | Msa0903400:intron |
ACACTCCCAAAACACCGCGT+CGG | 0.694080 | 6_2:-502369 | Msa0903400:CDS |
AGGAGAGTAGCTAAATACGG+AGG | 0.698681 | 6_2:-493461 | Msa0903400:CDS |
GCAGCCAACAGAAATTGGAG+TGG | 0.699697 | 6_2:-493144 | Msa0903400:three_prime_UTR |
TCTGCCAAGTCTCTTCAATG+TGG | 0.705419 | 6_2:+500000 | None:intergenic |
GTTGAATGGCGGAATCAGGG+AGG | 0.715019 | 6_2:+502517 | None:intergenic |
GGAAACCAACTCATGAACTG+AGG | 0.716010 | 6_2:+493709 | None:intergenic |
GCAGTAGAGAGAGTGCACAA+GGG | 0.717322 | 6_2:-497764 | Msa0903400:CDS |
AATGCAGTAACAAACAGCAG+GGG | 0.753017 | 6_2:-493384 | Msa0903400:exon |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAAAAAAAAAAAAAAAA+AGG | - | chr6_2:499181-499200 | Msa0903400:intron | 0.0% |
!! | TATTTAAATCTTAATTGAAT+TGG | + | chr6_2:496485-496504 | None:intergenic | 10.0% |
!! | TTCAATTAAGATTTAAATAA+TGG | - | chr6_2:496486-496505 | Msa0903400:intron | 10.0% |
!!! | TATTTTTTAAACAAATTTGA+GGG | - | chr6_2:499988-500007 | Msa0903400:CDS | 10.0% |
!!! | TTTTTTAGTTTGATTTTAGT+TGG | - | chr6_2:493644-493663 | Msa0903400:intron | 15.0% |
!!! | AATAAATTTTGTGTTGATTA+AGG | - | chr6_2:493733-493752 | Msa0903400:CDS | 15.0% |
!!! | ATAAATTTTGTGTTGATTAA+GGG | - | chr6_2:493734-493753 | Msa0903400:CDS | 15.0% |
!! | TATTATAAAACAGATTTGTA+GGG | + | chr6_2:496721-496740 | None:intergenic | 15.0% |
!!! | ATCAAATTTAAAACTGATTA+TGG | + | chr6_2:496781-496800 | None:intergenic | 15.0% |
!! | ATAGTTGATTATTCTAAATA+TGG | - | chr6_2:497562-497581 | Msa0903400:intron | 15.0% |
!!! | ATATTTTAAATAGCTTTTGA+AGG | + | chr6_2:497604-497623 | None:intergenic | 15.0% |
!!! | TTTTTAAAGAATAAAGGTTA+TGG | - | chr6_2:498340-498359 | Msa0903400:CDS | 15.0% |
!! | TAATCTCAAAATTGTAAAAT+GGG | + | chr6_2:499506-499525 | None:intergenic | 15.0% |
!!! | AATTTTGAGATTAGTATTTT+TGG | - | chr6_2:499513-499532 | Msa0903400:intron | 15.0% |
!! | CATTATAATTATAGATTCTT+AGG | - | chr6_2:499583-499602 | Msa0903400:CDS | 15.0% |
!!! | GTATTTTTTAAACAAATTTG+AGG | - | chr6_2:499987-500006 | Msa0903400:CDS | 15.0% |
!!! | ATTTTTTAAACAAATTTGAG+GGG | - | chr6_2:499989-500008 | Msa0903400:CDS | 15.0% |
!! | TAAATTTCATCAACAAATTA+GGG | - | chr6_2:500020-500039 | Msa0903400:CDS | 15.0% |
!!! | TATGTTTTAACTAATAAAAG+TGG | - | chr6_2:500662-500681 | Msa0903400:intron | 15.0% |
!!! | TTCGATTATAATTATTGATT+TGG | - | chr6_2:500764-500783 | Msa0903400:intron | 15.0% |
!! | TACAATATAATAATAACTCT+TGG | + | chr6_2:501446-501465 | None:intergenic | 15.0% |
!! | ATAATAATGAAAACAATTTC+AGG | + | chr6_2:501668-501687 | None:intergenic | 15.0% |
!! | ACGTCATAAAAAAAAAAAAT+GGG | + | chr6_2:502529-502548 | None:intergenic | 15.0% |
!! | AACGTCATAAAAAAAAAAAA+TGG | + | chr6_2:502530-502549 | None:intergenic | 15.0% |
!! | TTTGTAGGATTAATATGAAA+AGG | - | chr6_2:493559-493578 | Msa0903400:CDS | 20.0% |
!! | CAATCACTTCTATTTATTAT+CGG | + | chr6_2:494207-494226 | None:intergenic | 20.0% |
!!! | AGTGAAATAAAGTGATATTT+TGG | + | chr6_2:494930-494949 | None:intergenic | 20.0% |
!!! | TCTGTTTTCAAAGTTTTATA+TGG | - | chr6_2:494956-494975 | Msa0903400:intron | 20.0% |
!!! | AACAGAAATTATTGCTTTTT+TGG | - | chr6_2:494982-495001 | Msa0903400:CDS | 20.0% |
!! | AAATCATATTGGACAAATTA+AGG | + | chr6_2:495038-495057 | None:intergenic | 20.0% |
!!! | TTAATTTGTCCAATATGATT+TGG | - | chr6_2:495037-495056 | Msa0903400:CDS | 20.0% |
!!! | TAATTTGTCCAATATGATTT+GGG | - | chr6_2:495038-495057 | Msa0903400:CDS | 20.0% |
!! | ATAATCAGATTATTGTACAT+GGG | + | chr6_2:495067-495086 | None:intergenic | 20.0% |
!! | TATAATCAGATTATTGTACA+TGG | + | chr6_2:495068-495087 | None:intergenic | 20.0% |
!! | AGTAAAATAATATTGTACAG+AGG | - | chr6_2:495149-495168 | Msa0903400:intron | 20.0% |
!! | GTAAAATAATATTGTACAGA+GGG | - | chr6_2:495150-495169 | Msa0903400:intron | 20.0% |
!! | ATTTCTTAACTTACCAAATA+TGG | - | chr6_2:495651-495670 | Msa0903400:intron | 20.0% |
!! | TTTCTTAACTTACCAAATAT+GGG | - | chr6_2:495652-495671 | Msa0903400:intron | 20.0% |
!! | CTTGTTCCTAAAATAATTTA+CGG | - | chr6_2:495778-495797 | Msa0903400:intron | 20.0% |
!!! | TTGTTTCCGTAAATTATTTT+AGG | + | chr6_2:495787-495806 | None:intergenic | 20.0% |
!! | ATAAACTATTTCAATAACTG+AGG | + | chr6_2:495848-495867 | None:intergenic | 20.0% |
!!! | TTTATGAAATTTTGTACTTG+TGG | - | chr6_2:496105-496124 | Msa0903400:intron | 20.0% |
!!! | ATATTTTGTATCTTAGCATT+TGG | - | chr6_2:496366-496385 | Msa0903400:intron | 20.0% |
!! | GTATTATAAAACAGATTTGT+AGG | + | chr6_2:496722-496741 | None:intergenic | 20.0% |
!!! | GTTTTATAATACCACAATTA+AGG | - | chr6_2:496730-496749 | Msa0903400:intron | 20.0% |
!!! | TTTTGAATGAACTTAAGTAA+CGG | - | chr6_2:496907-496926 | Msa0903400:intron | 20.0% |
!! | TAATTAAGAGAGAATTAATC+AGG | + | chr6_2:497648-497667 | None:intergenic | 20.0% |
!! | TTAATTCTCTCTTAATTATC+AGG | - | chr6_2:497650-497669 | Msa0903400:CDS | 20.0% |
!!! | TTGGCTTTTTTAAAGAATAA+AGG | - | chr6_2:498334-498353 | Msa0903400:CDS | 20.0% |
!! | CTAATCTACCATATAAAAAT+TGG | + | chr6_2:498528-498547 | None:intergenic | 20.0% |
!!! | ATTTTTATATGGTAGATTAG+TGG | - | chr6_2:498528-498547 | Msa0903400:CDS | 20.0% |
!! | CTCAATATAAAAATCTAAGA+TGG | - | chr6_2:498680-498699 | Msa0903400:intron | 20.0% |
!! | ATACTAACTCCTATTTATAA+GGG | + | chr6_2:499010-499029 | None:intergenic | 20.0% |
!! | AATACTAACTCCTATTTATA+AGG | + | chr6_2:499011-499030 | None:intergenic | 20.0% |
!! | AAATGAATTGAAACATCAAA+TGG | - | chr6_2:499298-499317 | Msa0903400:intron | 20.0% |
!! | CTAATCTCAAAATTGTAAAA+TGG | + | chr6_2:499507-499526 | None:intergenic | 20.0% |
!! | TTATAGATTCTTAGGATTAA+TGG | - | chr6_2:499591-499610 | Msa0903400:CDS | 20.0% |
!!! | TGTGTTTTTCTTTTAGAATA+TGG | - | chr6_2:499627-499646 | Msa0903400:CDS | 20.0% |
!!! | CTCTATTTTTTAAAAGACAT+TGG | - | chr6_2:499732-499751 | Msa0903400:intron | 20.0% |
!! | TTGTTAAGGATTCAAAAAAA+AGG | - | chr6_2:499778-499797 | Msa0903400:intron | 20.0% |
!! | GCTAAAAAATATATTTCCAA+AGG | + | chr6_2:499963-499982 | None:intergenic | 20.0% |
!!! | TTTTTTAAACAAATTTGAGG+GGG | - | chr6_2:499990-500009 | Msa0903400:CDS | 20.0% |
!! | GTAAATTTCATCAACAAATT+AGG | - | chr6_2:500019-500038 | Msa0903400:CDS | 20.0% |
!!! | ATGATTTCTGAAATATTGTT+TGG | - | chr6_2:500477-500496 | Msa0903400:CDS | 20.0% |
!!! | ATTGATTTGGTAATTTAATG+TGG | - | chr6_2:500777-500796 | Msa0903400:intron | 20.0% |
!!! | ATTGATTTCTTAAATTAACG+TGG | - | chr6_2:501088-501107 | Msa0903400:intron | 20.0% |
!! | ATTCTTAGTACAAAAGAATT+TGG | - | chr6_2:501577-501596 | Msa0903400:intron | 20.0% |
!! | TAAGAAAACAAAAAAGAGAT+GGG | + | chr6_2:501756-501775 | None:intergenic | 20.0% |
!! | ATAAGAAAACAAAAAAGAGA+TGG | + | chr6_2:501757-501776 | None:intergenic | 20.0% |
!! | ATTCAATGAGAAAAGAAAAA+GGG | + | chr6_2:501936-501955 | None:intergenic | 20.0% |
!! | AATTCAATGAGAAAAGAAAA+AGG | + | chr6_2:501937-501956 | None:intergenic | 20.0% |
!! | GGATTTAAGGAATAATTTAT+TGG | + | chr6_2:501977-501996 | None:intergenic | 20.0% |
!! | AAAACAAATTTCAGGATTTA+AGG | + | chr6_2:501990-502009 | None:intergenic | 20.0% |
!! | GATAGATAAAAACAAATTTC+AGG | + | chr6_2:501998-502017 | None:intergenic | 20.0% |
!! | ATTTGTATAACTCAACATTT+GGG | - | chr6_2:502481-502500 | Msa0903400:CDS | 20.0% |
!! | TCAGTTTGTATACATTATAT+CGG | + | chr6_2:502677-502696 | None:intergenic | 20.0% |
!!! | TTGATTTTAGTTGGTTGAAT+TGG | - | chr6_2:493653-493672 | Msa0903400:intron | 25.0% |
! | TGGATAAATAGATTAGTGAT+AGG | - | chr6_2:493673-493692 | Msa0903400:intron | 25.0% |
