Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974870 | XP_003594033.1 | 86.134 | 714 | 80 | 2 | 1 | 695 | 1 | 714 | 0.0 | 1258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974870 | sp|O78328|DXS_CAPAN | 73.296 | 719 | 167 | 4 | 1 | 695 | 1 | 718 | 0.0 | 1048 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974870 | G7IFK9 | 86.134 | 714 | 80 | 2 | 1 | 695 | 1 | 714 | 0.0 | 1258 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa0974870 | 0.806393 | 8.407236e-50 | -8.615850e-47 |
| Msa0092630 | Msa0974870 | 0.974405 | 4.246619e-138 | -8.615850e-47 |
| Msa0102070 | Msa0974870 | 0.806304 | 8.778856e-50 | -8.615850e-47 |
| Msa0604350 | Msa0974870 | 0.814770 | 1.300520e-51 | -8.615850e-47 |
| Msa0636170 | Msa0974870 | 0.816775 | 4.647045e-52 | -8.615850e-47 |
| Msa0726140 | Msa0974870 | 0.802991 | 4.313407e-49 | -8.615850e-47 |
| Msa0729800 | Msa0974870 | 0.817238 | 3.658525e-52 | -8.615850e-47 |
| Msa0733290 | Msa0974870 | 0.802368 | 5.799124e-49 | -8.615850e-47 |
| Msa0743810 | Msa0974870 | 0.830597 | 2.684458e-55 | -8.615850e-47 |
| Msa0745060 | Msa0974870 | 0.811758 | 5.964941e-51 | -8.615850e-47 |
| Msa0783160 | Msa0974870 | 0.828383 | 9.269157e-55 | -8.615850e-47 |
| Msa0825860 | Msa0974870 | 0.818637 | 1.766621e-52 | -8.615850e-47 |
| Msa0227480 | Msa0974870 | 0.808862 | 2.514128e-50 | -8.615850e-47 |
| Msa0232850 | Msa0974870 | 0.809899 | 1.506082e-50 | -8.615850e-47 |
| Msa0414420 | Msa0974870 | 0.834935 | 2.248202e-56 | -8.615850e-47 |
| Msa0445780 | Msa0974870 | 0.906130 | 2.060382e-80 | -8.615850e-47 |
| Msa0450000 | Msa0974870 | 0.836148 | 1.108730e-56 | -8.615850e-47 |
| Msa0452900 | Msa0974870 | 0.838709 | 2.448366e-57 | -8.615850e-47 |
| Msa0267000 | Msa0974870 | 0.805232 | 1.474091e-49 | -8.615850e-47 |
| Msa0267010 | Msa0974870 | 0.811297 | 7.511646e-51 | -8.615850e-47 |
| Msa0342240 | Msa0974870 | 0.828465 | 8.855420e-55 | -8.615850e-47 |
| Msa0534540 | Msa0974870 | 0.808311 | 3.295773e-50 | -8.615850e-47 |
| Msa0564890 | Msa0974870 | 0.805519 | 1.283837e-49 | -8.615850e-47 |
| Msa0846330 | Msa0974870 | 0.828936 | 6.813485e-55 | -8.615850e-47 |
| Msa0846350 | Msa0974870 | 0.811991 | 5.308345e-51 | -8.615850e-47 |
| Msa0872230 | Msa0974870 | 0.914071 | 2.946911e-84 | -8.615850e-47 |
| Msa0888370 | Msa0974870 | 0.813803 | 2.126939e-51 | -8.615850e-47 |
| Msa0974870 | Msa0981270 | 0.969059 | 1.434677e-129 | -8.615850e-47 |
| Msa0974870 | Msa0989060 | 0.803905 | 2.788671e-49 | -8.615850e-47 |
| Msa0974870 | Msa1016280 | 0.824390 | 8.283794e-54 | -8.615850e-47 |
| Msa0974870 | Msa1025360 | 0.821432 | 4.050404e-53 | -8.615850e-47 |
| Msa0974870 | Msa1025370 | 0.803171 | 3.959987e-49 | -8.615850e-47 |
| Msa0974870 | Msa1044830 | 0.809373 | 1.954302e-50 | -8.615850e-47 |
| Msa0974870 | Msa1044840 | 0.820459 | 6.783946e-53 | -8.615850e-47 |
| Msa0974870 | Msa1060840 | 0.821073 | 4.902189e-53 | -8.615850e-47 |
| Msa0974870 | Msa1092990 | 0.827781 | 1.294206e-54 | -8.615850e-47 |
| Msa0974870 | Msa1100980 | 0.807013 | 6.220520e-50 | -8.615850e-47 |
| Msa0974870 | Msa1109440 | 0.814519 | 1.478057e-51 | -8.615850e-47 |
| Msa0974870 | Msa1146110 | 0.804485 | 2.112308e-49 | -8.615850e-47 |
| Msa0974870 | Msa1149360 | 0.815640 | 8.335463e-52 | -8.615850e-47 |
| Msa0974870 | Msa1150370 | 0.800983 | 1.115497e-48 | -8.615850e-47 |
| Msa0974870 | Msa1187940 | 0.812950 | 3.275958e-51 | -8.615850e-47 |
| Msa0974870 | Msa1192640 | 0.810291 | 1.240228e-50 | -8.615850e-47 |
| Msa0974870 | Msa1269670 | 0.809496 | 1.838702e-50 | -8.615850e-47 |
| Msa0974870 | Msa1270230 | 0.822918 | 1.831672e-53 | -8.615850e-47 |
| Msa0974870 | Msa1270270 | 0.801843 | 7.437470e-49 | -8.615850e-47 |
| Msa0974870 | Msa1283330 | 0.812828 | 3.484099e-51 | -8.615850e-47 |
| Msa0974870 | Msa1285930 | 0.831192 | 1.918729e-55 | -8.615850e-47 |
| Msa0974870 | Msa1287800 | 0.822879 | 1.869949e-53 | -8.615850e-47 |
| Msa0974870 | Msa1287810 | 0.834391 | 3.079082e-56 | -8.615850e-47 |
| Msa0974870 | Msa1289430 | 0.802416 | 5.667983e-49 | -8.615850e-47 |
| Msa0974870 | Msa1340590 | 0.813904 | 2.021236e-51 | -8.615850e-47 |
| Msa0974870 | Msa1397150 | 0.974494 | 2.962083e-138 | -8.615850e-47 |
| Msa0974870 | Msa1397580 | 0.812172 | 4.844884e-51 | -8.615850e-47 |
| Msa0974870 | Msa1404000 | 0.803957 | 2.720306e-49 | -8.615850e-47 |
| Msa0974870 | Msa1422180 | 0.803218 | 3.872356e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974870 | MtrunA17_Chr2g0286641 | 86.134 | 714 | 80 | 2 | 1 | 695 | 1 | 714 | 0.0 | 1258 |
| Msa0974870 | MtrunA17_Chr4g0066611 | 75.178 | 701 | 148 | 3 | 21 | 695 | 16 | 716 | 0.0 | 1060 |
| Msa0974870 | MtrunA17_Chr8g0367181 | 64.723 | 686 | 205 | 3 | 44 | 692 | 23 | 708 | 0.0 | 892 |
| Msa0974870 | MtrunA17_Chr8g0367201 | 66.461 | 647 | 195 | 1 | 68 | 692 | 62 | 708 | 0.0 | 887 |
| Msa0974870 | MtrunA17_Chr3g0138171 | 55.675 | 652 | 261 | 5 | 67 | 695 | 60 | 706 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974870 | AT4G15560.1 | 73.810 | 672 | 153 | 2 | 44 | 692 | 45 | 716 | 0.0 | 1018 |
| Msa0974870 | AT3G21500.3 | 75.118 | 635 | 147 | 3 | 59 | 692 | 50 | 674 | 0.0 | 987 |
| Msa0974870 | AT3G21500.2 | 76.102 | 590 | 130 | 3 | 59 | 647 | 50 | 629 | 0.0 | 927 |
| Msa0974870 | AT3G21500.1 | 75.932 | 590 | 130 | 4 | 59 | 647 | 50 | 628 | 0.0 | 920 |
| Msa0974870 | AT5G11380.1 | 51.511 | 662 | 272 | 9 | 56 | 692 | 59 | 696 | 0.0 | 653 |
| Msa0974870 | AT5G11380.3 | 47.901 | 524 | 224 | 9 | 56 | 554 | 59 | 558 | 2.37e-158 | 469 |
| Msa0974870 | AT5G11380.2 | 48.907 | 503 | 211 | 7 | 56 | 534 | 59 | 539 | 1.03e-157 | 468 |
| Msa0974870 | AT5G11380.4 | 48.290 | 497 | 211 | 7 | 56 | 528 | 59 | 533 | 7.16e-152 | 453 |
Find 184 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATGTTGTCACTGAAAA+AGG | 0.249215 | 6_4:-8267082 | Msa0974870:CDS |
| TTCTCATGTTGCTCAGTTCA+TGG | 0.260981 | 6_4:-8265235 | Msa0974870:CDS |
| GAGAGTGAATTTGATAGTTT+TGG | 0.274045 | 6_4:-8268796 | Msa0974870:CDS |
| GAAGAAACCTACACCCCTTT+TGG | 0.281281 | 6_4:-8269704 | Msa0974870:CDS |
| AGGCGAAAGAGTGGCCCTTT+TGG | 0.287344 | 6_4:-8265439 | Msa0974870:CDS |
| TATGGCATGTCTACCTAATA+TGG | 0.308128 | 6_4:-8265887 | Msa0974870:CDS |
| TATGAAGACTCTAACGATTA+AGG | 0.310044 | 6_4:-8269659 | Msa0974870:intron |
| GGAGCCATCACCACCATATT+AGG | 0.321626 | 6_4:+8265874 | None:intergenic |
| CATGGCATGATTGGTGGTTC+TGG | 0.323646 | 6_4:-8267226 | Msa0974870:CDS |
| GCCCTTGATGGTCTTCTTGA+TGG | 0.325921 | 6_4:-8265213 | Msa0974870:CDS |
| GCTCAGTTCATGGCCCTTGA+TGG | 0.326804 | 6_4:-8265225 | Msa0974870:CDS |
| GAAGGATCAATAGGAGGATT+TGG | 0.330255 | 6_4:-8265258 | Msa0974870:CDS |
| AAACCTAACCTGGTTGAGTC+TGG | 0.337829 | 6_4:+8269992 | None:intergenic |
| CCATGGTCGATATAAATATC+TGG | 0.342613 | 6_4:+8264833 | None:intergenic |
| CAAAATTCTTGGACAAAGAA+AGG | 0.345530 | 6_4:-8264747 | Msa0974870:CDS |
