Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289430 | KEH22406.1 | 70.088 | 341 | 54 | 3 | 56 | 396 | 15 | 307 | 1.46e-157 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289430 | sp|Q9SZL8|FRS5_ARATH | 34.025 | 241 | 155 | 4 | 163 | 401 | 77 | 315 | 2.15e-27 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289430 | A0A072TZ24 | 70.088 | 341 | 54 | 3 | 56 | 396 | 15 | 307 | 6.96e-158 | 457 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1289430 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013750 | Msa1289430 | 0.803001 | 4.292861e-49 | -8.615850e-47 |
| Msa0014330 | Msa1289430 | 0.803397 | 3.554997e-49 | -8.615850e-47 |
| Msa0015750 | Msa1289430 | 0.824880 | 6.351680e-54 | -8.615850e-47 |
| Msa0016570 | Msa1289430 | 0.848236 | 6.969651e-60 | -8.615850e-47 |
| Msa0016580 | Msa1289430 | 0.827475 | 1.533165e-54 | -8.615850e-47 |
| Msa0102070 | Msa1289430 | 0.862369 | 5.322161e-64 | -8.615850e-47 |
| Msa0110270 | Msa1289430 | 0.824869 | 6.389715e-54 | -8.615850e-47 |
| Msa0111510 | Msa1289430 | 0.811044 | 8.522337e-51 | -8.615850e-47 |
| Msa0604350 | Msa1289430 | 0.824919 | 6.217616e-54 | -8.615850e-47 |
| Msa0636170 | Msa1289430 | 0.852872 | 3.471169e-61 | -8.615850e-47 |
| Msa0639610 | Msa1289430 | 0.821592 | 3.720029e-53 | -8.615850e-47 |
| Msa0650630 | Msa1289430 | 0.800354 | 1.499178e-48 | -8.615850e-47 |
| Msa0678930 | Msa1289430 | 0.817942 | 2.537851e-52 | -8.615850e-47 |
| Msa0694370 | Msa1289430 | 0.817042 | 4.048548e-52 | -8.615850e-47 |
| Msa0725850 | Msa1289430 | 0.845644 | 3.570953e-59 | -8.615850e-47 |
| Msa0726140 | Msa1289430 | 0.869766 | 2.420722e-66 | -8.615850e-47 |
| Msa0729800 | Msa1289430 | 0.850938 | 1.228187e-60 | -8.615850e-47 |
| Msa0731560 | Msa1289430 | 0.816603 | 5.077872e-52 | -8.615850e-47 |
| Msa0733290 | Msa1289430 | 0.857031 | 2.153213e-62 | -8.615850e-47 |
| Msa0741990 | Msa1289430 | 0.829069 | 6.324504e-55 | -8.615850e-47 |
| Msa0743810 | Msa1289430 | 0.895776 | 6.947308e-76 | -8.615850e-47 |
| Msa0745060 | Msa1289430 | 0.868151 | 8.076404e-66 | -8.615850e-47 |
| Msa0748970 | Msa1289430 | 0.808565 | 2.910378e-50 | -8.615850e-47 |
| Msa0767720 | Msa1289430 | 0.851532 | 8.347203e-61 | -8.615850e-47 |
| Msa0768290 | Msa1289430 | 0.841168 | 5.595894e-58 | -8.615850e-47 |
| Msa0768370 | Msa1289430 | 0.841439 | 4.749077e-58 | -8.615850e-47 |
| Msa0783160 | Msa1289430 | 0.890961 | 6.133863e-74 | -8.615850e-47 |
| Msa0784290 | Msa1289430 | 0.822171 | 2.732312e-53 | -8.615850e-47 |
| Msa0784300 | Msa1289430 | 0.813829 | 2.099397e-51 | -8.615850e-47 |
| Msa0787600 | Msa1289430 | 0.853002 | 3.185848e-61 | -8.615850e-47 |
| Msa0789250 | Msa1289430 | 0.801399 | 9.171263e-49 | -8.615850e-47 |
| Msa0808010 | Msa1289430 | 0.857990 | 1.119835e-62 | -8.615850e-47 |
| Msa0808020 | Msa1289430 | 0.851465 | 8.722974e-61 | -8.615850e-47 |
| Msa0811080 | Msa1289430 | 0.827006 | 1.985778e-54 | -8.615850e-47 |
| Msa0811270 | Msa1289430 | 0.811044 | 8.522019e-51 | -8.615850e-47 |
| Msa0824600 | Msa1289430 | 0.814323 | 1.633452e-51 | -8.615850e-47 |
| Msa0825860 | Msa1289430 | 0.875551 | 2.818484e-68 | -8.615850e-47 |
| Msa0833290 | Msa1289430 | 0.825808 | 3.830949e-54 | -8.615850e-47 |
| Msa0833300 | Msa1289430 | 0.807457 | 5.007827e-50 | -8.615850e-47 |
| Msa0123810 | Msa1289430 | 0.804629 | 1.971067e-49 | -8.615850e-47 |
| Msa0131770 | Msa1289430 | 0.814177 | 1.759416e-51 | -8.615850e-47 |
| Msa0142220 | Msa1289430 | 0.852806 | 3.623784e-61 | -8.615850e-47 |
| Msa0145750 | Msa1289430 | 0.851569 | 8.148640e-61 | -8.615850e-47 |
| Msa0153910 | Msa1289430 | 0.825066 | 5.738991e-54 | -8.615850e-47 |
| Msa0200000 | Msa1289430 | 0.847584 | 1.054299e-59 | -8.615850e-47 |
| Msa0214890 | Msa1289430 | 0.804706 | 1.899380e-49 | -8.615850e-47 |
| Msa0227480 | Msa1289430 | 0.863311 | 2.724696e-64 | -8.615850e-47 |
| Msa0231000 | Msa1289430 | 0.813855 | 2.071814e-51 | -8.615850e-47 |
| Msa0232850 | Msa1289430 | 0.848860 | 4.682565e-60 | -8.615850e-47 |
| Msa0235140 | Msa1289430 | 0.811510 | 6.751788e-51 | -8.615850e-47 |
| Msa1230430 | Msa1289430 | 0.800513 | 1.391507e-48 | -8.615850e-47 |
| Msa1246880 | Msa1289430 | 0.825980 | 3.486166e-54 | -8.615850e-47 |
| Msa1248300 | Msa1289430 | 0.850073 | 2.149534e-60 | -8.615850e-47 |
| Msa1248310 | Msa1289430 | 0.891587 | 3.467966e-74 | -8.615850e-47 |
| Msa1248370 | Msa1289430 | 0.878380 | 2.943393e-69 | -8.615850e-47 |
| Msa1260100 | Msa1289430 | 0.815088 | 1.105935e-51 | -8.615850e-47 |
| Msa1269670 | Msa1289430 | 0.859971 | 2.858810e-63 | -8.615850e-47 |
| Msa1270230 | Msa1289430 | 0.881949 | 1.567905e-70 | -8.615850e-47 |
| Msa1270240 | Msa1289430 | 0.863061 | 3.255910e-64 | -8.615850e-47 |
| Msa1270270 | Msa1289430 | 0.850236 | 1.934694e-60 | -8.615850e-47 |
| Msa1283330 | Msa1289430 | 0.870993 | 9.586117e-67 | -8.615850e-47 |
| Msa1285930 | Msa1289430 | 0.893990 | 3.753273e-75 | -8.615850e-47 |
| Msa1287800 | Msa1289430 | 0.880277 | 6.268459e-70 | -8.615850e-47 |
| Msa1287810 | Msa1289430 | 0.894944 | 1.530954e-75 | -8.615850e-47 |
| Msa1287820 | Msa1289430 | 0.820955 | 5.217665e-53 | -8.615850e-47 |