! | TTTATTCAATGAAGATTACG+AGG | - | chr6_2:493925-493944 | Msa0903400:intron | 25.0% |
!! | ATAGTTACTTAGGATTTGTT+TGG | + | chr6_2:494134-494153 | None:intergenic | 25.0% |
!!! | TTTTGAACTTTGAAGTTATC+TGG | - | chr6_2:494335-494354 | Msa0903400:CDS | 25.0% |
!! | TTACAAACTTGTTTACATGA+AGG | + | chr6_2:494467-494486 | None:intergenic | 25.0% |
! | TGATTTACAGTTTGATAAGT+TGG | - | chr6_2:494743-494762 | Msa0903400:CDS | 25.0% |
!! | TTCATATTACTTTGTTTCCT+AGG | - | chr6_2:494852-494871 | Msa0903400:intron | 25.0% |
!!! | TATTTTGGCAATTAGAAAGA+AGG | + | chr6_2:494915-494934 | None:intergenic | 25.0% |
! | ATTTATCTGAGCTTATCTTA+TGG | - | chr6_2:495706-495725 | Msa0903400:intron | 25.0% |
!!! | TTATTTTAGGAACAAGTCAT+GGG | + | chr6_2:495774-495793 | None:intergenic | 25.0% |
!!! | ATTATTTTAGGAACAAGTCA+TGG | + | chr6_2:495775-495794 | None:intergenic | 25.0% |
!!! | TTTGTTTTACAGGTAGAAAT+AGG | - | chr6_2:495930-495949 | Msa0903400:intron | 25.0% |
! | GAATACTAGCAATAAGAAAA+TGG | - | chr6_2:496036-496055 | Msa0903400:intron | 25.0% |
! | GGTTTAAATATAATGCTAAG+AGG | - | chr6_2:496126-496145 | Msa0903400:intron | 25.0% |
!! | AAGCAATGTCGTTTATTATT+TGG | - | chr6_2:496233-496252 | Msa0903400:intron | 25.0% |
! | AGAAAAGAAACTCAATTCAA+AGG | + | chr6_2:496307-496326 | None:intergenic | 25.0% |
! | TAATGGTGTAATACAACAAT+CGG | + | chr6_2:496393-496412 | None:intergenic | 25.0% |
! | TTATAATACCACAATTAAGG+TGG | - | chr6_2:496733-496752 | Msa0903400:intron | 25.0% |
!! | GAAGTTATTGTCATTTATAG+AGG | - | chr6_2:497048-497067 | Msa0903400:intron | 25.0% |
!! | TATTGTCATTTATAGAGGAA+AGG | - | chr6_2:497053-497072 | Msa0903400:intron | 25.0% |
!!! | CATCAATAATGGTTTTTCAA+TGG | + | chr6_2:497223-497242 | None:intergenic | 25.0% |
! | TGAAAAACCATTATTGATGA+AGG | - | chr6_2:497224-497243 | Msa0903400:intron | 25.0% |
! | AGAACAAGAAATAGATAAAG+AGG | - | chr6_2:497434-497453 | Msa0903400:intron | 25.0% |
! | GAACAAGAAATAGATAAAGA+GGG | - | chr6_2:497435-497454 | Msa0903400:intron | 25.0% |
! | AATATGTAATCAAGAAAGTG+TGG | - | chr6_2:497745-497764 | Msa0903400:CDS | 25.0% |
!!! | TTTTTATTTAGAAGTGTTCG+CGG | + | chr6_2:497905-497924 | None:intergenic | 25.0% |
! | TAGTATTTGACTATTTGTGT+TGG | - | chr6_2:497985-498004 | Msa0903400:intron | 25.0% |
! | AAAAGAGAATAAGGGTAAAA+GGG | - | chr6_2:498044-498063 | Msa0903400:intron | 25.0% |
! | TAAAAGTCTCACATTGAATT+AGG | - | chr6_2:498796-498815 | Msa0903400:intron | 25.0% |
!! | GATATCTTAGAATTTGAGTT+TGG | + | chr6_2:498893-498912 | None:intergenic | 25.0% |
!! | TTGTGATTAGTTCTTGATTT+AGG | - | chr6_2:498970-498989 | Msa0903400:intron | 25.0% |
!! | AAGTGTGGAATTTTAGATAA+AGG | + | chr6_2:499102-499121 | None:intergenic | 25.0% |
! | AATGATAACAATCCTAAATG+AGG | + | chr6_2:499147-499166 | None:intergenic | 25.0% |
!! | AATTTTCAACAGTGATTGAA+GGG | + | chr6_2:499362-499381 | None:intergenic | 25.0% |
! | GTGAATTTATTCAACTGAAT+AGG | - | chr6_2:499382-499401 | Msa0903400:intron | 25.0% |
!!! | ATTAGTATTTTTGGCAAATC+AGG | - | chr6_2:499522-499541 | Msa0903400:intron | 25.0% |
!! | TTTAGAATATGGTCTACAAT+AGG | - | chr6_2:499638-499657 | Msa0903400:CDS | 25.0% |
! | AACATATTCAATGTACCAAA+GGG | - | chr6_2:499661-499680 | Msa0903400:intron | 25.0% |
! | TAAAAGACATTGGTCAAAAA+AGG | - | chr6_2:499742-499761 | Msa0903400:intron | 25.0% |
! | AACAAATGATAAGTTTGATG+TGG | - | chr6_2:499802-499821 | Msa0903400:intron | 25.0% |
!! | CAAAGTGGAAATTTTATCTT+CGG | + | chr6_2:499871-499890 | None:intergenic | 25.0% |
! | GTAATCTCTTTACATGTAAT+GGG | + | chr6_2:500189-500208 | None:intergenic | 25.0% |
! | AGTAATCTCTTTACATGTAA+TGG | + | chr6_2:500190-500209 | None:intergenic | 25.0% |
! | GAGATTACTTGCAAAATAAA+AGG | - | chr6_2:500201-500220 | Msa0903400:CDS | 25.0% |
! | ATTTGTAAAAATGTTGCAAG+TGG | - | chr6_2:500259-500278 | Msa0903400:CDS | 25.0% |
! | AATCATACTAGTGATATCAT+TGG | + | chr6_2:500448-500467 | None:intergenic | 25.0% |
! | AATTTAATGTGGATTTCAGT+TGG | - | chr6_2:500788-500807 | Msa0903400:intron | 25.0% |
! | TTTGAATTCTCATTTATCAC+AGG | + | chr6_2:500918-500937 | None:intergenic | 25.0% |
! | ATCGATCACATCATTTAAAA+GGG | - | chr6_2:501186-501205 | Msa0903400:intron | 25.0% |
!! | ATTGAACTCTTATTTATCAC+CGG | + | chr6_2:501229-501248 | None:intergenic | 25.0% |
!! | ACATCATAAGTCTATCTTTT+AGG | - | chr6_2:501406-501425 | Msa0903400:intron | 25.0% |
! | TATGCTAATAAAACAGACAA+TGG | + | chr6_2:501525-501544 | None:intergenic | 25.0% |
!!! | CTCTTTTTTGTTTTCTTATC+AGG | - | chr6_2:501758-501777 | Msa0903400:intron | 25.0% |
! | TGACATTAACTATGACAAAA+GGG | + | chr6_2:501841-501860 | None:intergenic | 25.0% |
! | TTGACATTAACTATGACAAA+AGG | + | chr6_2:501842-501861 | None:intergenic | 25.0% |
! | TTTGTCATAGTTAATGTCAA+AGG | - | chr6_2:501842-501861 | Msa0903400:intron | 25.0% |
! | TTCAATGAGAAAAGAAAAAG+GGG | + | chr6_2:501935-501954 | None:intergenic | 25.0% |
!! | TTTTTATCTATCATACTTGC+AGG | - | chr6_2:502006-502025 | Msa0903400:intron | 25.0% |
! | TAGCAAAATCATACTTTACA+GGG | - | chr6_2:502063-502082 | Msa0903400:CDS | 25.0% |
!!! | GTGTGATTTTTTAAAGTTCA+GGG | + | chr6_2:502266-502285 | None:intergenic | 25.0% |
!!! | TGTGTGATTTTTTAAAGTTC+AGG | + | chr6_2:502267-502286 | None:intergenic | 25.0% |
! | AAATGTGTTGAAGAAGAAAA+TGG | - | chr6_2:502374-502393 | Msa0903400:CDS | 25.0% |
! | GATTTGTATAACTCAACATT+TGG | - | chr6_2:502480-502499 | Msa0903400:CDS | 25.0% |
!! | AACATTTCATGGATAATGGA+GGG | + | chr6_2:492931-492950 | None:intergenic | 30.0% |
AAGCAACATTTCATGGATAA+TGG | + | chr6_2:492935-492954 | None:intergenic | 30.0% | |
AAATGAAAAGGGAAGAAGAA+TGG | + | chr6_2:492997-493016 | None:intergenic | 30.0% | |
TGCGAATAGTGAATTTAGAA+GGG | + | chr6_2:493029-493048 | None:intergenic | 30.0% | |
TGAAATGAAGCAGAAGATTA+AGG | - | chr6_2:493446-493465 | Msa0903400:CDS | 30.0% | |
TTAATGGAATTCATGAACGT+TGG | - | chr6_2:493499-493518 | Msa0903400:CDS | 30.0% | |
! | GAAAAGGACTCATGATATTT+TGG | - | chr6_2:493575-493594 | Msa0903400:intron | 30.0% |
ATAAGCATGTGAGAAAATGA+CGG | - | chr6_2:494043-494062 | Msa0903400:intron | 30.0% | |
AACAAAAAAAAAGACCCGTT+TGG | + | chr6_2:494072-494091 | None:intergenic | 30.0% | |
GGTATCATATATATCTGTGT+TGG | - | chr6_2:494356-494375 | Msa0903400:CDS | 30.0% | |
TATATATCTGTGTTGGAAGT+AGG | - | chr6_2:494363-494382 | Msa0903400:CDS | 30.0% | |
TTTCATTTCAGACATGAATC+TGG | + | chr6_2:494392-494411 | None:intergenic | 30.0% | |
! | TTTGTAAAATTTTGCTACCG+TGG | - | chr6_2:494480-494499 | Msa0903400:intron | 30.0% |
ACCAGCTGCTTATATAAAAA+AGG | - | chr6_2:494583-494602 | Msa0903400:intron | 30.0% | |
!!! | ACCTTTTTTATATAAGCAGC+TGG | + | chr6_2:494587-494606 | None:intergenic | 30.0% |
! | TTTACAGTTTGATAAGTTGG+AGG | - | chr6_2:494746-494765 | Msa0903400:CDS | 30.0% |
AAACGCATCACTTGAAAATT+GGG | + | chr6_2:494800-494819 | None:intergenic | 30.0% | |
AAAACGCATCACTTGAAAAT+TGG | + | chr6_2:494801-494820 | None:intergenic | 30.0% | |
!! | AAAAAGTGCTTTGCAACATA+TGG | - | chr6_2:495223-495242 | Msa0903400:intron | 30.0% |
TGAACTCATTTCAGATGAAT+GGG | + | chr6_2:495282-495301 | None:intergenic | 30.0% | |
AGTTGAAATCTCACTCTATT+GGG | + | chr6_2:495374-495393 | None:intergenic | 30.0% | |
! | TGAGTACTTTTGTAAGTGTT+TGG | - | chr6_2:495731-495750 | Msa0903400:intron | 30.0% |
! | GAGTACTTTTGTAAGTGTTT+GGG | - | chr6_2:495732-495751 | Msa0903400:intron | 30.0% |
ACTATTTCAATAACTGAGGT+TGG | + | chr6_2:495844-495863 | None:intergenic | 30.0% | |
TTACATGACAAGCTCTTATT+CGG | - | chr6_2:495878-495897 | Msa0903400:intron | 30.0% | |