| CGTTAGAGTCTTCATATCTT+CGG | 0.357380 | 6_4:+8269666 | None:intergenic |
| TTGTCGATAACAAATCTTAC+TGG | 0.362049 | 6_4:+8265967 | None:intergenic |
| ATCCAGAGTGTTTCTCAAAC+TGG | 0.373688 | 6_4:-8269130 | Msa0974870:CDS |
| TGGTGGTTCTAACTATCAAT+GGG | 0.383908 | 6_4:-8270039 | Msa0974870:CDS |
| GACTACATTGGTCCTGTTGA+TGG | 0.387476 | 6_4:-8267175 | Msa0974870:CDS |
| ATAAAATTCTCACTGGTAGA+AGG | 0.387884 | 6_4:-8268876 | Msa0974870:CDS |
| TTCCATTTGCCCGTGGAAAT+CGG | 0.388002 | 6_4:+8265782 | None:intergenic |
| GACGAGTAAATTGCACAAAA+AGG | 0.388561 | 6_4:+8266582 | None:intergenic |
| GCTGGATTTGTTGGAGAAGA+TGG | 0.397017 | 6_4:-8265943 | Msa0974870:CDS |
| GTTAAGAGTCCTAAGAAAAC+TGG | 0.398320 | 6_4:-8267115 | Msa0974870:CDS |
| AAGGGCCACTCTTTCGCCTT+CGG | 0.398795 | 6_4:+8265443 | None:intergenic |
| GCTGCAATGGGAGGTGGAAC+CGG | 0.400403 | 6_4:-8266711 | Msa0974870:CDS |
| GACTGCAGGGCAGGCATTTG+AGG | 0.403656 | 6_4:-8268049 | Msa0974870:CDS |
| GCTGAGCAATTAGCTGTTGC+TGG | 0.407903 | 6_4:-8264803 | Msa0974870:CDS |
| ACTCTTAACTTGTTTGAGAA+TGG | 0.410412 | 6_4:+8267129 | None:intergenic |
| ATCGACAAAGCTGGATTTGT+TGG | 0.413314 | 6_4:-8265952 | Msa0974870:CDS |
| CTTCGAGATGTTTCGATGTA+GGG | 0.413316 | 6_4:-8266662 | Msa0974870:CDS |
| CTACCTACCGCGGACCTTCA+TGG | 0.415412 | 6_4:-8267958 | Msa0974870:CDS |
| AGAGCACCAACTGGTGGTAT+TGG | 0.417530 | 6_4:+8267934 | None:intergenic |
| AAAACTGTTGCTGCTATTTG+AGG | 0.418915 | 6_4:+8264770 | None:intergenic |
| CTGCTGTCCCAAAGCCCAAA+AGG | 0.419334 | 6_4:+8265424 | None:intergenic |
| TTGGTGGTTCTAACTATCAA+TGG | 0.424273 | 6_4:-8270040 | Msa0974870:CDS |
| ACAGCTAGGTCGATCGTTAA+TGG | 0.425372 | 6_4:+8265807 | None:intergenic |
| GTGAATATTGCTAAGGTTGA+TGG | 0.425949 | 6_4:-8267256 | Msa0974870:intron |
| GTTAGAGTCTTCATATCTTC+GGG | 0.428007 | 6_4:+8269667 | None:intergenic |
| GCTAAGTTTGATCCTGCAAC+TGG | 0.431828 | 6_4:-8266837 | Msa0974870:CDS |
| TCTCAAACTGGAGGACATCT+AGG | 0.435608 | 6_4:-8269118 | Msa0974870:CDS |
| CTTGTGGGATGTTGGCCATC+AGG | 0.437600 | 6_4:-8269026 | Msa0974870:intron |
| AGGACATCTAGGATCGAATC+TGG | 0.438050 | 6_4:-8269107 | Msa0974870:CDS |
| TAGGAGCATTGAAAACATAA+TGG | 0.438816 | 6_4:+8269059 | None:intergenic |
| CCTTCGAGATGTTTCGATGT+AGG | 0.439173 | 6_4:-8266663 | Msa0974870:CDS |
| TTCCGATTTCCACGGGCAAA+TGG | 0.439179 | 6_4:-8265784 | Msa0974870:CDS |
| GAAGCCGACAAAAGCATTGT+TGG | 0.443373 | 6_4:-8266741 | Msa0974870:CDS |
| CGAAACATCTCGAAGGGAAT+CGG | 0.443552 | 6_4:+8266670 | None:intergenic |
| TAGGAACTAAAACAACTTGC+GGG | 0.449908 | 6_4:-8269172 | Msa0974870:CDS |
| TTTCCACGGGCAAATGGAAC+TGG | 0.450138 | 6_4:-8265778 | Msa0974870:CDS |
| TTGTGCATCAGTATCCGAAA+TGG | 0.455448 | 6_4:-8269740 | Msa0974870:CDS |
| ACTGATGCACAAACCCCATA+TGG | 0.458213 | 6_4:+8269751 | None:intergenic |
| TCTTCTTGATGGAAAATTGA+AGG | 0.462055 | 6_4:-8265202 | Msa0974870:intron |
| GATACTTTACCGTATCCAAA+AGG | 0.462570 | 6_4:+8269689 | None:intergenic |
| TGTGCATCAGTATCCGAAAT+GGG | 0.464344 | 6_4:-8269739 | Msa0974870:CDS |
| GCAGTTTGGCTCAAAAGGAC+AGG | 0.469469 | 6_4:+8270095 | None:intergenic |
| TGCACGTTTCTGCAAGCCAT+TGG | 0.470257 | 6_4:-8265337 | Msa0974870:CDS |
| ACATGTTAACAGATAGGAAA+AGG | 0.470576 | 6_4:-8265477 | Msa0974870:intron |
| ACTGTGGAAGAAGGATCAAT+AGG | 0.471946 | 6_4:-8265267 | Msa0974870:CDS |
| TCAACACTATTTGAAGAACT+TGG | 0.472738 | 6_4:-8267202 | Msa0974870:CDS |
| AGGCAGAAAGATGGATTAAG+TGG | 0.473089 | 6_4:-8268835 | Msa0974870:CDS |
| AGATTTGTTATCGACAAAGC+TGG | 0.474221 | 6_4:-8265961 | Msa0974870:CDS |
| CGAAGCAGAGATTATGCATA+TGG | 0.475633 | 6_4:-8265845 | Msa0974870:CDS |
| TCCTATAGACAAAATCTTGT+GGG | 0.476226 | 6_4:-8269041 | Msa0974870:CDS |
| CTGAAACGATCAACTCCTCT+TGG | 0.478748 | 6_4:-8270059 | Msa0974870:CDS |
| GGCGGTGGGTAGAGATCTAA+AGG | 0.482790 | 6_4:-8268115 | Msa0974870:CDS |
| GAGATTTGACTGAAGATATC+CGG | 0.489301 | 6_4:+8268014 | None:intergenic |
| GACAAAATCTTGTGGGATGT+TGG | 0.491871 | 6_4:-8269034 | Msa0974870:CDS |
| AGCTCAACAACAATGTCAGC+AGG | 0.492313 | 6_4:-8268763 | Msa0974870:CDS |
| GAATTGCCACCAGGGAATAG+AGG | 0.510992 | 6_4:-8265751 | Msa0974870:CDS |
| GGATGTGATCATGGCATGAT+TGG | 0.512036 | 6_4:-8267235 | Msa0974870:CDS |
| CATAGCACCATCACCGATGA+TGG | 0.512307 | 6_4:+8268071 | None:intergenic |
| AACCTAACCTGGTTGAGTCT+GGG | 0.512700 | 6_4:+8269993 | None:intergenic |
| CCAGATATTTATATCGACCA+TGG | 0.516787 | 6_4:-8264833 | Msa0974870:CDS |
| GCAACAGCTAATTGCTCAGC+TGG | 0.516828 | 6_4:+8264806 | None:intergenic |
| TGCTGTCCCAAAGCCCAAAA+GGG | 0.518857 | 6_4:+8265425 | None:intergenic |
| AAACCTCATGTGATTTCGCT+AGG | 0.519301 | 6_4:+8265295 | None:intergenic |
| TCAATGCTATGACCATCAAC+AGG | 0.520276 | 6_4:+8267163 | None:intergenic |
| CAGTTTGGCTCAAAAGGACA+GGG | 0.521229 | 6_4:+8270096 | None:intergenic |
| CATCTACTCAGAGCACCAAC+TGG | 0.523518 | 6_4:+8267925 | None:intergenic |
| CTCCTATAGACAAAATCTTG+TGG | 0.525889 | 6_4:-8269042 | Msa0974870:CDS |
| ATACTTTACCGTATCCAAAA+GGG | 0.529734 | 6_4:+8269690 | None:intergenic |
| AGGTAAGGAGAAAACCATAT+GGG | 0.531352 | 6_4:-8269765 | Msa0974870:CDS |
| GGTACTCACATCATGCTTTG+CGG | 0.533753 | 6_4:-8266784 | Msa0974870:CDS |
| AACATACTTACCTTGACAAG+AGG | 0.534272 | 6_4:+8267877 | None:intergenic |
| TGGTGCTATGACTGCAGGGC+AGG | 0.534315 | 6_4:-8268058 | Msa0974870:CDS |
| GGTGATGGTGCTATGACTGC+AGG | 0.536641 | 6_4:-8268063 | Msa0974870:CDS |
| ACAACAATGTCAGCAGGGCT+AGG | 0.536842 | 6_4:-8268757 | Msa0974870:intron |
| AAGGTTGATGGATGTGATCA+TGG | 0.538673 | 6_4:-8267244 | Msa0974870:CDS |
| TAAATATCTGGAAACACCAT+TGG | 0.539217 | 6_4:+8264845 | None:intergenic |
| ATAATCTCTGCTTCGTCAGA+AGG | 0.540250 | 6_4:+8265853 | None:intergenic |
| AATAATGTGGTCACCATCAT+CGG | 0.543548 | 6_4:-8268084 | Msa0974870:CDS |
| CATACATTGAGGCAGAAAGA+TGG | 0.543587 | 6_4:-8268844 | Msa0974870:CDS |
| CTCTGAGTAGATGTCTCAGC+AGG | 0.543966 | 6_4:-8267915 | Msa0974870:CDS |
| TCTACCTAATATGGTGGTGA+TGG | 0.548667 | 6_4:-8265878 | Msa0974870:CDS |
| TGTGATCATGGCATGATTGG+TGG | 0.549795 | 6_4:-8267232 | Msa0974870:CDS |
| ATCTCGAAGGGAATCGGTGA+AGG | 0.551457 | 6_4:+8266676 | None:intergenic |
| ATACATGCTGCAATGGGAGG+TGG | 0.551655 | 6_4:-8266717 | Msa0974870:CDS |
| TAGGTAAGGAGAAAACCATA+TGG | 0.552253 | 6_4:-8269766 | Msa0974870:CDS |
| GAATAGAGGCATTCCTCTTG+AGG | 0.552272 | 6_4:-8265737 | Msa0974870:intron |
| ACCGTATCCAAAAGGGGTGT+AGG | 0.554410 | 6_4:+8269697 | None:intergenic |
| TCCATCAAGAAGACCATCAA+GGG | 0.555768 | 6_4:+8265212 | None:intergenic |
| ATACTCTAACTCACCTCAAG+AGG | 0.555952 | 6_4:+8265724 | None:intergenic |
| AGAGGAATGCCTCTATTCCC+TGG | 0.556815 | 6_4:+8265742 | None:intergenic |
| AAACGATCAACTCCTCTTGG+TGG | 0.558744 | 6_4:-8270056 | Msa0974870:CDS |
| CACGCTGTTACATTTGCCGC+AGG | 0.559010 | 6_4:-8266627 | Msa0974870:CDS |
| CTAGCTGTTTCCGATTTCCA+CGG | 0.559137 | 6_4:-8265792 | Msa0974870:CDS |
