Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092630 | XP_003594033.1 | 86.134 | 714 | 80 | 2 | 1 | 695 | 1 | 714 | 0.0 | 1258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092630 | sp|O78328|DXS_CAPAN | 73.296 | 719 | 167 | 4 | 1 | 695 | 1 | 718 | 0.0 | 1048 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092630 | G7IFK9 | 86.134 | 714 | 80 | 2 | 1 | 695 | 1 | 714 | 0.0 | 1258 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa0092630 | 0.817946 | 2.532473e-52 | -8.615850e-47 |
| Msa0092630 | Msa0102070 | 0.817975 | 2.495226e-52 | -8.615850e-47 |
| Msa0092630 | Msa0145750 | 0.802308 | 5.966138e-49 | -8.615850e-47 |
| Msa0092630 | Msa0153910 | 0.802404 | 5.700204e-49 | -8.615850e-47 |
| Msa0092630 | Msa0200000 | 0.801842 | 7.438946e-49 | -8.615850e-47 |
| Msa0092630 | Msa0227480 | 0.833342 | 5.634165e-56 | -8.615850e-47 |
| Msa0092630 | Msa0232850 | 0.805314 | 1.417163e-49 | -8.615850e-47 |
| Msa0092630 | Msa0267000 | 0.824568 | 7.524099e-54 | -8.615850e-47 |
| Msa0092630 | Msa0267010 | 0.832546 | 8.889694e-56 | -8.615850e-47 |
| Msa0092630 | Msa0304170 | 0.803425 | 3.507786e-49 | -8.615850e-47 |
| Msa0092630 | Msa0342240 | 0.838307 | 3.107615e-57 | -8.615850e-47 |
| Msa0092630 | Msa0360510 | 0.807722 | 4.400487e-50 | -8.615850e-47 |
| Msa0092630 | Msa0365500 | 0.807910 | 4.012881e-50 | -8.615850e-47 |
| Msa0092630 | Msa0414410 | 0.800868 | 1.177882e-48 | -8.615850e-47 |
| Msa0092630 | Msa0414420 | 0.853661 | 2.062430e-61 | -8.615850e-47 |
| Msa0092630 | Msa0438620 | 0.802348 | 5.853697e-49 | -8.615850e-47 |
| Msa0092630 | Msa0445780 | 0.922598 | 7.988175e-89 | -8.615850e-47 |
| Msa0092630 | Msa0450000 | 0.822191 | 2.702873e-53 | -8.615850e-47 |
| Msa0092630 | Msa0452900 | 0.858927 | 5.884055e-63 | -8.615850e-47 |
| Msa0092630 | Msa0534540 | 0.806892 | 6.596040e-50 | -8.615850e-47 |
| Msa0092630 | Msa0564890 | 0.824622 | 7.306696e-54 | -8.615850e-47 |
| Msa0092630 | Msa0604350 | 0.810212 | 1.289392e-50 | -8.615850e-47 |
| Msa0092630 | Msa0636170 | 0.810324 | 1.219938e-50 | -8.615850e-47 |
| Msa0092630 | Msa0726140 | 0.814174 | 1.762066e-51 | -8.615850e-47 |
| Msa0092630 | Msa0729800 | 0.832037 | 1.187738e-55 | -8.615850e-47 |
| Msa0092630 | Msa0733290 | 0.805435 | 1.336781e-49 | -8.615850e-47 |
| Msa0092630 | Msa0743810 | 0.839176 | 1.852623e-57 | -8.615850e-47 |
| Msa0092630 | Msa0745060 | 0.830956 | 2.192229e-55 | -8.615850e-47 |
| Msa0092630 | Msa0767720 | 0.806411 | 8.332876e-50 | -8.615850e-47 |
| Msa0092630 | Msa0783160 | 0.841261 | 5.291240e-58 | -8.615850e-47 |
| Msa0092630 | Msa0825860 | 0.836718 | 7.938554e-57 | -8.615850e-47 |
| Msa0092630 | Msa0846330 | 0.811717 | 6.089679e-51 | -8.615850e-47 |
| Msa0092630 | Msa0846350 | 0.805167 | 1.521632e-49 | -8.615850e-47 |
| Msa0092630 | Msa0858980 | 0.807804 | 4.226358e-50 | -8.615850e-47 |
| Msa0092630 | Msa0865320 | 0.816835 | 4.504864e-52 | -8.615850e-47 |
| Msa0092630 | Msa0872230 | 0.939279 | 1.659402e-99 | -8.615850e-47 |
| Msa0092630 | Msa0888370 | 0.816107 | 6.556353e-52 | -8.615850e-47 |
| Msa0092630 | Msa0899430 | 0.808525 | 2.967764e-50 | -8.615850e-47 |
| Msa0092630 | Msa0952720 | 0.806914 | 6.526809e-50 | -8.615850e-47 |
| Msa0092630 | Msa0958550 | 0.801295 | 9.631515e-49 | -8.615850e-47 |
| Msa0092630 | Msa0974870 | 0.974405 | 4.246619e-138 | -8.615850e-47 |
| Msa0092630 | Msa0981270 | 0.994405 | 5.521547e-207 | -8.615850e-47 |
| Msa0092630 | Msa0989060 | 0.812114 | 4.989537e-51 | -8.615850e-47 |
| Msa0092630 | Msa1016280 | 0.844733 | 6.297340e-59 | -8.615850e-47 |
| Msa0092630 | Msa1023050 | 0.800704 | 1.271931e-48 | -8.615850e-47 |
| Msa0092630 | Msa1025360 | 0.841688 | 4.082536e-58 | -8.615850e-47 |
| Msa0092630 | Msa1025370 | 0.821931 | 3.104902e-53 | -8.615850e-47 |
| Msa0092630 | Msa1044830 | 0.828241 | 1.002877e-54 | -8.615850e-47 |
| Msa0092630 | Msa1044840 | 0.841558 | 4.419251e-58 | -8.615850e-47 |
| Msa0092630 | Msa1060840 | 0.825789 | 3.870858e-54 | -8.615850e-47 |
| Msa0092630 | Msa1092990 | 0.830052 | 3.648997e-55 | -8.615850e-47 |
| Msa0092630 | Msa1100980 | 0.827896 | 1.214061e-54 | -8.615850e-47 |
| Msa0092630 | Msa1109440 | 0.827994 | 1.150323e-54 | -8.615850e-47 |
| Msa0092630 | Msa1121200 | 0.815390 | 9.474619e-52 | -8.615850e-47 |
| Msa0092630 | Msa1135740 | 0.815487 | 9.017205e-52 | -8.615850e-47 |
| Msa0092630 | Msa1146110 | 0.814500 | 1.492493e-51 | -8.615850e-47 |
| Msa0092630 | Msa1149360 | 0.821105 | 4.818473e-53 | -8.615850e-47 |
| Msa0092630 | Msa1150370 | 0.809579 | 1.765152e-50 | -8.615850e-47 |
| Msa0092630 | Msa1187940 | 0.825112 | 5.598466e-54 | -8.615850e-47 |
| Msa0092630 | Msa1192640 | 0.830895 | 2.269391e-55 | -8.615850e-47 |
| Msa0092630 | Msa1269670 | 0.828983 | 6.638583e-55 | -8.615850e-47 |
| Msa0092630 | Msa1270230 | 0.843154 | 1.668700e-58 | -8.615850e-47 |
| Msa0092630 | Msa1270240 | 0.813479 | 2.507489e-51 | -8.615850e-47 |
| Msa0092630 | Msa1270270 | 0.813767 | 2.166066e-51 | -8.615850e-47 |
| Msa0092630 | Msa1283330 | 0.824839 | 6.492839e-54 | -8.615850e-47 |
| Msa0092630 | Msa1285930 | 0.851412 | 9.025837e-61 | -8.615850e-47 |
| Msa0092630 | Msa1287800 | 0.840637 | 7.712823e-58 | -8.615850e-47 |
| Msa0092630 | Msa1287810 | 0.853524 | 2.257586e-61 | -8.615850e-47 |
| Msa0092630 | Msa1310120 | 0.805695 | 1.178888e-49 | -8.615850e-47 |
| Msa0092630 | Msa1340590 | 0.824446 | 8.035270e-54 | -8.615850e-47 |
| Msa0092630 | Msa1397150 | 0.999838 | 0.000000e+00 | -8.615850e-47 |
| Msa0092630 | Msa1397580 | 0.822900 | 1.849228e-53 | -8.615850e-47 |
| Msa0092630 | Msa1404000 | 0.815667 | 8.220842e-52 | -8.615850e-47 |
| Msa0092630 | Msa1415310 | 0.800833 | 1.197356e-48 | -8.615850e-47 |
| Msa0092630 | Msa1422180 | 0.823724 | 1.187476e-53 | -8.615850e-47 |
| Msa0092630 | Msa1433120 | 0.808333 | 3.260502e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092630 | MtrunA17_Chr2g0286641 | 86.134 | 714 | 80 | 2 | 1 | 695 | 1 | 714 | 0.0 | 1258 |
| Msa0092630 | MtrunA17_Chr4g0066611 | 75.178 | 701 | 148 | 3 | 21 | 695 | 16 | 716 | 0.0 | 1060 |
| Msa0092630 | MtrunA17_Chr8g0367181 | 64.723 | 686 | 205 | 3 | 44 | 692 | 23 | 708 | 0.0 | 892 |
| Msa0092630 | MtrunA17_Chr8g0367201 | 66.461 | 647 | 195 | 1 | 68 | 692 | 62 | 708 | 0.0 | 887 |
| Msa0092630 | MtrunA17_Chr3g0138171 | 55.675 | 652 | 261 | 5 | 67 | 695 | 60 | 706 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092630 | AT4G15560.1 | 73.810 | 672 | 153 | 2 | 44 | 692 | 45 | 716 | 0.0 | 1018 |
| Msa0092630 | AT3G21500.3 | 75.118 | 635 | 147 | 3 | 59 | 692 | 50 | 674 | 0.0 | 987 |
| Msa0092630 | AT3G21500.2 | 76.102 | 590 | 130 | 3 | 59 | 647 | 50 | 629 | 0.0 | 927 |
| Msa0092630 | AT3G21500.1 | 75.932 | 590 | 130 | 4 | 59 | 647 | 50 | 628 | 0.0 | 920 |
| Msa0092630 | AT5G11380.1 | 51.511 | 662 | 272 | 9 | 56 | 692 | 59 | 696 | 0.0 | 653 |
| Msa0092630 | AT5G11380.3 | 47.901 | 524 | 224 | 9 | 56 | 554 | 59 | 558 | 2.37e-158 | 469 |
| Msa0092630 | AT5G11380.2 | 48.907 | 503 | 211 | 7 | 56 | 534 | 59 | 539 | 1.03e-157 | 468 |
| Msa0092630 | AT5G11380.4 | 48.290 | 497 | 211 | 7 | 56 | 528 | 59 | 533 | 7.16e-152 | 453 |