!!! | CTGTAGTTCTTTTGTTTTAC+AGG | - | chr6_2:495920-495939 | Msa0903400:intron | 30.0% |
GTCAATATTGCAGTAAAAAG+AGG | - | chr6_2:496007-496026 | Msa0903400:intron | 30.0% | |
! | ATTTGGAATATTGAGTAGCA+AGG | - | chr6_2:496250-496269 | Msa0903400:intron | 30.0% |
! | GAAATGAAAGTATGTTGTGT+TGG | - | chr6_2:496453-496472 | Msa0903400:intron | 30.0% |
! | CAAGTATTGCATTGTATAGA+AGG | - | chr6_2:496629-496648 | Msa0903400:intron | 30.0% |
TAAAACAGATTTGTAGGGTT+AGG | + | chr6_2:496716-496735 | None:intergenic | 30.0% | |
!!! | AAGTAACGGTCTTATTTTAC+AGG | - | chr6_2:496921-496940 | Msa0903400:intron | 30.0% |
AGACTGAAGTTGAGATATAA+TGG | + | chr6_2:496968-496987 | None:intergenic | 30.0% | |
TAACTTCTTTATTCCGAGAA+AGG | + | chr6_2:497035-497054 | None:intergenic | 30.0% | |
! | AGATTCTGAAAGAAAGCATA+TGG | - | chr6_2:497176-497195 | Msa0903400:intron | 30.0% |
!! | ACTTGTTACTTTAGAGTTAC+TGG | - | chr6_2:497325-497344 | Msa0903400:intron | 30.0% |
! | TGAAAAACTTCTAGAAAGTC+TGG | - | chr6_2:497392-497411 | Msa0903400:intron | 30.0% |
TGGAAAATATGCATCTTCAT+TGG | - | chr6_2:497699-497718 | Msa0903400:CDS | 30.0% | |
TGCATCTTCATTGGAAATAT+CGG | - | chr6_2:497708-497727 | Msa0903400:CDS | 30.0% | |
ATCGTGGAAAGAATTATAGT+AGG | - | chr6_2:497864-497883 | Msa0903400:CDS | 30.0% | |
TCCTTTGTGAAAAGAGAATA+AGG | - | chr6_2:498035-498054 | Msa0903400:intron | 30.0% | |
CCTTTGTGAAAAGAGAATAA+GGG | - | chr6_2:498036-498055 | Msa0903400:intron | 30.0% | |
GAAAAGAGAATAAGGGTAAA+AGG | - | chr6_2:498043-498062 | Msa0903400:intron | 30.0% | |
! | GAGCACATCCAATTTTTATA+TGG | - | chr6_2:498517-498536 | Msa0903400:CDS | 30.0% |
GCTTGAAAATGACCTTATAA+GGG | - | chr6_2:498608-498627 | Msa0903400:intron | 30.0% | |
CTTGAAAATGACCTTATAAG+GGG | - | chr6_2:498609-498628 | Msa0903400:intron | 30.0% | |
ATAATCCATACTTAACAAGC+TGG | - | chr6_2:498635-498654 | Msa0903400:intron | 30.0% | |
AAAGTTTCATAGTGTCTCTT+AGG | - | chr6_2:498924-498943 | Msa0903400:intron | 30.0% | |
! | TGTGGAATTTTAGATAAAGG+AGG | + | chr6_2:499099-499118 | None:intergenic | 30.0% |
TCAGGAACATAATAGAAGTA+AGG | + | chr6_2:499332-499351 | None:intergenic | 30.0% | |
! | CAATTTTCAACAGTGATTGA+AGG | + | chr6_2:499363-499382 | None:intergenic | 30.0% |
CTCAAAATTGTAAAATGGGA+AGG | + | chr6_2:499502-499521 | None:intergenic | 30.0% | |
GAACATATTCAATGTACCAA+AGG | - | chr6_2:499660-499679 | Msa0903400:intron | 30.0% | |
GTCATTTAAGCATTCCTAAA+GGG | + | chr6_2:499698-499717 | None:intergenic | 30.0% | |
! | TGTCATTTAAGCATTCCTAA+AGG | + | chr6_2:499699-499718 | None:intergenic | 30.0% |
! | ATTTATGCATACCTTTGGAA+AGG | - | chr6_2:500084-500103 | Msa0903400:CDS | 30.0% |
TAAAAATGTTGCAAGTGGTA+CGG | - | chr6_2:500264-500283 | Msa0903400:CDS | 30.0% | |
AGTCTCTTACTTTGTAGTAA+TGG | - | chr6_2:500354-500373 | Msa0903400:CDS | 30.0% | |
CTGATAATCCAAAAGATGAT+AGG | + | chr6_2:500699-500718 | None:intergenic | 30.0% | |
! | TCATCTTTTGGATTATCAGT+TGG | - | chr6_2:500700-500719 | Msa0903400:intron | 30.0% |
!! | AATGATTTTGTGGTTGATAC+TGG | - | chr6_2:500819-500838 | Msa0903400:intron | 30.0% |
!! | ATGATTTTGTGGTTGATACT+GGG | - | chr6_2:500820-500839 | Msa0903400:intron | 30.0% |
AAATTAACGTGGATTTCAGT+TGG | - | chr6_2:501099-501118 | Msa0903400:intron | 30.0% | |
CATCGATCACATCATTTAAA+AGG | - | chr6_2:501185-501204 | Msa0903400:intron | 30.0% | |
GAGCTGAAAATTATACCTAT+GGG | + | chr6_2:501343-501362 | None:intergenic | 30.0% | |
AGAGCTGAAAATTATACCTA+TGG | + | chr6_2:501344-501363 | None:intergenic | 30.0% | |
!!! | TCTATTTCTCTTTGTTTTCC+TGG | - | chr6_2:501703-501722 | Msa0903400:intron | 30.0% |
! | AAACAATCAAGGATCTTTTG+CGG | - | chr6_2:501810-501829 | Msa0903400:intron | 30.0% |
TCATAGTTAATGTCAAAGGA+AGG | - | chr6_2:501846-501865 | Msa0903400:intron | 30.0% | |
CATAGTTAATGTCAAAGGAA+GGG | - | chr6_2:501847-501866 | Msa0903400:intron | 30.0% | |
! | CTGTAAAGTATGATTTTGCT+AGG | + | chr6_2:502064-502083 | None:intergenic | 30.0% |
CTAGCAAAATCATACTTTAC+AGG | - | chr6_2:502062-502081 | Msa0903400:CDS | 30.0% | |
AGCAAAATCATACTTTACAG+GGG | - | chr6_2:502064-502083 | Msa0903400:CDS | 30.0% | |
TATGCAAAAGCAAAATCTCA+GGG | + | chr6_2:502319-502338 | None:intergenic | 30.0% | |
TTCAATCTCTTTGGTCAATT+GGG | + | chr6_2:502348-502367 | None:intergenic | 30.0% | |
AATTGACCAAAGAGATTGAA+GGG | - | chr6_2:502348-502367 | Msa0903400:CDS | 30.0% | |
AAAAAAAAAATGGGCCATTG+AGG | + | chr6_2:502520-502539 | None:intergenic | 30.0% | |
! | CAACATTTCATGGATAATGG+AGG | + | chr6_2:492932-492951 | None:intergenic | 35.0% |
! | TGAATTTAGAAGGGGTTTTG+GGG | + | chr6_2:493020-493039 | None:intergenic | 35.0% |
! | GTGAATTTAGAAGGGGTTTT+GGG | + | chr6_2:493021-493040 | None:intergenic | 35.0% |
! | AGTGAATTTAGAAGGGGTTT+TGG | + | chr6_2:493022-493041 | None:intergenic | 35.0% |
GCGAATAGTGAATTTAGAAG+GGG | + | chr6_2:493028-493047 | None:intergenic | 35.0% | |
GTGCGAATAGTGAATTTAGA+AGG | + | chr6_2:493030-493049 | None:intergenic | 35.0% | |
TAATGGAAGGAAGATTTCAC+CGG | + | chr6_2:493193-493212 | None:intergenic | 35.0% | |
AAACTCAATTCCGCTAAAGT+CGG | + | chr6_2:493387-493406 | None:intergenic | 35.0% | |
TTTAGCGGAATTGAGTTTGA+CGG | - | chr6_2:493389-493408 | Msa0903400:exon | 35.0% | |
ATATTGAGGTTGAGGGAATT+AGG | - | chr6_2:493420-493439 | Msa0903400:CDS | 35.0% | |
TATTGAGGTTGAGGGAATTA+GGG | - | chr6_2:493421-493440 | Msa0903400:CDS | 35.0% | |
ATGAAGCAGAAGATTAAGGT+TGG | - | chr6_2:493450-493469 | Msa0903400:CDS | 35.0% | |
AAGATTAAGGTTGGAAAAGC+CGG | - | chr6_2:493459-493478 | Msa0903400:CDS | 35.0% | |
TTGTTTGTGAGGATCTTTGT+AGG | - | chr6_2:493544-493563 | Msa0903400:CDS | 35.0% | |
!! | AAGGACTCATGATATTTTGG+AGG | - | chr6_2:493578-493597 | Msa0903400:intron | 35.0% |
! | TAGCGGATAATTGATAAGCT+AGG | - | chr6_2:493760-493779 | Msa0903400:CDS | 35.0% |
ATTGATAAGCTAGGTGATAG+CGG | - | chr6_2:493769-493788 | Msa0903400:CDS | 35.0% | |
AGAAAATGACGGTTACCAAA+CGG | - | chr6_2:494054-494073 | Msa0903400:intron | 35.0% | |
TGTTCGCTTCATAGTTACTT+AGG | + | chr6_2:494144-494163 | None:intergenic | 35.0% | |
! | ACACGTCTTCAATCTGAAAT+GGG | - | chr6_2:494271-494290 | Msa0903400:CDS | 35.0% |
GATTCCAAAACTCATTTCCA+CGG | + | chr6_2:494500-494519 | None:intergenic | 35.0% | |
! | TCAATCGTATTTTACCAGCT+TGG | + | chr6_2:494538-494557 | None:intergenic | 35.0% |
! | GTTTTCACACGTGACTTTTT+TGG | - | chr6_2:494605-494624 | Msa0903400:intron | 35.0% |
!! | CCAATTCTTAAGAAGTGTCA+TGG | + | chr6_2:494641-494660 | None:intergenic | 35.0% |
CCATGACACTTCTTAAGAAT+TGG | - | chr6_2:494638-494657 | Msa0903400:CDS | 35.0% | |
CAATTTAATCGCTTGTGCAT+GGG | + | chr6_2:494719-494738 | None:intergenic | 35.0% | |
TCAATTTAATCGCTTGTGCA+TGG | + | chr6_2:494720-494739 | None:intergenic | 35.0% | |
AACGCATCACTTGAAAATTG+GGG | + | chr6_2:494799-494818 | None:intergenic | 35.0% | |
TTGTCATGTCAGAGAAAAAC+TGG | - | chr6_2:495101-495120 | Msa0903400:intron | 35.0% | |
ACTTCATCTGATAGGAAGTA+AGG | + | chr6_2:495191-495210 | None:intergenic | 35.0% | |
CTCTCAAAACTTCATCTGAT+AGG | + | chr6_2:495199-495218 | None:intergenic | 35.0% | |
CTGAACTCATTTCAGATGAA+TGG | + | chr6_2:495283-495302 | None:intergenic | 35.0% | |
!!! | TTGTACCAAAGCTGGTTTTA+CGG | + | chr6_2:495339-495358 | None:intergenic | 35.0% |
CAGTTGAAATCTCACTCTAT+TGG | + | chr6_2:495375-495394 | None:intergenic | 35.0% | |
!!! | TTTACCATGCCATTTTGCAT+TGG | - | chr6_2:495613-495632 | Msa0903400:intron | 35.0% |
!!! | TTACCATGCCATTTTGCATT+GGG | - | chr6_2:495614-495633 | Msa0903400:intron | 35.0% |
