Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397150 | XP_003594033.1 | 86.134 | 714 | 80 | 2 | 1 | 695 | 1 | 714 | 0.0 | 1258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397150 | sp|O78328|DXS_CAPAN | 73.296 | 719 | 167 | 4 | 1 | 695 | 1 | 718 | 0.0 | 1048 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397150 | G7IFK9 | 86.134 | 714 | 80 | 2 | 1 | 695 | 1 | 714 | 0.0 | 1258 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa1397150 | 0.817757 | 2.793974e-52 | -8.615850e-47 |
| Msa0092630 | Msa1397150 | 0.999838 | 0.000000e+00 | -8.615850e-47 |
| Msa0102070 | Msa1397150 | 0.817765 | 2.782977e-52 | -8.615850e-47 |
| Msa1397150 | Msa1397580 | 0.823157 | 1.611296e-53 | -8.615850e-47 |
| Msa1397150 | Msa1404000 | 0.815805 | 7.656646e-52 | -8.615850e-47 |
| Msa1397150 | Msa1408780 | 0.800219 | 1.596782e-48 | -8.615850e-47 |
| Msa1397150 | Msa1415310 | 0.800237 | 1.583511e-48 | -8.615850e-47 |
| Msa1397150 | Msa1422180 | 0.824081 | 9.793925e-54 | -8.615850e-47 |
| Msa1397150 | Msa1433120 | 0.807777 | 4.281929e-50 | -8.615850e-47 |
| Msa0604350 | Msa1397150 | 0.808978 | 2.374276e-50 | -8.615850e-47 |
| Msa0636170 | Msa1397150 | 0.810183 | 1.308625e-50 | -8.615850e-47 |
| Msa0726140 | Msa1397150 | 0.814161 | 1.773533e-51 | -8.615850e-47 |
| Msa0729800 | Msa1397150 | 0.830961 | 2.185887e-55 | -8.615850e-47 |
| Msa0733290 | Msa1397150 | 0.805727 | 1.161186e-49 | -8.615850e-47 |
| Msa0743810 | Msa1397150 | 0.839131 | 1.903567e-57 | -8.615850e-47 |
| Msa0745060 | Msa1397150 | 0.830947 | 2.203817e-55 | -8.615850e-47 |
| Msa0767720 | Msa1397150 | 0.805619 | 1.222912e-49 | -8.615850e-47 |
| Msa0783160 | Msa1397150 | 0.840951 | 6.381985e-58 | -8.615850e-47 |
| Msa0825860 | Msa1397150 | 0.836836 | 7.409691e-57 | -8.615850e-47 |
| Msa0145750 | Msa1397150 | 0.801197 | 1.008707e-48 | -8.615850e-47 |
| Msa0153910 | Msa1397150 | 0.802653 | 5.065614e-49 | -8.615850e-47 |
| Msa0200000 | Msa1397150 | 0.802275 | 6.061679e-49 | -8.615850e-47 |
| Msa0227480 | Msa1397150 | 0.831506 | 1.605790e-55 | -8.615850e-47 |
| Msa0232850 | Msa1397150 | 0.805192 | 1.502956e-49 | -8.615850e-47 |
| Msa1269670 | Msa1397150 | 0.828932 | 6.830149e-55 | -8.615850e-47 |
| Msa1270230 | Msa1397150 | 0.842726 | 2.168503e-58 | -8.615850e-47 |
| Msa1270240 | Msa1397150 | 0.812929 | 3.310195e-51 | -8.615850e-47 |
| Msa1270270 | Msa1397150 | 0.813316 | 2.723165e-51 | -8.615850e-47 |
| Msa1283330 | Msa1397150 | 0.824478 | 7.899204e-54 | -8.615850e-47 |
| Msa1285930 | Msa1397150 | 0.851350 | 9.398436e-61 | -8.615850e-47 |
| Msa1287800 | Msa1397150 | 0.840426 | 8.759863e-58 | -8.615850e-47 |
| Msa1287810 | Msa1397150 | 0.853443 | 2.382232e-61 | -8.615850e-47 |
| Msa1310120 | Msa1397150 | 0.806221 | 9.140590e-50 | -8.615850e-47 |
| Msa1340590 | Msa1397150 | 0.824584 | 7.458695e-54 | -8.615850e-47 |
| Msa0365500 | Msa1397150 | 0.807264 | 5.503665e-50 | -8.615850e-47 |
| Msa0414410 | Msa1397150 | 0.800448 | 1.434781e-48 | -8.615850e-47 |
| Msa0414420 | Msa1397150 | 0.853008 | 3.173826e-61 | -8.615850e-47 |
| Msa0438620 | Msa1397150 | 0.802429 | 5.635190e-49 | -8.615850e-47 |
| Msa0445780 | Msa1397150 | 0.923707 | 1.862289e-89 | -8.615850e-47 |
| Msa0450000 | Msa1397150 | 0.822405 | 2.411086e-53 | -8.615850e-47 |
| Msa0452900 | Msa1397150 | 0.858770 | 6.555741e-63 | -8.615850e-47 |
| Msa0981270 | Msa1397150 | 0.994468 | 1.700327e-207 | -8.615850e-47 |
| Msa0989060 | Msa1397150 | 0.812403 | 4.315609e-51 | -8.615850e-47 |
| Msa1016280 | Msa1397150 | 0.844571 | 6.964026e-59 | -8.615850e-47 |
| Msa1025360 | Msa1397150 | 0.841317 | 5.112778e-58 | -8.615850e-47 |
| Msa1025370 | Msa1397150 | 0.821329 | 4.277472e-53 | -8.615850e-47 |