Find 184 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATGTTGTCACTGAAAA+AGG | 0.249215 | 1_2:-75233053 | Msa0092630:CDS |
| TTCTCATGTTGCTCAGTTCA+TGG | 0.260981 | 1_2:-75231206 | Msa0092630:CDS |
| GAGAGTGAATTTGATAGTTT+TGG | 0.274045 | 1_2:-75234798 | Msa0092630:CDS |
| GAAGAAACCTACACCCCTTT+TGG | 0.281281 | 1_2:-75235707 | Msa0092630:CDS |
| AGGCGAAAGAGTGGCCCTTT+TGG | 0.287344 | 1_2:-75231410 | Msa0092630:CDS |
| TATGGCATGTCTACCTAATA+TGG | 0.308128 | 1_2:-75231858 | Msa0092630:CDS |
| TATGAAGACTCTAACGATTA+AGG | 0.310044 | 1_2:-75235662 | Msa0092630:intron |
| GGAGCCATCACCACCATATT+AGG | 0.321626 | 1_2:+75231845 | None:intergenic |
| CATGGCATGATTGGTGGTTC+TGG | 0.323646 | 1_2:-75233197 | Msa0092630:CDS |
| GCCCTTGATGGTCTTCTTGA+TGG | 0.325921 | 1_2:-75231184 | Msa0092630:CDS |
| GCTCAGTTCATGGCCCTTGA+TGG | 0.326804 | 1_2:-75231196 | Msa0092630:CDS |
| GAAGGATCAATAGGAGGATT+TGG | 0.330255 | 1_2:-75231229 | Msa0092630:CDS |
| AAACCTAACCTGGTTGAGTC+TGG | 0.337829 | 1_2:+75235997 | None:intergenic |
| CCATGGTCGATATAAATATC+TGG | 0.342613 | 1_2:+75230804 | None:intergenic |
| CAAAATTCTTGGACAAAGAA+AGG | 0.345530 | 1_2:-75230718 | Msa0092630:CDS |
| CGTTAGAGTCTTCATATCTT+CGG | 0.357380 | 1_2:+75235669 | None:intergenic |
| TTGTCGATAACAAATCTTAC+TGG | 0.362049 | 1_2:+75231938 | None:intergenic |
| ATCCAGAGTGTTTCTCAAAC+TGG | 0.373688 | 1_2:-75235132 | Msa0092630:CDS |
| TGGTGGTTCTAACTATCAAT+GGG | 0.383908 | 1_2:-75236044 | Msa0092630:CDS |
| GACTACATTGGTCCTGTTGA+TGG | 0.387476 | 1_2:-75233146 | Msa0092630:CDS |
| TTCCATTTGCCCGTGGAAAT+CGG | 0.388002 | 1_2:+75231753 | None:intergenic |
| GACGAGTAAATTGCACAAAA+AGG | 0.388561 | 1_2:+75232553 | None:intergenic |
| GCTGGATTTGTTGGAGAAGA+TGG | 0.397017 | 1_2:-75231914 | Msa0092630:CDS |
| GTTAAGAGTCCTAAGAAAAC+TGG | 0.398320 | 1_2:-75233086 | Msa0092630:CDS |
| AAGGGCCACTCTTTCGCCTT+CGG | 0.398795 | 1_2:+75231414 | None:intergenic |
| ATAAAATACTCACTGGTAGA+AGG | 0.400303 | 1_2:-75234878 | Msa0092630:CDS |
| GCTGCAATGGGAGGTGGAAC+CGG | 0.400403 | 1_2:-75232682 | Msa0092630:CDS |
| GACTGCAGGGCAGGCATTTG+AGG | 0.403656 | 1_2:-75234020 | Msa0092630:CDS |
| GCTGAGCAATTAGCTGTTGC+TGG | 0.407903 | 1_2:-75230774 | Msa0092630:CDS |
| ACTCTTAACTTGTTTGAGAA+TGG | 0.410412 | 1_2:+75233100 | None:intergenic |
| ATCGACAAAGCTGGATTTGT+TGG | 0.413314 | 1_2:-75231923 | Msa0092630:CDS |
| CTTCGAGATGTTTCGATGTA+GGG | 0.413316 | 1_2:-75232633 | Msa0092630:CDS |
| CTACCTACCGCGGACCTTCA+TGG | 0.415412 | 1_2:-75233929 | Msa0092630:CDS |
| AGAGCACCAACTGGTGGTAT+TGG | 0.417530 | 1_2:+75233905 | None:intergenic |
| AAAACTGTTGCTGCTATTTG+AGG | 0.418915 | 1_2:+75230741 | None:intergenic |
| CTGCTGTCCCAAAGCCCAAA+AGG | 0.419334 | 1_2:+75231395 | None:intergenic |
| TTGGTGGTTCTAACTATCAA+TGG | 0.424273 | 1_2:-75236045 | Msa0092630:CDS |
| ACAGCTAGGTCGATCGTTAA+TGG | 0.425372 | 1_2:+75231778 | None:intergenic |
| GTGAATATTGCTAAGGTTGA+TGG | 0.425949 | 1_2:-75233227 | Msa0092630:intron |
| GTTAGAGTCTTCATATCTTC+GGG | 0.428007 | 1_2:+75235670 | None:intergenic |
| GCTAAGTTTGATCCTGCAAC+TGG | 0.431828 | 1_2:-75232808 | Msa0092630:CDS |
| TCTCAAACTGGAGGACATCT+AGG | 0.435608 | 1_2:-75235120 | Msa0092630:CDS |
| CTTGTGGGATGTTGGCCATC+AGG | 0.437600 | 1_2:-75235028 | Msa0092630:intron |
| AGGACATCTAGGATCGAATC+TGG | 0.438050 | 1_2:-75235109 | Msa0092630:CDS |
| TAGGAGCATTGAAAACATAA+TGG | 0.438816 | 1_2:+75235061 | None:intergenic |
| CCTTCGAGATGTTTCGATGT+AGG | 0.439173 | 1_2:-75232634 | Msa0092630:CDS |
| TTCCGATTTCCACGGGCAAA+TGG | 0.439179 | 1_2:-75231755 | Msa0092630:CDS |
| GAAGCCGACAAAAGCATTGT+TGG | 0.443373 | 1_2:-75232712 | Msa0092630:CDS |
| CGAAACATCTCGAAGGGAAT+CGG | 0.443552 | 1_2:+75232641 | None:intergenic |
| TAGGAACTAAAACAACTTGC+GGG | 0.449908 | 1_2:-75235174 | Msa0092630:CDS |
| TTTCCACGGGCAAATGGAAC+TGG | 0.450138 | 1_2:-75231749 | Msa0092630:CDS |
| TTGTGCATCAGTATCCGAAA+TGG | 0.455448 | 1_2:-75235743 | Msa0092630:CDS |
| ACTGATGCACAAACCCCATA+TGG | 0.458213 | 1_2:+75235754 | None:intergenic |
| TCTTCTTGATGGAAAATTGA+AGG | 0.462055 | 1_2:-75231173 | Msa0092630:intron |
| GATACTTTACCGTATCCAAA+AGG | 0.462570 | 1_2:+75235692 | None:intergenic |
| TGTGCATCAGTATCCGAAAT+GGG | 0.464344 | 1_2:-75235742 | Msa0092630:CDS |
| GCAGTTTGGCTCAAAAGGAC+AGG | 0.469469 | 1_2:+75236100 | None:intergenic |
| TGCACGTTTCTGCAAGCCAT+TGG | 0.470257 | 1_2:-75231308 | Msa0092630:CDS |
| ACATGTTAACAGATAGGAAA+AGG | 0.470576 | 1_2:-75231448 | Msa0092630:intron |
| ACTGTGGAAGAAGGATCAAT+AGG | 0.471946 | 1_2:-75231238 | Msa0092630:CDS |
| TCAACACTATTTGAAGAACT+TGG | 0.472738 | 1_2:-75233173 | Msa0092630:CDS |
| AGGCAGAAAGATGGATTAAG+TGG | 0.473089 | 1_2:-75234837 | Msa0092630:CDS |
| AGATTTGTTATCGACAAAGC+TGG | 0.474221 | 1_2:-75231932 | Msa0092630:CDS |
| CGAAGCAGAGATTATGCATA+TGG | 0.475633 | 1_2:-75231816 | Msa0092630:CDS |
| TCCTATAGACAAAATCTTGT+GGG | 0.476226 | 1_2:-75235043 | Msa0092630:CDS |
| CTGAAACGATCAACTCCTCT+TGG | 0.478748 | 1_2:-75236064 | Msa0092630:CDS |
| GGCGGTGGGTAGAGATCTAA+AGG | 0.482790 | 1_2:-75234086 | Msa0092630:CDS |
| GAGATTTGACTGAAGATATC+CGG | 0.489301 | 1_2:+75233985 | None:intergenic |
| GACAAAATCTTGTGGGATGT+TGG | 0.491871 | 1_2:-75235036 | Msa0092630:CDS |
| AGCTCAACAACAATGTCAGC+AGG | 0.492313 | 1_2:-75234765 | Msa0092630:CDS |
| GAATTGCCACCAGGGAATAG+AGG | 0.510992 | 1_2:-75231722 | Msa0092630:CDS |
| GGATGTGATCATGGCATGAT+TGG | 0.512036 | 1_2:-75233206 | Msa0092630:CDS |
| CATAGCACCATCACCGATGA+TGG | 0.512307 | 1_2:+75234042 | None:intergenic |
| AACCTAACCTGGTTGAGTCT+GGG | 0.512700 | 1_2:+75235998 | None:intergenic |
| CCAGATATTTATATCGACCA+TGG | 0.516787 | 1_2:-75230804 | Msa0092630:CDS |
| GCAACAGCTAATTGCTCAGC+TGG | 0.516828 | 1_2:+75230777 | None:intergenic |
| TGCTGTCCCAAAGCCCAAAA+GGG | 0.518857 | 1_2:+75231396 | None:intergenic |
| AAACCTCATGTGATTTCGCT+AGG | 0.519301 | 1_2:+75231266 | None:intergenic |
| TCAATGCTATGACCATCAAC+AGG | 0.520276 | 1_2:+75233134 | None:intergenic |
| CAGTTTGGCTCAAAAGGACA+GGG | 0.521229 | 1_2:+75236101 | None:intergenic |
| CATCTACTCAGAGCACCAAC+TGG | 0.523518 | 1_2:+75233896 | None:intergenic |
| CTCCTATAGACAAAATCTTG+TGG | 0.525889 | 1_2:-75235044 | Msa0092630:CDS |
| ATACTTTACCGTATCCAAAA+GGG | 0.529734 | 1_2:+75235693 | None:intergenic |
| AGGTAAGGAGAAAACCATAT+GGG | 0.531352 | 1_2:-75235768 | Msa0092630:CDS |
| GGTACTCACATCATGCTTTG+CGG | 0.533753 | 1_2:-75232755 | Msa0092630:CDS |
| AACATACTTACCTTGACAAG+AGG | 0.534272 | 1_2:+75233848 | None:intergenic |
| TGGTGCTATGACTGCAGGGC+AGG | 0.534315 | 1_2:-75234029 | Msa0092630:CDS |
| GGTGATGGTGCTATGACTGC+AGG | 0.536641 | 1_2:-75234034 | Msa0092630:CDS |
| ACAACAATGTCAGCAGGGCT+AGG | 0.536842 | 1_2:-75234759 | Msa0092630:intron |
| AAGGTTGATGGATGTGATCA+TGG | 0.538673 | 1_2:-75233215 | Msa0092630:CDS |
| TAAATATCTGGAAACACCAT+TGG | 0.539217 | 1_2:+75230816 | None:intergenic |
| ATAATCTCTGCTTCGTCAGA+AGG | 0.540250 | 1_2:+75231824 | None:intergenic |
| AATAATGTGGTCACCATCAT+CGG | 0.543548 | 1_2:-75234055 | Msa0092630:CDS |
| CATACATTGAGGCAGAAAGA+TGG | 0.543587 | 1_2:-75234846 | Msa0092630:CDS |
| CTCTGAGTAGATGTCTCAGC+AGG | 0.543966 | 1_2:-75233886 | Msa0092630:CDS |