| Msa1287830 | Msa1289430 | 0.830991 | 2.149559e-55 | -8.615850e-47 |
| Msa1289420 | Msa1289430 | 0.889415 | 2.472451e-73 | -8.615850e-47 |
| Msa1289430 | Msa1297210 | 0.810834 | 9.466761e-51 | -8.615850e-47 |
| Msa1289430 | Msa1305480 | 0.817208 | 3.715104e-52 | -8.615850e-47 |
| Msa1289430 | Msa1307890 | 0.875718 | 2.470899e-68 | -8.615850e-47 |
| Msa1289430 | Msa1310120 | 0.826451 | 2.692993e-54 | -8.615850e-47 |
| Msa1289430 | Msa1320300 | 0.863918 | 1.765637e-64 | -8.615850e-47 |
| Msa1289430 | Msa1321560 | 0.824942 | 6.140364e-54 | -8.615850e-47 |
| Msa1289430 | Msa1340590 | 0.855118 | 7.817328e-62 | -8.615850e-47 |
| Msa1289430 | Msa1342200 | 0.818901 | 1.539169e-52 | -8.615850e-47 |
| Msa1289430 | Msa1344520 | 0.807256 | 5.523464e-50 | -8.615850e-47 |
| Msa1289430 | Msa1366810 | 0.808431 | 3.107070e-50 | -8.615850e-47 |
| Msa1289430 | Msa1369430 | 0.846310 | 2.353834e-59 | -8.615850e-47 |
| Msa1289430 | Msa1382690 | 0.806488 | 8.030421e-50 | -8.615850e-47 |
| Msa1289430 | Msa1397580 | 0.845253 | 4.558280e-59 | -8.615850e-47 |
| Msa1289430 | Msa1402790 | 0.805007 | 1.643205e-49 | -8.615850e-47 |
| Msa1289430 | Msa1404000 | 0.870113 | 1.865364e-66 | -8.615850e-47 |
| Msa1289430 | Msa1408780 | 0.824318 | 8.612620e-54 | -8.615850e-47 |
| Msa1289430 | Msa1415310 | 0.872714 | 2.571117e-67 | -8.615850e-47 |
| Msa1289430 | Msa1422180 | 0.849430 | 3.250791e-60 | -8.615850e-47 |
| Msa1289430 | Msa1433120 | 0.844329 | 8.085252e-59 | -8.615850e-47 |
| Msa0365500 | Msa1289430 | 0.844454 | 7.483480e-59 | -8.615850e-47 |
| Msa0384800 | Msa1289430 | 0.855539 | 5.896725e-62 | -8.615850e-47 |
| Msa0384890 | Msa1289430 | 0.826854 | 2.159015e-54 | -8.615850e-47 |
| Msa0394970 | Msa1289430 | 0.824944 | 6.133236e-54 | -8.615850e-47 |
| Msa0406120 | Msa1289430 | 0.836029 | 1.188450e-56 | -8.615850e-47 |
| Msa0407750 | Msa1289430 | 0.818073 | 2.370865e-52 | -8.615850e-47 |
| Msa0414410 | Msa1289430 | 0.875661 | 2.584910e-68 | -8.615850e-47 |
| Msa0414420 | Msa1289430 | 0.881399 | 2.479549e-70 | -8.615850e-47 |
| Msa0428000 | Msa1289430 | 0.800315 | 1.526720e-48 | -8.615850e-47 |
| Msa0435230 | Msa1289430 | 0.811264 | 7.638309e-51 | -8.615850e-47 |
| Msa0436780 | Msa1289430 | 0.830664 | 2.586111e-55 | -8.615850e-47 |
| Msa0436800 | Msa1289430 | 0.813742 | 2.194564e-51 | -8.615850e-47 |
| Msa0438620 | Msa1289430 | 0.839537 | 1.493460e-57 | -8.615850e-47 |
| Msa0450000 | Msa1289430 | 0.853818 | 1.857614e-61 | -8.615850e-47 |
| Msa0450570 | Msa1289430 | 0.800953 | 1.131406e-48 | -8.615850e-47 |
| Msa0451730 | Msa1289430 | 0.801939 | 7.106930e-49 | -8.615850e-47 |
| Msa0452900 | Msa1289430 | 0.892647 | 1.308800e-74 | -8.615850e-47 |
| Msa0453120 | Msa1289430 | 0.830104 | 3.543468e-55 | -8.615850e-47 |
| Msa0454370 | Msa1289430 | 0.826123 | 3.223620e-54 | -8.615850e-47 |
| Msa0454910 | Msa1289430 | 0.838618 | 2.583543e-57 | -8.615850e-47 |
| Msa0459160 | Msa1289430 | 0.831481 | 1.628758e-55 | -8.615850e-47 |
| Msa0459170 | Msa1289430 | 0.837890 | 3.978615e-57 | -8.615850e-47 |
| Msa0479340 | Msa1289430 | 0.821327 | 4.283870e-53 | -8.615850e-47 |
| Msa0482620 | Msa1289430 | 0.803780 | 2.960251e-49 | -8.615850e-47 |
| Msa0979850 | Msa1289430 | 0.803230 | 3.849535e-49 | -8.615850e-47 |
| Msa0981270 | Msa1289430 | 0.800196 | 1.614121e-48 | -8.615850e-47 |
| Msa0981370 | Msa1289430 | 0.830215 | 3.328456e-55 | -8.615850e-47 |
| Msa0989060 | Msa1289430 | 0.861480 | 9.962802e-64 | -8.615850e-47 |
| Msa0991820 | Msa1289430 | 0.811265 | 7.634565e-51 | -8.615850e-47 |
| Msa0998690 | Msa1289430 | 0.814773 | 1.299117e-51 | -8.615850e-47 |
| Msa1016280 | Msa1289430 | 0.887291 | 1.623594e-72 | -8.615850e-47 |
| Msa1018520 | Msa1289430 | 0.837249 | 5.810705e-57 | -8.615850e-47 |
| Msa1023050 | Msa1289430 | 0.801434 | 9.019250e-49 | -8.615850e-47 |
| Msa1024240 | Msa1289430 | 0.839123 | 1.912267e-57 | -8.615850e-47 |
| Msa1025360 | Msa1289430 | 0.896277 | 4.304990e-76 | -8.615850e-47 |
| Msa1025370 | Msa1289430 | 0.897660 | 1.133672e-76 | -8.615850e-47 |
| Msa1028230 | Msa1289430 | 0.802862 | 4.586365e-49 | -8.615850e-47 |
| Msa1030060 | Msa1289430 | 0.802579 | 5.246221e-49 | -8.615850e-47 |
| Msa1044830 | Msa1289430 | 0.895586 | 8.322416e-76 | -8.615850e-47 |
| Msa1044840 | Msa1289430 | 0.897430 | 1.417442e-76 | -8.615850e-47 |
| Msa1060840 | Msa1289430 | 0.834550 | 2.809855e-56 | -8.615850e-47 |
| Msa1068420 | Msa1289430 | 0.835063 | 2.086917e-56 | -8.615850e-47 |
| Msa1085740 | Msa1289430 | 0.812457 | 4.198258e-51 | -8.615850e-47 |
| Msa1092990 | Msa1289430 | 0.872806 | 2.395616e-67 | -8.615850e-47 |
| Msa1100980 | Msa1289430 | 0.861969 | 7.061599e-64 | -8.615850e-47 |
| Msa0247260 | Msa1289430 | 0.824400 | 8.239747e-54 | -8.615850e-47 |
| Msa0267000 | Msa1289430 | 0.886980 | 2.132169e-72 | -8.615850e-47 |
| Msa0267010 | Msa1289430 | 0.892409 | 1.630650e-74 | -8.615850e-47 |
| Msa0270520 | Msa1289430 | 0.831594 | 1.528137e-55 | -8.615850e-47 |
| Msa0273100 | Msa1289430 | 0.803019 | 4.256756e-49 | -8.615850e-47 |
| Msa0285810 | Msa1289430 | 0.815993 | 6.953514e-52 | -8.615850e-47 |
| Msa0290870 | Msa1289430 | 0.815465 | 9.115805e-52 | -8.615850e-47 |