| TTCCATCAAGAAGACCATCA+AGG | 0.560580 | 6_4:+8265211 | None:intergenic |
| CGTGGAAATCGGAAACAGCT+AGG | 0.561026 | 6_4:+8265793 | None:intergenic |
| CTCCAGTTTGAGAAACACTC+TGG | 0.562966 | 6_4:+8269128 | None:intergenic |
| GCCGCAGGTCTAGCTTGTGA+AGG | 0.565344 | 6_4:-8266612 | Msa0974870:CDS |
| ATTGCTCAGCTGGTGATCCA+TGG | 0.566910 | 6_4:+8264816 | None:intergenic |
| TATCCACATAAAATTCTCAC+TGG | 0.567840 | 6_4:-8268883 | Msa0974870:CDS |
| TTGCAATCCCAGACTCAACC+AGG | 0.568095 | 6_4:-8270000 | Msa0974870:intron |
| GTGACAACATGGATTAGTAC+AGG | 0.569539 | 6_4:+8267091 | None:intergenic |
| GTTGGAATACATGCTGCAAT+GGG | 0.571998 | 6_4:-8266723 | Msa0974870:CDS |
| GAACTTGGACTTGACTACAT+TGG | 0.572725 | 6_4:-8267187 | Msa0974870:CDS |
| TGTTGGAATACATGCTGCAA+TGG | 0.575153 | 6_4:-8266724 | Msa0974870:CDS |
| TGGCTTGCTTGTCACGGTGG+CGG | 0.576309 | 6_4:-8265361 | Msa0974870:CDS |
| TCAAAAGAACCACAATGTGT+TGG | 0.576620 | 6_4:+8265919 | None:intergenic |
| ACTGGTGTAGAATTGCCACC+AGG | 0.577521 | 6_4:-8265760 | Msa0974870:CDS |
| TTTGAGGCAATGAATAATGC+CGG | 0.578565 | 6_4:-8268033 | Msa0974870:CDS |
| GTCATAAGCTCTCTGCAAGA+AGG | 0.579687 | 6_4:+8266560 | None:intergenic |
| CGAATGAGCGAACGGTCCAA+TGG | 0.582651 | 6_4:+8265321 | None:intergenic |
| GGCAGAAAGATGGATTAAGT+GGG | 0.585018 | 6_4:-8268834 | Msa0974870:CDS |
| AGCATTGAAAACATAATGGA+GGG | 0.588745 | 6_4:+8269063 | None:intergenic |
| TAGCTGTTTCCGATTTCCAC+GGG | 0.589014 | 6_4:-8265791 | Msa0974870:CDS |
| GAGCATTGAAAACATAATGG+AGG | 0.590912 | 6_4:+8269062 | None:intergenic |
| ATCAGACAAACCTCTTGTCA+AGG | 0.591557 | 6_4:-8267887 | Msa0974870:intron |
| GAGTACCGGTGTGGGAGCCT+TGG | 0.593110 | 6_4:+8266800 | None:intergenic |
| CTTGCAGAGAGCTTATGACC+AGG | 0.594809 | 6_4:-8266556 | Msa0974870:intron |
| TTCGAAGGTGGTGCATGATG+TGG | 0.595656 | 6_4:-8266004 | Msa0974870:intron |
| TATTATCCAGTGGAGGCCAA+TGG | 0.603817 | 6_4:-8264861 | Msa0974870:intron |
| GTGGTCACCATCATCGGTGA+TGG | 0.604425 | 6_4:-8268078 | Msa0974870:CDS |
| GCCTCAATATTGCAGCAACA+TGG | 0.604435 | 6_4:-8265381 | Msa0974870:CDS |
| GCGGTGGGTAGAGATCTAAA+GGG | 0.604452 | 6_4:-8268114 | Msa0974870:CDS |
| GTAGGAACTAAAACAACTTG+CGG | 0.604690 | 6_4:-8269173 | Msa0974870:intron |
| GGACATCTAGGATCGAATCT+GGG | 0.606948 | 6_4:-8269106 | Msa0974870:CDS |
| GCCATGTTGCTGCAATATTG+AGG | 0.614726 | 6_4:+8265380 | None:intergenic |
| ACAAAGAAAGGAGGCACTAG+AGG | 0.615250 | 6_4:-8264735 | Msa0974870:CDS |
| GCAAAGCATGATGTGAGTAC+CGG | 0.615355 | 6_4:+8266786 | None:intergenic |
| GGAATAAGATGCATACATTG+AGG | 0.616684 | 6_4:-8268855 | Msa0974870:CDS |
| GCAACATGGCTTGCTTGTCA+CGG | 0.617203 | 6_4:-8265367 | Msa0974870:CDS |
| CTACATCGAAACATCTCGAA+GGG | 0.619120 | 6_4:+8266664 | None:intergenic |
| GTGAAGGAAGTGATTCATGC+CGG | 0.621432 | 6_4:+8266692 | None:intergenic |
| GCTCACCGAAGGCGAAAGAG+TGG | 0.621613 | 6_4:-8265448 | Msa0974870:CDS |
| GAAGATGGTCCAACACATTG+TGG | 0.623107 | 6_4:-8265928 | Msa0974870:CDS |
| ACAAGTATCGCTACCTACCG+CGG | 0.628279 | 6_4:-8267968 | Msa0974870:CDS |
| GTGCATCAGTATCCGAAATG+GGG | 0.629009 | 6_4:-8269738 | Msa0974870:CDS |
| TACTTTACCGTATCCAAAAG+GGG | 0.632931 | 6_4:+8269691 | None:intergenic |
| GTGGAAGAAGGATCAATAGG+AGG | 0.634607 | 6_4:-8265264 | Msa0974870:CDS |
| AAAGGAAGAATGCTCACCGA+AGG | 0.635301 | 6_4:-8265459 | Msa0974870:CDS |
| AGCAGAGATTATGCATATGG+TGG | 0.641975 | 6_4:-8265842 | Msa0974870:CDS |
| TGCATCAGTATCCGAAATGG+GGG | 0.642842 | 6_4:-8269737 | Msa0974870:CDS |
| GGACCATGAAGGTCCGCGGT+AGG | 0.644302 | 6_4:+8267955 | None:intergenic |
| ACACCAGTTCCATTTGCCCG+TGG | 0.651582 | 6_4:+8265775 | None:intergenic |
| CTGGTGTAGAATTGCCACCA+GGG | 0.652032 | 6_4:-8265759 | Msa0974870:CDS |
| CGGTGGGTAGAGATCTAAAG+GGG | 0.653145 | 6_4:-8268113 | Msa0974870:CDS |
| GGTAAGGAGAAAACCATATG+GGG | 0.656189 | 6_4:-8269764 | Msa0974870:CDS |
| CATGGTCCAATACCACCAGT+TGG | 0.657891 | 6_4:-8267940 | Msa0974870:CDS |
| CATGATGTGAGTACCGGTGT+GGG | 0.658913 | 6_4:+8266792 | None:intergenic |
| CTAGGTTGCGAATGAGCGAA+CGG | 0.661008 | 6_4:+8265313 | None:intergenic |
| CAACCTAGCGAAATCACATG+AGG | 0.664346 | 6_4:-8265298 | Msa0974870:CDS |
| CTACTCAGAGCACCAACTGG+TGG | 0.665084 | 6_4:+8267928 | None:intergenic |
| CAAGACCAAGGCTCCCACAC+CGG | 0.667838 | 6_4:-8266805 | Msa0974870:CDS |
| CCTACATCGAAACATCTCGA+AGG | 0.669459 | 6_4:+8266663 | None:intergenic |
| CAGAGTGTTTCTCAAACTGG+AGG | 0.670619 | 6_4:-8269127 | Msa0974870:CDS |
| ACATGGCTTGCTTGTCACGG+TGG | 0.671087 | 6_4:-8265364 | Msa0974870:CDS |
| GCTCAACAACAATGTCAGCA+GGG | 0.672469 | 6_4:-8268762 | Msa0974870:CDS |
| AATTCTTGGACAAAGAAAGG+AGG | 0.672979 | 6_4:-8264744 | Msa0974870:CDS |
| TGGAAAACAGTTCAAGACCA+AGG | 0.680209 | 6_4:-8266817 | Msa0974870:CDS |
| ACCTTCACAAGCTAGACCTG+CGG | 0.682356 | 6_4:+8266611 | None:intergenic |
| GTGATGGTGCTATGACTGCA+GGG | 0.687716 | 6_4:-8268062 | Msa0974870:CDS |
| GGAATACATGCTGCAATGGG+AGG | 0.692170 | 6_4:-8266720 | Msa0974870:CDS |
| CTGGTGGTATTGGACCATGA+AGG | 0.697503 | 6_4:+8267944 | None:intergenic |
| GGCATGTCTACCTAATATGG+TGG | 0.702209 | 6_4:-8265884 | Msa0974870:CDS |
| GCATGATGTGAGTACCGGTG+TGG | 0.705105 | 6_4:+8266791 | None:intergenic |
| GGAATGCCTCTATTCCCTGG+TGG | 0.706633 | 6_4:+8265745 | None:intergenic |
| TATTGGACCATGAAGGTCCG+CGG | 0.710162 | 6_4:+8267951 | None:intergenic |
| GGTGGTTCTAACTATCAATG+GGG | 0.716011 | 6_4:-8270038 | Msa0974870:CDS |
| TGATAGTTAGAACCACCAAG+AGG | 0.716360 | 6_4:+8270044 | None:intergenic |
| AAAGCAGCAGACAAGTACCA+TGG | 0.719356 | 6_4:-8267037 | Msa0974870:intron |
| GGTGGGTAGAGATCTAAAGG+GGG | 0.788838 | 6_4:-8268112 | Msa0974870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTTTGTTAAAAAAAT+AGG | + | chr6_4:8265484-8265503 | None:intergenic | 10.0% |
| !!! | TATTTTATTTATATAAGCTA+TGG | + | chr6_4:8266160-8266179 | None:intergenic | 10.0% |
| !!! | AATATAGTCAAATATTTTTT+TGG | + | chr6_4:8266517-8266536 | None:intergenic | 10.0% |
| !!! | ACTTTTTAAAATTTCAAATT+TGG | - | chr6_4:8267319-8267338 | Msa0974870:intron | 10.0% |
| !!! | ATGAGAATTTTTAAATATTT+GGG | + | chr6_4:8267345-8267364 | None:intergenic | 10.0% |
| !!! | AATGAGAATTTTTAAATATT+TGG | + | chr6_4:8267346-8267365 | None:intergenic | 10.0% |
| !! | AATACTATGTATAATATATA+AGG | - | chr6_4:8268324-8268343 | Msa0974870:intron | 10.0% |
| !!! | TGTATAATTTTTTTTTGAAA+AGG | - | chr6_4:8268356-8268375 | Msa0974870:intron | 10.0% |
| !! | AACAAAATTGAGTATAATAT+TGG | + | chr6_4:8265442-8265461 | None:intergenic | 15.0% |
| !!! | ATATTATACTCAATTTTGTT+TGG | - | chr6_4:8265442-8265461 | Msa0974870:CDS | 15.0% |
| !! | TGTAGTTAAAAATTCATAAT+TGG | + | chr6_4:8265565-8265584 | None:intergenic | 15.0% |
| !! | TCATGTAATAAAATTGTTAA+TGG | - | chr6_4:8265599-8265618 | Msa0974870:intron | 15.0% |
| !!! | TAATAAAATTGTTAATGGAT+TGG | - | chr6_4:8265604-8265623 | Msa0974870:intron | 15.0% |