| TCTACCTAATATGGTGGTGA+TGG | 0.548667 | 1_2:-75231849 | Msa0092630:CDS |
| TGTGATCATGGCATGATTGG+TGG | 0.549795 | 1_2:-75233203 | Msa0092630:CDS |
| ATCTCGAAGGGAATCGGTGA+AGG | 0.551457 | 1_2:+75232647 | None:intergenic |
| ATACATGCTGCAATGGGAGG+TGG | 0.551655 | 1_2:-75232688 | Msa0092630:CDS |
| TAGGTAAGGAGAAAACCATA+TGG | 0.552253 | 1_2:-75235769 | Msa0092630:CDS |
| GAATAGAGGCATTCCTCTTG+AGG | 0.552272 | 1_2:-75231708 | Msa0092630:intron |
| ACCGTATCCAAAAGGGGTGT+AGG | 0.554410 | 1_2:+75235700 | None:intergenic |
| TCCATCAAGAAGACCATCAA+GGG | 0.555768 | 1_2:+75231183 | None:intergenic |
| ATACTCTAACTCACCTCAAG+AGG | 0.555952 | 1_2:+75231695 | None:intergenic |
| AGAGGAATGCCTCTATTCCC+TGG | 0.556815 | 1_2:+75231713 | None:intergenic |
| AAACGATCAACTCCTCTTGG+TGG | 0.558744 | 1_2:-75236061 | Msa0092630:CDS |
| CACGCTGTTACATTTGCCGC+AGG | 0.559010 | 1_2:-75232598 | Msa0092630:CDS |
| CTAGCTGTTTCCGATTTCCA+CGG | 0.559137 | 1_2:-75231763 | Msa0092630:CDS |
| TTCCATCAAGAAGACCATCA+AGG | 0.560580 | 1_2:+75231182 | None:intergenic |
| CGTGGAAATCGGAAACAGCT+AGG | 0.561026 | 1_2:+75231764 | None:intergenic |
| CTCCAGTTTGAGAAACACTC+TGG | 0.562966 | 1_2:+75235130 | None:intergenic |
| GCCGCAGGTCTAGCTTGTGA+AGG | 0.565344 | 1_2:-75232583 | Msa0092630:CDS |
| ATTGCTCAGCTGGTGATCCA+TGG | 0.566910 | 1_2:+75230787 | None:intergenic |
| TTGCAATCCCAGACTCAACC+AGG | 0.568095 | 1_2:-75236005 | Msa0092630:intron |
| GTGACAACATGGATTAGTAC+AGG | 0.569539 | 1_2:+75233062 | None:intergenic |
| GTTGGAATACATGCTGCAAT+GGG | 0.571998 | 1_2:-75232694 | Msa0092630:CDS |
| GAACTTGGACTTGACTACAT+TGG | 0.572725 | 1_2:-75233158 | Msa0092630:CDS |
| TGTTGGAATACATGCTGCAA+TGG | 0.575153 | 1_2:-75232695 | Msa0092630:CDS |
| TGGCTTGCTTGTCACGGTGG+CGG | 0.576309 | 1_2:-75231332 | Msa0092630:CDS |
| TCAAAAGAACCACAATGTGT+TGG | 0.576620 | 1_2:+75231890 | None:intergenic |
| ACTGGTGTAGAATTGCCACC+AGG | 0.577521 | 1_2:-75231731 | Msa0092630:CDS |
| TTTGAGGCAATGAATAATGC+CGG | 0.578565 | 1_2:-75234004 | Msa0092630:CDS |
| GTCATAAGCTCTCTGCAAGA+AGG | 0.579687 | 1_2:+75232531 | None:intergenic |
| CGAATGAGCGAACGGTCCAA+TGG | 0.582651 | 1_2:+75231292 | None:intergenic |
| TATCCACATAAAATACTCAC+TGG | 0.584714 | 1_2:-75234885 | Msa0092630:CDS |
| GGCAGAAAGATGGATTAAGT+GGG | 0.585018 | 1_2:-75234836 | Msa0092630:CDS |
| AGCATTGAAAACATAATGGA+GGG | 0.588745 | 1_2:+75235065 | None:intergenic |
| TAGCTGTTTCCGATTTCCAC+GGG | 0.589014 | 1_2:-75231762 | Msa0092630:CDS |
| GAGCATTGAAAACATAATGG+AGG | 0.590912 | 1_2:+75235064 | None:intergenic |
| ATCAGACAAACCTCTTGTCA+AGG | 0.591557 | 1_2:-75233858 | Msa0092630:intron |
| GAGTACCGGTGTGGGAGCCT+TGG | 0.593110 | 1_2:+75232771 | None:intergenic |
| CTTGCAGAGAGCTTATGACC+AGG | 0.594809 | 1_2:-75232527 | Msa0092630:intron |
| TTCGAAGGTGGTGCATGATG+TGG | 0.595656 | 1_2:-75231975 | Msa0092630:intron |
| TATTATCCAGTGGAGGCCAA+TGG | 0.603817 | 1_2:-75230832 | Msa0092630:intron |
| GTGGTCACCATCATCGGTGA+TGG | 0.604425 | 1_2:-75234049 | Msa0092630:CDS |
| GCCTCAATATTGCAGCAACA+TGG | 0.604435 | 1_2:-75231352 | Msa0092630:CDS |
| GCGGTGGGTAGAGATCTAAA+GGG | 0.604452 | 1_2:-75234085 | Msa0092630:CDS |
| GTAGGAACTAAAACAACTTG+CGG | 0.604690 | 1_2:-75235175 | Msa0092630:intron |
| GGACATCTAGGATCGAATCT+GGG | 0.606948 | 1_2:-75235108 | Msa0092630:CDS |
| GCCATGTTGCTGCAATATTG+AGG | 0.614726 | 1_2:+75231351 | None:intergenic |
| ACAAAGAAAGGAGGCACTAG+AGG | 0.615250 | 1_2:-75230706 | Msa0092630:CDS |
| GCAAAGCATGATGTGAGTAC+CGG | 0.615355 | 1_2:+75232757 | None:intergenic |
| GGAATAAGATGCATACATTG+AGG | 0.616684 | 1_2:-75234857 | Msa0092630:CDS |
| GCAACATGGCTTGCTTGTCA+CGG | 0.617203 | 1_2:-75231338 | Msa0092630:CDS |
| CTACATCGAAACATCTCGAA+GGG | 0.619120 | 1_2:+75232635 | None:intergenic |
| GTGAAGGAAGTGATTCATGC+CGG | 0.621432 | 1_2:+75232663 | None:intergenic |
| GCTCACCGAAGGCGAAAGAG+TGG | 0.621613 | 1_2:-75231419 | Msa0092630:CDS |
| GAAGATGGTCCAACACATTG+TGG | 0.623107 | 1_2:-75231899 | Msa0092630:CDS |
| ACAAGTATCGCTACCTACCG+CGG | 0.628279 | 1_2:-75233939 | Msa0092630:CDS |
| GTGCATCAGTATCCGAAATG+GGG | 0.629009 | 1_2:-75235741 | Msa0092630:CDS |
| TACTTTACCGTATCCAAAAG+GGG | 0.632931 | 1_2:+75235694 | None:intergenic |
| GTGGAAGAAGGATCAATAGG+AGG | 0.634607 | 1_2:-75231235 | Msa0092630:CDS |
| AAAGGAAGAATGCTCACCGA+AGG | 0.635301 | 1_2:-75231430 | Msa0092630:CDS |
| AGCAGAGATTATGCATATGG+TGG | 0.641975 | 1_2:-75231813 | Msa0092630:CDS |
| TGCATCAGTATCCGAAATGG+GGG | 0.642842 | 1_2:-75235740 | Msa0092630:CDS |
| GGACCATGAAGGTCCGCGGT+AGG | 0.644302 | 1_2:+75233926 | None:intergenic |
| ACACCAGTTCCATTTGCCCG+TGG | 0.651582 | 1_2:+75231746 | None:intergenic |
| CTGGTGTAGAATTGCCACCA+GGG | 0.652032 | 1_2:-75231730 | Msa0092630:CDS |
| CGGTGGGTAGAGATCTAAAG+GGG | 0.653145 | 1_2:-75234084 | Msa0092630:CDS |
| GGTAAGGAGAAAACCATATG+GGG | 0.656189 | 1_2:-75235767 | Msa0092630:CDS |
| CATGGTCCAATACCACCAGT+TGG | 0.657891 | 1_2:-75233911 | Msa0092630:CDS |
| CATGATGTGAGTACCGGTGT+GGG | 0.658913 | 1_2:+75232763 | None:intergenic |
| CTAGGTTGCGAATGAGCGAA+CGG | 0.661008 | 1_2:+75231284 | None:intergenic |
| CAACCTAGCGAAATCACATG+AGG | 0.664346 | 1_2:-75231269 | Msa0092630:CDS |
| CTACTCAGAGCACCAACTGG+TGG | 0.665084 | 1_2:+75233899 | None:intergenic |
| CAAGACCAAGGCTCCCACAC+CGG | 0.667838 | 1_2:-75232776 | Msa0092630:CDS |
| CCTACATCGAAACATCTCGA+AGG | 0.669459 | 1_2:+75232634 | None:intergenic |
| CAGAGTGTTTCTCAAACTGG+AGG | 0.670619 | 1_2:-75235129 | Msa0092630:CDS |
| ACATGGCTTGCTTGTCACGG+TGG | 0.671087 | 1_2:-75231335 | Msa0092630:CDS |
| GCTCAACAACAATGTCAGCA+GGG | 0.672469 | 1_2:-75234764 | Msa0092630:CDS |
| AATTCTTGGACAAAGAAAGG+AGG | 0.672979 | 1_2:-75230715 | Msa0092630:CDS |
| TGGAAAACAGTTCAAGACCA+AGG | 0.680209 | 1_2:-75232788 | Msa0092630:CDS |
| ACCTTCACAAGCTAGACCTG+CGG | 0.682356 | 1_2:+75232582 | None:intergenic |
| GTGATGGTGCTATGACTGCA+GGG | 0.687716 | 1_2:-75234033 | Msa0092630:CDS |
| GGAATACATGCTGCAATGGG+AGG | 0.692170 | 1_2:-75232691 | Msa0092630:CDS |
| CTGGTGGTATTGGACCATGA+AGG | 0.697503 | 1_2:+75233915 | None:intergenic |
| GGCATGTCTACCTAATATGG+TGG | 0.702209 | 1_2:-75231855 | Msa0092630:CDS |
| GCATGATGTGAGTACCGGTG+TGG | 0.705105 | 1_2:+75232762 | None:intergenic |
| GGAATGCCTCTATTCCCTGG+TGG | 0.706633 | 1_2:+75231716 | None:intergenic |
| TATTGGACCATGAAGGTCCG+CGG | 0.710162 | 1_2:+75233922 | None:intergenic |
| GGTGGTTCTAACTATCAATG+GGG | 0.716011 | 1_2:-75236043 | Msa0092630:CDS |
| TGATAGTTAGAACCACCAAG+AGG | 0.716360 | 1_2:+75236049 | None:intergenic |
| AAAGCAGCAGACAAGTACCA+TGG | 0.719356 | 1_2:-75233008 | Msa0092630:intron |
| GGTGGGTAGAGATCTAAAGG+GGG | 0.788838 | 1_2:-75234083 | Msa0092630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTTTGTTAAAAAAAT+AGG | + | chr1_2:75231457-75231476 | None:intergenic | 10.0% |
| !!! | TATTTTATTTATATAAGCTA+TGG | + | chr1_2:75232134-75232153 | None:intergenic | 10.0% |
| !!! | AATATAGTCAAATATTTTTT+TGG | + | chr1_2:75232522-75232541 | None:intergenic | 10.0% |
| !!! | ACTTTTTAAAATTTCAAATT+TGG | - | chr1_2:75233324-75233343 | Msa0092630:intron | 10.0% |
| !!! | ATGAGAATTTTTAAATATTT+GGG | + | chr1_2:75233350-75233369 | None:intergenic | 10.0% |