| Msa0304170 | Msa1289430 | 0.838995 | 2.064189e-57 | -8.615850e-47 |
| Msa0306460 | Msa1289430 | 0.816749 | 4.709855e-52 | -8.615850e-47 |
| Msa0311750 | Msa1289430 | 0.808649 | 2.792391e-50 | -8.615850e-47 |
| Msa0313760 | Msa1289430 | 0.807085 | 6.004809e-50 | -8.615850e-47 |
| Msa0337900 | Msa1289430 | 0.812054 | 5.141682e-51 | -8.615850e-47 |
| Msa0342240 | Msa1289430 | 0.874611 | 5.899357e-68 | -8.615850e-47 |
| Msa0342750 | Msa1289430 | 0.806370 | 8.501704e-50 | -8.615850e-47 |
| Msa0360510 | Msa1289430 | 0.847357 | 1.217487e-59 | -8.615850e-47 |
| Msa0363300 | Msa1289430 | 0.806285 | 8.860224e-50 | -8.615850e-47 |
| Msa1109440 | Msa1289430 | 0.839163 | 1.867191e-57 | -8.615850e-47 |
| Msa1112300 | Msa1289430 | 0.820759 | 5.786868e-53 | -8.615850e-47 |
| Msa1114030 | Msa1289430 | 0.813175 | 2.923490e-51 | -8.615850e-47 |
| Msa1121200 | Msa1289430 | 0.878684 | 2.300379e-69 | -8.615850e-47 |
| Msa1121480 | Msa1289430 | 0.835235 | 1.887881e-56 | -8.615850e-47 |
| Msa1121490 | Msa1289430 | 0.823468 | 1.362959e-53 | -8.615850e-47 |
| Msa1135740 | Msa1289430 | 0.841885 | 3.622174e-58 | -8.615850e-47 |
| Msa1146100 | Msa1289430 | 0.821077 | 4.889721e-53 | -8.615850e-47 |
| Msa1146110 | Msa1289430 | 0.865848 | 4.384351e-65 | -8.615850e-47 |
| Msa1149360 | Msa1289430 | 0.804124 | 2.511623e-49 | -8.615850e-47 |
| Msa1150370 | Msa1289430 | 0.869946 | 2.113988e-66 | -8.615850e-47 |
| Msa1173920 | Msa1289430 | 0.825518 | 4.486702e-54 | -8.615850e-47 |
| Msa1178340 | Msa1289430 | 0.806812 | 6.859869e-50 | -8.615850e-47 |
| Msa1182090 | Msa1289430 | 0.801138 | 1.037220e-48 | -8.615850e-47 |
| Msa1184420 | Msa1289430 | 0.800286 | 1.547693e-48 | -8.615850e-47 |
| Msa1187940 | Msa1289430 | 0.863583 | 2.245181e-64 | -8.615850e-47 |
| Msa1187950 | Msa1289430 | 0.833342 | 5.635268e-56 | -8.615850e-47 |
| Msa1192640 | Msa1289430 | 0.873855 | 1.063439e-67 | -8.615850e-47 |
| Msa0485030 | Msa1289430 | 0.824673 | 7.105227e-54 | -8.615850e-47 |
| Msa0491590 | Msa1289430 | 0.866674 | 2.398439e-65 | -8.615850e-47 |
| Msa0502340 | Msa1289430 | 0.801979 | 6.973927e-49 | -8.615850e-47 |
| Msa0502760 | Msa1289430 | 0.822443 | 2.362188e-53 | -8.615850e-47 |
| Msa0506190 | Msa1289430 | 0.806351 | 8.581764e-50 | -8.615850e-47 |
| Msa0506270 | Msa1289430 | 0.821924 | 3.117736e-53 | -8.615850e-47 |
| Msa0534540 | Msa1289430 | 0.822522 | 2.265187e-53 | -8.615850e-47 |
| Msa0564890 | Msa1289430 | 0.862673 | 4.291554e-64 | -8.615850e-47 |
| Msa0596150 | Msa1289430 | 0.808370 | 3.201766e-50 | -8.615850e-47 |
| Msa0844490 | Msa1289430 | 0.807211 | 5.647979e-50 | -8.615850e-47 |
| Msa0845930 | Msa1289430 | 0.819815 | 9.526775e-53 | -8.615850e-47 |
| Msa0846210 | Msa1289430 | 0.818271 | 2.138300e-52 | -8.615850e-47 |
| Msa0846330 | Msa1289430 | 0.864835 | 9.133661e-65 | -8.615850e-47 |
| Msa0846350 | Msa1289430 | 0.863373 | 2.607384e-64 | -8.615850e-47 |
| Msa0848960 | Msa1289430 | 0.833924 | 4.033284e-56 | -8.615850e-47 |
| Msa0858980 | Msa1289430 | 0.862757 | 4.041320e-64 | -8.615850e-47 |
| Msa0864070 | Msa1289430 | 0.802867 | 4.575020e-49 | -8.615850e-47 |
| Msa0865320 | Msa1289430 | 0.860653 | 1.777480e-63 | -8.615850e-47 |
| Msa0872230 | Msa1289430 | 0.804966 | 1.676115e-49 | -8.615850e-47 |
| Msa0885280 | Msa1289430 | 0.807730 | 4.383262e-50 | -8.615850e-47 |
| Msa0885290 | Msa1289430 | 0.847298 | 1.263579e-59 | -8.615850e-47 |
| Msa0888370 | Msa1289430 | 0.845859 | 3.122850e-59 | -8.615850e-47 |
| Msa0888420 | Msa1289430 | 0.830026 | 3.701317e-55 | -8.615850e-47 |
| Msa0896080 | Msa1289430 | 0.816736 | 4.741430e-52 | -8.615850e-47 |
| Msa0899430 | Msa1289430 | 0.806955 | 6.397840e-50 | -8.615850e-47 |
| Msa0899450 | Msa1289430 | 0.802520 | 5.396683e-49 | -8.615850e-47 |
| Msa0907260 | Msa1289430 | 0.807790 | 4.254949e-50 | -8.615850e-47 |
| Msa0914760 | Msa1289430 | 0.810451 | 1.144965e-50 | -8.615850e-47 |
| Msa0924050 | Msa1289430 | 0.804981 | 1.663951e-49 | -8.615850e-47 |
| Msa0952720 | Msa1289430 | 0.813826 | 2.102216e-51 | -8.615850e-47 |
| Msa0954910 | Msa1289430 | 0.800525 | 1.383324e-48 | -8.615850e-47 |
| Msa0956270 | Msa1289430 | 0.820320 | 7.300838e-53 | -8.615850e-47 |
| Msa0957680 | Msa1289430 | 0.824114 | 9.616808e-54 | -8.615850e-47 |
| Msa0967280 | Msa1289430 | 0.829120 | 6.149274e-55 | -8.615850e-47 |
| Msa0969260 | Msa1289430 | 0.805596 | 1.236984e-49 | -8.615850e-47 |
| Msa0974870 | Msa1289430 | 0.802416 | 5.667983e-49 | -8.615850e-47 |
| Msa0979410 | Msa1289430 | 0.801105 | 1.053405e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289430 | MtrunA17_Chr2g0287651 | 67.045 | 264 | 87 | 0 | 142 | 405 | 58 | 321 | 2.31e-126 | 385 |
| Msa1289430 | MtrunA17_Chr1g0203051 | 35.048 | 311 | 192 | 5 | 100 | 407 | 22 | 325 | 7.62e-50 | 178 |
| Msa1289430 | MtrunA17_Chr5g0448761 | 34.836 | 244 | 153 | 5 | 163 | 401 | 64 | 306 | 2.81e-29 | 120 |
| Msa1289430 | MtrunA17_Chr8g0363841 | 31.760 | 233 | 151 | 4 | 169 | 398 | 27 | 254 | 4.95e-23 | 101 |
| Msa1289430 | MtrunA17_Chr1g0202341 | 29.615 | 260 | 156 | 8 | 158 | 405 | 50 | 294 | 4.52e-22 | 98.6 |