AACTTACCAAATATGGGTCA+AGG | - | chr6_2:495658-495677 | Msa0903400:intron | 35.0% | |
ACTTACCAAATATGGGTCAA+GGG | - | chr6_2:495659-495678 | Msa0903400:intron | 35.0% | |
CAATAACTGAGGTTGGAATT+AGG | + | chr6_2:495837-495856 | None:intergenic | 35.0% | |
GGTAGAAATAGGAAACTTCA+AGG | - | chr6_2:495941-495960 | Msa0903400:intron | 35.0% | |
AAATAGGAAACTTCAAGGAG+TGG | - | chr6_2:495946-495965 | Msa0903400:intron | 35.0% | |
TGCTGCAATTATCAAGTTCT+GGG | - | chr6_2:495970-495989 | Msa0903400:intron | 35.0% | |
GAAAATGGCTGAAGAGATTA+AGG | - | chr6_2:496051-496070 | Msa0903400:intron | 35.0% | |
TATGTGTGCGATTCATGTTA+TGG | - | chr6_2:496192-496211 | Msa0903400:intron | 35.0% | |
TAACTCTCATCAACCATTGA+AGG | + | chr6_2:496284-496303 | None:intergenic | 35.0% | |
TTGAACCTGTGACCTATTAT+GGG | - | chr6_2:496547-496566 | Msa0903400:intron | 35.0% | |
ACAACAACTTCACCCATAAT+AGG | + | chr6_2:496562-496581 | None:intergenic | 35.0% | |
TATTATGGGTGAAGTTGTTG+TGG | - | chr6_2:496561-496580 | Msa0903400:intron | 35.0% | |
!!! | GTGGTGATACTTTTTTTACG+AGG | - | chr6_2:496595-496614 | Msa0903400:intron | 35.0% |
!!! | TTTTTTTACGAGGCCTAACT+TGG | - | chr6_2:496605-496624 | Msa0903400:intron | 35.0% |
ATGCAATACTTGTCCAAGTT+AGG | + | chr6_2:496621-496640 | None:intergenic | 35.0% | |
TTTGAAAGCCACCTTAATTG+TGG | + | chr6_2:496744-496763 | None:intergenic | 35.0% | |
CTTCAGCAATTAAACAGAGA+TGG | - | chr6_2:497097-497116 | Msa0903400:intron | 35.0% | |
! | GCTTTAGCCTTCATCAATAA+TGG | + | chr6_2:497234-497253 | None:intergenic | 35.0% |
! | TCAAAGGACTAGCATCAAAT+TGG | - | chr6_2:497260-497279 | Msa0903400:intron | 35.0% |
!! | TGTTACTTTAGAGTTACTGG+TGG | - | chr6_2:497328-497347 | Msa0903400:intron | 35.0% |
! | GTGGTATAGCTTTTACATAC+AGG | - | chr6_2:497347-497366 | Msa0903400:intron | 35.0% |
AAGAAGAGAGATACATGTTG+CGG | - | chr6_2:497466-497485 | Msa0903400:intron | 35.0% | |
TCTTAATTATCAGGAAGACG+AGG | - | chr6_2:497659-497678 | Msa0903400:CDS | 35.0% | |
CTTAATTATCAGGAAGACGA+GGG | - | chr6_2:497660-497679 | Msa0903400:CDS | 35.0% | |
TTAATTATCAGGAAGACGAG+GGG | - | chr6_2:497661-497680 | Msa0903400:CDS | 35.0% | |
GCATCTTCATTGGAAATATC+GGG | - | chr6_2:497709-497728 | Msa0903400:CDS | 35.0% | |
TATGCGATCATTGTTTATCG+TGG | - | chr6_2:497848-497867 | Msa0903400:CDS | 35.0% | |
! | ACGATGACAATTTTACCTCA+CGG | + | chr6_2:497961-497980 | None:intergenic | 35.0% |
! | TGTTGGAGTGTCAGATAATT+TGG | - | chr6_2:498002-498021 | Msa0903400:intron | 35.0% |
! | CCCTTATTCTCTTTTCACAA+AGG | + | chr6_2:498039-498058 | None:intergenic | 35.0% |
! | AACCAACTCTTTTCAGTGTT+TGG | - | chr6_2:498315-498334 | Msa0903400:intron | 35.0% |
GGCTTGAAAATGACCTTATA+AGG | - | chr6_2:498607-498626 | Msa0903400:intron | 35.0% | |
!! | CAAAACCAGCTTGTTAAGTA+TGG | + | chr6_2:498643-498662 | None:intergenic | 35.0% |
!! | CATACTTAACAAGCTGGTTT+TGG | - | chr6_2:498641-498660 | Msa0903400:intron | 35.0% |
!!! | TTAACAAGCTGGTTTTGGTT+AGG | - | chr6_2:498646-498665 | Msa0903400:intron | 35.0% |
!!! | GTTTTGGTTAGGATTGAGTT+AGG | - | chr6_2:498657-498676 | Msa0903400:intron | 35.0% |
CATGCTCAAGACTAAAAATC+TGG | + | chr6_2:498765-498784 | None:intergenic | 35.0% | |
ATCTGAAAATGACTTTGTGC+TGG | - | chr6_2:498824-498843 | Msa0903400:intron | 35.0% | |
GTCTATGTGCCCTTATAAAT+AGG | - | chr6_2:498998-499017 | Msa0903400:intron | 35.0% | |
TTGAAACATCAAATGGTGAG+CGG | - | chr6_2:499305-499324 | Msa0903400:intron | 35.0% | |
GATAGCTAAAGAGTTGAGAT+TGG | - | chr6_2:499430-499449 | Msa0903400:intron | 35.0% | |
TAAAGAGTTGAGATTGGACT+TGG | - | chr6_2:499436-499455 | Msa0903400:intron | 35.0% | |
! | ACTTGCTAAGAAGTTCAAAG+TGG | + | chr6_2:499886-499905 | None:intergenic | 35.0% |
! | TAGCATTGCCCTTTTGTAAA+AGG | - | chr6_2:499929-499948 | Msa0903400:intron | 35.0% |
!! | GTGCTATTTATGCATACCTT+TGG | - | chr6_2:500079-500098 | Msa0903400:CDS | 35.0% |
TTTGTCATGACTCAAGTACA+CGG | - | chr6_2:500323-500342 | Msa0903400:CDS | 35.0% | |
!! | ATATTGTTTGGTGCGATACA+AGG | - | chr6_2:500489-500508 | Msa0903400:intron | 35.0% |
! | TTTGGTTCATCAAGAAAGAC+AGG | - | chr6_2:500630-500649 | Msa0903400:intron | 35.0% |
! | TCTTAACGCCTATCATCTTT+TGG | - | chr6_2:500688-500707 | Msa0903400:intron | 35.0% |
GGTTATATCAAAGTTTCCTC+TGG | - | chr6_2:500721-500740 | Msa0903400:intron | 35.0% | |
!!! | TTTCCTCTGGCATCTTTTTT+TGG | - | chr6_2:500734-500753 | Msa0903400:intron | 35.0% |
TAACCAAAAAAAGATGCCAG+AGG | + | chr6_2:500740-500759 | None:intergenic | 35.0% | |
! | GGATGAAGTGAATGATTTTG+TGG | - | chr6_2:500809-500828 | Msa0903400:intron | 35.0% |
TCTACTTACAAAGCAAGTGA+AGG | - | chr6_2:500852-500871 | Msa0903400:intron | 35.0% | |
CATATCATTCCAATGTGATC+TGG | - | chr6_2:500881-500900 | Msa0903400:intron | 35.0% | |
! | AAACGAGTTTCCTTCTAGTT+TGG | - | chr6_2:500935-500954 | Msa0903400:intron | 35.0% |
TTTGGATGAACCAAACTAGA+AGG | + | chr6_2:500948-500967 | None:intergenic | 35.0% | |
! | TTTGGTTCATCCAAAAAGAC+AGG | - | chr6_2:500953-500972 | Msa0903400:intron | 35.0% |
ATTATCACGTGGTTACATCA+GGG | - | chr6_2:501036-501055 | Msa0903400:intron | 35.0% | |
TGTCTCAACTAACAATGCTA+TGG | - | chr6_2:501159-501178 | Msa0903400:intron | 35.0% | |
AAGAAGAAGTCTCTCTCTAT+TGG | + | chr6_2:501281-501300 | None:intergenic | 35.0% | |
!!! | AGGTTGCTTTTTCATCCTTA+AGG | + | chr6_2:501314-501333 | None:intergenic | 35.0% |
ATTATACCTATGGGAACGAT+AGG | + | chr6_2:501334-501353 | None:intergenic | 35.0% | |
GAAACGCACACAATACAAAA+GGG | + | chr6_2:501485-501504 | None:intergenic | 35.0% | |
AGAAACGCACACAATACAAA+AGG | + | chr6_2:501486-501505 | None:intergenic | 35.0% | |
! | TTTCCTGGAAGTATGCTAAT+TGG | - | chr6_2:501718-501737 | Msa0903400:intron | 35.0% |
! | TGGAAGTATGCTAATTGGAA+GGG | - | chr6_2:501723-501742 | Msa0903400:intron | 35.0% |
AAATCATACTTTACAGGGGT+TGG | - | chr6_2:502068-502087 | Msa0903400:CDS | 35.0% | |
AATCATACTTTACAGGGGTT+GGG | - | chr6_2:502069-502088 | Msa0903400:CDS | 35.0% | |
ATCACACCAACTCAATTCAT+AGG | - | chr6_2:502107-502126 | Msa0903400:CDS | 35.0% | |
TACTCTCCTATGAATTGAGT+TGG | + | chr6_2:502116-502135 | None:intergenic | 35.0% | |
CATAGGAGAGTAGCTAAATA+CGG | - | chr6_2:502124-502143 | Msa0903400:CDS | 35.0% | |
GAAGCTATCAGAATTGAATG+TGG | - | chr6_2:502181-502200 | Msa0903400:CDS | 35.0% | |
GTATGCAAAAGCAAAATCTC+AGG | + | chr6_2:502320-502339 | None:intergenic | 35.0% | |
CTTCAATCTCTTTGGTCAAT+TGG | + | chr6_2:502349-502368 | None:intergenic | 35.0% | |
CAATTGACCAAAGAGATTGA+AGG | - | chr6_2:502347-502366 | Msa0903400:CDS | 35.0% | |
TTTCTTCCCTTCAATCTCTT+TGG | + | chr6_2:502357-502376 | None:intergenic | 35.0% | |
! | GCTTTTGTACATAACCTCAA+TGG | - | chr6_2:502503-502522 | Msa0903400:CDS | 35.0% |
TCGTTGGAAGCAACATTTCA+TGG | + | chr6_2:492942-492961 | None:intergenic | 40.0% | |
!! | AAGGTGTTGAAGTTAGTCGT+TGG | + | chr6_2:492958-492977 | None:intergenic | 40.0% |
!!! | GGGTTTTGGGGAAATGAAAA+GGG | + | chr6_2:493008-493027 | None:intergenic | 40.0% |
AAGAAGAAGAGGAAGAGGAT+TGG | + | chr6_2:493146-493165 | None:intergenic | 40.0% | |
ATGGAGAGATATTGAGGTTG+AGG | - | chr6_2:493412-493431 | Msa0903400:CDS | 40.0% | |
TGGAGAGATATTGAGGTTGA+GGG | - | chr6_2:493413-493432 | Msa0903400:CDS | 40.0% | |
! | GTAACGGAAGGGATTGTTAA+TGG | - | chr6_2:493483-493502 | Msa0903400:CDS | 40.0% |
AGTTGTTAGGGTTGTTTGTG+AGG | - | chr6_2:493533-493552 | Msa0903400:CDS | 40.0% | |
!! | GTGTTGATTAAGGGTTGTAG+CGG | - | chr6_2:493743-493762 | Msa0903400:CDS | 40.0% |
GAAAATGACGGTTACCAAAC+GGG | - | chr6_2:494055-494074 | Msa0903400:intron | 40.0% | |