| !!! | AATGAGAATTTTTAAATATT+TGG | + | chr1_2:75233351-75233370 | None:intergenic | 10.0% |
| !! | AATACTATGTATAATATATA+AGG | - | chr1_2:75234329-75234348 | Msa0092630:intron | 10.0% |
| !!! | TGTATAATTTTTTTTTGAAA+AGG | - | chr1_2:75234361-75234380 | Msa0092630:intron | 10.0% |
| !! | AACAAAATTGAGTATAATAT+TGG | + | chr1_2:75231415-75231434 | None:intergenic | 15.0% |
| !!! | ATATTATACTCAATTTTGTT+TGG | - | chr1_2:75231415-75231434 | Msa0092630:CDS | 15.0% |
| !! | TGTAGTTAAAAATTCATAAT+TGG | + | chr1_2:75231539-75231558 | None:intergenic | 15.0% |
| !! | TCATGTAATAAAATTGTTAA+TGG | - | chr1_2:75231573-75231592 | Msa0092630:intron | 15.0% |
| !!! | TAATAAAATTGTTAATGGAT+TGG | - | chr1_2:75231578-75231597 | Msa0092630:intron | 15.0% |
| !! | TTTGAAAAAATCTATGTTAT+TGG | - | chr1_2:75231854-75231873 | Msa0092630:CDS | 15.0% |
| !!! | TTCTGATTTTATTTTTCTTT+TGG | - | chr1_2:75232453-75232472 | Msa0092630:intron | 15.0% |
| !! | ACATAAAAATTAGAATACTT+GGG | + | chr1_2:75232497-75232516 | None:intergenic | 15.0% |
| !! | TACATAAAAATTAGAATACT+TGG | + | chr1_2:75232498-75232517 | None:intergenic | 15.0% |
| !!! | CATAATTTGAAACTATAATA+AGG | + | chr1_2:75233170-75233189 | None:intergenic | 15.0% |
| !!! | TGCAATTTCTAAAAATATTA+GGG | + | chr1_2:75233263-75233282 | None:intergenic | 15.0% |
| !!! | TTGCAATTTCTAAAAATATT+AGG | + | chr1_2:75233264-75233283 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTAAAAAGTTGA+TGG | + | chr1_2:75233321-75233340 | None:intergenic | 15.0% |
| !! | TTATAAAGTGTAAAAGTTAT+GGG | + | chr1_2:75233409-75233428 | None:intergenic | 15.0% |
| !! | TTTATAAAGTGTAAAAGTTA+TGG | + | chr1_2:75233410-75233429 | None:intergenic | 15.0% |
| !!! | TTTAGGAAAATTAGAATTTT+AGG | + | chr1_2:75233528-75233547 | None:intergenic | 15.0% |
| !! | TTTAATTATACATATCTTTC+GGG | + | chr1_2:75234714-75234733 | None:intergenic | 15.0% |
| !! | CTTTAATTATACATATCTTT+CGG | + | chr1_2:75234715-75234734 | None:intergenic | 15.0% |
| !! | AAGTGAATTTATTCTAATAA+TGG | + | chr1_2:75235263-75235282 | None:intergenic | 15.0% |
| !!! | TATATTTAAACCAACTTGTT+TGG | - | chr1_2:75230873-75230892 | Msa0092630:intron | 20.0% |
| !! | AAAAAAAAAACCAAACAAGT+TGG | + | chr1_2:75230886-75230905 | None:intergenic | 20.0% |
| !! | ATAAGAATTTCACTATAAAC+TGG | - | chr1_2:75231231-75231250 | Msa0092630:CDS | 20.0% |
| !! | TAATGAACATGTAATGAATA+TGG | - | chr1_2:75231262-75231281 | Msa0092630:CDS | 20.0% |
| !! | AAAAAAATAGGCAATTTCTA+CGG | + | chr1_2:75231445-75231464 | None:intergenic | 20.0% |
| !! | CAAAAAAATGTGTAAAAACA+TGG | - | chr1_2:75231467-75231486 | Msa0092630:intron | 20.0% |
| !! | TCTATATCATTTATTGATGT+AGG | - | chr1_2:75231629-75231648 | Msa0092630:intron | 20.0% |
| !! | TATATTACACTTCAATTTGA+AGG | - | chr1_2:75232329-75232348 | Msa0092630:intron | 20.0% |
| !! | AGTGTTTATTATTTACCAAT+AGG | - | chr1_2:75232413-75232432 | Msa0092630:intron | 20.0% |
| !!! | ATATAGCTTTTGCAAAATTA+CGG | + | chr1_2:75233039-75233058 | None:intergenic | 20.0% |
| !!! | TTTTTTGTCAAAGATAAAGT+TGG | - | chr1_2:75233143-75233162 | Msa0092630:CDS | 20.0% |
| !!! | ATGTTTTAAAACATACACAT+TGG | - | chr1_2:75233205-75233224 | Msa0092630:CDS | 20.0% |
| !!! | ATGAGGTAATTGAAAATTTT+AGG | + | chr1_2:75233545-75233564 | None:intergenic | 20.0% |
| !! | TAATAAGTGGTGAATTTATT+AGG | + | chr1_2:75233888-75233907 | None:intergenic | 20.0% |
| !! | TTAATTATACATATCTTTCG+GGG | + | chr1_2:75234713-75234732 | None:intergenic | 20.0% |
| !! | CTTTCTAATAATCTTCATAA+GGG | + | chr1_2:75235179-75235198 | None:intergenic | 20.0% |
| !! | TCTTTCTAATAATCTTCATA+AGG | + | chr1_2:75235180-75235199 | None:intergenic | 20.0% |
| !! | ATCTAATGCAATTATTTAGT+GGG | + | chr1_2:75235290-75235309 | None:intergenic | 20.0% |
| !! | AATCTAATGCAATTATTTAG+TGG | + | chr1_2:75235291-75235310 | None:intergenic | 20.0% |
| !!! | ATTTCTCTTTAAAACAGTTT+TGG | - | chr1_2:75235324-75235343 | Msa0092630:intron | 20.0% |
| !!! | TAATTTTTTTTCCTCATTGA+CGG | - | chr1_2:75235853-75235872 | Msa0092630:intron | 20.0% |
| !! | ATTAAACCAACTTGTTTGTT+TGG | - | chr1_2:75230940-75230959 | Msa0092630:intron | 25.0% |
| ! | AAAAAACCAAACAAACAAGT+TGG | + | chr1_2:75230949-75230968 | None:intergenic | 25.0% |
| ! | TTCCATCATTAAAATTGAGA+TGG | - | chr1_2:75230986-75231005 | Msa0092630:intron | 25.0% |
| ! | TCCATCATTAAAATTGAGAT+GGG | - | chr1_2:75230987-75231006 | Msa0092630:intron | 25.0% |
| ! | GTCTAATTATGAATGTATGT+AGG | - | chr1_2:75231034-75231053 | Msa0092630:intron | 25.0% |
| ! | ATTATGAATGTATGTAGGTA+AGG | - | chr1_2:75231039-75231058 | Msa0092630:intron | 25.0% |
| ! | TCTAACGATTAAGGTAAAAT+AGG | - | chr1_2:75231169-75231188 | Msa0092630:intron | 25.0% |
| ! | TTTCACTATAAACTGGTTAA+TGG | - | chr1_2:75231238-75231257 | Msa0092630:CDS | 25.0% |
| ! | TGTATATTTGAACACTTGAA+AGG | + | chr1_2:75231309-75231328 | None:intergenic | 25.0% |
| ! | AATATTGTGCTCAAATACTA+GGG | - | chr1_2:75231376-75231395 | Msa0092630:CDS | 25.0% |
| ! | TAAGATATCCCATATTATGA+TGG | - | chr1_2:75231500-75231519 | Msa0092630:intron | 25.0% |
| !! | AATTCATAATTGGCTCATAA+GGG | + | chr1_2:75231529-75231548 | None:intergenic | 25.0% |
| !! | AAATTCATAATTGGCTCATA+AGG | + | chr1_2:75231530-75231549 | None:intergenic | 25.0% |
| !!! | TTAGTACTAGTTGATTTTCT+AGG | - | chr1_2:75231880-75231899 | Msa0092630:CDS | 25.0% |
| !! | GTCTCTAAATATTTTGTCTT+GGG | + | chr1_2:75232381-75232400 | None:intergenic | 25.0% |
| !! | TGTCTCTAAATATTTTGTCT+TGG | + | chr1_2:75232382-75232401 | None:intergenic | 25.0% |
| ! | ACTGAAAAGATATTTCCTAT+TGG | + | chr1_2:75232431-75232450 | None:intergenic | 25.0% |
| ! | GCTTTATATTAATGCACAAT+TGG | - | chr1_2:75232662-75232681 | Msa0092630:CDS | 25.0% |
| ! | ACATCGAAGAAATTCATTTA+TGG | + | chr1_2:75233063-75233082 | None:intergenic | 25.0% |
| ! | TCGATGTAAAATTTACTGTT+TGG | - | chr1_2:75233076-75233095 | Msa0092630:CDS | 25.0% |
| ! | TACTGTTTGGATGATAAATT+TGG | - | chr1_2:75233089-75233108 | Msa0092630:CDS | 25.0% |
| !! | ATTCAATCAAAGCATTTGAA+TGG | - | chr1_2:75233502-75233521 | Msa0092630:intron | 25.0% |
| ! | ATTGAATGAGCAATAATAAG+TGG | + | chr1_2:75233901-75233920 | None:intergenic | 25.0% |
| ! | TAGTATTAAATTACACTACC+TGG | + | chr1_2:75234316-75234335 | None:intergenic | 25.0% |
| ! | TAATTATACATATCTTTCGG+GGG | + | chr1_2:75234712-75234731 | None:intergenic | 25.0% |
| ! | TGTTGTACAATATGCTATAT+GGG | + | chr1_2:75234784-75234803 | None:intergenic | 25.0% |
| ! | ATGTTGTACAATATGCTATA+TGG | + | chr1_2:75234785-75234804 | None:intergenic | 25.0% |
| !!! | TTCTTTTGATGTCACTTATA+TGG | - | chr1_2:75234946-75234965 | Msa0092630:intron | 25.0% |
| !! | TGTTGAACTTTTTACATTGA+CGG | + | chr1_2:75235732-75235751 | None:intergenic | 25.0% |
| !! | GATCATATTGTTTTGCAGTT+TGG | + | chr1_2:75230739-75230758 | None:intergenic | 30.0% |
| TTCAACAAAAAAACCTAACC+TGG | + | chr1_2:75230838-75230857 | None:intergenic | 30.0% | |
| !! | TCCCATCTCAATTTTAATGA+TGG | + | chr1_2:75230991-75231010 | None:intergenic | 30.0% |
| ATACTTTACCGTATCCAAAA+GGG | + | chr1_2:75231132-75231151 | None:intergenic | 30.0% | |
| TATGAAGACTCTAACGATTA+AGG | - | chr1_2:75231160-75231179 | Msa0092630:intron | 30.0% | |
| CAATATTGTGCTCAAATACT+AGG | - | chr1_2:75231375-75231394 | Msa0092630:CDS | 30.0% | |