| !! | TTTGAAAAAATCTATGTTAT+TGG | - | chr6_4:8265880-8265899 | Msa0974870:CDS | 15.0% |
| !!! | TTCTGATTTTATTTTTCTTT+TGG | - | chr6_4:8266448-8266467 | Msa0974870:intron | 15.0% |
| !! | ACATAAAAATTAGAATACTT+GGG | + | chr6_4:8266492-8266511 | None:intergenic | 15.0% |
| !! | TACATAAAAATTAGAATACT+TGG | + | chr6_4:8266493-8266512 | None:intergenic | 15.0% |
| !!! | CATAATTTGAAACTATAATA+AGG | + | chr6_4:8267165-8267184 | None:intergenic | 15.0% |
| !!! | TGCAATTTCTAAAAATATTA+GGG | + | chr6_4:8267258-8267277 | None:intergenic | 15.0% |
| !!! | TTGCAATTTCTAAAAATATT+AGG | + | chr6_4:8267259-8267278 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTAAAAAGTTGA+TGG | + | chr6_4:8267316-8267335 | None:intergenic | 15.0% |
| !! | TTATAAAGTGTAAAAGTTAT+GGG | + | chr6_4:8267404-8267423 | None:intergenic | 15.0% |
| !! | TTTATAAAGTGTAAAAGTTA+TGG | + | chr6_4:8267405-8267424 | None:intergenic | 15.0% |
| !!! | TTTAGGAAAATTAGAATTTT+AGG | + | chr6_4:8267523-8267542 | None:intergenic | 15.0% |
| !! | TTTAATTATACATATCTTTC+GGG | + | chr6_4:8268709-8268728 | None:intergenic | 15.0% |
| !! | CTTTAATTATACATATCTTT+CGG | + | chr6_4:8268710-8268729 | None:intergenic | 15.0% |
| !! | AAGTGAATTTATTCTAATAA+TGG | + | chr6_4:8269258-8269277 | None:intergenic | 15.0% |
| !! | ATTATTAGAATAAATTCACT+TGG | - | chr6_4:8269257-8269276 | Msa0974870:intron | 15.0% |
| !!! | TATATTTAAACCAACTTGTT+TGG | - | chr6_4:8264902-8264921 | Msa0974870:intron | 20.0% |
| !! | AAAAAAAAAACCAAACAAGT+TGG | + | chr6_4:8264915-8264934 | None:intergenic | 20.0% |
| !! | ATAAGAATTTCACTATAAAC+TGG | - | chr6_4:8265258-8265277 | Msa0974870:CDS | 20.0% |
| !! | TAATGAACATGTAATGAATA+TGG | - | chr6_4:8265289-8265308 | Msa0974870:CDS | 20.0% |
| !! | AAAAAAATAGGCAATTTCTA+CGG | + | chr6_4:8265472-8265491 | None:intergenic | 20.0% |
| !! | ACAAAAAATGTGTAAAAACA+TGG | - | chr6_4:8265493-8265512 | Msa0974870:intron | 20.0% |
| !! | TCTATATCATTTATTGATGT+AGG | - | chr6_4:8265655-8265674 | Msa0974870:intron | 20.0% |
| !! | TATATTACACTTCAATTTGA+AGG | - | chr6_4:8266324-8266343 | Msa0974870:intron | 20.0% |
| !! | AGTGTTTATTATTTACCAAT+AGG | - | chr6_4:8266408-8266427 | Msa0974870:intron | 20.0% |
| !!! | ATATAGCTTTTGCAAAATTA+CGG | + | chr6_4:8267034-8267053 | None:intergenic | 20.0% |
| !!! | TTTTTTGTCAAAGATAAAGT+TGG | - | chr6_4:8267138-8267157 | Msa0974870:CDS | 20.0% |
| !!! | ATGTTTTAAAACATACACAT+TGG | - | chr6_4:8267200-8267219 | Msa0974870:CDS | 20.0% |
| !!! | ATGAGGTAATTGAAAATTTT+AGG | + | chr6_4:8267540-8267559 | None:intergenic | 20.0% |
| !! | TAATAAGTGGTGAATTTATT+AGG | + | chr6_4:8267883-8267902 | None:intergenic | 20.0% |
| !! | TTAATTATACATATCTTTCG+GGG | + | chr6_4:8268708-8268727 | None:intergenic | 20.0% |
| !! | CTTTCTAATAATCTTCATAA+GGG | + | chr6_4:8269174-8269193 | None:intergenic | 20.0% |
| !! | TCTTTCTAATAATCTTCATA+AGG | + | chr6_4:8269175-8269194 | None:intergenic | 20.0% |
| !! | ATCTAATGCAATTATTTAGT+GGG | + | chr6_4:8269285-8269304 | None:intergenic | 20.0% |
| !! | AATCTAATGCAATTATTTAG+TGG | + | chr6_4:8269286-8269305 | None:intergenic | 20.0% |
| !!! | ATTTCTCTTTAAAACAGTTT+TGG | - | chr6_4:8269319-8269338 | Msa0974870:intron | 20.0% |
| !!! | TAATTTTTTTTCCTCATTGA+CGG | - | chr6_4:8269848-8269867 | Msa0974870:intron | 20.0% |
| !! | ATTAAACCAACTTGTTTGTT+TGG | - | chr6_4:8264968-8264987 | Msa0974870:intron | 25.0% |
| ! | AAAAAACCAAACAAACAAGT+TGG | + | chr6_4:8264977-8264996 | None:intergenic | 25.0% |
| ! | TTCCATCATTAAAATTGAGA+TGG | - | chr6_4:8265013-8265032 | Msa0974870:intron | 25.0% |
| ! | TCCATCATTAAAATTGAGAT+GGG | - | chr6_4:8265014-8265033 | Msa0974870:intron | 25.0% |
| ! | GTCTAATTATGAATGTATGT+AGG | - | chr6_4:8265061-8265080 | Msa0974870:intron | 25.0% |
| ! | ATTATGAATGTATGTAGGTA+AGG | - | chr6_4:8265066-8265085 | Msa0974870:intron | 25.0% |
| ! | TCTAACGATTAAGGTAAAAT+AGG | - | chr6_4:8265196-8265215 | Msa0974870:intron | 25.0% |
| ! | TTTCACTATAAACTGGTTAA+TGG | - | chr6_4:8265265-8265284 | Msa0974870:CDS | 25.0% |
| ! | TGTATATTTGAACACTTGAA+AGG | + | chr6_4:8265336-8265355 | None:intergenic | 25.0% |
| ! | AATATTGTGCTCAAATACTA+GGG | - | chr6_4:8265403-8265422 | Msa0974870:CDS | 25.0% |
| ! | TAAGATATCCCATATTATGA+TGG | - | chr6_4:8265526-8265545 | Msa0974870:intron | 25.0% |
| !! | AATTCATAATTGGCTCATAA+GGG | + | chr6_4:8265555-8265574 | None:intergenic | 25.0% |
| !! | AAATTCATAATTGGCTCATA+AGG | + | chr6_4:8265556-8265575 | None:intergenic | 25.0% |
| !!! | TTAGTACTAGTTGATTTTCT+AGG | - | chr6_4:8265906-8265925 | Msa0974870:CDS | 25.0% |
| !! | GTCTCTAAATATTTTGTCTT+GGG | + | chr6_4:8266376-8266395 | None:intergenic | 25.0% |
| !! | TGTCTCTAAATATTTTGTCT+TGG | + | chr6_4:8266377-8266396 | None:intergenic | 25.0% |
| ! | ACTGAAAAGATATTTCCTAT+TGG | + | chr6_4:8266426-8266445 | None:intergenic | 25.0% |
| ! | GCTTTATATTAATGCACAAT+TGG | - | chr6_4:8266657-8266676 | Msa0974870:CDS | 25.0% |
| ! | ACATCGAAGAAATTCATTTA+TGG | + | chr6_4:8267058-8267077 | None:intergenic | 25.0% |
| ! | TCGATGTAAAATTTACTGTT+TGG | - | chr6_4:8267071-8267090 | Msa0974870:CDS | 25.0% |
| ! | TACTGTTTGGATGATAAATT+TGG | - | chr6_4:8267084-8267103 | Msa0974870:CDS | 25.0% |
| !! | ATTCAATCAAAGCATTTGAA+TGG | - | chr6_4:8267497-8267516 | Msa0974870:intron | 25.0% |
| ! | ATTGAATGAGCAATAATAAG+TGG | + | chr6_4:8267896-8267915 | None:intergenic | 25.0% |
| ! | TAGTATTAAATTACACTACC+TGG | + | chr6_4:8268311-8268330 | None:intergenic | 25.0% |
| ! | TAATTATACATATCTTTCGG+GGG | + | chr6_4:8268707-8268726 | None:intergenic | 25.0% |
| ! | TGTTGTACAATATGCTATAT+GGG | + | chr6_4:8268779-8268798 | None:intergenic | 25.0% |
| ! | ATGTTGTACAATATGCTATA+TGG | + | chr6_4:8268780-8268799 | None:intergenic | 25.0% |
| !!! | TTCTTTTGATGTCACTTATA+TGG | - | chr6_4:8268941-8268960 | Msa0974870:intron | 25.0% |
| !! | TGTTGAACTTTTTACATTGA+CGG | + | chr6_4:8269727-8269746 | None:intergenic | 25.0% |
| !! | GATCATATTGTTTTGCAGTT+TGG | + | chr6_4:8264768-8264787 | None:intergenic | 30.0% |
| TTCAACAAAAAAACCTAACC+TGG | + | chr6_4:8264867-8264886 | None:intergenic | 30.0% | |
| !! | TCCCATCTCAATTTTAATGA+TGG | + | chr6_4:8265018-8265037 | None:intergenic | 30.0% |
| ATACTTTACCGTATCCAAAA+GGG | + | chr6_4:8265159-8265178 | None:intergenic | 30.0% | |
| TATGAAGACTCTAACGATTA+AGG | - | chr6_4:8265187-8265206 | Msa0974870:intron | 30.0% | |
| CAATATTGTGCTCAAATACT+AGG | - | chr6_4:8265402-8265421 | Msa0974870:CDS | 30.0% | |
| ATATTGTGCTCAAATACTAG+GGG | - | chr6_4:8265404-8265423 | Msa0974870:CDS | 30.0% | |
| ! | ATTCATAATTGGCTCATAAG+GGG | + | chr6_4:8265554-8265573 | None:intergenic | 30.0% |
| ! | AGCATTGAAAACATAATGGA+GGG | + | chr6_4:8265786-8265805 | None:intergenic | 30.0% |
| !! | TAGGAGCATTGAAAACATAA+TGG | + | chr6_4:8265790-8265809 | None:intergenic | 30.0% |
| TCCTATAGACAAAATCTTGT+GGG | - | chr6_4:8265805-8265824 | Msa0974870:CDS | 30.0% | |