| Msa1044830 | Msa1397150 | 0.828143 | 1.059280e-54 | -8.615850e-47 |
| Msa1044840 | Msa1397150 | 0.841102 | 5.823698e-58 | -8.615850e-47 |
| Msa1060840 | Msa1397150 | 0.824585 | 7.451993e-54 | -8.615850e-47 |
| Msa1092990 | Msa1397150 | 0.829757 | 4.306593e-55 | -8.615850e-47 |
| Msa1100980 | Msa1397150 | 0.827354 | 1.638791e-54 | -8.615850e-47 |
| Msa0267000 | Msa1397150 | 0.824094 | 9.725511e-54 | -8.615850e-47 |
| Msa0267010 | Msa1397150 | 0.832251 | 1.051804e-55 | -8.615850e-47 |
| Msa0304170 | Msa1397150 | 0.803485 | 3.409138e-49 | -8.615850e-47 |
| Msa0342240 | Msa1397150 | 0.838199 | 3.313223e-57 | -8.615850e-47 |
| Msa0360510 | Msa1397150 | 0.807913 | 4.007498e-50 | -8.615850e-47 |
| Msa1109440 | Msa1397150 | 0.827837 | 1.254739e-54 | -8.615850e-47 |
| Msa1121200 | Msa1397150 | 0.815026 | 1.141425e-51 | -8.615850e-47 |
| Msa1135740 | Msa1397150 | 0.815069 | 1.116798e-51 | -8.615850e-47 |
| Msa1146110 | Msa1397150 | 0.814494 | 1.497378e-51 | -8.615850e-47 |
| Msa1149360 | Msa1397150 | 0.820062 | 8.365540e-53 | -8.615850e-47 |
| Msa1150370 | Msa1397150 | 0.809750 | 1.621706e-50 | -8.615850e-47 |
| Msa1187940 | Msa1397150 | 0.824313 | 8.634983e-54 | -8.615850e-47 |
| Msa1192640 | Msa1397150 | 0.830774 | 2.430517e-55 | -8.615850e-47 |
| Msa0534540 | Msa1397150 | 0.806561 | 7.749092e-50 | -8.615850e-47 |
| Msa0564890 | Msa1397150 | 0.824448 | 8.026489e-54 | -8.615850e-47 |
| Msa0846330 | Msa1397150 | 0.810667 | 1.028316e-50 | -8.615850e-47 |
| Msa0846350 | Msa1397150 | 0.803837 | 2.881389e-49 | -8.615850e-47 |
| Msa0858980 | Msa1397150 | 0.807852 | 4.127941e-50 | -8.615850e-47 |
| Msa0865320 | Msa1397150 | 0.817539 | 3.129760e-52 | -8.615850e-47 |
| Msa0872230 | Msa1397150 | 0.938950 | 2.878084e-99 | -8.615850e-47 |
| Msa0888370 | Msa1397150 | 0.816291 | 5.964840e-52 | -8.615850e-47 |
| Msa0899430 | Msa1397150 | 0.807881 | 4.069887e-50 | -8.615850e-47 |
| Msa0952720 | Msa1397150 | 0.806055 | 9.906809e-50 | -8.615850e-47 |
| Msa0956270 | Msa1397150 | 0.800645 | 1.308056e-48 | -8.615850e-47 |
| Msa0958550 | Msa1397150 | 0.800443 | 1.438128e-48 | -8.615850e-47 |
| Msa0974870 | Msa1397150 | 0.974494 | 2.962083e-138 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397150 | MtrunA17_Chr2g0286641 | 86.134 | 714 | 80 | 2 | 1 | 695 | 1 | 714 | 0.0 | 1258 |
| Msa1397150 | MtrunA17_Chr4g0066611 | 75.178 | 701 | 148 | 3 | 21 | 695 | 16 | 716 | 0.0 | 1060 |
| Msa1397150 | MtrunA17_Chr8g0367181 | 64.723 | 686 | 205 | 3 | 44 | 692 | 23 | 708 | 0.0 | 892 |
| Msa1397150 | MtrunA17_Chr8g0367201 | 66.461 | 647 | 195 | 1 | 68 | 692 | 62 | 708 | 0.0 | 887 |
| Msa1397150 | MtrunA17_Chr3g0138171 | 55.675 | 652 | 261 | 5 | 67 | 695 | 60 | 706 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397150 | AT4G15560.1 | 73.810 | 672 | 153 | 2 | 44 | 692 | 45 | 716 | 0.0 | 1018 |
| Msa1397150 | AT3G21500.3 | 75.118 | 635 | 147 | 3 | 59 | 692 | 50 | 674 | 0.0 | 987 |
| Msa1397150 | AT3G21500.2 | 76.102 | 590 | 130 | 3 | 59 | 647 | 50 | 629 | 0.0 | 927 |
| Msa1397150 | AT3G21500.1 | 75.932 | 590 | 130 | 4 | 59 | 647 | 50 | 628 | 0.0 | 920 |
| Msa1397150 | AT5G11380.1 | 51.511 | 662 | 272 | 9 | 56 | 692 | 59 | 696 | 0.0 | 653 |
| Msa1397150 | AT5G11380.3 | 47.901 | 524 | 224 | 9 | 56 | 554 | 59 | 558 | 2.37e-158 | 469 |
| Msa1397150 | AT5G11380.2 | 48.907 | 503 | 211 | 7 | 56 | 534 | 59 | 539 | 1.03e-157 | 468 |
| Msa1397150 | AT5G11380.4 | 48.290 | 497 | 211 | 7 | 56 | 528 | 59 | 533 | 7.16e-152 | 453 |
Find 184 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATGTTGTCACTGAAAA+AGG | 0.249215 | tig0022131:-43017 | Msa1397150:CDS |
| TTCTCATGTTGCTCAGTTCA+TGG | 0.260981 | tig0022131:-41170 | Msa1397150:CDS |