| ATATTGTGCTCAAATACTAG+GGG | - | chr1_2:75231377-75231396 | Msa0092630:CDS | 30.0% | |
| ! | ATTCATAATTGGCTCATAAG+GGG | + | chr1_2:75231528-75231547 | None:intergenic | 30.0% |
| ! | AGCATTGAAAACATAATGGA+GGG | + | chr1_2:75231760-75231779 | None:intergenic | 30.0% |
| !! | TAGGAGCATTGAAAACATAA+TGG | + | chr1_2:75231764-75231783 | None:intergenic | 30.0% |
| TCCTATAGACAAAATCTTGT+GGG | - | chr1_2:75231779-75231798 | Msa0092630:CDS | 30.0% | |
| TATCCACATAAAATACTCAC+TGG | - | chr1_2:75231937-75231956 | Msa0092630:CDS | 30.0% | |
| ATAAAATACTCACTGGTAGA+AGG | - | chr1_2:75231944-75231963 | Msa0092630:CDS | 30.0% | |
| !! | GAGAGTGAATTTGATAGTTT+TGG | - | chr1_2:75232024-75232043 | Msa0092630:intron | 30.0% |
| TCACGAAAGCTTAAATTGTT+AGG | - | chr1_2:75232587-75232606 | Msa0092630:CDS | 30.0% | |
| ! | TGACATTTTACTCCAAAAAC+AGG | - | chr1_2:75232710-75232729 | Msa0092630:CDS | 30.0% |
| ! | TTTTACTCCAAAAACAGGAA+TGG | - | chr1_2:75232715-75232734 | Msa0092630:CDS | 30.0% |
| GTGTAAAAGTTATGGGATAA+AGG | + | chr1_2:75233402-75233421 | None:intergenic | 30.0% | |
| CTTCATTCTTAAACTTTGCT+CGG | + | chr1_2:75233438-75233457 | None:intergenic | 30.0% | |
| TCAACACTATTTGAAGAACT+TGG | - | chr1_2:75233649-75233668 | Msa0092630:intron | 30.0% | |
| !! | ACTCTTAACTTGTTTGAGAA+TGG | + | chr1_2:75233725-75233744 | None:intergenic | 30.0% |
| ! | TATTCCAACAATGCTTTTGT+CGG | + | chr1_2:75234117-75234136 | None:intergenic | 30.0% |
| GGGAAGAAAAAAATACAACA+AGG | - | chr1_2:75234435-75234454 | Msa0092630:intron | 30.0% | |
| !!! | ATTGGTTTTGGGTTGTTTTT+TGG | + | chr1_2:75234489-75234508 | None:intergenic | 30.0% |
| AAACAACCCAAAACCAATAA+AGG | - | chr1_2:75234491-75234510 | Msa0092630:intron | 30.0% | |
| TACAATATGCTATATGGGAT+CGG | + | chr1_2:75234779-75234798 | None:intergenic | 30.0% | |
| TATATTTCATGTCCATTCGA+AGG | - | chr1_2:75234832-75234851 | Msa0092630:CDS | 30.0% | |
| TTGTCGATAACAAATCTTAC+TGG | + | chr1_2:75234887-75234906 | None:intergenic | 30.0% | |
| ! | ATAAAGTATTCGTGCAGAAA+TGG | + | chr1_2:75235240-75235259 | None:intergenic | 30.0% |
| !! | GTTTTGACATGTTAACAGAT+AGG | - | chr1_2:75235368-75235387 | Msa0092630:intron | 30.0% |
| ACATGTTAACAGATAGGAAA+AGG | - | chr1_2:75235374-75235393 | Msa0092630:intron | 30.0% | |
| TCTTCTTGATGGAAAATTGA+AGG | - | chr1_2:75235649-75235668 | Msa0092630:intron | 30.0% | |
| TTGTGTTTCATATTATCCAG+TGG | - | chr1_2:75235980-75235999 | Msa0092630:intron | 30.0% | |
| TAAATATCTGGAAACACCAT+TGG | + | chr1_2:75236009-75236028 | None:intergenic | 30.0% | |
| ! | GCAACAGTTTTCAAAATTCT+TGG | - | chr1_2:75236093-75236112 | Msa0092630:CDS | 30.0% |
| CAAAATTCTTGGACAAAGAA+AGG | - | chr1_2:75236104-75236123 | Msa0092630:CDS | 30.0% | |
| !! | TTGGTGGTTCTAACTATCAA+TGG | - | chr1_2:75230777-75230796 | Msa0092630:CDS | 35.0% |
| !! | TGGTGGTTCTAACTATCAAT+GGG | - | chr1_2:75230778-75230797 | Msa0092630:CDS | 35.0% |
| TAGGTAAGGAGAAAACCATA+TGG | - | chr1_2:75231053-75231072 | Msa0092630:intron | 35.0% | |
| AGGTAAGGAGAAAACCATAT+GGG | - | chr1_2:75231054-75231073 | Msa0092630:intron | 35.0% | |
| TACTTTACCGTATCCAAAAG+GGG | + | chr1_2:75231131-75231150 | None:intergenic | 35.0% | |
| GATACTTTACCGTATCCAAA+AGG | + | chr1_2:75231133-75231152 | None:intergenic | 35.0% | |
| GTTAGAGTCTTCATATCTTC+GGG | + | chr1_2:75231155-75231174 | None:intergenic | 35.0% | |
| CGTTAGAGTCTTCATATCTT+CGG | + | chr1_2:75231156-75231175 | None:intergenic | 35.0% | |
| GAACATGTAATGAATATGGC+AGG | - | chr1_2:75231266-75231285 | Msa0092630:CDS | 35.0% | |
| !! | AAGGGGTACCATCATAATAT+GGG | + | chr1_2:75231511-75231530 | None:intergenic | 35.0% |
| !! | TAAGGGGTACCATCATAATA+TGG | + | chr1_2:75231512-75231531 | None:intergenic | 35.0% |
| GTAGGAACTAAAACAACTTG+CGG | - | chr1_2:75231647-75231666 | Msa0092630:intron | 35.0% | |
| TAGGAACTAAAACAACTTGC+GGG | - | chr1_2:75231648-75231667 | Msa0092630:intron | 35.0% | |
| !! | GAGCATTGAAAACATAATGG+AGG | + | chr1_2:75231761-75231780 | None:intergenic | 35.0% |
| CTCCTATAGACAAAATCTTG+TGG | - | chr1_2:75231778-75231797 | Msa0092630:CDS | 35.0% | |
| ! | TCCCACAAGATTTTGTCTAT+AGG | + | chr1_2:75231783-75231802 | None:intergenic | 35.0% |
| ! | TAGGAGTATAATCAACCTGA+TGG | + | chr1_2:75231812-75231831 | None:intergenic | 35.0% |
| ! | CTACCAGTGAGTATTTTATG+TGG | + | chr1_2:75231943-75231962 | None:intergenic | 35.0% |
| GGAATAAGATGCATACATTG+AGG | - | chr1_2:75231965-75231984 | Msa0092630:CDS | 35.0% | |
| !!! | GAATTTGATAGTTTTGGCAC+TGG | - | chr1_2:75232030-75232049 | Msa0092630:intron | 35.0% |
| !!! | GTTTCTAGCCAGAAATTTTC+AGG | - | chr1_2:75232108-75232127 | Msa0092630:intron | 35.0% |
| AATTTAAGCTTTCGTGAGAG+AGG | + | chr1_2:75232584-75232603 | None:intergenic | 35.0% | |
| TGCACAATTGGATTTGTGAT+CGG | - | chr1_2:75232674-75232693 | Msa0092630:CDS | 35.0% | |
| AATAATGTGGTCACCATCAT+CGG | - | chr1_2:75232767-75232786 | Msa0092630:CDS | 35.0% | |
| ! | TTTGAGGCAATGAATAATGC+CGG | - | chr1_2:75232818-75232837 | Msa0092630:intron | 35.0% |
| GAGATTTGACTGAAGATATC+CGG | + | chr1_2:75232840-75232859 | None:intergenic | 35.0% | |
| AACATACTTACCTTGACAAG+AGG | + | chr1_2:75232977-75232996 | None:intergenic | 35.0% | |
| TCTTGTCAAGGTAAGTATGT+TGG | - | chr1_2:75232976-75232995 | Msa0092630:intron | 35.0% | |
| TTACCTCATTCAAGTACACT+CGG | - | chr1_2:75233556-75233575 | Msa0092630:intron | 35.0% | |
| GTGAATATTGCTAAGGTTGA+TGG | - | chr1_2:75233595-75233614 | Msa0092630:intron | 35.0% | |
| GTTAAGAGTCCTAAGAAAAC+TGG | - | chr1_2:75233736-75233755 | Msa0092630:intron | 35.0% | |
| ATCCATGTTGTCACTGAAAA+AGG | - | chr1_2:75233769-75233788 | Msa0092630:intron | 35.0% | |
| TGACTTTCTACTTTCATGAC+AGG | - | chr1_2:75233961-75233980 | Msa0092630:CDS | 35.0% | |
| !!! | CTAACATGGTTTAGTTTTGC+AGG | - | chr1_2:75233987-75234006 | Msa0092630:CDS | 35.0% |
| GACGAGTAAATTGCACAAAA+AGG | + | chr1_2:75234272-75234291 | None:intergenic | 35.0% | |
| !!! | TTTTGGGTTGTTTTTTGGTG+TGG | + | chr1_2:75234484-75234503 | None:intergenic | 35.0% |
| !!! | TTTTGGGTTTTTCGGTTTTG+AGG | + | chr1_2:75234568-75234587 | None:intergenic | 35.0% |
| AAACCGAAAAACCCAAAAAC+AGG | - | chr1_2:75234570-75234589 | Msa0092630:intron | 35.0% | |
| AGTGTCTTTCAGTTCTGTTT+GGG | + | chr1_2:75234689-75234708 | None:intergenic | 35.0% | |
| ! | AAAGCTCATTTCTTTTCACG+TGG | - | chr1_2:75234731-75234750 | Msa0092630:intron | 35.0% |
| ! | AAGCTCATTTCTTTTCACGT+GGG | - | chr1_2:75234732-75234751 | Msa0092630:intron | 35.0% |
| ACAATATGCTATATGGGATC+GGG | + | chr1_2:75234778-75234797 | None:intergenic | 35.0% | |
| !! | AGATTTGTTATCGACAAAGC+TGG | - | chr1_2:75234890-75234909 | Msa0092630:CDS | 35.0% |
| TCAAAAGAACCACAATGTGT+TGG | + | chr1_2:75234935-75234954 | None:intergenic | 35.0% | |
| TATGGCATGTCTACCTAATA+TGG | - | chr1_2:75234964-75234983 | Msa0092630:intron | 35.0% | |
| TGCATTAGATTGTGTATTGC+TGG | - | chr1_2:75235300-75235319 | Msa0092630:intron | 35.0% | |
| CTAAAGTCGCACAAATGATT+GGG | + | chr1_2:75235771-75235790 | None:intergenic | 35.0% | |
| ! | TCTAAAGTCGCACAAATGAT+TGG | + | chr1_2:75235772-75235791 | None:intergenic | 35.0% |