| TATCCACATAAAATTCTCAC+TGG | - | chr6_4:8265963-8265982 | Msa0974870:CDS | 30.0% | |
| ATAAAATTCTCACTGGTAGA+AGG | - | chr6_4:8265970-8265989 | Msa0974870:CDS | 30.0% | |
| !! | GAGAGTGAATTTGATAGTTT+TGG | - | chr6_4:8266050-8266069 | Msa0974870:intron | 30.0% |
| TCACGAAAGCTTAAATTGTT+AGG | - | chr6_4:8266582-8266601 | Msa0974870:CDS | 30.0% | |
| ! | TGACATTTTACTCCAAAAAC+AGG | - | chr6_4:8266705-8266724 | Msa0974870:CDS | 30.0% |
| ! | TTTTACTCCAAAAACAGGAA+TGG | - | chr6_4:8266710-8266729 | Msa0974870:CDS | 30.0% |
| GTGTAAAAGTTATGGGATAA+AGG | + | chr6_4:8267397-8267416 | None:intergenic | 30.0% | |
| CTTCATTCTTAAACTTTGCT+CGG | + | chr6_4:8267433-8267452 | None:intergenic | 30.0% | |
| TCAACACTATTTGAAGAACT+TGG | - | chr6_4:8267644-8267663 | Msa0974870:intron | 30.0% | |
| !! | ACTCTTAACTTGTTTGAGAA+TGG | + | chr6_4:8267720-8267739 | None:intergenic | 30.0% |
| ! | TATTCCAACAATGCTTTTGT+CGG | + | chr6_4:8268112-8268131 | None:intergenic | 30.0% |
| GGGAAGAAAAAAATACAACA+AGG | - | chr6_4:8268430-8268449 | Msa0974870:intron | 30.0% | |
| !!! | ATTGGTTTTGGGTTGTTTTT+TGG | + | chr6_4:8268484-8268503 | None:intergenic | 30.0% |
| AAACAACCCAAAACCAATAA+AGG | - | chr6_4:8268486-8268505 | Msa0974870:intron | 30.0% | |
| TACAATATGCTATATGGGAT+CGG | + | chr6_4:8268774-8268793 | None:intergenic | 30.0% | |
| TATATTTCATGTCCATTCGA+AGG | - | chr6_4:8268827-8268846 | Msa0974870:CDS | 30.0% | |
| TTGTCGATAACAAATCTTAC+TGG | + | chr6_4:8268882-8268901 | None:intergenic | 30.0% | |
| ! | ATAAAGTATTCGTGCAGAAA+TGG | + | chr6_4:8269235-8269254 | None:intergenic | 30.0% |
| !! | GTTTTGACATGTTAACAGAT+AGG | - | chr6_4:8269363-8269382 | Msa0974870:intron | 30.0% |
| ACATGTTAACAGATAGGAAA+AGG | - | chr6_4:8269369-8269388 | Msa0974870:intron | 30.0% | |
| TCTTCTTGATGGAAAATTGA+AGG | - | chr6_4:8269644-8269663 | Msa0974870:intron | 30.0% | |
| TTGTGTTTCATATTATCCAG+TGG | - | chr6_4:8269975-8269994 | Msa0974870:intron | 30.0% | |
| TAAATATCTGGAAACACCAT+TGG | + | chr6_4:8270004-8270023 | None:intergenic | 30.0% | |
| ! | GCAACAGTTTTCAAAATTCT+TGG | - | chr6_4:8270088-8270107 | Msa0974870:CDS | 30.0% |
| CAAAATTCTTGGACAAAGAA+AGG | - | chr6_4:8270099-8270118 | Msa0974870:CDS | 30.0% | |
| !! | TTGGTGGTTCTAACTATCAA+TGG | - | chr6_4:8264806-8264825 | Msa0974870:CDS | 35.0% |
| !! | TGGTGGTTCTAACTATCAAT+GGG | - | chr6_4:8264807-8264826 | Msa0974870:CDS | 35.0% |
| TAGGTAAGGAGAAAACCATA+TGG | - | chr6_4:8265080-8265099 | Msa0974870:intron | 35.0% | |
| AGGTAAGGAGAAAACCATAT+GGG | - | chr6_4:8265081-8265100 | Msa0974870:intron | 35.0% | |
| TACTTTACCGTATCCAAAAG+GGG | + | chr6_4:8265158-8265177 | None:intergenic | 35.0% | |
| GATACTTTACCGTATCCAAA+AGG | + | chr6_4:8265160-8265179 | None:intergenic | 35.0% | |
| GTTAGAGTCTTCATATCTTC+GGG | + | chr6_4:8265182-8265201 | None:intergenic | 35.0% | |
| CGTTAGAGTCTTCATATCTT+CGG | + | chr6_4:8265183-8265202 | None:intergenic | 35.0% | |
| GAACATGTAATGAATATGGC+AGG | - | chr6_4:8265293-8265312 | Msa0974870:CDS | 35.0% | |
| !! | AAGGGGTACCATCATAATAT+GGG | + | chr6_4:8265537-8265556 | None:intergenic | 35.0% |
| !! | TAAGGGGTACCATCATAATA+TGG | + | chr6_4:8265538-8265557 | None:intergenic | 35.0% |
| GTAGGAACTAAAACAACTTG+CGG | - | chr6_4:8265673-8265692 | Msa0974870:intron | 35.0% | |
| TAGGAACTAAAACAACTTGC+GGG | - | chr6_4:8265674-8265693 | Msa0974870:intron | 35.0% | |
| !! | GAGCATTGAAAACATAATGG+AGG | + | chr6_4:8265787-8265806 | None:intergenic | 35.0% |
| CTCCTATAGACAAAATCTTG+TGG | - | chr6_4:8265804-8265823 | Msa0974870:CDS | 35.0% | |
| ! | TCCCACAAGATTTTGTCTAT+AGG | + | chr6_4:8265809-8265828 | None:intergenic | 35.0% |
| ! | TAGGAGTATAATCAACCTGA+TGG | + | chr6_4:8265838-8265857 | None:intergenic | 35.0% |
| ! | CTACCAGTGAGAATTTTATG+TGG | + | chr6_4:8265969-8265988 | None:intergenic | 35.0% |
| GGAATAAGATGCATACATTG+AGG | - | chr6_4:8265991-8266010 | Msa0974870:CDS | 35.0% | |
| !!! | GAATTTGATAGTTTTGGCAC+TGG | - | chr6_4:8266056-8266075 | Msa0974870:intron | 35.0% |
| !!! | GTTTCTAGCCAGAAATTTTC+AGG | - | chr6_4:8266134-8266153 | Msa0974870:intron | 35.0% |
| AATTTAAGCTTTCGTGAGAG+AGG | + | chr6_4:8266579-8266598 | None:intergenic | 35.0% | |
| TGCACAATTGGATTTGTGAT+CGG | - | chr6_4:8266669-8266688 | Msa0974870:CDS | 35.0% | |
| AATAATGTGGTCACCATCAT+CGG | - | chr6_4:8266762-8266781 | Msa0974870:CDS | 35.0% | |
| ! | TTTGAGGCAATGAATAATGC+CGG | - | chr6_4:8266813-8266832 | Msa0974870:CDS | 35.0% |
| GAGATTTGACTGAAGATATC+CGG | + | chr6_4:8266835-8266854 | None:intergenic | 35.0% | |
| AACATACTTACCTTGACAAG+AGG | + | chr6_4:8266972-8266991 | None:intergenic | 35.0% | |
| TCTTGTCAAGGTAAGTATGT+TGG | - | chr6_4:8266971-8266990 | Msa0974870:intron | 35.0% | |
| TTACCTCATTCAAGTACACT+CGG | - | chr6_4:8267551-8267570 | Msa0974870:intron | 35.0% | |
| GTGAATATTGCTAAGGTTGA+TGG | - | chr6_4:8267590-8267609 | Msa0974870:intron | 35.0% | |
| GTTAAGAGTCCTAAGAAAAC+TGG | - | chr6_4:8267731-8267750 | Msa0974870:intron | 35.0% | |
| ATCCATGTTGTCACTGAAAA+AGG | - | chr6_4:8267764-8267783 | Msa0974870:intron | 35.0% | |
| TGACTTTCTACTTTCATGAC+AGG | - | chr6_4:8267956-8267975 | Msa0974870:CDS | 35.0% | |
| !!! | CTAACATGGTTTAGTTTTGC+AGG | - | chr6_4:8267982-8268001 | Msa0974870:CDS | 35.0% |
| GACGAGTAAATTGCACAAAA+AGG | + | chr6_4:8268267-8268286 | None:intergenic | 35.0% | |
| !!! | TTTTGGGTTGTTTTTTGGTG+TGG | + | chr6_4:8268479-8268498 | None:intergenic | 35.0% |
| !!! | TTTTGGGTTTTTCGGTTTTG+AGG | + | chr6_4:8268563-8268582 | None:intergenic | 35.0% |
| AAACCGAAAAACCCAAAAAC+AGG | - | chr6_4:8268565-8268584 | Msa0974870:intron | 35.0% | |
| AGTGTCTTTCAGTTCTGTTT+GGG | + | chr6_4:8268684-8268703 | None:intergenic | 35.0% | |
| ! | AAAGCTCATTTCTTTTCACG+TGG | - | chr6_4:8268726-8268745 | Msa0974870:intron | 35.0% |
| ! | AAGCTCATTTCTTTTCACGT+GGG | - | chr6_4:8268727-8268746 | Msa0974870:intron | 35.0% |
| ACAATATGCTATATGGGATC+GGG | + | chr6_4:8268773-8268792 | None:intergenic | 35.0% | |
| !! | AGATTTGTTATCGACAAAGC+TGG | - | chr6_4:8268885-8268904 | Msa0974870:CDS | 35.0% |
| TCAAAAGAACCACAATGTGT+TGG | + | chr6_4:8268930-8268949 | None:intergenic | 35.0% | |
| TATGGCATGTCTACCTAATA+TGG | - | chr6_4:8268959-8268978 | Msa0974870:intron | 35.0% | |
| TGCATTAGATTGTGTATTGC+TGG | - | chr6_4:8269295-8269314 | Msa0974870:intron | 35.0% | |
| CTAAAGTCGCACAAATGATT+GGG | + | chr6_4:8269766-8269785 | None:intergenic | 35.0% | |
| ! | TCTAAAGTCGCACAAATGAT+TGG | + | chr6_4:8269767-8269786 | None:intergenic | 35.0% |
| !!! | TTTTTTTTCCTCATTGACGG+CGG | - | chr6_4:8269851-8269870 | Msa0974870:intron | 35.0% |
| TGTTTCATATTATCCAGTGG+AGG | - | chr6_4:8269978-8269997 | Msa0974870:intron | 35.0% | |
| CCATGGTCGATATAAATATC+TGG | + | chr6_4:8270016-8270035 | None:intergenic | 35.0% | |
| CCAGATATTTATATCGACCA+TGG | - | chr6_4:8270013-8270032 | Msa0974870:CDS | 35.0% | |
| ! | AAAACTGTTGCTGCTATTTG+AGG | + | chr6_4:8270079-8270098 | None:intergenic | 35.0% |