| GAGAGTGAATTTGATAGTTT+TGG | 0.274045 | tig0022131:-44795 | Msa1397150:CDS |
| GAAGAAACCTACACCCCTTT+TGG | 0.281281 | tig0022131:-45704 | Msa1397150:CDS |
| AGGCGAAAGAGTGGCCCTTT+TGG | 0.287344 | tig0022131:-41374 | Msa1397150:CDS |
| TATGGCATGTCTACCTAATA+TGG | 0.308128 | tig0022131:-41822 | Msa1397150:CDS |
| TATGAAGACTCTAACGATTA+AGG | 0.310044 | tig0022131:-45659 | Msa1397150:intron |
| GGAGCCATCACCACCATATT+AGG | 0.321626 | tig0022131:+41809 | None:intergenic |
| CATGGCATGATTGGTGGTTC+TGG | 0.323646 | tig0022131:-43161 | Msa1397150:CDS |
| GCCCTTGATGGTCTTCTTGA+TGG | 0.325921 | tig0022131:-41148 | Msa1397150:CDS |
| GCTCAGTTCATGGCCCTTGA+TGG | 0.326804 | tig0022131:-41160 | Msa1397150:CDS |
| GAAGGATCAATAGGAGGATT+TGG | 0.330255 | tig0022131:-41193 | Msa1397150:CDS |
| AAACCTAACCTGGTTGAGTC+TGG | 0.337829 | tig0022131:+45994 | None:intergenic |
| CCATGGTCGATATAAATATC+TGG | 0.342613 | tig0022131:+40768 | None:intergenic |
| CAAAATTCTTGGACAAAGAA+AGG | 0.345530 | tig0022131:-40682 | Msa1397150:CDS |
| CGTTAGAGTCTTCATATCTT+CGG | 0.357380 | tig0022131:+45666 | None:intergenic |
| TTGTCGATAACAAATCTTAC+TGG | 0.362049 | tig0022131:+41902 | None:intergenic |
| ATCCAGAGTGTTTCTCAAAC+TGG | 0.373688 | tig0022131:-45129 | Msa1397150:CDS |
| TGGTGGTTCTAACTATCAAT+GGG | 0.383908 | tig0022131:-46041 | Msa1397150:CDS |
| GACTACATTGGTCCTGTTGA+TGG | 0.387476 | tig0022131:-43110 | Msa1397150:CDS |
| TTCCATTTGCCCGTGGAAAT+CGG | 0.388002 | tig0022131:+41717 | None:intergenic |
| GACGAGTAAATTGCACAAAA+AGG | 0.388561 | tig0022131:+42517 | None:intergenic |
| GCTGGATTTGTTGGAGAAGA+TGG | 0.397017 | tig0022131:-41878 | Msa1397150:CDS |
| GTTAAGAGTCCTAAGAAAAC+TGG | 0.398320 | tig0022131:-43050 | Msa1397150:CDS |
| AAGGGCCACTCTTTCGCCTT+CGG | 0.398795 | tig0022131:+41378 | None:intergenic |
| ATAAAATACTCACTGGTAGA+AGG | 0.400303 | tig0022131:-44875 | Msa1397150:CDS |
| GCTGCAATGGGAGGTGGAAC+CGG | 0.400403 | tig0022131:-42646 | Msa1397150:CDS |
| GACTGCAGGGCAGGCATTTG+AGG | 0.403656 | tig0022131:-43984 | Msa1397150:CDS |
| GCTGAGCAATTAGCTGTTGC+TGG | 0.407903 | tig0022131:-40738 | Msa1397150:CDS |
| ACTCTTAACTTGTTTGAGAA+TGG | 0.410412 | tig0022131:+43064 | None:intergenic |
| ATCGACAAAGCTGGATTTGT+TGG | 0.413314 | tig0022131:-41887 | Msa1397150:CDS |
| CTTCGAGATGTTTCGATGTA+GGG | 0.413316 | tig0022131:-42597 | Msa1397150:CDS |
| CTACCTACCGCGGACCTTCA+TGG | 0.415412 | tig0022131:-43893 | Msa1397150:CDS |
| AGAGCACCAACTGGTGGTAT+TGG | 0.417530 | tig0022131:+43869 | None:intergenic |
| AAAACTGTTGCTGCTATTTG+AGG | 0.418915 | tig0022131:+40705 | None:intergenic |
| CTGCTGTCCCAAAGCCCAAA+AGG | 0.419334 | tig0022131:+41359 | None:intergenic |
| TTGGTGGTTCTAACTATCAA+TGG | 0.424273 | tig0022131:-46042 | Msa1397150:CDS |
| ACAGCTAGGTCGATCGTTAA+TGG | 0.425372 | tig0022131:+41742 | None:intergenic |
| GTGAATATTGCTAAGGTTGA+TGG | 0.425949 | tig0022131:-43191 | Msa1397150:intron |
| GTTAGAGTCTTCATATCTTC+GGG | 0.428007 | tig0022131:+45667 | None:intergenic |
| GCTAAGTTTGATCCTGCAAC+TGG | 0.431828 | tig0022131:-42772 | Msa1397150:CDS |
| TCTCAAACTGGAGGACATCT+AGG | 0.435608 | tig0022131:-45117 | Msa1397150:CDS |
| CTTGTGGGATGTTGGCCATC+AGG | 0.437600 | tig0022131:-45025 | Msa1397150:intron |
| AGGACATCTAGGATCGAATC+TGG | 0.438050 | tig0022131:-45106 | Msa1397150:CDS |
| TAGGAGCATTGAAAACATAA+TGG | 0.438816 | tig0022131:+45058 | None:intergenic |
| CCTTCGAGATGTTTCGATGT+AGG | 0.439173 | tig0022131:-42598 | Msa1397150:CDS |
| TTCCGATTTCCACGGGCAAA+TGG | 0.439179 | tig0022131:-41719 | Msa1397150:CDS |
| GAAGCCGACAAAAGCATTGT+TGG | 0.443373 | tig0022131:-42676 | Msa1397150:CDS |
| CGAAACATCTCGAAGGGAAT+CGG | 0.443552 | tig0022131:+42605 | None:intergenic |