| !!! | TTTTTTTTCCTCATTGACGG+CGG | - | chr1_2:75235856-75235875 | Msa0092630:intron | 35.0% |
| TGTTTCATATTATCCAGTGG+AGG | - | chr1_2:75235983-75236002 | Msa0092630:intron | 35.0% | |
| CCATGGTCGATATAAATATC+TGG | + | chr1_2:75236021-75236040 | None:intergenic | 35.0% | |
| CCAGATATTTATATCGACCA+TGG | - | chr1_2:75236018-75236037 | Msa0092630:CDS | 35.0% | |
| ! | AAAACTGTTGCTGCTATTTG+AGG | + | chr1_2:75236084-75236103 | None:intergenic | 35.0% |
| AATTCTTGGACAAAGAAAGG+AGG | - | chr1_2:75236107-75236126 | Msa0092630:CDS | 35.0% | |
| !! | GTTTTGCAGTTTGGCTCAAA+AGG | + | chr1_2:75230730-75230749 | None:intergenic | 40.0% |
| TGATAGTTAGAACCACCAAG+AGG | + | chr1_2:75230776-75230795 | None:intergenic | 40.0% | |
| !! | GGTGGTTCTAACTATCAATG+GGG | - | chr1_2:75230779-75230798 | Msa0092630:CDS | 40.0% |
| GGTAAGGAGAAAACCATATG+GGG | - | chr1_2:75231055-75231074 | Msa0092630:intron | 40.0% | |
| TTGTGCATCAGTATCCGAAA+TGG | - | chr1_2:75231079-75231098 | Msa0092630:intron | 40.0% | |
| TGTGCATCAGTATCCGAAAT+GGG | - | chr1_2:75231080-75231099 | Msa0092630:intron | 40.0% | |
| ! | ATCCAGAGTGTTTCTCAAAC+TGG | - | chr1_2:75231690-75231709 | Msa0092630:intron | 40.0% |
| GACAAAATCTTGTGGGATGT+TGG | - | chr1_2:75231786-75231805 | Msa0092630:CDS | 40.0% | |
| ! | CTCTCTTGTGTGAATTTTGC+AGG | - | chr1_2:75231912-75231931 | Msa0092630:CDS | 40.0% |
| CATACATTGAGGCAGAAAGA+TGG | - | chr1_2:75231976-75231995 | Msa0092630:intron | 40.0% | |
| !! | AGGCAGAAAGATGGATTAAG+TGG | - | chr1_2:75231985-75232004 | Msa0092630:intron | 40.0% |
| !! | GGCAGAAAGATGGATTAAGT+GGG | - | chr1_2:75231986-75232005 | Msa0092630:intron | 40.0% |
| AGCTATGGCCTGAAAATTTC+TGG | + | chr1_2:75232119-75232138 | None:intergenic | 40.0% | |
| TACTCCAAAAACAGGAATGG+CGG | - | chr1_2:75232718-75232737 | Msa0092630:CDS | 40.0% | |
| AAAGGGGGACAACAATAATG+TGG | - | chr1_2:75232754-75232773 | Msa0092630:CDS | 40.0% | |
| ATCAGACAAACCTCTTGTCA+AGG | - | chr1_2:75232964-75232983 | Msa0092630:intron | 40.0% | |
| ! | GGTAAGTATGTTGGCTATCA+TGG | - | chr1_2:75232985-75233004 | Msa0092630:intron | 40.0% |
| TTTCCGAGTGTACTTGAATG+AGG | + | chr1_2:75233562-75233581 | None:intergenic | 40.0% | |
| CACAGCTGTGAATATTGCTA+AGG | - | chr1_2:75233588-75233607 | Msa0092630:intron | 40.0% | |
| !! | AAGGTTGATGGATGTGATCA+TGG | - | chr1_2:75233607-75233626 | Msa0092630:intron | 40.0% |
| GAACTTGGACTTGACTACAT+TGG | - | chr1_2:75233664-75233683 | Msa0092630:intron | 40.0% | |
| TCAATGCTATGACCATCAAC+AGG | + | chr1_2:75233691-75233710 | None:intergenic | 40.0% | |
| ! | AGTACAGGACCAGTTTTCTT+AGG | + | chr1_2:75233748-75233767 | None:intergenic | 40.0% |
| !! | GTGACAACATGGATTAGTAC+AGG | + | chr1_2:75233763-75233782 | None:intergenic | 40.0% |
| !!! | TGCCTTTTTCAGTGACAACA+TGG | + | chr1_2:75233774-75233793 | None:intergenic | 40.0% |
| ! | GTTGTCACTGAAAAAGGCAT+AGG | - | chr1_2:75233775-75233794 | Msa0092630:intron | 40.0% |
| TTGTAATGCCTGTTGTACCA+TGG | + | chr1_2:75233834-75233853 | None:intergenic | 40.0% | |
| TTCATGACAGGCATCTAACA+TGG | - | chr1_2:75233973-75233992 | Msa0092630:CDS | 40.0% | |
| ! | TTGAACTGTTTTCCAGTTGC+AGG | + | chr1_2:75234029-75234048 | None:intergenic | 40.0% |
| TGGAAAACAGTTCAAGACCA+AGG | - | chr1_2:75234034-75234053 | Msa0092630:CDS | 40.0% | |
| TGTTGGAATACATGCTGCAA+TGG | - | chr1_2:75234127-75234146 | Msa0092630:intron | 40.0% | |
| GTTGGAATACATGCTGCAAT+GGG | - | chr1_2:75234128-75234147 | Msa0092630:intron | 40.0% | |
| CTACATCGAAACATCTCGAA+GGG | + | chr1_2:75234190-75234209 | None:intergenic | 40.0% | |
| CTTCGAGATGTTTCGATGTA+GGG | - | chr1_2:75234189-75234208 | Msa0092630:intron | 40.0% | |
| !! | AACAAGGTGCCGCATATATA+CGG | - | chr1_2:75234451-75234470 | Msa0092630:intron | 40.0% |
| !!! | TCGAGGCCTTTATTGGTTTT+GGG | + | chr1_2:75234500-75234519 | None:intergenic | 40.0% |
| !!! | TTCGAGGCCTTTATTGGTTT+TGG | + | chr1_2:75234501-75234520 | None:intergenic | 40.0% |
| !!! | CAGCCTGTTTTTGGGTTTTT+CGG | + | chr1_2:75234576-75234595 | None:intergenic | 40.0% |
| !! | GTTAGGTTGTGTTGCTGTTT+CGG | + | chr1_2:75234649-75234668 | None:intergenic | 40.0% |
| GAGTGTCTTTCAGTTCTGTT+TGG | + | chr1_2:75234690-75234709 | None:intergenic | 40.0% | |
| ATTTCATGTCCATTCGAAGG+TGG | - | chr1_2:75234835-75234854 | Msa0092630:CDS | 40.0% | |
| ATCGACAAAGCTGGATTTGT+TGG | - | chr1_2:75234899-75234918 | Msa0092630:intron | 40.0% | |
| ! | TCTACCTAATATGGTGGTGA+TGG | - | chr1_2:75234973-75234992 | Msa0092630:intron | 40.0% |
| ATAATCTCTGCTTCGTCAGA+AGG | + | chr1_2:75235001-75235020 | None:intergenic | 40.0% | |
| CGAAGCAGAGATTATGCATA+TGG | - | chr1_2:75235006-75235025 | Msa0092630:intron | 40.0% | |
| AGCAGAGATTATGCATATGG+TGG | - | chr1_2:75235009-75235028 | Msa0092630:intron | 40.0% | |
| ATACTCTAACTCACCTCAAG+AGG | + | chr1_2:75235130-75235149 | None:intergenic | 40.0% | |
| AAACCTCATGTGATTTCGCT+AGG | + | chr1_2:75235559-75235578 | None:intergenic | 40.0% | |
| !! | ACATGAGGTTTTGATCACTG+TGG | - | chr1_2:75235568-75235587 | Msa0092630:intron | 40.0% |
| !! | GTTTTGATCACTGTGGAAGA+AGG | - | chr1_2:75235575-75235594 | Msa0092630:intron | 40.0% |
| ACTGTGGAAGAAGGATCAAT+AGG | - | chr1_2:75235584-75235603 | Msa0092630:intron | 40.0% | |
| GAAGGATCAATAGGAGGATT+TGG | - | chr1_2:75235593-75235612 | Msa0092630:intron | 40.0% | |
| TTCTCATGTTGCTCAGTTCA+TGG | - | chr1_2:75235616-75235635 | Msa0092630:intron | 40.0% | |
| TCCATCAAGAAGACCATCAA+GGG | + | chr1_2:75235642-75235661 | None:intergenic | 40.0% | |
| TTCCATCAAGAAGACCATCA+AGG | + | chr1_2:75235643-75235662 | None:intergenic | 40.0% | |
| ! | CAGTTTGGCTCAAAAGGACA+GGG | + | chr1_2:75230724-75230743 | None:intergenic | 45.0% |
| CTGAAACGATCAACTCCTCT+TGG | - | chr1_2:75230758-75230777 | Msa0092630:CDS | 45.0% | |
| AAACGATCAACTCCTCTTGG+TGG | - | chr1_2:75230761-75230780 | Msa0092630:CDS | 45.0% | |
| AACCTAACCTGGTTGAGTCT+GGG | + | chr1_2:75230827-75230846 | None:intergenic | 45.0% | |
| AAACCTAACCTGGTTGAGTC+TGG | + | chr1_2:75230828-75230847 | None:intergenic | 45.0% | |
| ACTGATGCACAAACCCCATA+TGG | + | chr1_2:75231071-75231090 | None:intergenic | 45.0% | |
| GTGCATCAGTATCCGAAATG+GGG | - | chr1_2:75231081-75231100 | Msa0092630:intron | 45.0% | |
| TGCATCAGTATCCGAAATGG+GGG | - | chr1_2:75231082-75231101 | Msa0092630:intron | 45.0% | |
| CTTATACTCCTCCCCCATTT+CGG | + | chr1_2:75231096-75231115 | None:intergenic | 45.0% | |
| ! | GAAGAAACCTACACCCCTTT+TGG | - | chr1_2:75231115-75231134 | Msa0092630:intron | 45.0% |
| ! | ACCTACACCCCTTTTGGATA+CGG | - | chr1_2:75231121-75231140 | Msa0092630:intron | 45.0% |
| CTCCAGTTTGAGAAACACTC+TGG | + | chr1_2:75231695-75231714 | None:intergenic | 45.0% | |
| ! | CAGAGTGTTTCTCAAACTGG+AGG | - | chr1_2:75231693-75231712 | Msa0092630:intron | 45.0% |
| TCTCAAACTGGAGGACATCT+AGG | - | chr1_2:75231702-75231721 | Msa0092630:intron | 45.0% | |
| ! | AGGACATCTAGGATCGAATC+TGG | - | chr1_2:75231713-75231732 | Msa0092630:CDS | 45.0% |
| ! | GGACATCTAGGATCGAATCT+GGG | - | chr1_2:75231714-75231733 | Msa0092630:CDS | 45.0% |
| AGCTCAACAACAATGTCAGC+AGG | - | chr1_2:75232057-75232076 | Msa0092630:intron | 45.0% | |
| GCTCAACAACAATGTCAGCA+GGG | - | chr1_2:75232058-75232077 | Msa0092630:intron | 45.0% | |