| AATTCTTGGACAAAGAAAGG+AGG | - | chr6_4:8270102-8270121 | Msa0974870:CDS | 35.0% | |
| !! | GTTTTGCAGTTTGGCTCAAA+AGG | + | chr6_4:8264759-8264778 | None:intergenic | 40.0% |
| TGATAGTTAGAACCACCAAG+AGG | + | chr6_4:8264805-8264824 | None:intergenic | 40.0% | |
| !! | GGTGGTTCTAACTATCAATG+GGG | - | chr6_4:8264808-8264827 | Msa0974870:CDS | 40.0% |
| GGTAAGGAGAAAACCATATG+GGG | - | chr6_4:8265082-8265101 | Msa0974870:intron | 40.0% | |
| TTGTGCATCAGTATCCGAAA+TGG | - | chr6_4:8265106-8265125 | Msa0974870:intron | 40.0% | |
| TGTGCATCAGTATCCGAAAT+GGG | - | chr6_4:8265107-8265126 | Msa0974870:intron | 40.0% | |
| ! | ATCCAGAGTGTTTCTCAAAC+TGG | - | chr6_4:8265716-8265735 | Msa0974870:intron | 40.0% |
| GACAAAATCTTGTGGGATGT+TGG | - | chr6_4:8265812-8265831 | Msa0974870:CDS | 40.0% | |
| ! | CTCTCTTGTGTGAATTTTGC+AGG | - | chr6_4:8265938-8265957 | Msa0974870:CDS | 40.0% |
| CATACATTGAGGCAGAAAGA+TGG | - | chr6_4:8266002-8266021 | Msa0974870:intron | 40.0% | |
| !! | AGGCAGAAAGATGGATTAAG+TGG | - | chr6_4:8266011-8266030 | Msa0974870:intron | 40.0% |
| !! | GGCAGAAAGATGGATTAAGT+GGG | - | chr6_4:8266012-8266031 | Msa0974870:intron | 40.0% |
| AGCTATGGCCTGAAAATTTC+TGG | + | chr6_4:8266145-8266164 | None:intergenic | 40.0% | |
| TACTCCAAAAACAGGAATGG+CGG | - | chr6_4:8266713-8266732 | Msa0974870:CDS | 40.0% | |
| AAAGGGGGACAACAATAATG+TGG | - | chr6_4:8266749-8266768 | Msa0974870:CDS | 40.0% | |
| ATCAGACAAACCTCTTGTCA+AGG | - | chr6_4:8266959-8266978 | Msa0974870:intron | 40.0% | |
| ! | GGTAAGTATGTTGGCTATCA+TGG | - | chr6_4:8266980-8266999 | Msa0974870:intron | 40.0% |
| TTTCCGAGTGTACTTGAATG+AGG | + | chr6_4:8267557-8267576 | None:intergenic | 40.0% | |
| CACAGCTGTGAATATTGCTA+AGG | - | chr6_4:8267583-8267602 | Msa0974870:intron | 40.0% | |
| !! | AAGGTTGATGGATGTGATCA+TGG | - | chr6_4:8267602-8267621 | Msa0974870:intron | 40.0% |
| GAACTTGGACTTGACTACAT+TGG | - | chr6_4:8267659-8267678 | Msa0974870:intron | 40.0% | |
| TCAATGCTATGACCATCAAC+AGG | + | chr6_4:8267686-8267705 | None:intergenic | 40.0% | |
| ! | AGTACAGGACCAGTTTTCTT+AGG | + | chr6_4:8267743-8267762 | None:intergenic | 40.0% |
| !! | GTGACAACATGGATTAGTAC+AGG | + | chr6_4:8267758-8267777 | None:intergenic | 40.0% |
| !!! | TGCCTTTTTCAGTGACAACA+TGG | + | chr6_4:8267769-8267788 | None:intergenic | 40.0% |
| ! | GTTGTCACTGAAAAAGGCAT+AGG | - | chr6_4:8267770-8267789 | Msa0974870:intron | 40.0% |
| TTGTAATGCCTGTTGTACCA+TGG | + | chr6_4:8267829-8267848 | None:intergenic | 40.0% | |
| TTCATGACAGGCATCTAACA+TGG | - | chr6_4:8267968-8267987 | Msa0974870:CDS | 40.0% | |
| ! | TTGAACTGTTTTCCAGTTGC+AGG | + | chr6_4:8268024-8268043 | None:intergenic | 40.0% |
| TGGAAAACAGTTCAAGACCA+AGG | - | chr6_4:8268029-8268048 | Msa0974870:CDS | 40.0% | |
| TGTTGGAATACATGCTGCAA+TGG | - | chr6_4:8268122-8268141 | Msa0974870:CDS | 40.0% | |
| GTTGGAATACATGCTGCAAT+GGG | - | chr6_4:8268123-8268142 | Msa0974870:intron | 40.0% | |
| CTACATCGAAACATCTCGAA+GGG | + | chr6_4:8268185-8268204 | None:intergenic | 40.0% | |
| CTTCGAGATGTTTCGATGTA+GGG | - | chr6_4:8268184-8268203 | Msa0974870:intron | 40.0% | |
| !! | AACAAGGTGCCGCATATATA+CGG | - | chr6_4:8268446-8268465 | Msa0974870:intron | 40.0% |
| !!! | TCGAGGCCTTTATTGGTTTT+GGG | + | chr6_4:8268495-8268514 | None:intergenic | 40.0% |
| !!! | TTCGAGGCCTTTATTGGTTT+TGG | + | chr6_4:8268496-8268515 | None:intergenic | 40.0% |
| !!! | CAGCCTGTTTTTGGGTTTTT+CGG | + | chr6_4:8268571-8268590 | None:intergenic | 40.0% |
| !! | GTTAGGTTGTGTTGCTGTTT+CGG | + | chr6_4:8268644-8268663 | None:intergenic | 40.0% |
| GAGTGTCTTTCAGTTCTGTT+TGG | + | chr6_4:8268685-8268704 | None:intergenic | 40.0% | |
| ATTTCATGTCCATTCGAAGG+TGG | - | chr6_4:8268830-8268849 | Msa0974870:CDS | 40.0% | |
| ATCGACAAAGCTGGATTTGT+TGG | - | chr6_4:8268894-8268913 | Msa0974870:intron | 40.0% | |
| ! | TCTACCTAATATGGTGGTGA+TGG | - | chr6_4:8268968-8268987 | Msa0974870:intron | 40.0% |
| ATAATCTCTGCTTCGTCAGA+AGG | + | chr6_4:8268996-8269015 | None:intergenic | 40.0% | |
| CGAAGCAGAGATTATGCATA+TGG | - | chr6_4:8269001-8269020 | Msa0974870:intron | 40.0% | |
| AGCAGAGATTATGCATATGG+TGG | - | chr6_4:8269004-8269023 | Msa0974870:intron | 40.0% | |
| ATACTCTAACTCACCTCAAG+AGG | + | chr6_4:8269125-8269144 | None:intergenic | 40.0% | |
| AAACCTCATGTGATTTCGCT+AGG | + | chr6_4:8269554-8269573 | None:intergenic | 40.0% | |
| !! | ACATGAGGTTTTGATCACTG+TGG | - | chr6_4:8269563-8269582 | Msa0974870:intron | 40.0% |
| !! | GTTTTGATCACTGTGGAAGA+AGG | - | chr6_4:8269570-8269589 | Msa0974870:intron | 40.0% |
| ACTGTGGAAGAAGGATCAAT+AGG | - | chr6_4:8269579-8269598 | Msa0974870:intron | 40.0% | |
| GAAGGATCAATAGGAGGATT+TGG | - | chr6_4:8269588-8269607 | Msa0974870:intron | 40.0% | |
| TTCTCATGTTGCTCAGTTCA+TGG | - | chr6_4:8269611-8269630 | Msa0974870:intron | 40.0% | |
| TCCATCAAGAAGACCATCAA+GGG | + | chr6_4:8269637-8269656 | None:intergenic | 40.0% | |
| TTCCATCAAGAAGACCATCA+AGG | + | chr6_4:8269638-8269657 | None:intergenic | 40.0% | |
| ! | CAGTTTGGCTCAAAAGGACA+GGG | + | chr6_4:8264753-8264772 | None:intergenic | 45.0% |
| CTGAAACGATCAACTCCTCT+TGG | - | chr6_4:8264787-8264806 | Msa0974870:CDS | 45.0% | |
| AAACGATCAACTCCTCTTGG+TGG | - | chr6_4:8264790-8264809 | Msa0974870:CDS | 45.0% | |
| AACCTAACCTGGTTGAGTCT+GGG | + | chr6_4:8264856-8264875 | None:intergenic | 45.0% | |
| AAACCTAACCTGGTTGAGTC+TGG | + | chr6_4:8264857-8264876 | None:intergenic | 45.0% | |
| ACTGATGCACAAACCCCATA+TGG | + | chr6_4:8265098-8265117 | None:intergenic | 45.0% | |
| GTGCATCAGTATCCGAAATG+GGG | - | chr6_4:8265108-8265127 | Msa0974870:intron | 45.0% | |
| TGCATCAGTATCCGAAATGG+GGG | - | chr6_4:8265109-8265128 | Msa0974870:intron | 45.0% | |
| CTTATACTCCTCCCCCATTT+CGG | + | chr6_4:8265123-8265142 | None:intergenic | 45.0% | |
| ! | GAAGAAACCTACACCCCTTT+TGG | - | chr6_4:8265142-8265161 | Msa0974870:intron | 45.0% |
| ! | ACCTACACCCCTTTTGGATA+CGG | - | chr6_4:8265148-8265167 | Msa0974870:intron | 45.0% |
| CTCCAGTTTGAGAAACACTC+TGG | + | chr6_4:8265721-8265740 | None:intergenic | 45.0% | |
| ! | CAGAGTGTTTCTCAAACTGG+AGG | - | chr6_4:8265719-8265738 | Msa0974870:intron | 45.0% |
| TCTCAAACTGGAGGACATCT+AGG | - | chr6_4:8265728-8265747 | Msa0974870:intron | 45.0% | |
| ! | AGGACATCTAGGATCGAATC+TGG | - | chr6_4:8265739-8265758 | Msa0974870:CDS | 45.0% |
| ! | GGACATCTAGGATCGAATCT+GGG | - | chr6_4:8265740-8265759 | Msa0974870:CDS | 45.0% |
| AGCTCAACAACAATGTCAGC+AGG | - | chr6_4:8266083-8266102 | Msa0974870:intron | 45.0% | |
| GCTCAACAACAATGTCAGCA+GGG | - | chr6_4:8266084-8266103 | Msa0974870:intron | 45.0% | |
| AGCTCAGTGTGATTTCGACA+AGG | + | chr6_4:8267010-8267029 | None:intergenic | 45.0% | |
| GGATGTGATCATGGCATGAT+TGG | - | chr6_4:8267611-8267630 | Msa0974870:intron | 45.0% | |
| TGTGATCATGGCATGATTGG+TGG | - | chr6_4:8267614-8267633 | Msa0974870:intron | 45.0% | |