| Msa1289430 | MtrunA17_Chr3g0082121 | 29.796 | 245 | 154 | 5 | 161 | 401 | 45 | 275 | 8.41e-21 | 94.7 |
| Msa1289430 | MtrunA17_Chr8g0389811 | 33.523 | 176 | 107 | 3 | 97 | 262 | 12 | 187 | 2.92e-20 | 88.6 |
| Msa1289430 | MtrunA17_Chr2g0276841 | 28.682 | 258 | 145 | 7 | 165 | 401 | 76 | 315 | 3.24e-20 | 93.2 |
| Msa1289430 | MtrunA17_Chr1g0198761 | 27.692 | 260 | 148 | 8 | 169 | 404 | 57 | 300 | 1.30e-19 | 91.3 |
| Msa1289430 | MtrunA17_Chr5g0431001 | 29.218 | 243 | 160 | 6 | 171 | 403 | 73 | 313 | 1.37e-19 | 90.9 |
| Msa1289430 | MtrunA17_Chr7g0258861 | 26.908 | 249 | 180 | 2 | 163 | 411 | 14 | 260 | 2.97e-19 | 87.8 |
| Msa1289430 | MtrunA17_Chr2g0324011 | 28.689 | 244 | 169 | 3 | 163 | 405 | 14 | 253 | 4.75e-19 | 89.4 |
| Msa1289430 | MtrunA17_Chr3g0080351 | 26.641 | 259 | 153 | 6 | 158 | 404 | 75 | 308 | 1.61e-18 | 88.2 |
| Msa1289430 | MtrunA17_Chr5g0441581 | 27.160 | 243 | 161 | 5 | 163 | 404 | 36 | 263 | 1.79e-18 | 87.8 |
| Msa1289430 | MtrunA17_Chr6g0458391 | 30.620 | 258 | 149 | 9 | 150 | 401 | 214 | 447 | 1.95e-18 | 87.8 |
| Msa1289430 | MtrunA17_Chr1g0207551 | 27.686 | 242 | 166 | 5 | 163 | 402 | 38 | 272 | 2.38e-17 | 84.3 |
| Msa1289430 | MtrunA17_Chr2g0290391 | 26.295 | 251 | 172 | 4 | 163 | 401 | 55 | 304 | 6.53e-17 | 82.8 |
| Msa1289430 | MtrunA17_Chr1g0203721 | 27.559 | 254 | 175 | 6 | 152 | 402 | 59 | 306 | 3.79e-15 | 77.8 |
| Msa1289430 | MtrunA17_Chr2g0296781 | 29.167 | 240 | 161 | 5 | 163 | 401 | 1 | 232 | 4.80e-15 | 77.4 |
| Msa1289430 | MtrunA17_Chr1g0171741 | 26.623 | 154 | 108 | 2 | 137 | 290 | 115 | 263 | 4.87e-15 | 74.7 |
| Msa1289430 | MtrunA17_Chr2g0294841 | 26.174 | 298 | 201 | 7 | 121 | 403 | 2 | 295 | 6.36e-15 | 77.0 |
| Msa1289430 | MtrunA17_Chr6g0473421 | 42.500 | 80 | 46 | 0 | 155 | 234 | 51 | 130 | 2.62e-14 | 70.1 |
| Msa1289430 | MtrunA17_Chr2g0331371 | 30.233 | 172 | 107 | 1 | 105 | 276 | 14 | 172 | 7.73e-14 | 70.1 |
| Msa1289430 | MtrunA17_Chr2g0291591 | 27.306 | 271 | 161 | 10 | 146 | 402 | 52 | 300 | 8.28e-14 | 73.2 |
| Msa1289430 | MtrunA17_Chr2g0287061 | 27.092 | 251 | 119 | 9 | 164 | 401 | 188 | 387 | 2.55e-13 | 72.0 |
| Msa1289430 | MtrunA17_Chr2g0329361 | 36.842 | 114 | 69 | 3 | 156 | 267 | 58 | 170 | 1.73e-12 | 67.0 |
| Msa1289430 | MtrunA17_Chr2g0291581 | 27.309 | 249 | 154 | 8 | 161 | 404 | 73 | 299 | 1.37e-11 | 66.2 |
| Msa1289430 | MtrunA17_Chr8g0340801 | 33.019 | 106 | 69 | 1 | 273 | 378 | 4 | 107 | 8.43e-11 | 58.9 |
| Msa1289430 | MtrunA17_Chr7g0238821 | 33.036 | 112 | 70 | 3 | 163 | 273 | 1 | 108 | 9.99e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289430 | AT4G38180.1 | 34.025 | 241 | 155 | 4 | 163 | 401 | 77 | 315 | 2.18e-28 | 118 |
| Msa1289430 | AT4G15090.1 | 29.508 | 244 | 166 | 5 | 163 | 404 | 55 | 294 | 4.98e-23 | 102 |
| Msa1289430 | AT4G15090.5 | 29.508 | 244 | 166 | 5 | 163 | 404 | 55 | 294 | 4.98e-23 | 102 |
| Msa1289430 | AT4G15090.3 | 29.508 | 244 | 166 | 5 | 163 | 404 | 55 | 294 | 4.98e-23 | 102 |
| Msa1289430 | AT4G15090.2 | 29.508 | 244 | 166 | 5 | 163 | 404 | 55 | 294 | 4.98e-23 | 102 |
| Msa1289430 | AT4G15090.4 | 29.508 | 244 | 166 | 5 | 163 | 404 | 55 | 294 | 4.98e-23 | 102 |
| Msa1289430 | AT3G22170.2 | 27.900 | 319 | 178 | 9 | 113 | 404 | 10 | 303 | 7.94e-22 | 98.6 |
| Msa1289430 | AT3G22170.1 | 27.900 | 319 | 178 | 9 | 113 | 404 | 10 | 303 | 7.94e-22 | 98.6 |
| Msa1289430 | AT1G10240.2 | 29.710 | 276 | 177 | 7 | 141 | 403 | 24 | 295 | 1.02e-20 | 95.1 |
| Msa1289430 | AT1G10240.1 | 29.710 | 276 | 177 | 7 | 141 | 403 | 24 | 295 | 1.02e-20 | 95.1 |
| Msa1289430 | AT5G28530.3 | 26.506 | 249 | 170 | 4 | 165 | 401 | 61 | 308 | 4.90e-16 | 80.9 |
| Msa1289430 | AT5G28530.2 | 26.506 | 249 | 170 | 4 | 165 | 401 | 61 | 308 | 4.90e-16 | 80.9 |
| Msa1289430 | AT5G28530.1 | 26.506 | 249 | 170 | 4 | 165 | 401 | 61 | 308 | 5.15e-16 | 80.5 |
| Msa1289430 | AT1G76320.2 | 26.122 | 245 | 164 | 6 | 163 | 404 | 1 | 231 | 2.13e-14 | 75.5 |
| Msa1289430 | AT1G76320.1 | 26.122 | 245 | 164 | 6 | 163 | 404 | 1 | 231 | 2.15e-14 | 75.5 |
| Msa1289430 | AT1G76320.4 | 26.122 | 245 | 164 | 6 | 163 | 404 | 1 | 231 | 2.15e-14 | 75.5 |
| Msa1289430 | AT1G76320.3 | 26.122 | 245 | 164 | 6 | 163 | 404 | 1 | 231 | 5.46e-14 | 74.3 |
| Msa1289430 | AT3G07500.1 | 36.232 | 138 | 78 | 5 | 132 | 266 | 8 | 138 | 1.59e-11 | 63.9 |
Find 76 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGACTTTACGGATTT+TGG | 0.048057 | 8_3:-43298413 | Msa1289430:CDS |
| GACGTTTGAAATGTCTATTT+TGG | 0.217062 | 8_3:-43297341 | Msa1289430:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 8_3:-43297553 | Msa1289430:CDS |
| TGCATTTACACCTTGTTTAT+CGG | 0.260369 | 8_3:-43297626 | Msa1289430:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 8_3:-43297712 | Msa1289430:CDS |
| AGATCAGATTATTTCTGTTT+TGG | 0.278600 | 8_3:-43297303 | Msa1289430:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 8_3:-43298188 | Msa1289430:CDS |
| ATTAACTGCTGAAGGAATAA+TGG | 0.327415 | 8_3:-43297967 | Msa1289430:CDS |
| ATGTTAAGAAGAGTGATATT+AGG | 0.350101 | 8_3:-43297875 | Msa1289430:CDS |
| GTAGAACCGTAATCATATTT+CGG | 0.389914 | 8_3:+43298386 | None:intergenic |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 8_3:-43297552 | Msa1289430:CDS |