| AGCTCAGTGTGATTTCGACA+AGG | + | chr1_2:75233015-75233034 | None:intergenic | 45.0% | |
| GGATGTGATCATGGCATGAT+TGG | - | chr1_2:75233616-75233635 | Msa0092630:intron | 45.0% | |
| TGTGATCATGGCATGATTGG+TGG | - | chr1_2:75233619-75233638 | Msa0092630:intron | 45.0% | |
| GACTACATTGGTCCTGTTGA+TGG | - | chr1_2:75233676-75233695 | Msa0092630:intron | 45.0% | |
| AAAGCAGCAGACAAGTACCA+TGG | - | chr1_2:75233814-75233833 | Msa0092630:intron | 45.0% | |
| GACAAGTACCATGGTACAAC+AGG | - | chr1_2:75233823-75233842 | Msa0092630:intron | 45.0% | |
| GCTAAGTTTGATCCTGCAAC+TGG | - | chr1_2:75234014-75234033 | Msa0092630:CDS | 45.0% | |
| GCAAAGCATGATGTGAGTAC+CGG | + | chr1_2:75234068-75234087 | None:intergenic | 45.0% | |
| GGTACTCACATCATGCTTTG+CGG | - | chr1_2:75234067-75234086 | Msa0092630:CDS | 45.0% | |
| !! | GAAGCCGACAAAAGCATTGT+TGG | - | chr1_2:75234110-75234129 | Msa0092630:intron | 45.0% |
| GTGAAGGAAGTGATTCATGC+CGG | + | chr1_2:75234162-75234181 | None:intergenic | 45.0% | |
| CGAAACATCTCGAAGGGAAT+CGG | + | chr1_2:75234184-75234203 | None:intergenic | 45.0% | |
| CCTACATCGAAACATCTCGA+AGG | + | chr1_2:75234191-75234210 | None:intergenic | 45.0% | |
| CCTTCGAGATGTTTCGATGT+AGG | - | chr1_2:75234188-75234207 | Msa0092630:intron | 45.0% | |
| GTCATAAGCTCTCTGCAAGA+AGG | + | chr1_2:75234294-75234313 | None:intergenic | 45.0% | |
| GGTGGTGTTCCGTATATATG+CGG | + | chr1_2:75234463-75234482 | None:intergenic | 45.0% | |
| !!! | TGGGTTGTTTTTTGGTGTGG+TGG | + | chr1_2:75234481-75234500 | None:intergenic | 45.0% |
| TCGTTGTTCGAGGCCTTTAT+TGG | + | chr1_2:75234507-75234526 | None:intergenic | 45.0% | |
| AATAAAGGCCTCGAACAACG+AGG | - | chr1_2:75234506-75234525 | Msa0092630:intron | 45.0% | |
| !!! | TGGGTTTTTCGGTTTTGAGG+CGG | + | chr1_2:75234565-75234584 | None:intergenic | 45.0% |
| !! | TGTTTCGGTCTATTTCTGCC+TGG | + | chr1_2:75234634-75234653 | None:intergenic | 45.0% |
| AACACAACCTAACAGCACAG+TGG | - | chr1_2:75234656-75234675 | Msa0092630:intron | 45.0% | |
| !! | GCTGGATTTGTTGGAGAAGA+TGG | - | chr1_2:75234908-75234927 | Msa0092630:intron | 45.0% |
| GAAGATGGTCCAACACATTG+TGG | - | chr1_2:75234923-75234942 | Msa0092630:intron | 45.0% | |
| GGCATGTCTACCTAATATGG+TGG | - | chr1_2:75234967-75234986 | Msa0092630:intron | 45.0% | |
| ACAGCTAGGTCGATCGTTAA+TGG | + | chr1_2:75235047-75235066 | None:intergenic | 45.0% | |
| ! | CTAGCTGTTTCCGATTTCCA+CGG | - | chr1_2:75235059-75235078 | Msa0092630:CDS | 45.0% |
| ! | TAGCTGTTTCCGATTTCCAC+GGG | - | chr1_2:75235060-75235079 | Msa0092630:CDS | 45.0% |
| TTCCATTTGCCCGTGGAAAT+CGG | + | chr1_2:75235072-75235091 | None:intergenic | 45.0% | |
| !! | GAATAGAGGCATTCCTCTTG+AGG | - | chr1_2:75235114-75235133 | Msa0092630:CDS | 45.0% |
| AAAGGAAGAATGCTCACCGA+AGG | - | chr1_2:75235392-75235411 | Msa0092630:intron | 45.0% | |
| GCCTCAATATTGCAGCAACA+TGG | - | chr1_2:75235470-75235489 | Msa0092630:intron | 45.0% | |
| GCCATGTTGCTGCAATATTG+AGG | + | chr1_2:75235474-75235493 | None:intergenic | 45.0% | |
| CAACCTAGCGAAATCACATG+AGG | - | chr1_2:75235553-75235572 | Msa0092630:intron | 45.0% | |
| GTGGAAGAAGGATCAATAGG+AGG | - | chr1_2:75235587-75235606 | Msa0092630:intron | 45.0% | |
| TATTATCCAGTGGAGGCCAA+TGG | - | chr1_2:75235990-75236009 | Msa0092630:intron | 45.0% | |
| !! | ACAAAGAAAGGAGGCACTAG+AGG | - | chr1_2:75236116-75236135 | Msa0092630:CDS | 45.0% |
| !!! | TACATTATATATTTTTTTAA+AGG | - | chr1_2:75231325-75231344 | Msa0092630:CDS | 5.0% |
| !! | TTAATAATAATAACAATAAT+AGG | + | chr1_2:75231831-75231850 | None:intergenic | 5.0% |
| !!! | TTTTCAAAATATTAAAAATA+GGG | + | chr1_2:75233293-75233312 | None:intergenic | 5.0% |
| !!! | ATTTTCAAAATATTAAAAAT+AGG | + | chr1_2:75233294-75233313 | None:intergenic | 5.0% |
| !!! | ATTTTTAATATTTTGAAAAT+TGG | - | chr1_2:75233294-75233313 | Msa0092630:intron | 5.0% |
| ! | GCAGTTTGGCTCAAAAGGAC+AGG | + | chr1_2:75230725-75230744 | None:intergenic | 50.0% |
| TTGCAATCCCAGACTCAACC+AGG | - | chr1_2:75230817-75230836 | Msa0092630:CDS | 50.0% | |
| ATCCCAGACTCAACCAGGTT+AGG | - | chr1_2:75230822-75230841 | Msa0092630:CDS | 50.0% | |
| ATCAGTATCCGAAATGGGGG+AGG | - | chr1_2:75231085-75231104 | Msa0092630:intron | 50.0% | |
| ! | ACCGTATCCAAAAGGGGTGT+AGG | + | chr1_2:75231125-75231144 | None:intergenic | 50.0% |
| ACAACAATGTCAGCAGGGCT+AGG | - | chr1_2:75232063-75232082 | Msa0092630:intron | 50.0% | |
| TCCAAAAACAGGAATGGCGG+TGG | - | chr1_2:75232721-75232740 | Msa0092630:CDS | 50.0% | |
| CCAAAAACAGGAATGGCGGT+GGG | - | chr1_2:75232722-75232741 | Msa0092630:CDS | 50.0% | |
| GCGGTGGGTAGAGATCTAAA+GGG | - | chr1_2:75232737-75232756 | Msa0092630:CDS | 50.0% | |
| CGGTGGGTAGAGATCTAAAG+GGG | - | chr1_2:75232738-75232757 | Msa0092630:CDS | 50.0% | |
| GGTGGGTAGAGATCTAAAGG+GGG | - | chr1_2:75232739-75232758 | Msa0092630:CDS | 50.0% | |
| CATAGCACCATCACCGATGA+TGG | + | chr1_2:75232783-75232802 | None:intergenic | 50.0% | |
| !! | GTGATGGTGCTATGACTGCA+GGG | - | chr1_2:75232789-75232808 | Msa0092630:CDS | 50.0% |
| ! | ACAAGTATCGCTACCTACCG+CGG | - | chr1_2:75232883-75232902 | Msa0092630:intron | 50.0% |
| TATTGGACCATGAAGGTCCG+CGG | + | chr1_2:75232903-75232922 | None:intergenic | 50.0% | |
| ! | CTGGTGGTATTGGACCATGA+AGG | + | chr1_2:75232910-75232929 | None:intergenic | 50.0% |
| CATGGTCCAATACCACCAGT+TGG | - | chr1_2:75232911-75232930 | Msa0092630:intron | 50.0% | |
| ! | AGAGCACCAACTGGTGGTAT+TGG | + | chr1_2:75232920-75232939 | None:intergenic | 50.0% |
| ! | CATCTACTCAGAGCACCAAC+TGG | + | chr1_2:75232929-75232948 | None:intergenic | 50.0% |
| CTCTGAGTAGATGTCTCAGC+AGG | - | chr1_2:75232936-75232955 | Msa0092630:intron | 50.0% | |
| ! | CATGGCATGATTGGTGGTTC+TGG | - | chr1_2:75233625-75233644 | Msa0092630:intron | 50.0% |
| !! | CATGATGTGAGTACCGGTGT+GGG | + | chr1_2:75234062-75234081 | None:intergenic | 50.0% |
| GGAATACATGCTGCAATGGG+AGG | - | chr1_2:75234131-75234150 | Msa0092630:intron | 50.0% | |
| ATACATGCTGCAATGGGAGG+TGG | - | chr1_2:75234134-75234153 | Msa0092630:intron | 50.0% | |
| ATCTCGAAGGGAATCGGTGA+AGG | + | chr1_2:75234178-75234197 | None:intergenic | 50.0% | |
| ACCTTCACAAGCTAGACCTG+CGG | + | chr1_2:75234243-75234262 | None:intergenic | 50.0% | |
| CTTGCAGAGAGCTTATGACC+AGG | - | chr1_2:75234295-75234314 | Msa0092630:intron | 50.0% | |
| CAAGACGCACAAAGAACTCG+TGG | - | chr1_2:75234410-75234429 | Msa0092630:intron | 50.0% | |
| ACGCACAAAGAACTCGTGGT+AGG | - | chr1_2:75234414-75234433 | Msa0092630:intron | 50.0% | |
| CGCACAAAGAACTCGTGGTA+GGG | - | chr1_2:75234415-75234434 | Msa0092630:intron | 50.0% | |
| TATTCCAGCCTCGTTGTTCG+AGG | + | chr1_2:75234517-75234536 | None:intergenic | 50.0% | |
| !!! | TTTTGAGGCGGTGGTATGCT+TGG | + | chr1_2:75234553-75234572 | None:intergenic | 50.0% |
| !!! | GTTTTTCGGTTTTGAGGCGG+TGG | + | chr1_2:75234562-75234581 | None:intergenic | 50.0% |
| !! | CTGTGCAGCAGCCTGTTTTT+GGG | + | chr1_2:75234584-75234603 | None:intergenic | 50.0% |
| !!! | GCGTGCTGCTTCTGTTGTTT+TGG | + | chr1_2:75234607-75234626 | None:intergenic | 50.0% |
| AACAACAGAAGCAGCACGCA+AGG | - | chr1_2:75234608-75234627 | Msa0092630:intron | 50.0% | |
| TATGGGATCGGGTGCATTAG+TGG | + | chr1_2:75234767-75234786 | None:intergenic | 50.0% | |