TAACTATGAAGCGAACACAG+CGG | - | chr6_2:494147-494166 | Msa0903400:intron | 40.0% | |
! | CTACGTATCACTGTTGGTAA+TGG | + | chr6_2:494181-494200 | None:intergenic | 40.0% |
CACACGTCTTCAATCTGAAA+TGG | - | chr6_2:494270-494289 | Msa0903400:CDS | 40.0% | |
! | CACGTCTTCAATCTGAAATG+GGG | - | chr6_2:494272-494291 | Msa0903400:CDS | 40.0% |
AACATCATAATGTGCCAAGC+TGG | - | chr6_2:494521-494540 | Msa0903400:intron | 40.0% | |
!!! | TTCACACGTGACTTTTTTGG+TGG | - | chr6_2:494608-494627 | Msa0903400:intron | 40.0% |
AACCTTGTAAGCAACACCTA+TGG | - | chr6_2:494666-494685 | Msa0903400:CDS | 40.0% | |
ACCTTGTAAGCAACACCTAT+GGG | - | chr6_2:494667-494686 | Msa0903400:CDS | 40.0% | |
!! | TTGGAGGTGTCAAGTTGATA+GGG | - | chr6_2:494762-494781 | Msa0903400:CDS | 40.0% |
ACGCATCACTTGAAAATTGG+GGG | + | chr6_2:494798-494817 | None:intergenic | 40.0% | |
TCCTAGGCTAGATATTCTGA+AGG | - | chr6_2:494868-494887 | Msa0903400:intron | 40.0% | |
TCCTTCAGAATATCTAGCCT+AGG | + | chr6_2:494872-494891 | None:intergenic | 40.0% | |
ATGGGACACCCAAATCATAT+TGG | + | chr6_2:495049-495068 | None:intergenic | 40.0% | |
TCATGTCAGAGAAAAACTGG+AGG | - | chr6_2:495104-495123 | Msa0903400:intron | 40.0% | |
!! | AAACTGGAGGACTTGTTGTT+TGG | - | chr6_2:495117-495136 | Msa0903400:intron | 40.0% |
CAAAACCGTAAAACCAGCTT+TGG | - | chr6_2:495331-495350 | Msa0903400:intron | 40.0% | |
! | GTAAAACCAGCTTTGGTACA+AGG | - | chr6_2:495338-495357 | Msa0903400:intron | 40.0% |
!! | AGAAGTAGACAGCTTGTTAG+AGG | - | chr6_2:495418-495437 | Msa0903400:intron | 40.0% |
!! | GAAGTAGACAGCTTGTTAGA+GGG | - | chr6_2:495419-495438 | Msa0903400:intron | 40.0% |
ATGACCACATTGAAGAGACT+TGG | - | chr6_2:495584-495603 | Msa0903400:intron | 40.0% | |
CAAACTGACCCAATGCAAAA+TGG | + | chr6_2:495625-495644 | None:intergenic | 40.0% | |
CTGCTGCAATTATCAAGTTC+TGG | - | chr6_2:495969-495988 | Msa0903400:intron | 40.0% | |
CACATAACACCAAAAAGAGC+AGG | + | chr6_2:496178-496197 | None:intergenic | 40.0% | |
CAAGGATATGTCACCTTCAA+TGG | - | chr6_2:496268-496287 | Msa0903400:intron | 40.0% | |
!! | TTTTGGGTGACAAGAGGTAA+TGG | + | chr6_2:496410-496429 | None:intergenic | 40.0% |
! | TTGTCACCCAAAATGATGGA+CGG | - | chr6_2:496417-496436 | Msa0903400:intron | 40.0% |
! | TCAACACCGTCCATCATTTT+GGG | + | chr6_2:496426-496445 | None:intergenic | 40.0% |
! | TTCAACACCGTCCATCATTT+TGG | + | chr6_2:496427-496446 | None:intergenic | 40.0% |
GTTGAACCTGTGACCTATTA+TGG | - | chr6_2:496546-496565 | Msa0903400:intron | 40.0% | |
AGGTCAACACTATCGAACAT+TGG | + | chr6_2:496663-496682 | None:intergenic | 40.0% | |
CAGATTTGTAGGGTTAGGTT+AGG | + | chr6_2:496711-496730 | None:intergenic | 40.0% | |
ATTTGATTGCATCGCTGATC+TGG | - | chr6_2:496794-496813 | Msa0903400:intron | 40.0% | |
AGGCTAAAGCAGCTATTCAA+AGG | - | chr6_2:497244-497263 | Msa0903400:intron | 40.0% | |
AGATACATGTTGCGGAGAAT+TGG | - | chr6_2:497474-497493 | Msa0903400:intron | 40.0% | |
AAGTCACCTAGCAACAAGAA+GGG | + | chr6_2:497513-497532 | None:intergenic | 40.0% | |
AAAGTCACCTAGCAACAAGA+AGG | + | chr6_2:497514-497533 | None:intergenic | 40.0% | |
ATAGTAGGCCTGATAGTTTG+AGG | - | chr6_2:497879-497898 | Msa0903400:CDS | 40.0% | |
! | AGCATTGAAGCGTTCAATAG+AGG | - | chr6_2:497928-497947 | Msa0903400:intron | 40.0% |
AGAGAATAAGGGTAAAAGGG+TGG | - | chr6_2:498047-498066 | Msa0903400:intron | 40.0% | |
GAGAATAAGGGTAAAAGGGT+GGG | - | chr6_2:498048-498067 | Msa0903400:intron | 40.0% | |
!! | GAGAGTATTCTTTGCATGGT+TGG | - | chr6_2:498072-498091 | Msa0903400:intron | 40.0% |
AGCCAAACACTGAAAAGAGT+TGG | + | chr6_2:498320-498339 | None:intergenic | 40.0% | |
CAACTCCACTTAATGGGATA+AGG | + | chr6_2:498420-498439 | None:intergenic | 40.0% | |
CTTATCCCATTAAGTGGAGT+TGG | - | chr6_2:498418-498437 | Msa0903400:CDS | 40.0% | |
TGTAGCCAACTCCACTTAAT+GGG | + | chr6_2:498426-498445 | None:intergenic | 40.0% | |
ATGTAGCCAACTCCACTTAA+TGG | + | chr6_2:498427-498446 | None:intergenic | 40.0% | |
ATTAAGTGGAGTTGGCTACA+TGG | - | chr6_2:498426-498445 | Msa0903400:CDS | 40.0% | |
TATATCATCCAACGTGGACA+AGG | + | chr6_2:498586-498605 | None:intergenic | 40.0% | |
TGTCCACGTTGGATGATATA+AGG | - | chr6_2:498586-498605 | Msa0903400:intron | 40.0% | |
! | AAGCCTTATATCATCCAACG+TGG | + | chr6_2:498592-498611 | None:intergenic | 40.0% |
GAAAATGACCTTATAAGGGG+TGG | - | chr6_2:498612-498631 | Msa0903400:intron | 40.0% | |
TGGATTATCCACCCCTTATA+AGG | + | chr6_2:498623-498642 | None:intergenic | 40.0% | |
AGAGTCTATCATAGATCCGT+TGG | - | chr6_2:498707-498726 | Msa0903400:intron | 40.0% | |
!! | ACCTTACAGACGGTTTTGTA+TGG | - | chr6_2:498856-498875 | Msa0903400:intron | 40.0% |
!! | CCTTACAGACGGTTTTGTAT+GGG | - | chr6_2:498857-498876 | Msa0903400:intron | 40.0% |
!! | GGTTTTGTATGGGTTGAGTT+AGG | - | chr6_2:498867-498886 | Msa0903400:intron | 40.0% |
!! | TTATGAGGCTTGTTGAAGTG+TGG | + | chr6_2:499117-499136 | None:intergenic | 40.0% |
AAATGAGGCAGTCACTTATG+AGG | + | chr6_2:499132-499151 | None:intergenic | 40.0% | |
CATAAGTGACTGCCTCATTT+AGG | - | chr6_2:499132-499151 | Msa0903400:intron | 40.0% | |
CAAGATTGAAAGGAGTAAGG+TGG | + | chr6_2:499237-499256 | None:intergenic | 40.0% | |
CTGCAAGATTGAAAGGAGTA+AGG | + | chr6_2:499240-499259 | None:intergenic | 40.0% | |
CTTACTCCTTTCAATCTTGC+AGG | - | chr6_2:499238-499257 | Msa0903400:intron | 40.0% | |
!! | TGATTGAAGGGAAGTGTTTC+AGG | + | chr6_2:499350-499369 | None:intergenic | 40.0% |
TACATAGCCTTCATCCTCTT+TGG | + | chr6_2:499548-499567 | None:intergenic | 40.0% | |
TCCTTAACAAGTTCCCTTAG+CGG | + | chr6_2:499768-499787 | None:intergenic | 40.0% | |
!! | TGCCCTTTTGTAAAAGGCAT+TGG | - | chr6_2:499935-499954 | Msa0903400:intron | 40.0% |
!!! | GCCCTTTTGTAAAAGGCATT+GGG | - | chr6_2:499936-499955 | Msa0903400:intron | 40.0% |
! | CCCCAATGCCTTTTACAAAA+GGG | + | chr6_2:499940-499959 | None:intergenic | 40.0% |
!!! | CCCTTTTGTAAAAGGCATTG+GGG | - | chr6_2:499937-499956 | Msa0903400:intron | 40.0% |
TTGATGAACCAAACCAGTCA+AGG | + | chr6_2:500623-500642 | None:intergenic | 40.0% | |
TCATTTATCACAGGAGCTGA+TGG | + | chr6_2:500909-500928 | None:intergenic | 40.0% | |
GATTATCACGTGGTTACATC+AGG | - | chr6_2:501035-501054 | Msa0903400:intron | 40.0% | |
! | AGTGATTCTGTGGTTGATAC+TGG | - | chr6_2:501130-501149 | Msa0903400:intron | 40.0% |
! | GTGATTCTGTGGTTGATACT+GGG | - | chr6_2:501131-501150 | Msa0903400:intron | 40.0% |
TTATTTATCACCGGAGCTGA+TGG | + | chr6_2:501220-501239 | None:intergenic | 40.0% | |
ATGATGTGCGAAGACAAGAT+AGG | + | chr6_2:501393-501412 | None:intergenic | 40.0% | |
CAAGTGAGGGAAAAAAGGAT+TGG | + | chr6_2:501603-501622 | None:intergenic | 40.0% | |
CACAACAAGTGAGGGAAAAA+AGG | + | chr6_2:501608-501627 | None:intergenic | 40.0% | |
ACACAAGTCACAACAAGTGA+GGG | + | chr6_2:501616-501635 | None:intergenic | 40.0% | |
CTTCCAATTAGCATACTTCC+AGG | + | chr6_2:501724-501743 | None:intergenic | 40.0% | |
! | CTGGAAGTATGCTAATTGGA+AGG | - | chr6_2:501722-501741 | Msa0903400:intron | 40.0% |
! | GGAAGTATGCTAATTGGAAG+GGG | - | chr6_2:501724-501743 | Msa0903400:intron | 40.0% |
GGAAAGAGCAATATTGTGAC+TGG | - | chr6_2:501779-501798 | Msa0903400:intron | 40.0% | |
! | CAATATTGTGACTGGTGTTG+TGG | - | chr6_2:501787-501806 | Msa0903400:intron | 40.0% |
!! | TGGTGTTGTGGAAACAATCA+AGG | - | chr6_2:501799-501818 | Msa0903400:intron | 40.0% |
AATGTCAAAGGAAGGGCAAA+AGG | - | chr6_2:501854-501873 | Msa0903400:intron | 40.0% | |
ATGTCAAAGGAAGGGCAAAA+GGG | - | chr6_2:501855-501874 | Msa0903400:intron | 40.0% | |
!! | TGAGTTGGTTTCCATACTAG+AGG | - | chr6_2:501889-501908 | Msa0903400:intron | 40.0% |