| TGCTGAAGGAATAATGGAAA+TGG | 0.417359 | 8_3:-43297961 | Msa1289430:CDS |
| TGTAAATGCACAACACTAGA+TGG | 0.434308 | 8_3:+43297639 | None:intergenic |
| GGTTCACCGAAATATGATTA+CGG | 0.436818 | 8_3:-43298392 | Msa1289430:CDS |
| GATTATAGTGTTGGTGATAA+AGG | 0.444719 | 8_3:-43298164 | Msa1289430:CDS |
| TTTAAGTACTGTAAGTGTAA+AGG | 0.451106 | 8_3:-43297903 | Msa1289430:CDS |
| GACGATAGTTCTGATGAAAC+TGG | 0.457084 | 8_3:-43298221 | Msa1289430:CDS |
| AAGGGTGGATATCCTGGTGT+TGG | 0.458467 | 8_3:-43297513 | Msa1289430:CDS |
| GCTCAGAAGGGTGGATATCC+TGG | 0.461189 | 8_3:-43297519 | Msa1289430:CDS |
| AAACCTATCCGATGATTGTT+GGG | 0.461967 | 8_3:-43298343 | Msa1289430:CDS |
| TAGTGAACACGAAGCCTAGC+TGG | 0.465685 | 8_3:+43297726 | None:intergenic |
| GCAGATAAAGCACAAATTGA+TGG | 0.466709 | 8_3:-43297591 | Msa1289430:CDS |
| CACTAGATGGAGTAAGTTCA+TGG | 0.468010 | 8_3:+43297652 | None:intergenic |
| TGTTCTGGTGATTATAGTGT+TGG | 0.469535 | 8_3:-43298173 | Msa1289430:CDS |
| GAGAGAAGAAGCATTTATCA+AGG | 0.474767 | 8_3:-43297794 | Msa1289430:CDS |
| AGGGTGGATATCCTGGTGTT+GGG | 0.476260 | 8_3:-43297512 | Msa1289430:CDS |
| CAATATTCTACCACTGATGA+TGG | 0.484309 | 8_3:-43297363 | Msa1289430:CDS |
| AATAATGGAAATGGAATTTG+CGG | 0.487093 | 8_3:-43297952 | Msa1289430:CDS |
| GGGATACATTGTGGCTCAGA+AGG | 0.492920 | 8_3:-43297532 | Msa1289430:CDS |
| GAAACCTATCCGATGATTGT+TGG | 0.493181 | 8_3:-43298344 | Msa1289430:CDS |
| AATGTAGATGATAGTTCTGA+TGG | 0.493462 | 8_3:-43298287 | Msa1289430:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 8_3:-43297823 | Msa1289430:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 8_3:-43298003 | Msa1289430:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 8_3:-43298014 | Msa1289430:CDS |
| AGTGAAGGTCATGGTAATGA+AGG | 0.507811 | 8_3:-43298068 | Msa1289430:CDS |
| ATAATGGAAATGGAATTTGC+GGG | 0.512795 | 8_3:-43297951 | Msa1289430:CDS |
| CCGATGATTGTTGGGAGTCA+AGG | 0.516932 | 8_3:-43298335 | Msa1289430:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 8_3:-43297975 | Msa1289430:CDS |
| CCTTGACTCCCAACAATCAT+CGG | 0.519588 | 8_3:+43298335 | None:intergenic |
| AGCATTTATCAAGGTCAGAT+AGG | 0.519899 | 8_3:-43297785 | Msa1289430:CDS |
| CAGAATTCTCAAGCGAATGC+AGG | 0.540569 | 8_3:-43298245 | Msa1289430:CDS |
| TGATTACGGTTCTACGAATG+TGG | 0.550987 | 8_3:-43298378 | Msa1289430:CDS |
| TGTTTATCGGCAAATATTCG+AGG | 0.554010 | 8_3:-43297613 | Msa1289430:CDS |
| CGAATATTTGCCGATAAACA+AGG | 0.558539 | 8_3:+43297616 | None:intergenic |
| TTCTTAGTGAACCCAACACC+AGG | 0.567834 | 8_3:+43297501 | None:intergenic |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 8_3:-43297998 | Msa1289430:CDS |
| ACTCCCAACAATCATCGGAT+AGG | 0.580782 | 8_3:+43298340 | None:intergenic |
| TACATTGTGGCTCAGAAGGG+TGG | 0.583038 | 8_3:-43297528 | Msa1289430:CDS |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 8_3:-43297822 | Msa1289430:CDS |
| AGAGGAATGTGGATCAGTTG+AGG | 0.594052 | 8_3:+43297389 | None:intergenic |
| GGAGGCAATGAAAGTGATGA+TGG | 0.602419 | 8_3:-43298200 | Msa1289430:CDS |
| TCATATAATGGGATACATTG+TGG | 0.603031 | 8_3:-43297541 | Msa1289430:CDS |
| GGTGAAGATGATGAAAGTCA+AGG | 0.619507 | 8_3:-43298143 | Msa1289430:CDS |
| GGTCATGGTAATGAAGGTCA+TGG | 0.621031 | 8_3:-43298062 | Msa1289430:CDS |
| GAACAAATACAACTATCCGT+TGG | 0.622175 | 8_3:-43297247 | Msa1289430:CDS |
| GATAGTTCTGATGGGAGTCG+TGG | 0.630048 | 8_3:-43298278 | Msa1289430:CDS |
| GAATATTGACAAGAGGAATG+TGG | 0.631435 | 8_3:+43297378 | None:intergenic |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 8_3:-43297821 | Msa1289430:CDS |
| ATGTAGATGATAGTTCTGAT+GGG | 0.634382 | 8_3:-43298286 | Msa1289430:CDS |
| GGATACATTGTGGCTCAGAA+GGG | 0.635876 | 8_3:-43297531 | Msa1289430:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 8_3:-43297740 | Msa1289430:CDS |
| CAAATATAACTATTTGTGAG+TGG | 0.644906 | 8_3:+43297203 | None:intergenic |
| ATTGATGGTCTTCAATTACA+CGG | 0.645357 | 8_3:-43297576 | Msa1289430:CDS |
| AGTGGTAGAATATTGACAAG+AGG | 0.645661 | 8_3:+43297371 | None:intergenic |
| ATATAACTATTTGTGAGTGG+TGG | 0.650999 | 8_3:+43297206 | None:intergenic |
| AATGAAGGTCATGGTAGTGA+AGG | 0.653004 | 8_3:-43298053 | Msa1289430:CDS |
| TTTCAAACGTCCATCATCAG+TGG | 0.659865 | 8_3:+43297353 | None:intergenic |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 8_3:-43298009 | Msa1289430:CDS |
| TTAACGATGAGATTGTAATG+AGG | 0.666140 | 8_3:-43297845 | Msa1289430:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.683798 | 8_3:-43298077 | Msa1289430:CDS |
| GCAGCAGACAAAATCACCAA+CGG | 0.689299 | 8_3:+43297231 | None:intergenic |
| GGCAATGAAAGTGATGATGG+TGG | 0.706532 | 8_3:-43298197 | Msa1289430:CDS |
| GATAGTTCTGATGAAACTGG+AGG | 0.707194 | 8_3:-43298218 | Msa1289430:CDS |
| AGTGAAGGTGATGAAACTGA+AGG | 0.712471 | 8_3:-43298098 | Msa1289430:CDS |
| AGTGACAGTGATGAAAGTGA+AGG | 0.717258 | 8_3:-43298113 | Msa1289430:CDS |
| ACTGAAGGTGATGAAAGTGA+AGG | 0.722369 | 8_3:-43298083 | Msa1289430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACAACAATGACTTTA+CGG | - | chr8_3:43297220-43297239 | Msa1289430:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr8_3:43298087-43298106 | Msa1289430:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr8_3:43298088-43298107 | Msa1289430:CDS | 20.0% |