| TAGGAACTAAAACAACTTGC+GGG | 0.449908 | tig0022131:-45171 | Msa1397150:CDS |
| TTTCCACGGGCAAATGGAAC+TGG | 0.450138 | tig0022131:-41713 | Msa1397150:CDS |
| TTGTGCATCAGTATCCGAAA+TGG | 0.455448 | tig0022131:-45740 | Msa1397150:CDS |
| ACTGATGCACAAACCCCATA+TGG | 0.458213 | tig0022131:+45751 | None:intergenic |
| TCTTCTTGATGGAAAATTGA+AGG | 0.462055 | tig0022131:-41137 | Msa1397150:intron |
| GATACTTTACCGTATCCAAA+AGG | 0.462570 | tig0022131:+45689 | None:intergenic |
| TGTGCATCAGTATCCGAAAT+GGG | 0.464344 | tig0022131:-45739 | Msa1397150:CDS |
| GCAGTTTGGCTCAAAAGGAC+AGG | 0.469469 | tig0022131:+46097 | None:intergenic |
| TGCACGTTTCTGCAAGCCAT+TGG | 0.470257 | tig0022131:-41272 | Msa1397150:CDS |
| ACATGTTAACAGATAGGAAA+AGG | 0.470576 | tig0022131:-41412 | Msa1397150:intron |
| ACTGTGGAAGAAGGATCAAT+AGG | 0.471946 | tig0022131:-41202 | Msa1397150:CDS |
| TCAACACTATTTGAAGAACT+TGG | 0.472738 | tig0022131:-43137 | Msa1397150:CDS |
| AGGCAGAAAGATGGATTAAG+TGG | 0.473089 | tig0022131:-44834 | Msa1397150:CDS |
| AGATTTGTTATCGACAAAGC+TGG | 0.474221 | tig0022131:-41896 | Msa1397150:CDS |
| CGAAGCAGAGATTATGCATA+TGG | 0.475633 | tig0022131:-41780 | Msa1397150:CDS |
| TCCTATAGACAAAATCTTGT+GGG | 0.476226 | tig0022131:-45040 | Msa1397150:CDS |
| CTGAAACGATCAACTCCTCT+TGG | 0.478748 | tig0022131:-46061 | Msa1397150:CDS |
| GGCGGTGGGTAGAGATCTAA+AGG | 0.482790 | tig0022131:-44050 | Msa1397150:CDS |
| GAGATTTGACTGAAGATATC+CGG | 0.489301 | tig0022131:+43949 | None:intergenic |
| GACAAAATCTTGTGGGATGT+TGG | 0.491871 | tig0022131:-45033 | Msa1397150:CDS |
| AGCTCAACAACAATGTCAGC+AGG | 0.492313 | tig0022131:-44762 | Msa1397150:CDS |
| GAATTGCCACCAGGGAATAG+AGG | 0.510992 | tig0022131:-41686 | Msa1397150:CDS |
| GGATGTGATCATGGCATGAT+TGG | 0.512036 | tig0022131:-43170 | Msa1397150:CDS |
| CATAGCACCATCACCGATGA+TGG | 0.512307 | tig0022131:+44006 | None:intergenic |
| AACCTAACCTGGTTGAGTCT+GGG | 0.512700 | tig0022131:+45995 | None:intergenic |
| CCAGATATTTATATCGACCA+TGG | 0.516787 | tig0022131:-40768 | Msa1397150:CDS |
| GCAACAGCTAATTGCTCAGC+TGG | 0.516828 | tig0022131:+40741 | None:intergenic |
| TGCTGTCCCAAAGCCCAAAA+GGG | 0.518857 | tig0022131:+41360 | None:intergenic |
| AAACCTCATGTGATTTCGCT+AGG | 0.519301 | tig0022131:+41230 | None:intergenic |
| TCAATGCTATGACCATCAAC+AGG | 0.520276 | tig0022131:+43098 | None:intergenic |
| CAGTTTGGCTCAAAAGGACA+GGG | 0.521229 | tig0022131:+46098 | None:intergenic |
| CATCTACTCAGAGCACCAAC+TGG | 0.523518 | tig0022131:+43860 | None:intergenic |
| CTCCTATAGACAAAATCTTG+TGG | 0.525889 | tig0022131:-45041 | Msa1397150:CDS |
| ATACTTTACCGTATCCAAAA+GGG | 0.529734 | tig0022131:+45690 | None:intergenic |
| AGGTAAGGAGAAAACCATAT+GGG | 0.531352 | tig0022131:-45765 | Msa1397150:CDS |
| GGTACTCACATCATGCTTTG+CGG | 0.533753 | tig0022131:-42719 | Msa1397150:CDS |
| AACATACTTACCTTGACAAG+AGG | 0.534272 | tig0022131:+43812 | None:intergenic |
| TGGTGCTATGACTGCAGGGC+AGG | 0.534315 | tig0022131:-43993 | Msa1397150:CDS |
| GGTGATGGTGCTATGACTGC+AGG | 0.536641 | tig0022131:-43998 | Msa1397150:CDS |
| ACAACAATGTCAGCAGGGCT+AGG | 0.536842 | tig0022131:-44756 | Msa1397150:intron |
| AAGGTTGATGGATGTGATCA+TGG | 0.538673 | tig0022131:-43179 | Msa1397150:CDS |
| TAAATATCTGGAAACACCAT+TGG | 0.539217 | tig0022131:+40780 | None:intergenic |
| ATAATCTCTGCTTCGTCAGA+AGG | 0.540250 | tig0022131:+41788 | None:intergenic |
| AATAATGTGGTCACCATCAT+CGG | 0.543548 | tig0022131:-44019 | Msa1397150:CDS |
| CATACATTGAGGCAGAAAGA+TGG | 0.543587 | tig0022131:-44843 | Msa1397150:CDS |
| CTCTGAGTAGATGTCTCAGC+AGG | 0.543966 | tig0022131:-43850 | Msa1397150:CDS |
| TCTACCTAATATGGTGGTGA+TGG | 0.548667 | tig0022131:-41813 | Msa1397150:CDS |