GTCATGTGATACCTCTAGTA+TGG | + | chr6_2:501903-501922 | None:intergenic | 40.0% | |
TCATACTTGCAGGAAGAAAC+AGG | - | chr6_2:502016-502035 | Msa0903400:CDS | 40.0% | |
ATCATACTTTACAGGGGTTG+GGG | - | chr6_2:502070-502089 | Msa0903400:CDS | 40.0% | |
GAATGCAGTAACAAACAGCA+GGG | - | chr6_2:502203-502222 | Msa0903400:CDS | 40.0% | |
AATGCAGTAACAAACAGCAG+GGG | - | chr6_2:502204-502223 | Msa0903400:CDS | 40.0% | |
!!! | TTTTAAAGTTCAGGGTGTGC+AGG | + | chr6_2:502258-502277 | None:intergenic | 40.0% |
AAAGTGCAGCCAACAGAAAT+TGG | - | chr6_2:502439-502458 | Msa0903400:CDS | 40.0% | |
TGGAGAAGAAGGAGTGAAGA+AGG | + | chr6_2:492977-492996 | None:intergenic | 45.0% | |
GGGAAGAAGAATGGAGAAGA+AGG | + | chr6_2:492988-493007 | None:intergenic | 45.0% | |
!!! | GGGGTTTTGGGGAAATGAAA+AGG | + | chr6_2:493009-493028 | None:intergenic | 45.0% |
TTTATCGGCGATGCGTTGAA+TGG | + | chr6_2:493088-493107 | None:intergenic | 45.0% | |
! | AGAAGAGGAAGAGGATTGGT+CGG | + | chr6_2:493142-493161 | None:intergenic | 45.0% |
! | TTTGGGAGTGTGTGTGGTAA+TGG | + | chr6_2:493210-493229 | None:intergenic | 45.0% |
ACTAGAGGAACTGGATTCTC+CGG | + | chr6_2:493273-493292 | None:intergenic | 45.0% | |
GAGAATCCAGTTCCTCTAGT+TGG | - | chr6_2:493273-493292 | Msa0903400:three_prime_UTR | 45.0% | |
!! | GAAGAGAGTACCGACTTTAG+CGG | - | chr6_2:493374-493393 | Msa0903400:three_prime_UTR | 45.0% |
! | TGACGGATGGAGAGATATTG+AGG | - | chr6_2:493406-493425 | Msa0903400:CDS | 45.0% |
AACAATCCCTTCCGTTACAC+CGG | + | chr6_2:493481-493500 | None:intergenic | 45.0% | |
TCATGAACGTTGGCGAAGAT+CGG | - | chr6_2:493509-493528 | Msa0903400:CDS | 45.0% | |
GCGAAGATCGGAAGTTGTTA+GGG | - | chr6_2:493521-493540 | Msa0903400:CDS | 45.0% | |
! | GCTACCGTGGAAATGAGTTT+TGG | - | chr6_2:494493-494512 | Msa0903400:intron | 45.0% |
!! | TCCCATAGGTGTTGCTTACA+AGG | + | chr6_2:494671-494690 | None:intergenic | 45.0% |
ACCTATGGGAGATGCTCTTA+TGG | - | chr6_2:494681-494700 | Msa0903400:CDS | 45.0% | |
CCTATGGGAGATGCTCTTAT+GGG | - | chr6_2:494682-494701 | Msa0903400:CDS | 45.0% | |
!! | GTTGGAGGTGTCAAGTTGAT+AGG | - | chr6_2:494761-494780 | Msa0903400:CDS | 45.0% |
!! | GGACTTGTTGTTTGGAGATC+TGG | - | chr6_2:495125-495144 | Msa0903400:intron | 45.0% |
TGAACTTTGTCCAGCATGTG+TGG | + | chr6_2:495306-495325 | None:intergenic | 45.0% | |
AGAGTGAGATTTCAACTGCC+AGG | - | chr6_2:495377-495396 | Msa0903400:intron | 45.0% | |
TCTAAAAGCTCTGCTTCACC+TGG | + | chr6_2:495398-495417 | None:intergenic | 45.0% | |
!! | ACAGCTTGTTAGAGGGTCTT+GGG | - | chr6_2:495426-495445 | Msa0903400:intron | 45.0% |
GGTAGAAGATCAGCATCAAC+AGG | + | chr6_2:495488-495507 | None:intergenic | 45.0% | |
CTAAATCCAGGAATAACGGC+AGG | + | chr6_2:495509-495528 | None:intergenic | 45.0% | |
CTGCCGTTATTCCTGGATTT+AGG | - | chr6_2:495507-495526 | Msa0903400:intron | 45.0% | |
CGGCCTAAATCCAGGAATAA+CGG | + | chr6_2:495513-495532 | None:intergenic | 45.0% | |
TATGGAAGTAGGCGAAAAGG+CGG | + | chr6_2:495533-495552 | None:intergenic | 45.0% | |
CCATATGGAAGTAGGCGAAA+AGG | + | chr6_2:495536-495555 | None:intergenic | 45.0% | |
! | CCTTTTCGCCTACTTCCATA+TGG | - | chr6_2:495533-495552 | Msa0903400:intron | 45.0% |
ACTGCACACCATATGGAAGT+AGG | + | chr6_2:495544-495563 | None:intergenic | 45.0% | |
AGCTTAGACTGCACACCATA+TGG | + | chr6_2:495551-495570 | None:intergenic | 45.0% | |
TGGTGTGCAGTCTAAGCTAA+CGG | - | chr6_2:495553-495572 | Msa0903400:intron | 45.0% | |
TCTGCCAAGTCTCTTCAATG+TGG | + | chr6_2:495591-495610 | None:intergenic | 45.0% | |
TGACCCAATGCAAAATGGCA+TGG | + | chr6_2:495620-495639 | None:intergenic | 45.0% | |
ATGCACCCTTGACCCATATT+TGG | + | chr6_2:495667-495686 | None:intergenic | 45.0% | |
TGGCTGAAGAGATTAAGGTC+AGG | - | chr6_2:496056-496075 | Msa0903400:intron | 45.0% | |
! | AAGCCTGTACCTGCTCTTTT+TGG | - | chr6_2:496166-496185 | Msa0903400:CDS | 45.0% |
ACACCAAAAAGAGCAGGTAC+AGG | + | chr6_2:496172-496191 | None:intergenic | 45.0% | |
!! | CCATCATTTTGGGTGACAAG+AGG | + | chr6_2:496416-496435 | None:intergenic | 45.0% |
CCTCTTGTCACCCAAAATGA+TGG | - | chr6_2:496413-496432 | Msa0903400:intron | 45.0% | |
CTTCACCCATAATAGGTCAC+AGG | + | chr6_2:496555-496574 | None:intergenic | 45.0% | |
!! | TCGATAGTGTTGACCTGTAG+AGG | - | chr6_2:496667-496686 | Msa0903400:intron | 45.0% |
!! | TAGTGTTGACCTGTAGAGGA+TGG | - | chr6_2:496671-496690 | Msa0903400:intron | 45.0% |
AGTCAGATACTGCAGAGAAG+TGG | + | chr6_2:497001-497020 | None:intergenic | 45.0% | |
ACTTCTCTGCAGTATCTGAC+TGG | - | chr6_2:497000-497019 | Msa0903400:intron | 45.0% | |
ATTGCTGAAGAAACTGCAGC+AGG | + | chr6_2:497087-497106 | None:intergenic | 45.0% | |
GACTAGCATCAAATTGGCAC+AGG | - | chr6_2:497266-497285 | Msa0903400:intron | 45.0% | |
ATGAAGCCCTTCTTGTTGCT+AGG | - | chr6_2:497504-497523 | Msa0903400:intron | 45.0% | |
! | GAAGACGAGGGGTTTTTGAT+GGG | - | chr6_2:497672-497691 | Msa0903400:CDS | 45.0% |
ACCTTAGAGACAGAAAGTGG+TGG | - | chr6_2:497791-497810 | Msa0903400:CDS | 45.0% | |
TCCACCACTTTCTGTCTCTA+AGG | + | chr6_2:497795-497814 | None:intergenic | 45.0% | |
!! | GGGAGAGAGTATTCTTTGCA+TGG | - | chr6_2:498068-498087 | Msa0903400:intron | 45.0% |
CCACTTAATGGGATAAGGCT+TGG | + | chr6_2:498415-498434 | None:intergenic | 45.0% | |
! | CCAAGCCTTATCCCATTAAG+TGG | - | chr6_2:498412-498431 | Msa0903400:CDS | 45.0% |
!! | TCTGATAGAGGGTGTTCCAA+CGG | + | chr6_2:498726-498745 | None:intergenic | 45.0% |
GACCAGAGTGATCTGATAGA+GGG | + | chr6_2:498737-498756 | None:intergenic | 45.0% | |
TGACCAGAGTGATCTGATAG+AGG | + | chr6_2:498738-498757 | None:intergenic | 45.0% | |
CCCATACAAAACCGTCTGTA+AGG | + | chr6_2:498860-498879 | None:intergenic | 45.0% | |
TCAACGCCTGCAAGATTGAA+AGG | + | chr6_2:499247-499266 | None:intergenic | 45.0% | |
TTTGGCAAATCAGGCCAAAG+AGG | - | chr6_2:499531-499550 | Msa0903400:intron | 45.0% | |
AATCAGGCCAAAGAGGATGA+AGG | - | chr6_2:499538-499557 | Msa0903400:CDS | 45.0% | |
TTGGTCAAAAAAGGCCGCTA+AGG | - | chr6_2:499751-499770 | Msa0903400:intron | 45.0% | |
TGGTCAAAAAAGGCCGCTAA+GGG | - | chr6_2:499752-499771 | Msa0903400:intron | 45.0% | |
ACTTCTTAGCAAGTGCCCTT+AGG | - | chr6_2:499892-499911 | Msa0903400:intron | 45.0% | |
CTTCTTAGCAAGTGCCCTTA+GGG | - | chr6_2:499893-499912 | Msa0903400:intron | 45.0% | |
! | GCCCCAATGCCTTTTACAAA+AGG | + | chr6_2:499941-499960 | None:intergenic | 45.0% |
TGCACATCTCACCTTTCCAA+AGG | + | chr6_2:500098-500117 | None:intergenic | 45.0% | |
AAAGAGCAAGTGATGCAGAC+TGG | + | chr6_2:500147-500166 | None:intergenic | 45.0% | |
GTGTCAACAGAAGCTTCTTC+TGG | + | chr6_2:500529-500548 | None:intergenic | 45.0% | |
ACCTATACAAGAGCAGCACA+TGG | - | chr6_2:500555-500574 | Msa0903400:intron | 45.0% | |
! | TCCATGTGCTGCTCTTGTAT+AGG | + | chr6_2:500559-500578 | None:intergenic | 45.0% |
! | ACCAGAATCCTTGACTGGTT+TGG | - | chr6_2:500612-500631 | Msa0903400:intron | 45.0% |
ACCAAACCAGTCAAGGATTC+TGG | + | chr6_2:500616-500635 | None:intergenic | 45.0% | |
! | TTTGTGGTTGATACTGGGCA+CGG | - | chr6_2:500825-500844 | Msa0903400:intron | 45.0% |
CTGATGGTTCCAGATCACAT+TGG | + | chr6_2:500893-500912 | None:intergenic | 45.0% | |
! | GATGTGCTTGCCTGTCTTTT+TGG | + | chr6_2:500966-500985 | None:intergenic | 45.0% |
TTGACGTCTATCCTCTTCTG+TGG | - | chr6_2:501013-501032 | Msa0903400:intron | 45.0% | |
CACGTGATAATCCACAGAAG+AGG | + | chr6_2:501027-501046 | None:intergenic | 45.0% | |
! | CTCTTCTGTGGATTATCACG+TGG | - | chr6_2:501025-501044 | Msa0903400:intron | 45.0% |
GGATGAAGTGAGTGATTCTG+TGG | - | chr6_2:501120-501139 | Msa0903400:intron | 45.0% | |