| GACTACATTGGTCCTGTTGA+TGG | - | chr6_4:8267671-8267690 | Msa0974870:intron | 45.0% | |
| AAAGCAGCAGACAAGTACCA+TGG | - | chr6_4:8267809-8267828 | Msa0974870:intron | 45.0% | |
| GACAAGTACCATGGTACAAC+AGG | - | chr6_4:8267818-8267837 | Msa0974870:intron | 45.0% | |
| GCTAAGTTTGATCCTGCAAC+TGG | - | chr6_4:8268009-8268028 | Msa0974870:CDS | 45.0% | |
| GCAAAGCATGATGTGAGTAC+CGG | + | chr6_4:8268063-8268082 | None:intergenic | 45.0% | |
| GGTACTCACATCATGCTTTG+CGG | - | chr6_4:8268062-8268081 | Msa0974870:CDS | 45.0% | |
| !! | GAAGCCGACAAAAGCATTGT+TGG | - | chr6_4:8268105-8268124 | Msa0974870:CDS | 45.0% |
| GTGAAGGAAGTGATTCATGC+CGG | + | chr6_4:8268157-8268176 | None:intergenic | 45.0% | |
| CGAAACATCTCGAAGGGAAT+CGG | + | chr6_4:8268179-8268198 | None:intergenic | 45.0% | |
| CCTACATCGAAACATCTCGA+AGG | + | chr6_4:8268186-8268205 | None:intergenic | 45.0% | |
| CCTTCGAGATGTTTCGATGT+AGG | - | chr6_4:8268183-8268202 | Msa0974870:intron | 45.0% | |
| GTCATAAGCTCTCTGCAAGA+AGG | + | chr6_4:8268289-8268308 | None:intergenic | 45.0% | |
| GGTGGTGTTCCGTATATATG+CGG | + | chr6_4:8268458-8268477 | None:intergenic | 45.0% | |
| !!! | TGGGTTGTTTTTTGGTGTGG+TGG | + | chr6_4:8268476-8268495 | None:intergenic | 45.0% |
| TCGTTGTTCGAGGCCTTTAT+TGG | + | chr6_4:8268502-8268521 | None:intergenic | 45.0% | |
| AATAAAGGCCTCGAACAACG+AGG | - | chr6_4:8268501-8268520 | Msa0974870:intron | 45.0% | |
| !!! | TGGGTTTTTCGGTTTTGAGG+CGG | + | chr6_4:8268560-8268579 | None:intergenic | 45.0% |
| !! | TGTTTCGGTCTATTTCTGCC+TGG | + | chr6_4:8268629-8268648 | None:intergenic | 45.0% |
| AACACAACCTAACAGCACAG+TGG | - | chr6_4:8268651-8268670 | Msa0974870:intron | 45.0% | |
| !! | GCTGGATTTGTTGGAGAAGA+TGG | - | chr6_4:8268903-8268922 | Msa0974870:intron | 45.0% |
| GAAGATGGTCCAACACATTG+TGG | - | chr6_4:8268918-8268937 | Msa0974870:intron | 45.0% | |
| GGCATGTCTACCTAATATGG+TGG | - | chr6_4:8268962-8268981 | Msa0974870:intron | 45.0% | |
| ACAGCTAGGTCGATCGTTAA+TGG | + | chr6_4:8269042-8269061 | None:intergenic | 45.0% | |
| ! | CTAGCTGTTTCCGATTTCCA+CGG | - | chr6_4:8269054-8269073 | Msa0974870:CDS | 45.0% |
| ! | TAGCTGTTTCCGATTTCCAC+GGG | - | chr6_4:8269055-8269074 | Msa0974870:CDS | 45.0% |
| TTCCATTTGCCCGTGGAAAT+CGG | + | chr6_4:8269067-8269086 | None:intergenic | 45.0% | |
| !! | GAATAGAGGCATTCCTCTTG+AGG | - | chr6_4:8269109-8269128 | Msa0974870:CDS | 45.0% |
| AAAGGAAGAATGCTCACCGA+AGG | - | chr6_4:8269387-8269406 | Msa0974870:intron | 45.0% | |
| GCCTCAATATTGCAGCAACA+TGG | - | chr6_4:8269465-8269484 | Msa0974870:intron | 45.0% | |
| GCCATGTTGCTGCAATATTG+AGG | + | chr6_4:8269469-8269488 | None:intergenic | 45.0% | |
| CAACCTAGCGAAATCACATG+AGG | - | chr6_4:8269548-8269567 | Msa0974870:intron | 45.0% | |
| GTGGAAGAAGGATCAATAGG+AGG | - | chr6_4:8269582-8269601 | Msa0974870:intron | 45.0% | |
| TATTATCCAGTGGAGGCCAA+TGG | - | chr6_4:8269985-8270004 | Msa0974870:intron | 45.0% | |
| !! | ACAAAGAAAGGAGGCACTAG+AGG | - | chr6_4:8270111-8270130 | Msa0974870:CDS | 45.0% |
| !!! | TACATTATATATTTTTTTAA+AGG | - | chr6_4:8265352-8265371 | Msa0974870:CDS | 5.0% |
| !! | TTAATAATAATAACAATAAT+AGG | + | chr6_4:8265857-8265876 | None:intergenic | 5.0% |
| !!! | TTTTCAAAATATTAAAAATA+GGG | + | chr6_4:8267288-8267307 | None:intergenic | 5.0% |
| !!! | ATTTTCAAAATATTAAAAAT+AGG | + | chr6_4:8267289-8267308 | None:intergenic | 5.0% |
| !!! | ATTTTTAATATTTTGAAAAT+TGG | - | chr6_4:8267289-8267308 | Msa0974870:intron | 5.0% |
| ! | GCAGTTTGGCTCAAAAGGAC+AGG | + | chr6_4:8264754-8264773 | None:intergenic | 50.0% |
| TTGCAATCCCAGACTCAACC+AGG | - | chr6_4:8264846-8264865 | Msa0974870:CDS | 50.0% | |
| ATCCCAGACTCAACCAGGTT+AGG | - | chr6_4:8264851-8264870 | Msa0974870:CDS | 50.0% | |
| ATCAGTATCCGAAATGGGGG+AGG | - | chr6_4:8265112-8265131 | Msa0974870:intron | 50.0% | |
| ! | ACCGTATCCAAAAGGGGTGT+AGG | + | chr6_4:8265152-8265171 | None:intergenic | 50.0% |
| ACAACAATGTCAGCAGGGCT+AGG | - | chr6_4:8266089-8266108 | Msa0974870:intron | 50.0% | |
| TCCAAAAACAGGAATGGCGG+TGG | - | chr6_4:8266716-8266735 | Msa0974870:CDS | 50.0% | |
| CCAAAAACAGGAATGGCGGT+GGG | - | chr6_4:8266717-8266736 | Msa0974870:CDS | 50.0% | |
| GCGGTGGGTAGAGATCTAAA+GGG | - | chr6_4:8266732-8266751 | Msa0974870:CDS | 50.0% | |
| CGGTGGGTAGAGATCTAAAG+GGG | - | chr6_4:8266733-8266752 | Msa0974870:CDS | 50.0% | |
| GGTGGGTAGAGATCTAAAGG+GGG | - | chr6_4:8266734-8266753 | Msa0974870:CDS | 50.0% | |
| CATAGCACCATCACCGATGA+TGG | + | chr6_4:8266778-8266797 | None:intergenic | 50.0% | |
| !! | GTGATGGTGCTATGACTGCA+GGG | - | chr6_4:8266784-8266803 | Msa0974870:CDS | 50.0% |
| ! | ACAAGTATCGCTACCTACCG+CGG | - | chr6_4:8266878-8266897 | Msa0974870:intron | 50.0% |
| TATTGGACCATGAAGGTCCG+CGG | + | chr6_4:8266898-8266917 | None:intergenic | 50.0% | |
| ! | CTGGTGGTATTGGACCATGA+AGG | + | chr6_4:8266905-8266924 | None:intergenic | 50.0% |
| CATGGTCCAATACCACCAGT+TGG | - | chr6_4:8266906-8266925 | Msa0974870:intron | 50.0% | |
| ! | AGAGCACCAACTGGTGGTAT+TGG | + | chr6_4:8266915-8266934 | None:intergenic | 50.0% |
| ! | CATCTACTCAGAGCACCAAC+TGG | + | chr6_4:8266924-8266943 | None:intergenic | 50.0% |
| CTCTGAGTAGATGTCTCAGC+AGG | - | chr6_4:8266931-8266950 | Msa0974870:intron | 50.0% | |
| ! | CATGGCATGATTGGTGGTTC+TGG | - | chr6_4:8267620-8267639 | Msa0974870:intron | 50.0% |
| !! | CATGATGTGAGTACCGGTGT+GGG | + | chr6_4:8268057-8268076 | None:intergenic | 50.0% |
| GGAATACATGCTGCAATGGG+AGG | - | chr6_4:8268126-8268145 | Msa0974870:intron | 50.0% | |
| ATACATGCTGCAATGGGAGG+TGG | - | chr6_4:8268129-8268148 | Msa0974870:intron | 50.0% | |
| ATCTCGAAGGGAATCGGTGA+AGG | + | chr6_4:8268173-8268192 | None:intergenic | 50.0% | |
| ACCTTCACAAGCTAGACCTG+CGG | + | chr6_4:8268238-8268257 | None:intergenic | 50.0% | |
| CTTGCAGAGAGCTTATGACC+AGG | - | chr6_4:8268290-8268309 | Msa0974870:intron | 50.0% | |
| CAAGACGCACAAAGAACTCG+TGG | - | chr6_4:8268405-8268424 | Msa0974870:intron | 50.0% | |
| ACGCACAAAGAACTCGTGGT+AGG | - | chr6_4:8268409-8268428 | Msa0974870:intron | 50.0% | |
| CGCACAAAGAACTCGTGGTA+GGG | - | chr6_4:8268410-8268429 | Msa0974870:intron | 50.0% | |
| TATTCCAGCCTCGTTGTTCG+AGG | + | chr6_4:8268512-8268531 | None:intergenic | 50.0% | |
| !!! | TTTTGAGGCGGTGGTATGCT+TGG | + | chr6_4:8268548-8268567 | None:intergenic | 50.0% |
| !!! | GTTTTTCGGTTTTGAGGCGG+TGG | + | chr6_4:8268557-8268576 | None:intergenic | 50.0% |
| !! | CTGTGCAGCAGCCTGTTTTT+GGG | + | chr6_4:8268579-8268598 | None:intergenic | 50.0% |
| !!! | GCGTGCTGCTTCTGTTGTTT+TGG | + | chr6_4:8268602-8268621 | None:intergenic | 50.0% |
| AACAACAGAAGCAGCACGCA+AGG | - | chr6_4:8268603-8268622 | Msa0974870:intron | 50.0% | |
| TATGGGATCGGGTGCATTAG+TGG | + | chr6_4:8268762-8268781 | None:intergenic | 50.0% | |
| CATCATGCACCACCTTCGAA+TGG | + | chr6_4:8268842-8268861 | None:intergenic | 50.0% | |