| TGTGATCATGGCATGATTGG+TGG | 0.549795 | tig0022131:-43167 | Msa1397150:CDS |
| ATCTCGAAGGGAATCGGTGA+AGG | 0.551457 | tig0022131:+42611 | None:intergenic |
| ATACATGCTGCAATGGGAGG+TGG | 0.551655 | tig0022131:-42652 | Msa1397150:CDS |
| TAGGTAAGGAGAAAACCATA+TGG | 0.552253 | tig0022131:-45766 | Msa1397150:CDS |
| GAATAGAGGCATTCCTCTTG+AGG | 0.552272 | tig0022131:-41672 | Msa1397150:intron |
| ACCGTATCCAAAAGGGGTGT+AGG | 0.554410 | tig0022131:+45697 | None:intergenic |
| TCCATCAAGAAGACCATCAA+GGG | 0.555768 | tig0022131:+41147 | None:intergenic |
| ATACTCTAACTCACCTCAAG+AGG | 0.555952 | tig0022131:+41659 | None:intergenic |
| AGAGGAATGCCTCTATTCCC+TGG | 0.556815 | tig0022131:+41677 | None:intergenic |
| AAACGATCAACTCCTCTTGG+TGG | 0.558744 | tig0022131:-46058 | Msa1397150:CDS |
| CACGCTGTTACATTTGCCGC+AGG | 0.559010 | tig0022131:-42562 | Msa1397150:CDS |
| CTAGCTGTTTCCGATTTCCA+CGG | 0.559137 | tig0022131:-41727 | Msa1397150:CDS |
| TTCCATCAAGAAGACCATCA+AGG | 0.560580 | tig0022131:+41146 | None:intergenic |
| CGTGGAAATCGGAAACAGCT+AGG | 0.561026 | tig0022131:+41728 | None:intergenic |
| CTCCAGTTTGAGAAACACTC+TGG | 0.562966 | tig0022131:+45127 | None:intergenic |
| GCCGCAGGTCTAGCTTGTGA+AGG | 0.565344 | tig0022131:-42547 | Msa1397150:CDS |
| ATTGCTCAGCTGGTGATCCA+TGG | 0.566910 | tig0022131:+40751 | None:intergenic |
| TTGCAATCCCAGACTCAACC+AGG | 0.568095 | tig0022131:-46002 | Msa1397150:intron |
| GTGACAACATGGATTAGTAC+AGG | 0.569539 | tig0022131:+43026 | None:intergenic |
| GTTGGAATACATGCTGCAAT+GGG | 0.571998 | tig0022131:-42658 | Msa1397150:CDS |
| GAACTTGGACTTGACTACAT+TGG | 0.572725 | tig0022131:-43122 | Msa1397150:CDS |
| TGTTGGAATACATGCTGCAA+TGG | 0.575153 | tig0022131:-42659 | Msa1397150:CDS |
| TGGCTTGCTTGTCACGGTGG+CGG | 0.576309 | tig0022131:-41296 | Msa1397150:CDS |
| TCAAAAGAACCACAATGTGT+TGG | 0.576620 | tig0022131:+41854 | None:intergenic |
| ACTGGTGTAGAATTGCCACC+AGG | 0.577521 | tig0022131:-41695 | Msa1397150:CDS |
| TTTGAGGCAATGAATAATGC+CGG | 0.578565 | tig0022131:-43968 | Msa1397150:CDS |
| GTCATAAGCTCTCTGCAAGA+AGG | 0.579687 | tig0022131:+42495 | None:intergenic |
| CGAATGAGCGAACGGTCCAA+TGG | 0.582651 | tig0022131:+41256 | None:intergenic |
| TATCCACATAAAATACTCAC+TGG | 0.584714 | tig0022131:-44882 | Msa1397150:CDS |
| GGCAGAAAGATGGATTAAGT+GGG | 0.585018 | tig0022131:-44833 | Msa1397150:CDS |
| AGCATTGAAAACATAATGGA+GGG | 0.588745 | tig0022131:+45062 | None:intergenic |
| TAGCTGTTTCCGATTTCCAC+GGG | 0.589014 | tig0022131:-41726 | Msa1397150:CDS |
| GAGCATTGAAAACATAATGG+AGG | 0.590912 | tig0022131:+45061 | None:intergenic |
| ATCAGACAAACCTCTTGTCA+AGG | 0.591557 | tig0022131:-43822 | Msa1397150:intron |
| GAGTACCGGTGTGGGAGCCT+TGG | 0.593110 | tig0022131:+42735 | None:intergenic |
| CTTGCAGAGAGCTTATGACC+AGG | 0.594809 | tig0022131:-42491 | Msa1397150:intron |
| TTCGAAGGTGGTGCATGATG+TGG | 0.595656 | tig0022131:-41939 | Msa1397150:intron |
| TATTATCCAGTGGAGGCCAA+TGG | 0.603817 | tig0022131:-40796 | Msa1397150:intron |
| GTGGTCACCATCATCGGTGA+TGG | 0.604425 | tig0022131:-44013 | Msa1397150:CDS |
| GCCTCAATATTGCAGCAACA+TGG | 0.604435 | tig0022131:-41316 | Msa1397150:CDS |
| GCGGTGGGTAGAGATCTAAA+GGG | 0.604452 | tig0022131:-44049 | Msa1397150:CDS |
| GTAGGAACTAAAACAACTTG+CGG | 0.604690 | tig0022131:-45172 | Msa1397150:intron |
| GGACATCTAGGATCGAATCT+GGG | 0.606948 | tig0022131:-45105 | Msa1397150:CDS |
| GCCATGTTGCTGCAATATTG+AGG | 0.614726 | tig0022131:+41315 | None:intergenic |
| ACAAAGAAAGGAGGCACTAG+AGG | 0.615250 | tig0022131:-40670 | Msa1397150:CDS |
| GCAAAGCATGATGTGAGTAC+CGG | 0.615355 | tig0022131:+42721 | None:intergenic |