GAGACTTCTTCTTCGAAAGC+AGG | - | chr6_2:501288-501307 | Msa0903400:intron | 45.0% | |
TTCTTCGAAAGCAGGCCTTA+AGG | - | chr6_2:501296-501315 | Msa0903400:intron | 45.0% | |
AAGCAACCTATCGTTCCCAT+AGG | - | chr6_2:501325-501344 | Msa0903400:intron | 45.0% | |
CACACAAGTCACAACAAGTG+AGG | + | chr6_2:501617-501636 | None:intergenic | 45.0% | |
GGAAACCAACTCATGAACTG+AGG | + | chr6_2:501882-501901 | None:intergenic | 45.0% | |
TCATACTTTACAGGGGTTGG+GGG | - | chr6_2:502071-502090 | Msa0903400:CDS | 45.0% | |
AGGAGAGTAGCTAAATACGG+AGG | - | chr6_2:502127-502146 | Msa0903400:CDS | 45.0% | |
TCTGATAGCTTCCAACAGCT+CGG | + | chr6_2:502173-502192 | None:intergenic | 45.0% | |
GGAATGCAGTAACAAACAGC+AGG | - | chr6_2:502202-502221 | Msa0903400:CDS | 45.0% | |
CTCTTTGGTCAATTGGGTCA+GGG | + | chr6_2:502342-502361 | None:intergenic | 45.0% | |
TCTCTTTGGTCAATTGGGTC+AGG | + | chr6_2:502343-502362 | None:intergenic | 45.0% | |
ATTGGAGTGGCGGTAGATTT+AGG | - | chr6_2:502457-502476 | Msa0903400:CDS | 45.0% | |
TTGGAGTGGCGGTAGATTTA+GGG | - | chr6_2:502458-502477 | Msa0903400:CDS | 45.0% | |
GGTGTGGGAATTAGAAGAGG+AGG | + | chr6_2:493052-493071 | None:intergenic | 50.0% | |
! | GAGGGTGTGGGAATTAGAAG+AGG | + | chr6_2:493055-493074 | None:intergenic | 50.0% |
! | TTGAATGGCGGAATCAGGGA+GGG | + | chr6_2:493073-493092 | None:intergenic | 50.0% |
! | TGCGTTGAATGGCGGAATCA+GGG | + | chr6_2:493077-493096 | None:intergenic | 50.0% |
! | ATGCGTTGAATGGCGGAATC+AGG | + | chr6_2:493078-493097 | None:intergenic | 50.0% |
GCCGATAAACTCCATTCCCT+CGG | - | chr6_2:493099-493118 | Msa0903400:three_prime_UTR | 50.0% | |
GCCGAGGGAATGGAGTTTAT+CGG | + | chr6_2:493103-493122 | None:intergenic | 50.0% | |
GGAGGAAGAAGAAGAGGAAG+AGG | + | chr6_2:493151-493170 | None:intergenic | 50.0% | |
GGTTGTGGAGGAAGAAGAAG+AGG | + | chr6_2:493157-493176 | None:intergenic | 50.0% | |
TGGAAGGAAGATTTCACCGG+CGG | + | chr6_2:493190-493209 | None:intergenic | 50.0% | |
!! | GGAGTGTGTGTGGTAATGGA+AGG | + | chr6_2:493206-493225 | None:intergenic | 50.0% |
! | TGAAGTTGAGAGAGCGCGAT+TGG | - | chr6_2:493323-493342 | Msa0903400:three_prime_UTR | 50.0% |
AGAAGGAGAGGAAGGAGAAG+AGG | - | chr6_2:493352-493371 | Msa0903400:three_prime_UTR | 50.0% | |
GCGGAATTGAGTTTGACGGA+TGG | - | chr6_2:493393-493412 | Msa0903400:exon | 50.0% | |
GGTTGGAAAAGCCGGTGTAA+CGG | - | chr6_2:493467-493486 | Msa0903400:CDS | 50.0% | |
! | GAAAAGCCGGTGTAACGGAA+GGG | - | chr6_2:493472-493491 | Msa0903400:CDS | 50.0% |
GGCGAAGATCGGAAGTTGTT+AGG | - | chr6_2:493520-493539 | Msa0903400:CDS | 50.0% | |
CGGTGTCTACGTATCACTGT+TGG | + | chr6_2:494187-494206 | None:intergenic | 50.0% | |
!! | GGTGCTACTGCTACATACTG+AGG | - | chr6_2:494293-494312 | Msa0903400:CDS | 50.0% |
!! | CCCATAAGAGCATCTCCCAT+AGG | + | chr6_2:494685-494704 | None:intergenic | 50.0% |
ATGAGTTCAGCCACACATGC+TGG | - | chr6_2:495293-495312 | Msa0903400:intron | 50.0% | |
! | CCAGCTTTGGTACAAGGAGT+CGG | - | chr6_2:495344-495363 | Msa0903400:intron | 50.0% |
!! | GACAGCTTGTTAGAGGGTCT+TGG | - | chr6_2:495425-495444 | Msa0903400:intron | 50.0% |
TTGGGCCTCGATTTACGGAT+TGG | - | chr6_2:495444-495463 | Msa0903400:intron | 50.0% | |
!! | GCCTCGATTTACGGATTGGT+GGG | - | chr6_2:495448-495467 | Msa0903400:intron | 50.0% |
!! | CCTCGATTTACGGATTGGTG+GGG | - | chr6_2:495449-495468 | Msa0903400:intron | 50.0% |
!! | CTCGATTTACGGATTGGTGG+GGG | - | chr6_2:495450-495469 | Msa0903400:intron | 50.0% |
GATCAGCATCAACAGGCACA+GGG | + | chr6_2:495481-495500 | None:intergenic | 50.0% | |
AGATCAGCATCAACAGGCAC+AGG | + | chr6_2:495482-495501 | None:intergenic | 50.0% | |
CTTCTACCTGCCGTTATTCC+TGG | - | chr6_2:495500-495519 | Msa0903400:intron | 50.0% | |
!! | AAAAGTATCACCACCGCTCG+AGG | + | chr6_2:496589-496608 | None:intergenic | 50.0% |
TGCTCAACACCATCCTCTAC+AGG | + | chr6_2:496683-496702 | None:intergenic | 50.0% | |
! | AGAGGATGGTGTTGAGCAGT+AGG | - | chr6_2:496685-496704 | Msa0903400:intron | 50.0% |
TGATCTGGCACAACTGTTCG+AGG | - | chr6_2:496809-496828 | Msa0903400:intron | 50.0% | |
GATCTGGCACAACTGTTCGA+GGG | - | chr6_2:496810-496829 | Msa0903400:intron | 50.0% | |
GAGGGAAGCTAGTCAAACAC+TGG | - | chr6_2:496828-496847 | Msa0903400:intron | 50.0% | |
TCTCTGCAGTATCTGACTGG+AGG | - | chr6_2:497003-497022 | Msa0903400:intron | 50.0% | |
CTGGAGGAACTCTCCTTTCT+CGG | - | chr6_2:497019-497038 | Msa0903400:intron | 50.0% | |
! | GGAAGACGAGGGGTTTTTGA+TGG | - | chr6_2:497671-497690 | Msa0903400:CDS | 50.0% |
! | AGGGGTTTTTGATGGGACAG+TGG | - | chr6_2:497679-497698 | Msa0903400:CDS | 50.0% |
AATATGCCCACCAGACAGCT+CGG | - | chr6_2:497768-497787 | Msa0903400:CDS | 50.0% | |
CGGACCTTAGAGACAGAAAG+TGG | - | chr6_2:497788-497807 | Msa0903400:CDS | 50.0% | |
! | AGCAGTAGAGAGAGTGCACA+AGG | - | chr6_2:497823-497842 | Msa0903400:CDS | 50.0% |
! | GCAGTAGAGAGAGTGCACAA+GGG | - | chr6_2:497824-497843 | Msa0903400:CDS | 50.0% |
CACCCTCTATCAGATCACTC+TGG | - | chr6_2:498732-498751 | Msa0903400:intron | 50.0% | |
GACAGTCGTCACCTTACAGA+CGG | - | chr6_2:498846-498865 | Msa0903400:intron | 50.0% | |
! | AGGGAAGTGCAAGTTCCCTT+TGG | + | chr6_2:499679-499698 | None:intergenic | 50.0% |
GGGAACTTGCACTTCCCTTT+AGG | - | chr6_2:499681-499700 | Msa0903400:intron | 50.0% | |
!! | GCCGCTAAGGGAACTTGTTA+AGG | - | chr6_2:499764-499783 | Msa0903400:intron | 50.0% |
AACAAGTGCCCTTGCCCTAA+GGG | + | chr6_2:499910-499929 | None:intergenic | 50.0% | |
TAACAAGTGCCCTTGCCCTA+AGG | + | chr6_2:499911-499930 | None:intergenic | 50.0% | |
!! | GTAAAAGGCATTGGGGCCTT+TGG | - | chr6_2:499944-499963 | Msa0903400:intron | 50.0% |
GCTGACTGTAGCATGTTGCT+AGG | - | chr6_2:500228-500247 | Msa0903400:CDS | 50.0% | |
CACATGGAGCTGATTGGTAG+TGG | - | chr6_2:500571-500590 | Msa0903400:intron | 50.0% | |
!! | ATGGAGCTGATTGGTAGTGG+TGG | - | chr6_2:500574-500593 | Msa0903400:intron | 50.0% |
! | GGTAGTGGTGGAGAATGTCA+AGG | - | chr6_2:500586-500605 | Msa0903400:intron | 50.0% |
GGTGAACCAGAATCCTTGAC+TGG | - | chr6_2:500607-500626 | Msa0903400:intron | 50.0% | |
AGGGACCTCAGTTCATGAGT+TGG | - | chr6_2:501874-501893 | Msa0903400:intron | 50.0% | |
! | AGGTGCAGTTCTAGTCTCTC+AGG | - | chr6_2:502036-502055 | Msa0903400:CDS | 50.0% |
CATACTTTACAGGGGTTGGG+GGG | - | chr6_2:502072-502091 | Msa0903400:CDS | 50.0% | |
AACAGCTCGGGAGAGACATT+GGG | + | chr6_2:502160-502179 | None:intergenic | 50.0% | |
CTGATAGCTTCCAACAGCTC+GGG | + | chr6_2:502172-502191 | None:intergenic | 50.0% | |
GCGGAGCTATGTTGATGTGA+GGG | - | chr6_2:502226-502245 | Msa0903400:CDS | 50.0% | |
GCAGCCAACAGAAATTGGAG+TGG | - | chr6_2:502444-502463 | Msa0903400:CDS | 50.0% | |
GCCAACAGAAATTGGAGTGG+CGG | - | chr6_2:502447-502466 | Msa0903400:CDS | 50.0% | |
ACCGCCACTCCAATTTCTGT+TGG | + | chr6_2:502451-502470 | None:intergenic | 50.0% | |
! | GTTGAATGGCGGAATCAGGG+AGG | + | chr6_2:493074-493093 | None:intergenic | 55.0% |
ATCGGCGATGCGTTGAATGG+CGG | + | chr6_2:493085-493104 | None:intergenic | 55.0% | |
!! | AGAGGAAGAGGATTGGTCGG+TGG | + | chr6_2:493139-493158 | None:intergenic | 55.0% |
AAGGAAGATTTCACCGGCGG+AGG | + | chr6_2:493187-493206 | None:intergenic | 55.0% | |
!!! | CGGTGTTTTGGGAGTGTGTG+TGG | + | chr6_2:493216-493235 | None:intergenic | 55.0% |
ACACTCCCAAAACACCGCGT+CGG | - | chr6_2:493219-493238 | Msa0903400:three_prime_UTR | 55.0% | |
! | TGTGACCGACGCGGTGTTTT+GGG | + | chr6_2:493227-493246 | None:intergenic | 55.0% |
GATTGGCGAAGGAGAAGGAG+AGG | - | chr6_2:493340-493359 | Msa0903400:three_prime_UTR | 55.0% | |
! | GGAAAAGCCGGTGTAACGGA+AGG | - | chr6_2:493471-493490 | Msa0903400:CDS | 55.0% |