| CATCATGCACCACCTTCGAA+TGG | + | chr1_2:75234847-75234866 | None:intergenic | 50.0% | |
| TTCGAAGGTGGTGCATGATG+TGG | - | chr1_2:75234847-75234866 | Msa0092630:CDS | 50.0% | |
| GGAGCCATCACCACCATATT+AGG | + | chr1_2:75234980-75234999 | None:intergenic | 50.0% | |
| CGTGGAAATCGGAAACAGCT+AGG | + | chr1_2:75235061-75235080 | None:intergenic | 50.0% | |
| TTCCGATTTCCACGGGCAAA+TGG | - | chr1_2:75235067-75235086 | Msa0092630:CDS | 50.0% | |
| TTTCCACGGGCAAATGGAAC+TGG | - | chr1_2:75235073-75235092 | Msa0092630:CDS | 50.0% | |
| ACTGGTGTAGAATTGCCACC+AGG | - | chr1_2:75235091-75235110 | Msa0092630:CDS | 50.0% | |
| CTGGTGTAGAATTGCCACCA+GGG | - | chr1_2:75235092-75235111 | Msa0092630:CDS | 50.0% | |
| GAATTGCCACCAGGGAATAG+AGG | - | chr1_2:75235100-75235119 | Msa0092630:CDS | 50.0% | |
| AGAGGAATGCCTCTATTCCC+TGG | + | chr1_2:75235112-75235131 | None:intergenic | 50.0% | |
| TGCTGTCCCAAAGCCCAAAA+GGG | + | chr1_2:75235429-75235448 | None:intergenic | 50.0% | |
| !! | GCAACATGGCTTGCTTGTCA+CGG | - | chr1_2:75235484-75235503 | Msa0092630:intron | 50.0% |
| TGCACGTTTCTGCAAGCCAT+TGG | - | chr1_2:75235514-75235533 | Msa0092630:intron | 50.0% | |
| CTAGGTTGCGAATGAGCGAA+CGG | + | chr1_2:75235541-75235560 | None:intergenic | 50.0% | |
| ! | GCCCTTGATGGTCTTCTTGA+TGG | - | chr1_2:75235638-75235657 | Msa0092630:intron | 50.0% |
| ATTGCTCAGCTGGTGATCCA+TGG | + | chr1_2:75236038-75236057 | None:intergenic | 50.0% | |
| GCAACAGCTAATTGCTCAGC+TGG | + | chr1_2:75236048-75236067 | None:intergenic | 50.0% | |
| GCTGAGCAATTAGCTGTTGC+TGG | - | chr1_2:75236048-75236067 | Msa0092630:CDS | 50.0% | |
| CTTGTGGGATGTTGGCCATC+AGG | - | chr1_2:75231794-75231813 | Msa0092630:CDS | 55.0% | |
| ! | CCCACCGCCATTCCTGTTTT+TGG | + | chr1_2:75232725-75232744 | None:intergenic | 55.0% |
| GGCGGTGGGTAGAGATCTAA+AGG | - | chr1_2:75232736-75232755 | Msa0092630:CDS | 55.0% | |
| GTGGTCACCATCATCGGTGA+TGG | - | chr1_2:75232773-75232792 | Msa0092630:CDS | 55.0% | |
| !! | GGTGATGGTGCTATGACTGC+AGG | - | chr1_2:75232788-75232807 | Msa0092630:CDS | 55.0% |
| ! | CTACTCAGAGCACCAACTGG+TGG | + | chr1_2:75232926-75232945 | None:intergenic | 55.0% |
| !! | GCATGATGTGAGTACCGGTG+TGG | + | chr1_2:75234063-75234082 | None:intergenic | 55.0% |
| CACGCTGTTACATTTGCCGC+AGG | - | chr1_2:75234224-75234243 | Msa0092630:intron | 55.0% | |
| ! | GCTGTGCAGCAGCCTGTTTT+TGG | + | chr1_2:75234585-75234604 | None:intergenic | 55.0% |
| ! | CTGCTTGCCACTGTGCTGTT+AGG | + | chr1_2:75234666-75234685 | None:intergenic | 55.0% |
| ACACCAGTTCCATTTGCCCG+TGG | + | chr1_2:75235079-75235098 | None:intergenic | 55.0% | |
| GGAATGCCTCTATTCCCTGG+TGG | + | chr1_2:75235109-75235128 | None:intergenic | 55.0% | |
| AAGGGCCACTCTTTCGCCTT+CGG | + | chr1_2:75235411-75235430 | None:intergenic | 55.0% | |
| ! | AGGCGAAAGAGTGGCCCTTT+TGG | - | chr1_2:75235412-75235431 | Msa0092630:intron | 55.0% |
| ! | GGCGAAAGAGTGGCCCTTTT+GGG | - | chr1_2:75235413-75235432 | Msa0092630:intron | 55.0% |
| ! | AGAGTGGCCCTTTTGGGCTT+TGG | - | chr1_2:75235419-75235438 | Msa0092630:intron | 55.0% |
| ! | GAGTGGCCCTTTTGGGCTTT+GGG | - | chr1_2:75235420-75235439 | Msa0092630:intron | 55.0% |
| CTGCTGTCCCAAAGCCCAAA+AGG | + | chr1_2:75235430-75235449 | None:intergenic | 55.0% | |
| !! | ACATGGCTTGCTTGTCACGG+TGG | - | chr1_2:75235487-75235506 | Msa0092630:intron | 55.0% |
| CGAATGAGCGAACGGTCCAA+TGG | + | chr1_2:75235533-75235552 | None:intergenic | 55.0% | |
| GCTCAGTTCATGGCCCTTGA+TGG | - | chr1_2:75235626-75235645 | Msa0092630:intron | 55.0% | |
| ! | GAAACACCATTGGCCTCCAC+TGG | + | chr1_2:75235999-75236018 | None:intergenic | 55.0% |
| !! | TGGTGCTATGACTGCAGGGC+AGG | - | chr1_2:75232793-75232812 | Msa0092630:CDS | 60.0% |
| GACTGCAGGGCAGGCATTTG+AGG | - | chr1_2:75232802-75232821 | Msa0092630:CDS | 60.0% | |
| CTACCTACCGCGGACCTTCA+TGG | - | chr1_2:75232893-75232912 | Msa0092630:intron | 60.0% | |
| CAAGACCAAGGCTCCCACAC+CGG | - | chr1_2:75234046-75234065 | Msa0092630:CDS | 60.0% | |
| GCTGCAATGGGAGGTGGAAC+CGG | - | chr1_2:75234140-75234159 | Msa0092630:intron | 60.0% | |
| ! | GCCGCAGGTCTAGCTTGTGA+AGG | - | chr1_2:75234239-75234258 | Msa0092630:intron | 60.0% |
| AAGGCCTCGAACAACGAGGC+TGG | - | chr1_2:75234510-75234529 | Msa0092630:intron | 60.0% | |
| GCTCACCGAAGGCGAAAGAG+TGG | - | chr1_2:75235403-75235422 | Msa0092630:intron | 60.0% | |
| !! | TGGCTTGCTTGTCACGGTGG+CGG | - | chr1_2:75235490-75235509 | Msa0092630:intron | 60.0% |
| CAGTGTCACCGCCGTCAATG+AGG | + | chr1_2:75235867-75235886 | None:intergenic | 60.0% | |
| GGACCATGAAGGTCCGCGGT+AGG | + | chr1_2:75232899-75232918 | None:intergenic | 65.0% | |
| !! | GAGTACCGGTGTGGGAGCCT+TGG | + | chr1_2:75234054-75234073 | None:intergenic | 65.0% |
| CAGAAGCAGCACGCAAGGCC+AGG | - | chr1_2:75234613-75234632 | Msa0092630:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 75230695 | 75236149 | 75230695 | ID=Msa0092630;Name=Msa0092630 |
| chr1_2 | mRNA | 75230695 | 75236149 | 75230695 | ID=Msa0092630-mRNA-1;Parent=Msa0092630;Name=Msa0092630-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.22|0|1|1|1|10|0|696 |
| chr1_2 | exon | 75236006 | 75236149 | 75236006 | ID=Msa0092630-mRNA-1:exon:26491;Parent=Msa0092630-mRNA-1 |
| chr1_2 | exon | 75235663 | 75235788 | 75235663 | ID=Msa0092630-mRNA-1:exon:26490;Parent=Msa0092630-mRNA-1 |
| chr1_2 | exon | 75235029 | 75235193 | 75235029 | ID=Msa0092630-mRNA-1:exon:26489;Parent=Msa0092630-mRNA-1 |
| chr1_2 | exon | 75234760 | 75234910 | 75234760 | ID=Msa0092630-mRNA-1:exon:26488;Parent=Msa0092630-mRNA-1 |
| chr1_2 | exon | 75233859 | 75234112 | 75233859 | ID=Msa0092630-mRNA-1:exon:26487;Parent=Msa0092630-mRNA-1 |
| chr1_2 | exon | 75233009 | 75233234 | 75233009 | ID=Msa0092630-mRNA-1:exon:26486;Parent=Msa0092630-mRNA-1 |
| chr1_2 | exon | 75232528 | 75232835 | 75232528 | ID=Msa0092630-mRNA-1:exon:26485;Parent=Msa0092630-mRNA-1 |
| chr1_2 | exon | 75231709 | 75231990 | 75231709 | ID=Msa0092630-mRNA-1:exon:26484;Parent=Msa0092630-mRNA-1 |
| chr1_2 | exon | 75231174 | 75231458 | 75231174 | ID=Msa0092630-mRNA-1:exon:26483;Parent=Msa0092630-mRNA-1 |
| chr1_2 | exon | 75230695 | 75230844 | 75230695 | ID=Msa0092630-mRNA-1:exon:26482;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75236006 | 75236149 | 75236006 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75235663 | 75235788 | 75235663 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75235029 | 75235193 | 75235029 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75234760 | 75234910 | 75234760 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75233859 | 75234112 | 75233859 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75233009 | 75233234 | 75233009 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75232528 | 75232835 | 75232528 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75231709 | 75231990 | 75231709 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75231174 | 75231458 | 75231174 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| chr1_2 | CDS | 75230695 | 75230844 | 75230695 | ID=Msa0092630-mRNA-1:cds;Parent=Msa0092630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