| GGAATAAGATGCATACATTG+AGG | 0.616684 | tig0022131:-44854 | Msa1397150:CDS |
| GCAACATGGCTTGCTTGTCA+CGG | 0.617203 | tig0022131:-41302 | Msa1397150:CDS |
| CTACATCGAAACATCTCGAA+GGG | 0.619120 | tig0022131:+42599 | None:intergenic |
| GTGAAGGAAGTGATTCATGC+CGG | 0.621432 | tig0022131:+42627 | None:intergenic |
| GCTCACCGAAGGCGAAAGAG+TGG | 0.621613 | tig0022131:-41383 | Msa1397150:CDS |
| GAAGATGGTCCAACACATTG+TGG | 0.623107 | tig0022131:-41863 | Msa1397150:CDS |
| ACAAGTATCGCTACCTACCG+CGG | 0.628279 | tig0022131:-43903 | Msa1397150:CDS |
| GTGCATCAGTATCCGAAATG+GGG | 0.629009 | tig0022131:-45738 | Msa1397150:CDS |
| TACTTTACCGTATCCAAAAG+GGG | 0.632931 | tig0022131:+45691 | None:intergenic |
| GTGGAAGAAGGATCAATAGG+AGG | 0.634607 | tig0022131:-41199 | Msa1397150:CDS |
| AAAGGAAGAATGCTCACCGA+AGG | 0.635301 | tig0022131:-41394 | Msa1397150:CDS |
| AGCAGAGATTATGCATATGG+TGG | 0.641975 | tig0022131:-41777 | Msa1397150:CDS |
| TGCATCAGTATCCGAAATGG+GGG | 0.642842 | tig0022131:-45737 | Msa1397150:CDS |
| GGACCATGAAGGTCCGCGGT+AGG | 0.644302 | tig0022131:+43890 | None:intergenic |
| ACACCAGTTCCATTTGCCCG+TGG | 0.651582 | tig0022131:+41710 | None:intergenic |
| CTGGTGTAGAATTGCCACCA+GGG | 0.652032 | tig0022131:-41694 | Msa1397150:CDS |
| CGGTGGGTAGAGATCTAAAG+GGG | 0.653145 | tig0022131:-44048 | Msa1397150:CDS |
| GGTAAGGAGAAAACCATATG+GGG | 0.656189 | tig0022131:-45764 | Msa1397150:CDS |
| CATGGTCCAATACCACCAGT+TGG | 0.657891 | tig0022131:-43875 | Msa1397150:CDS |
| CATGATGTGAGTACCGGTGT+GGG | 0.658913 | tig0022131:+42727 | None:intergenic |
| CTAGGTTGCGAATGAGCGAA+CGG | 0.661008 | tig0022131:+41248 | None:intergenic |
| CAACCTAGCGAAATCACATG+AGG | 0.664346 | tig0022131:-41233 | Msa1397150:CDS |
| CTACTCAGAGCACCAACTGG+TGG | 0.665084 | tig0022131:+43863 | None:intergenic |
| CAAGACCAAGGCTCCCACAC+CGG | 0.667838 | tig0022131:-42740 | Msa1397150:CDS |
| CCTACATCGAAACATCTCGA+AGG | 0.669459 | tig0022131:+42598 | None:intergenic |
| CAGAGTGTTTCTCAAACTGG+AGG | 0.670619 | tig0022131:-45126 | Msa1397150:CDS |
| ACATGGCTTGCTTGTCACGG+TGG | 0.671087 | tig0022131:-41299 | Msa1397150:CDS |
| GCTCAACAACAATGTCAGCA+GGG | 0.672469 | tig0022131:-44761 | Msa1397150:CDS |
| AATTCTTGGACAAAGAAAGG+AGG | 0.672979 | tig0022131:-40679 | Msa1397150:CDS |
| TGGAAAACAGTTCAAGACCA+AGG | 0.680209 | tig0022131:-42752 | Msa1397150:CDS |
| ACCTTCACAAGCTAGACCTG+CGG | 0.682356 | tig0022131:+42546 | None:intergenic |
| GTGATGGTGCTATGACTGCA+GGG | 0.687716 | tig0022131:-43997 | Msa1397150:CDS |
| GGAATACATGCTGCAATGGG+AGG | 0.692170 | tig0022131:-42655 | Msa1397150:CDS |
| CTGGTGGTATTGGACCATGA+AGG | 0.697503 | tig0022131:+43879 | None:intergenic |
| GGCATGTCTACCTAATATGG+TGG | 0.702209 | tig0022131:-41819 | Msa1397150:CDS |
| GCATGATGTGAGTACCGGTG+TGG | 0.705105 | tig0022131:+42726 | None:intergenic |
| GGAATGCCTCTATTCCCTGG+TGG | 0.706633 | tig0022131:+41680 | None:intergenic |
| TATTGGACCATGAAGGTCCG+CGG | 0.710162 | tig0022131:+43886 | None:intergenic |
| GGTGGTTCTAACTATCAATG+GGG | 0.716011 | tig0022131:-46040 | Msa1397150:CDS |
| TGATAGTTAGAACCACCAAG+AGG | 0.716360 | tig0022131:+46046 | None:intergenic |
| AAAGCAGCAGACAAGTACCA+TGG | 0.719356 | tig0022131:-42972 | Msa1397150:intron |
| GGTGGGTAGAGATCTAAAGG+GGG | 0.788838 | tig0022131:-44047 | Msa1397150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTTTGTTAAAAAAAT+AGG | + | tig0022131:41421-41440 | None:intergenic | 10.0% |
| !!! | TATTTTATTTATATAAGCTA+TGG | + | tig0022131:42098-42117 | None:intergenic | 10.0% |
| !!! | AATATAGTCAAATATTTTTT+TGG | + | tig0022131:42519-42538 | None:intergenic | 10.0% |
| !!! | ACTTTTTAAAATTTCAAATT+TGG | - | tig0022131:43321-43340 | Msa1397150:intron | 10.0% |