GACGTGTGCAGTGTCTCGTA+CGG | + | chr6_2:494258-494277 | None:intergenic | 55.0% | |
CCGACTCCTTGTACCAAAGC+TGG | + | chr6_2:495347-495366 | None:intergenic | 55.0% | |
GGGTCTTGGGCCTCGATTTA+CGG | - | chr6_2:495439-495458 | Msa0903400:intron | 55.0% | |
!! | GGCCTCGATTTACGGATTGG+TGG | - | chr6_2:495447-495466 | Msa0903400:intron | 55.0% |
CCCCACCAATCCGTAAATCG+AGG | + | chr6_2:495452-495471 | None:intergenic | 55.0% | |
CGAAAAGGCGGCCTAAATCC+AGG | + | chr6_2:495521-495540 | None:intergenic | 55.0% | |
! | GAGCAGGTACAGGCTTTGAC+AGG | + | chr6_2:496162-496181 | None:intergenic | 55.0% |
AGTTGTTGTGGCACCTCGAG+CGG | - | chr6_2:496573-496592 | Msa0903400:intron | 55.0% | |
TAAGGTCCGAGCTGTCTGGT+GGG | + | chr6_2:497777-497796 | None:intergenic | 55.0% | |
!! | TCTCTAAGGTCCGAGCTGTC+TGG | + | chr6_2:497781-497800 | None:intergenic | 55.0% |
GTTCGCGGCCTCAAACTATC+AGG | + | chr6_2:497890-497909 | None:intergenic | 55.0% | |
! | AATAGAGGCACAACGCCGTG+AGG | - | chr6_2:497943-497962 | Msa0903400:intron | 55.0% |
! | CTTGACAGCCTTGTCCACGT+TGG | - | chr6_2:498575-498594 | Msa0903400:CDS | 55.0% |
TAGCAAGTGCCCTTAGGGCA+AGG | - | chr6_2:499898-499917 | Msa0903400:intron | 55.0% | |
AGCAAGTGCCCTTAGGGCAA+GGG | - | chr6_2:499899-499918 | Msa0903400:intron | 55.0% | |
GAGCAGCACATGGAGCTGAT+TGG | - | chr6_2:500565-500584 | Msa0903400:intron | 55.0% | |
GGATCCTGAACCATCAGCTC+CGG | - | chr6_2:501207-501226 | Msa0903400:intron | 55.0% | |
ATCACCGGAGCTGATGGTTC+AGG | + | chr6_2:501214-501233 | None:intergenic | 55.0% | |
CAACAGCTCGGGAGAGACAT+TGG | + | chr6_2:502161-502180 | None:intergenic | 55.0% | |
CAATGTCTCTCCCGAGCTGT+TGG | - | chr6_2:502159-502178 | Msa0903400:CDS | 55.0% | |
GCAGTAACAAACAGCAGGGG+CGG | - | chr6_2:502207-502226 | Msa0903400:CDS | 55.0% | |
GGCGGAGCTATGTTGATGTG+AGG | - | chr6_2:502225-502244 | Msa0903400:CDS | 55.0% | |
! | TGGTGGTGATGCCGAGGGAA+TGG | + | chr6_2:493113-493132 | None:intergenic | 60.0% |
!! | AGAGGATTGGTCGGTGGTGG+TGG | + | chr6_2:493133-493152 | None:intergenic | 60.0% |
!! | GGAAGAGGATTGGTCGGTGG+TGG | + | chr6_2:493136-493155 | None:intergenic | 60.0% |
GAAGATTTCACCGGCGGAGG+TGG | + | chr6_2:493184-493203 | None:intergenic | 60.0% | |
! | GTGTGACCGACGCGGTGTTT+TGG | + | chr6_2:493228-493247 | None:intergenic | 60.0% |
GTCACACACTCGACCTCAGC+TGG | - | chr6_2:493241-493260 | Msa0903400:three_prime_UTR | 60.0% | |
CCTGCGCCAACTAGAGGAAC+TGG | + | chr6_2:493282-493301 | None:intergenic | 60.0% | |
CCAGTTCCTCTAGTTGGCGC+AGG | - | chr6_2:493279-493298 | Msa0903400:three_prime_UTR | 60.0% | |
TCGAGTCCTGCGCCAACTAG+AGG | + | chr6_2:493288-493307 | None:intergenic | 60.0% | |
! | TGAGAGAGCGCGATTGGCGA+AGG | - | chr6_2:493329-493348 | Msa0903400:three_prime_UTR | 60.0% |
AGCGCGATTGGCGAAGGAGA+AGG | - | chr6_2:493335-493354 | Msa0903400:three_prime_UTR | 60.0% | |
GGCGAAGGAGAAGGAGAGGA+AGG | - | chr6_2:493344-493363 | Msa0903400:three_prime_UTR | 60.0% | |
CTAAGGTCCGAGCTGTCTGG+TGG | + | chr6_2:497778-497797 | None:intergenic | 60.0% | |
ACTTTACAGGGGTTGGGGGG+CGG | - | chr6_2:502075-502094 | Msa0903400:CDS | 60.0% | |
! | GGCGGAATCAGGGAGGGTGT+GGG | + | chr6_2:493067-493086 | None:intergenic | 65.0% |
TGGCGGAATCAGGGAGGGTG+TGG | + | chr6_2:493068-493087 | None:intergenic | 65.0% | |
!! | GGTGGTGGTGGTGATGCCGA+GGG | + | chr6_2:493118-493137 | None:intergenic | 65.0% |
!! | TGGTGGTGGTGGTGATGCCG+AGG | + | chr6_2:493119-493138 | None:intergenic | 65.0% |
!! | GGATTGGTCGGTGGTGGTGG+TGG | + | chr6_2:493130-493149 | None:intergenic | 65.0% |
!! | GGAGGTGGTGGAGGTTGTGG+AGG | + | chr6_2:493169-493188 | None:intergenic | 65.0% |
ACAACCTCCACCACCTCCGC+CGG | - | chr6_2:493171-493190 | Msa0903400:three_prime_UTR | 65.0% | |
GATTTCACCGGCGGAGGTGG+TGG | + | chr6_2:493181-493200 | None:intergenic | 65.0% | |
GGTCGAGTGTGTGACCGACG+CGG | + | chr6_2:493236-493255 | None:intergenic | 65.0% | |
CGACCTCAGCTGGAGCACAC+CGG | - | chr6_2:493251-493270 | Msa0903400:three_prime_UTR | 65.0% | |
TCTCCGGTGTGCTCCAGCTG+AGG | + | chr6_2:493257-493276 | None:intergenic | 65.0% | |
TGTTGTGGCACCTCGAGCGG+TGG | - | chr6_2:496576-496595 | Msa0903400:intron | 65.0% | |
CTTTACAGGGGTTGGGGGGC+GGG | - | chr6_2:502076-502095 | Msa0903400:CDS | 65.0% | |
!! | GGCGGAGGTGGTGGAGGTTG+TGG | + | chr6_2:493172-493191 | None:intergenic | 70.0% |
! | TTCACCGGCGGAGGTGGTGG+AGG | + | chr6_2:493178-493197 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_2 | gene | 492914 | 502696 | 492914 | ID=Msa0903400;Name=Msa0903400 |
chr6_2 | mRNA | 492914 | 502696 | 492914 | ID=Msa0903400-mRNA-1;Parent=Msa0903400;Name=Msa0903400-mRNA-1;_AED=0.10;_eAED=0.10;_QI=32|1|1|1|1|1|13|483|1000 |
chr6_2 | exon | 492914 | 493582 | 492914 | ID=Msa0903400-mRNA-1:exon:284;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 493700 | 493830 | 493700 | ID=Msa0903400-mRNA-1:exon:283;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 494264 | 494492 | 494264 | ID=Msa0903400-mRNA-1:exon:282;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 494636 | 494803 | 494636 | ID=Msa0903400-mRNA-1:exon:281;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 494959 | 495099 | 494959 | ID=Msa0903400-mRNA-1:exon:280;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 496153 | 496206 | 496153 | ID=Msa0903400-mRNA-1:exon:279;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 496291 | 496350 | 496291 | ID=Msa0903400-mRNA-1:exon:278;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 497646 | 497938 | 497646 | ID=Msa0903400-mRNA-1:exon:277;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 498085 | 498241 | 498085 | ID=Msa0903400-mRNA-1:exon:276;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 498323 | 498598 | 498323 | ID=Msa0903400-mRNA-1:exon:275;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 499538 | 499668 | 499538 | ID=Msa0903400-mRNA-1:exon:274;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 499975 | 500497 | 499975 | ID=Msa0903400-mRNA-1:exon:273;Parent=Msa0903400-mRNA-1 |
chr6_2 | exon | 502011 | 502696 | 502011 | ID=Msa0903400-mRNA-1:exon:272;Parent=Msa0903400-mRNA-1 |
chr6_2 | five_prime_UTR | 502665 | 502696 | 502665 | ID=Msa0903400-mRNA-1:five_prime_utr;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 502011 | 502664 | 502011 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 499975 | 500497 | 499975 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 499538 | 499668 | 499538 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 498323 | 498598 | 498323 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 498085 | 498241 | 498085 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 497646 | 497938 | 497646 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 496291 | 496350 | 496291 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 496153 | 496206 | 496153 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 494959 | 495099 | 494959 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 494636 | 494803 | 494636 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 494264 | 494492 | 494264 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 493700 | 493830 | 493700 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | CDS | 493397 | 493582 | 493397 | ID=Msa0903400-mRNA-1:cds;Parent=Msa0903400-mRNA-1 |
chr6_2 | three_prime_UTR | 492914 | 493396 | 492914 | ID=Msa0903400-mRNA-1:three_prime_utr;Parent=Msa0903400-mRNA-1 |
Gene Sequence |
Protein sequence |