| !!! | AAAAATGTGTGTTGTTATTA+AGG | - | chr8_3:43298186-43298205 | Msa1289430:CDS | 20.0% |
| !! | AAAAAACAACAATGACTTTA+CGG | - | chr8_3:43297220-43297239 | Msa1289430:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr8_3:43298087-43298106 | Msa1289430:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr8_3:43298088-43298107 | Msa1289430:CDS | 20.0% |
| !!! | AAAAATGTGTGTTGTTATTA+AGG | - | chr8_3:43298186-43298205 | Msa1289430:CDS | 20.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr8_3:43297665-43297684 | Msa1289430:CDS | 25.0% |
| !! | AATAATGGAAATGGAATTTG+CGG | - | chr8_3:43297688-43297707 | Msa1289430:CDS | 25.0% |
| !! | TTTAAGTACTGTAAGTGTAA+AGG | - | chr8_3:43297737-43297756 | Msa1289430:CDS | 25.0% |
| ! | ATGTTAAGAAGAGTGATATT+AGG | - | chr8_3:43297765-43297784 | Msa1289430:CDS | 25.0% |
| !! | ATAACATATCTACCCTTTTT+GGG | + | chr8_3:43297944-43297963 | None:intergenic | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr8_3:43298300-43298319 | Msa1289430:CDS | 25.0% |
| !!! | AGATCAGATTATTTCTGTTT+TGG | - | chr8_3:43298337-43298356 | Msa1289430:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr8_3:43297665-43297684 | Msa1289430:CDS | 25.0% |
| !! | AATAATGGAAATGGAATTTG+CGG | - | chr8_3:43297688-43297707 | Msa1289430:CDS | 25.0% |
| !! | TTTAAGTACTGTAAGTGTAA+AGG | - | chr8_3:43297737-43297756 | Msa1289430:CDS | 25.0% |
| ! | ATGTTAAGAAGAGTGATATT+AGG | - | chr8_3:43297765-43297784 | Msa1289430:CDS | 25.0% |
| !! | ATAACATATCTACCCTTTTT+GGG | + | chr8_3:43297944-43297963 | None:intergenic | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr8_3:43298300-43298319 | Msa1289430:CDS | 25.0% |
| !!! | AGATCAGATTATTTCTGTTT+TGG | - | chr8_3:43298337-43298356 | Msa1289430:CDS | 25.0% |
| ! | AACAATGACTTTACGGATTT+TGG | - | chr8_3:43297227-43297246 | Msa1289430:CDS | 30.0% |
| GTAGAACCGTAATCATATTT+CGG | + | chr8_3:43297257-43297276 | None:intergenic | 30.0% | |
| !! | AATGTAGATGATAGTTCTGA+TGG | - | chr8_3:43297353-43297372 | Msa1289430:CDS | 30.0% |
| !! | ATGTAGATGATAGTTCTGAT+GGG | - | chr8_3:43297354-43297373 | Msa1289430:CDS | 30.0% |
| !! | GATTATAGTGTTGGTGATAA+AGG | - | chr8_3:43297476-43297495 | Msa1289430:CDS | 30.0% |
| ATTAACTGCTGAAGGAATAA+TGG | - | chr8_3:43297673-43297692 | Msa1289430:CDS | 30.0% | |
| ! | ATAATGGAAATGGAATTTGC+GGG | - | chr8_3:43297689-43297708 | Msa1289430:CDS | 30.0% |
| TTAACGATGAGATTGTAATG+AGG | - | chr8_3:43297795-43297814 | Msa1289430:CDS | 30.0% | |
| ! | CATAACATATCTACCCTTTT+TGG | + | chr8_3:43297945-43297964 | None:intergenic | 30.0% |
| ! | TGCATTTACACCTTGTTTAT+CGG | - | chr8_3:43298014-43298033 | Msa1289430:CDS | 30.0% |
| ! | ATTGATGGTCTTCAATTACA+CGG | - | chr8_3:43298064-43298083 | Msa1289430:CDS | 30.0% |
| ! | TCATATAATGGGATACATTG+TGG | - | chr8_3:43298099-43298118 | Msa1289430:CDS | 30.0% |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr8_3:43298299-43298318 | Msa1289430:CDS | 30.0% |
| !! | AAATGTCTATTTTGGGCATA+TGG | - | chr8_3:43298307-43298326 | Msa1289430:CDS | 30.0% |
| ! | AACAATGACTTTACGGATTT+TGG | - | chr8_3:43297227-43297246 | Msa1289430:CDS | 30.0% |
| GTAGAACCGTAATCATATTT+CGG | + | chr8_3:43297257-43297276 | None:intergenic | 30.0% | |
| !! | AATGTAGATGATAGTTCTGA+TGG | - | chr8_3:43297353-43297372 | Msa1289430:CDS | 30.0% |
| !! | ATGTAGATGATAGTTCTGAT+GGG | - | chr8_3:43297354-43297373 | Msa1289430:CDS | 30.0% |
| !! | GATTATAGTGTTGGTGATAA+AGG | - | chr8_3:43297476-43297495 | Msa1289430:CDS | 30.0% |
| ATTAACTGCTGAAGGAATAA+TGG | - | chr8_3:43297673-43297692 | Msa1289430:CDS | 30.0% | |
| ! | ATAATGGAAATGGAATTTGC+GGG | - | chr8_3:43297689-43297708 | Msa1289430:CDS | 30.0% |
| TTAACGATGAGATTGTAATG+AGG | - | chr8_3:43297795-43297814 | Msa1289430:CDS | 30.0% | |
| ! | CATAACATATCTACCCTTTT+TGG | + | chr8_3:43297945-43297964 | None:intergenic | 30.0% |
| ! | TGCATTTACACCTTGTTTAT+CGG | - | chr8_3:43298014-43298033 | Msa1289430:CDS | 30.0% |
| ! | ATTGATGGTCTTCAATTACA+CGG | - | chr8_3:43298064-43298083 | Msa1289430:CDS | 30.0% |
| ! | TCATATAATGGGATACATTG+TGG | - | chr8_3:43298099-43298118 | Msa1289430:CDS | 30.0% |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr8_3:43298299-43298318 | Msa1289430:CDS | 30.0% |
| !! | AAATGTCTATTTTGGGCATA+TGG | - | chr8_3:43298307-43298326 | Msa1289430:CDS | 30.0% |
| GGTTCACCGAAATATGATTA+CGG | - | chr8_3:43297248-43297267 | Msa1289430:CDS | 35.0% | |
| AAACCTATCCGATGATTGTT+GGG | - | chr8_3:43297297-43297316 | Msa1289430:CDS | 35.0% | |
| TGTTCTGGTGATTATAGTGT+TGG | - | chr8_3:43297467-43297486 | Msa1289430:CDS | 35.0% | |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr8_3:43297626-43297645 | Msa1289430:CDS | 35.0% |
| ! | TGCTGAAGGAATAATGGAAA+TGG | - | chr8_3:43297679-43297698 | Msa1289430:CDS | 35.0% |
| !! | GAGAGAAGAAGCATTTATCA+AGG | - | chr8_3:43297846-43297865 | Msa1289430:CDS | 35.0% |
| AGCATTTATCAAGGTCAGAT+AGG | - | chr8_3:43297855-43297874 | Msa1289430:CDS | 35.0% | |