| !!! | ATGAGAATTTTTAAATATTT+GGG | + | tig0022131:43347-43366 | None:intergenic | 10.0% |
| !!! | AATGAGAATTTTTAAATATT+TGG | + | tig0022131:43348-43367 | None:intergenic | 10.0% |
| !! | AATACTATGTATAATATATA+AGG | - | tig0022131:44326-44345 | Msa1397150:intron | 10.0% |
| !!! | TGTATAATTTTTTTTTGAAA+AGG | - | tig0022131:44358-44377 | Msa1397150:intron | 10.0% |
| !! | AACAAAATTGAGTATAATAT+TGG | + | tig0022131:41379-41398 | None:intergenic | 15.0% |
| !!! | ATATTATACTCAATTTTGTT+TGG | - | tig0022131:41379-41398 | Msa1397150:CDS | 15.0% |
| !! | TGTAGTTAAAAATTCATAAT+TGG | + | tig0022131:41503-41522 | None:intergenic | 15.0% |
| !! | TCATGTAATAAAATTGTTAA+TGG | - | tig0022131:41537-41556 | Msa1397150:intron | 15.0% |
| !!! | TAATAAAATTGTTAATGGAT+TGG | - | tig0022131:41542-41561 | Msa1397150:intron | 15.0% |
| !! | TTTGAAAAAATCTATGTTAT+TGG | - | tig0022131:41818-41837 | Msa1397150:CDS | 15.0% |
| !!! | TTCTGATTTTATTTTTCTTT+TGG | - | tig0022131:42450-42469 | Msa1397150:intron | 15.0% |
| !! | ACATAAAAATTAGAATACTT+GGG | + | tig0022131:42494-42513 | None:intergenic | 15.0% |
| !! | TACATAAAAATTAGAATACT+TGG | + | tig0022131:42495-42514 | None:intergenic | 15.0% |
| !!! | CATAATTTGAAACTATAATA+AGG | + | tig0022131:43167-43186 | None:intergenic | 15.0% |
| !!! | TGCAATTTCTAAAAATATTA+GGG | + | tig0022131:43260-43279 | None:intergenic | 15.0% |
| !!! | TTGCAATTTCTAAAAATATT+AGG | + | tig0022131:43261-43280 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTAAAAAGTTGA+TGG | + | tig0022131:43318-43337 | None:intergenic | 15.0% |
| !! | TTATAAAGTGTAAAAGTTAT+GGG | + | tig0022131:43406-43425 | None:intergenic | 15.0% |
| !! | TTTATAAAGTGTAAAAGTTA+TGG | + | tig0022131:43407-43426 | None:intergenic | 15.0% |
| !!! | TTTAGGAAAATTAGAATTTT+AGG | + | tig0022131:43525-43544 | None:intergenic | 15.0% |
| !! | TTTAATTATACATATCTTTC+GGG | + | tig0022131:44711-44730 | None:intergenic | 15.0% |
| !! | CTTTAATTATACATATCTTT+CGG | + | tig0022131:44712-44731 | None:intergenic | 15.0% |
| !! | AAGTGAATTTATTCTAATAA+TGG | + | tig0022131:45260-45279 | None:intergenic | 15.0% |
| !!! | TATATTTAAACCAACTTGTT+TGG | - | tig0022131:40837-40856 | Msa1397150:intron | 20.0% |
| !! | AAAAAAAAAACCAAACAAGT+TGG | + | tig0022131:40850-40869 | None:intergenic | 20.0% |
| !! | ATAAGAATTTCACTATAAAC+TGG | - | tig0022131:41195-41214 | Msa1397150:CDS | 20.0% |
| !! | TAATGAACATGTAATGAATA+TGG | - | tig0022131:41226-41245 | Msa1397150:CDS | 20.0% |
| !! | AAAAAAATAGGCAATTTCTA+CGG | + | tig0022131:41409-41428 | None:intergenic | 20.0% |
| !! | CAAAAAAATGTGTAAAAACA+TGG | - | tig0022131:41431-41450 | Msa1397150:intron | 20.0% |
| !! | TCTATATCATTTATTGATGT+AGG | - | tig0022131:41593-41612 | Msa1397150:intron | 20.0% |
| !! | TATATTACACTTCAATTTGA+AGG | - | tig0022131:42326-42345 | Msa1397150:intron | 20.0% |
| !! | AGTGTTTATTATTTACCAAT+AGG | - | tig0022131:42410-42429 | Msa1397150:intron | 20.0% |
| !!! | ATATAGCTTTTGCAAAATTA+CGG | + | tig0022131:43036-43055 | None:intergenic | 20.0% |
| !!! | TTTTTTGTCAAAGATAAAGT+TGG | - | tig0022131:43140-43159 | Msa1397150:CDS | 20.0% |
| !!! | ATGTTTTAAAACATACACAT+TGG | - | tig0022131:43202-43221 | Msa1397150:intron | 20.0% |
| !!! | ATGAGGTAATTGAAAATTTT+AGG | + | tig0022131:43542-43561 | None:intergenic | 20.0% |
| !! | TAATAAGTGGTGAATTTATT+AGG | + | tig0022131:43885-43904 | None:intergenic | 20.0% |
| !! | TTAATTATACATATCTTTCG+GGG | + | tig0022131:44710-44729 | None:intergenic | 20.0% |
| !! | CTTTCTAATAATCTTCATAA+GGG | + | tig0022131:45176-45195 | None:intergenic | 20.0% |
| !! | TCTTTCTAATAATCTTCATA+AGG | + | tig0022131:45177-45196 | None:intergenic | 20.0% |
| !! | ATCTAATGCAATTATTTAGT+GGG | + | tig0022131:45287-45306 | None:intergenic | 20.0% |