| TTCGAAGGTGGTGCATGATG+TGG | - | chr6_4:8268842-8268861 | Msa0974870:CDS | 50.0% | |
| GGAGCCATCACCACCATATT+AGG | + | chr6_4:8268975-8268994 | None:intergenic | 50.0% | |
| CGTGGAAATCGGAAACAGCT+AGG | + | chr6_4:8269056-8269075 | None:intergenic | 50.0% | |
| TTCCGATTTCCACGGGCAAA+TGG | - | chr6_4:8269062-8269081 | Msa0974870:CDS | 50.0% | |
| TTTCCACGGGCAAATGGAAC+TGG | - | chr6_4:8269068-8269087 | Msa0974870:CDS | 50.0% | |
| ACTGGTGTAGAATTGCCACC+AGG | - | chr6_4:8269086-8269105 | Msa0974870:CDS | 50.0% | |
| CTGGTGTAGAATTGCCACCA+GGG | - | chr6_4:8269087-8269106 | Msa0974870:CDS | 50.0% | |
| GAATTGCCACCAGGGAATAG+AGG | - | chr6_4:8269095-8269114 | Msa0974870:CDS | 50.0% | |
| AGAGGAATGCCTCTATTCCC+TGG | + | chr6_4:8269107-8269126 | None:intergenic | 50.0% | |
| TGCTGTCCCAAAGCCCAAAA+GGG | + | chr6_4:8269424-8269443 | None:intergenic | 50.0% | |
| !! | GCAACATGGCTTGCTTGTCA+CGG | - | chr6_4:8269479-8269498 | Msa0974870:intron | 50.0% |
| TGCACGTTTCTGCAAGCCAT+TGG | - | chr6_4:8269509-8269528 | Msa0974870:intron | 50.0% | |
| CTAGGTTGCGAATGAGCGAA+CGG | + | chr6_4:8269536-8269555 | None:intergenic | 50.0% | |
| ! | GCCCTTGATGGTCTTCTTGA+TGG | - | chr6_4:8269633-8269652 | Msa0974870:intron | 50.0% |
| ATTGCTCAGCTGGTGATCCA+TGG | + | chr6_4:8270033-8270052 | None:intergenic | 50.0% | |
| GCAACAGCTAATTGCTCAGC+TGG | + | chr6_4:8270043-8270062 | None:intergenic | 50.0% | |
| GCTGAGCAATTAGCTGTTGC+TGG | - | chr6_4:8270043-8270062 | Msa0974870:CDS | 50.0% | |
| CTTGTGGGATGTTGGCCATC+AGG | - | chr6_4:8265820-8265839 | Msa0974870:CDS | 55.0% | |
| ! | CCCACCGCCATTCCTGTTTT+TGG | + | chr6_4:8266720-8266739 | None:intergenic | 55.0% |
| GGCGGTGGGTAGAGATCTAA+AGG | - | chr6_4:8266731-8266750 | Msa0974870:CDS | 55.0% | |
| GTGGTCACCATCATCGGTGA+TGG | - | chr6_4:8266768-8266787 | Msa0974870:CDS | 55.0% | |
| !! | GGTGATGGTGCTATGACTGC+AGG | - | chr6_4:8266783-8266802 | Msa0974870:CDS | 55.0% |
| ! | CTACTCAGAGCACCAACTGG+TGG | + | chr6_4:8266921-8266940 | None:intergenic | 55.0% |
| !! | GCATGATGTGAGTACCGGTG+TGG | + | chr6_4:8268058-8268077 | None:intergenic | 55.0% |
| CACGCTGTTACATTTGCCGC+AGG | - | chr6_4:8268219-8268238 | Msa0974870:intron | 55.0% | |
| ! | GCTGTGCAGCAGCCTGTTTT+TGG | + | chr6_4:8268580-8268599 | None:intergenic | 55.0% |
| ! | CTGCTTGCCACTGTGCTGTT+AGG | + | chr6_4:8268661-8268680 | None:intergenic | 55.0% |
| ACACCAGTTCCATTTGCCCG+TGG | + | chr6_4:8269074-8269093 | None:intergenic | 55.0% | |
| GGAATGCCTCTATTCCCTGG+TGG | + | chr6_4:8269104-8269123 | None:intergenic | 55.0% | |
| AAGGGCCACTCTTTCGCCTT+CGG | + | chr6_4:8269406-8269425 | None:intergenic | 55.0% | |
| ! | AGGCGAAAGAGTGGCCCTTT+TGG | - | chr6_4:8269407-8269426 | Msa0974870:intron | 55.0% |
| ! | GGCGAAAGAGTGGCCCTTTT+GGG | - | chr6_4:8269408-8269427 | Msa0974870:intron | 55.0% |
| ! | AGAGTGGCCCTTTTGGGCTT+TGG | - | chr6_4:8269414-8269433 | Msa0974870:intron | 55.0% |
| ! | GAGTGGCCCTTTTGGGCTTT+GGG | - | chr6_4:8269415-8269434 | Msa0974870:intron | 55.0% |
| CTGCTGTCCCAAAGCCCAAA+AGG | + | chr6_4:8269425-8269444 | None:intergenic | 55.0% | |
| !! | ACATGGCTTGCTTGTCACGG+TGG | - | chr6_4:8269482-8269501 | Msa0974870:intron | 55.0% |
| CGAATGAGCGAACGGTCCAA+TGG | + | chr6_4:8269528-8269547 | None:intergenic | 55.0% | |
| GCTCAGTTCATGGCCCTTGA+TGG | - | chr6_4:8269621-8269640 | Msa0974870:intron | 55.0% | |
| ! | GAAACACCATTGGCCTCCAC+TGG | + | chr6_4:8269994-8270013 | None:intergenic | 55.0% |
| !! | TGGTGCTATGACTGCAGGGC+AGG | - | chr6_4:8266788-8266807 | Msa0974870:CDS | 60.0% |
| GACTGCAGGGCAGGCATTTG+AGG | - | chr6_4:8266797-8266816 | Msa0974870:CDS | 60.0% | |
| CTACCTACCGCGGACCTTCA+TGG | - | chr6_4:8266888-8266907 | Msa0974870:intron | 60.0% | |
| CAAGACCAAGGCTCCCACAC+CGG | - | chr6_4:8268041-8268060 | Msa0974870:CDS | 60.0% | |
| GCTGCAATGGGAGGTGGAAC+CGG | - | chr6_4:8268135-8268154 | Msa0974870:intron | 60.0% | |
| ! | GCCGCAGGTCTAGCTTGTGA+AGG | - | chr6_4:8268234-8268253 | Msa0974870:intron | 60.0% |
| AAGGCCTCGAACAACGAGGC+TGG | - | chr6_4:8268505-8268524 | Msa0974870:intron | 60.0% | |
| GCTCACCGAAGGCGAAAGAG+TGG | - | chr6_4:8269398-8269417 | Msa0974870:intron | 60.0% | |
| !! | TGGCTTGCTTGTCACGGTGG+CGG | - | chr6_4:8269485-8269504 | Msa0974870:intron | 60.0% |
| CAGTGTCACCGCCGTCAATG+AGG | + | chr6_4:8269862-8269881 | None:intergenic | 60.0% | |
| GGACCATGAAGGTCCGCGGT+AGG | + | chr6_4:8266894-8266913 | None:intergenic | 65.0% | |
| !! | GAGTACCGGTGTGGGAGCCT+TGG | + | chr6_4:8268049-8268068 | None:intergenic | 65.0% |
| CAGAAGCAGCACGCAAGGCC+AGG | - | chr6_4:8268608-8268627 | Msa0974870:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 8264724 | 8270144 | 8264724 | ID=Msa0974870;Name=Msa0974870 |
| chr6_4 | mRNA | 8264724 | 8270144 | 8264724 | ID=Msa0974870-mRNA-1;Parent=Msa0974870;Name=Msa0974870-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.22|0|1|1|1|10|0|696 |
| chr6_4 | exon | 8270001 | 8270144 | 8270001 | ID=Msa0974870-mRNA-1:exon:3060;Parent=Msa0974870-mRNA-1 |
| chr6_4 | exon | 8269660 | 8269785 | 8269660 | ID=Msa0974870-mRNA-1:exon:3059;Parent=Msa0974870-mRNA-1 |
| chr6_4 | exon | 8269027 | 8269191 | 8269027 | ID=Msa0974870-mRNA-1:exon:3058;Parent=Msa0974870-mRNA-1 |
| chr6_4 | exon | 8268758 | 8268908 | 8268758 | ID=Msa0974870-mRNA-1:exon:3057;Parent=Msa0974870-mRNA-1 |
| chr6_4 | exon | 8267888 | 8268141 | 8267888 | ID=Msa0974870-mRNA-1:exon:3056;Parent=Msa0974870-mRNA-1 |
| chr6_4 | exon | 8267038 | 8267263 | 8267038 | ID=Msa0974870-mRNA-1:exon:3055;Parent=Msa0974870-mRNA-1 |
| chr6_4 | exon | 8266557 | 8266864 | 8266557 | ID=Msa0974870-mRNA-1:exon:3054;Parent=Msa0974870-mRNA-1 |
| chr6_4 | exon | 8265738 | 8266019 | 8265738 | ID=Msa0974870-mRNA-1:exon:3053;Parent=Msa0974870-mRNA-1 |
| chr6_4 | exon | 8265203 | 8265487 | 8265203 | ID=Msa0974870-mRNA-1:exon:3052;Parent=Msa0974870-mRNA-1 |
| chr6_4 | exon | 8264724 | 8264873 | 8264724 | ID=Msa0974870-mRNA-1:exon:3051;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8270001 | 8270144 | 8270001 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8269660 | 8269785 | 8269660 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8269027 | 8269191 | 8269027 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8268758 | 8268908 | 8268758 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8267888 | 8268141 | 8267888 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8267038 | 8267263 | 8267038 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8266557 | 8266864 | 8266557 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8265738 | 8266019 | 8265738 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8265203 | 8265487 | 8265203 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| chr6_4 | CDS | 8264724 | 8264873 | 8264724 | ID=Msa0974870-mRNA-1:cds;Parent=Msa0974870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