| TGTAAATGCACAACACTAGA+TGG | + | chr8_3:43298004-43298023 | None:intergenic | 35.0% | |
| CGAATATTTGCCGATAAACA+AGG | + | chr8_3:43298027-43298046 | None:intergenic | 35.0% | |
| TGTTTATCGGCAAATATTCG+AGG | - | chr8_3:43298027-43298046 | Msa1289430:CDS | 35.0% | |
| GCAGATAAAGCACAAATTGA+TGG | - | chr8_3:43298049-43298068 | Msa1289430:CDS | 35.0% | |
| GAATATTGACAAGAGGAATG+TGG | + | chr8_3:43298265-43298284 | None:intergenic | 35.0% | |
| AGTGGTAGAATATTGACAAG+AGG | + | chr8_3:43298272-43298291 | None:intergenic | 35.0% | |
| CAATATTCTACCACTGATGA+TGG | - | chr8_3:43298277-43298296 | Msa1289430:CDS | 35.0% | |
| !!! | TTATTTCTGTTTTGGCGATG+TGG | - | chr8_3:43298345-43298364 | Msa1289430:CDS | 35.0% |
| GAACAAATACAACTATCCGT+TGG | - | chr8_3:43298393-43298412 | Msa1289430:CDS | 35.0% | |
| GGTTCACCGAAATATGATTA+CGG | - | chr8_3:43297248-43297267 | Msa1289430:CDS | 35.0% | |
| AAACCTATCCGATGATTGTT+GGG | - | chr8_3:43297297-43297316 | Msa1289430:CDS | 35.0% | |
| TGTTCTGGTGATTATAGTGT+TGG | - | chr8_3:43297467-43297486 | Msa1289430:CDS | 35.0% | |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr8_3:43297626-43297645 | Msa1289430:CDS | 35.0% |
| ! | TGCTGAAGGAATAATGGAAA+TGG | - | chr8_3:43297679-43297698 | Msa1289430:CDS | 35.0% |
| !! | GAGAGAAGAAGCATTTATCA+AGG | - | chr8_3:43297846-43297865 | Msa1289430:CDS | 35.0% |
| AGCATTTATCAAGGTCAGAT+AGG | - | chr8_3:43297855-43297874 | Msa1289430:CDS | 35.0% | |
| TGTAAATGCACAACACTAGA+TGG | + | chr8_3:43298004-43298023 | None:intergenic | 35.0% | |
| CGAATATTTGCCGATAAACA+AGG | + | chr8_3:43298027-43298046 | None:intergenic | 35.0% | |
| TGTTTATCGGCAAATATTCG+AGG | - | chr8_3:43298027-43298046 | Msa1289430:CDS | 35.0% | |
| GCAGATAAAGCACAAATTGA+TGG | - | chr8_3:43298049-43298068 | Msa1289430:CDS | 35.0% | |
| GAATATTGACAAGAGGAATG+TGG | + | chr8_3:43298265-43298284 | None:intergenic | 35.0% | |
| AGTGGTAGAATATTGACAAG+AGG | + | chr8_3:43298272-43298291 | None:intergenic | 35.0% | |
| CAATATTCTACCACTGATGA+TGG | - | chr8_3:43298277-43298296 | Msa1289430:CDS | 35.0% | |
| !!! | TTATTTCTGTTTTGGCGATG+TGG | - | chr8_3:43298345-43298364 | Msa1289430:CDS | 35.0% |
| GAACAAATACAACTATCCGT+TGG | - | chr8_3:43298393-43298412 | Msa1289430:CDS | 35.0% | |
| TGATTACGGTTCTACGAATG+TGG | - | chr8_3:43297262-43297281 | Msa1289430:CDS | 40.0% | |
| GAAACCTATCCGATGATTGT+TGG | - | chr8_3:43297296-43297315 | Msa1289430:CDS | 40.0% | |
| !! | GACGATAGTTCTGATGAAAC+TGG | - | chr8_3:43297419-43297438 | Msa1289430:CDS | 40.0% |
| !! | GATAGTTCTGATGAAACTGG+AGG | - | chr8_3:43297422-43297441 | Msa1289430:CDS | 40.0% |
| GGTGAAGATGATGAAAGTCA+AGG | - | chr8_3:43297497-43297516 | Msa1289430:CDS | 40.0% | |
| AGTGACAGTGATGAAAGTGA+AGG | - | chr8_3:43297527-43297546 | Msa1289430:CDS | 40.0% | |
| AGTGAAGGTGATGAAACTGA+AGG | - | chr8_3:43297542-43297561 | Msa1289430:CDS | 40.0% | |
| ACTGAAGGTGATGAAAGTGA+AGG | - | chr8_3:43297557-43297576 | Msa1289430:CDS | 40.0% | |
| ! | AGTGAAGGTCATGGTAATGA+AGG | - | chr8_3:43297572-43297591 | Msa1289430:CDS | 40.0% |
| ! | AATGAAGGTCATGGTAGTGA+AGG | - | chr8_3:43297587-43297606 | Msa1289430:CDS | 40.0% |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr8_3:43297631-43297650 | Msa1289430:CDS | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr8_3:43297637-43297656 | Msa1289430:CDS | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr8_3:43297642-43297661 | Msa1289430:CDS | 40.0% |
| CAGTATGTATGCAACAAGCA+GGG | - | chr8_3:43297818-43297837 | Msa1289430:CDS | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr8_3:43297819-43297838 | Msa1289430:CDS | 40.0% | |
| TGTTCACTACAGACCCAAAA+AGG | - | chr8_3:43297928-43297947 | Msa1289430:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr8_3:43297929-43297948 | Msa1289430:CDS | 40.0% | |
| CACTAGATGGAGTAAGTTCA+TGG | + | chr8_3:43297991-43298010 | None:intergenic | 40.0% | |
| TTTCAAACGTCCATCATCAG+TGG | + | chr8_3:43298290-43298309 | None:intergenic | 40.0% | |
| TGATTACGGTTCTACGAATG+TGG | - | chr8_3:43297262-43297281 | Msa1289430:CDS | 40.0% | |
| GAAACCTATCCGATGATTGT+TGG | - | chr8_3:43297296-43297315 | Msa1289430:CDS | 40.0% | |
| !! | GACGATAGTTCTGATGAAAC+TGG | - | chr8_3:43297419-43297438 | Msa1289430:CDS | 40.0% |
| !! | GATAGTTCTGATGAAACTGG+AGG | - | chr8_3:43297422-43297441 | Msa1289430:CDS | 40.0% |
| GGTGAAGATGATGAAAGTCA+AGG | - | chr8_3:43297497-43297516 | Msa1289430:CDS | 40.0% | |
| AGTGACAGTGATGAAAGTGA+AGG | - | chr8_3:43297527-43297546 | Msa1289430:CDS | 40.0% | |
| AGTGAAGGTGATGAAACTGA+AGG | - | chr8_3:43297542-43297561 | Msa1289430:CDS | 40.0% | |
| ACTGAAGGTGATGAAAGTGA+AGG | - | chr8_3:43297557-43297576 | Msa1289430:CDS | 40.0% | |
| ! | AGTGAAGGTCATGGTAATGA+AGG | - | chr8_3:43297572-43297591 | Msa1289430:CDS | 40.0% |
| ! | AATGAAGGTCATGGTAGTGA+AGG | - | chr8_3:43297587-43297606 | Msa1289430:CDS | 40.0% |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr8_3:43297631-43297650 | Msa1289430:CDS | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr8_3:43297637-43297656 | Msa1289430:CDS | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr8_3:43297642-43297661 | Msa1289430:CDS | 40.0% |
| CAGTATGTATGCAACAAGCA+GGG | - | chr8_3:43297818-43297837 | Msa1289430:CDS | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr8_3:43297819-43297838 | Msa1289430:CDS | 40.0% | |
| TGTTCACTACAGACCCAAAA+AGG | - | chr8_3:43297928-43297947 | Msa1289430:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr8_3:43297929-43297948 | Msa1289430:CDS | 40.0% | |
| CACTAGATGGAGTAAGTTCA+TGG | + | chr8_3:43297991-43298010 | None:intergenic | 40.0% | |
| TTTCAAACGTCCATCATCAG+TGG | + | chr8_3:43298290-43298309 | None:intergenic | 40.0% | |
| ACTCCCAACAATCATCGGAT+AGG | + | chr8_3:43297303-43297322 | None:intergenic | 45.0% | |
| CCTTGACTCCCAACAATCAT+CGG | + | chr8_3:43297308-43297327 | None:intergenic | 45.0% | |
| CAGAATTCTCAAGCGAATGC+AGG | - | chr8_3:43297395-43297414 | Msa1289430:CDS | 45.0% | |
| GGAGGCAATGAAAGTGATGA+TGG | - | chr8_3:43297440-43297459 | Msa1289430:CDS | 45.0% | |
| !! | GGCAATGAAAGTGATGATGG+TGG | - | chr8_3:43297443-43297462 | Msa1289430:CDS | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr8_3:43297452-43297471 | Msa1289430:CDS | 45.0% |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr8_3:43297563-43297582 | Msa1289430:CDS | 45.0% | |
| ! | GGTCATGGTAATGAAGGTCA+TGG | - | chr8_3:43297578-43297597 | Msa1289430:CDS | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr8_3:43297817-43297836 | Msa1289430:CDS | 45.0% | |
| GGATACATTGTGGCTCAGAA+GGG | - | chr8_3:43298109-43298128 | Msa1289430:CDS | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | + | chr8_3:43298142-43298161 | None:intergenic | 45.0% | |
| AGAGGAATGTGGATCAGTTG+AGG | + | chr8_3:43298254-43298273 | None:intergenic | 45.0% | |
| GCAGCAGACAAAATCACCAA+CGG | + | chr8_3:43298412-43298431 | None:intergenic | 45.0% | |
| ACTCCCAACAATCATCGGAT+AGG | + | chr8_3:43297303-43297322 | None:intergenic | 45.0% | |
| CCTTGACTCCCAACAATCAT+CGG | + | chr8_3:43297308-43297327 | None:intergenic | 45.0% | |
| CAGAATTCTCAAGCGAATGC+AGG | - | chr8_3:43297395-43297414 | Msa1289430:CDS | 45.0% | |
| GGAGGCAATGAAAGTGATGA+TGG | - | chr8_3:43297440-43297459 | Msa1289430:CDS | 45.0% | |
| !! | GGCAATGAAAGTGATGATGG+TGG | - | chr8_3:43297443-43297462 | Msa1289430:CDS | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr8_3:43297452-43297471 | Msa1289430:CDS | 45.0% |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr8_3:43297563-43297582 | Msa1289430:CDS | 45.0% | |
| ! | GGTCATGGTAATGAAGGTCA+TGG | - | chr8_3:43297578-43297597 | Msa1289430:CDS | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr8_3:43297817-43297836 | Msa1289430:CDS | 45.0% | |
| GGATACATTGTGGCTCAGAA+GGG | - | chr8_3:43298109-43298128 | Msa1289430:CDS | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | + | chr8_3:43298142-43298161 | None:intergenic | 45.0% | |
| AGAGGAATGTGGATCAGTTG+AGG | + | chr8_3:43298254-43298273 | None:intergenic | 45.0% | |
| GCAGCAGACAAAATCACCAA+CGG | + | chr8_3:43298412-43298431 | None:intergenic | 45.0% | |
| CCGATGATTGTTGGGAGTCA+AGG | - | chr8_3:43297305-43297324 | Msa1289430:CDS | 50.0% | |
| !! | GATAGTTCTGATGGGAGTCG+TGG | - | chr8_3:43297362-43297381 | Msa1289430:CDS | 50.0% |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr8_3:43297900-43297919 | Msa1289430:CDS | 50.0% |
| TAGTGAACACGAAGCCTAGC+TGG | + | chr8_3:43297917-43297936 | None:intergenic | 50.0% | |
| GGGATACATTGTGGCTCAGA+AGG | - | chr8_3:43298108-43298127 | Msa1289430:CDS | 50.0% | |
| TACATTGTGGCTCAGAAGGG+TGG | - | chr8_3:43298112-43298131 | Msa1289430:CDS | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | - | chr8_3:43298127-43298146 | Msa1289430:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | - | chr8_3:43298128-43298147 | Msa1289430:CDS | 50.0% | |
| CCGATGATTGTTGGGAGTCA+AGG | - | chr8_3:43297305-43297324 | Msa1289430:CDS | 50.0% | |
| !! | GATAGTTCTGATGGGAGTCG+TGG | - | chr8_3:43297362-43297381 | Msa1289430:CDS | 50.0% |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr8_3:43297900-43297919 | Msa1289430:CDS | 50.0% |
| TAGTGAACACGAAGCCTAGC+TGG | + | chr8_3:43297917-43297936 | None:intergenic | 50.0% | |
| GGGATACATTGTGGCTCAGA+AGG | - | chr8_3:43298108-43298127 | Msa1289430:CDS | 50.0% | |
| TACATTGTGGCTCAGAAGGG+TGG | - | chr8_3:43298112-43298131 | Msa1289430:CDS | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | - | chr8_3:43298127-43298146 | Msa1289430:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | - | chr8_3:43298128-43298147 | Msa1289430:CDS | 50.0% | |
| GCTCAGAAGGGTGGATATCC+TGG | - | chr8_3:43298121-43298140 | Msa1289430:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+TGG | - | chr8_3:43298121-43298140 | Msa1289430:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 43297212 | 43298450 | 43297212 | ID=Msa1289430;Name=Msa1289430 |
| chr8_3 | mRNA | 43297212 | 43298450 | 43297212 | ID=Msa1289430-mRNA-1;Parent=Msa1289430;Name=Msa1289430-mRNA-1;_AED=0.13;_eAED=0.15;_QI=0|-1|0|1|-1|1|1|0|412 |
| chr8_3 | exon | 43297212 | 43298450 | 43297212 | ID=Msa1289430-mRNA-1:exon:11875;Parent=Msa1289430-mRNA-1 |
| chr8_3 | CDS | 43297212 | 43298450 | 43297212 | ID=Msa1289430-mRNA-1:cds;Parent=Msa1289430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