| !! | AATCTAATGCAATTATTTAG+TGG | + | tig0022131:45288-45307 | None:intergenic | 20.0% |
| !!! | ATTTCTCTTTAAAACAGTTT+TGG | - | tig0022131:45321-45340 | Msa1397150:intron | 20.0% |
| !!! | TAATTTTTTTTCCTCATTGA+CGG | - | tig0022131:45850-45869 | Msa1397150:intron | 20.0% |
| !! | ATTAAACCAACTTGTTTGTT+TGG | - | tig0022131:40904-40923 | Msa1397150:intron | 25.0% |
| ! | AAAAAACCAAACAAACAAGT+TGG | + | tig0022131:40913-40932 | None:intergenic | 25.0% |
| ! | TTCCATCATTAAAATTGAGA+TGG | - | tig0022131:40950-40969 | Msa1397150:intron | 25.0% |
| ! | TCCATCATTAAAATTGAGAT+GGG | - | tig0022131:40951-40970 | Msa1397150:intron | 25.0% |
| ! | GTCTAATTATGAATGTATGT+AGG | - | tig0022131:40998-41017 | Msa1397150:intron | 25.0% |
| ! | ATTATGAATGTATGTAGGTA+AGG | - | tig0022131:41003-41022 | Msa1397150:intron | 25.0% |
| ! | TCTAACGATTAAGGTAAAAT+AGG | - | tig0022131:41133-41152 | Msa1397150:intron | 25.0% |
| ! | TTTCACTATAAACTGGTTAA+TGG | - | tig0022131:41202-41221 | Msa1397150:CDS | 25.0% |
| ! | TGTATATTTGAACACTTGAA+AGG | + | tig0022131:41273-41292 | None:intergenic | 25.0% |
| ! | AATATTGTGCTCAAATACTA+GGG | - | tig0022131:41340-41359 | Msa1397150:CDS | 25.0% |
| ! | TAAGATATCCCATATTATGA+TGG | - | tig0022131:41464-41483 | Msa1397150:intron | 25.0% |
| !! | AATTCATAATTGGCTCATAA+GGG | + | tig0022131:41493-41512 | None:intergenic | 25.0% |
| !! | AAATTCATAATTGGCTCATA+AGG | + | tig0022131:41494-41513 | None:intergenic | 25.0% |
| !!! | TTAGTACTAGTTGATTTTCT+AGG | - | tig0022131:41844-41863 | Msa1397150:CDS | 25.0% |
| !! | GTCTCTAAATATTTTGTCTT+GGG | + | tig0022131:42378-42397 | None:intergenic | 25.0% |
| !! | TGTCTCTAAATATTTTGTCT+TGG | + | tig0022131:42379-42398 | None:intergenic | 25.0% |
| ! | ACTGAAAAGATATTTCCTAT+TGG | + | tig0022131:42428-42447 | None:intergenic | 25.0% |
| ! | GCTTTATATTAATGCACAAT+TGG | - | tig0022131:42659-42678 | Msa1397150:CDS | 25.0% |
| ! | ACATCGAAGAAATTCATTTA+TGG | + | tig0022131:43060-43079 | None:intergenic | 25.0% |
| ! | TCGATGTAAAATTTACTGTT+TGG | - | tig0022131:43073-43092 | Msa1397150:CDS | 25.0% |
| ! | TACTGTTTGGATGATAAATT+TGG | - | tig0022131:43086-43105 | Msa1397150:CDS | 25.0% |
| !! | ATTCAATCAAAGCATTTGAA+TGG | - | tig0022131:43499-43518 | Msa1397150:intron | 25.0% |
| ! | ATTGAATGAGCAATAATAAG+TGG | + | tig0022131:43898-43917 | None:intergenic | 25.0% |
| ! | TAGTATTAAATTACACTACC+TGG | + | tig0022131:44313-44332 | None:intergenic | 25.0% |
| ! | TAATTATACATATCTTTCGG+GGG | + | tig0022131:44709-44728 | None:intergenic | 25.0% |
| ! | TGTTGTACAATATGCTATAT+GGG | + | tig0022131:44781-44800 | None:intergenic | 25.0% |
| ! | ATGTTGTACAATATGCTATA+TGG | + | tig0022131:44782-44801 | None:intergenic | 25.0% |
| !!! | TTCTTTTGATGTCACTTATA+TGG | - | tig0022131:44943-44962 | Msa1397150:intron | 25.0% |
| !! | TGTTGAACTTTTTACATTGA+CGG | + | tig0022131:45729-45748 | None:intergenic | 25.0% |
| !! | GATCATATTGTTTTGCAGTT+TGG | + | tig0022131:40703-40722 | None:intergenic | 30.0% |
| TTCAACAAAAAAACCTAACC+TGG | + | tig0022131:40802-40821 | None:intergenic | 30.0% | |
| !! | TCCCATCTCAATTTTAATGA+TGG | + | tig0022131:40955-40974 | None:intergenic | 30.0% |
| ATACTTTACCGTATCCAAAA+GGG | + | tig0022131:41096-41115 | None:intergenic | 30.0% | |
| TATGAAGACTCTAACGATTA+AGG | - | tig0022131:41124-41143 | Msa1397150:intron | 30.0% | |
| CAATATTGTGCTCAAATACT+AGG | - | tig0022131:41339-41358 | Msa1397150:CDS | 30.0% | |
| ATATTGTGCTCAAATACTAG+GGG | - | tig0022131:41341-41360 | Msa1397150:CDS | 30.0% | |
| ! | ATTCATAATTGGCTCATAAG+GGG | + | tig0022131:41492-41511 | None:intergenic | 30.0% |
| ! | AGCATTGAAAACATAATGGA+GGG | + | tig0022131:41724-41743 | None:intergenic | 30.0% |
| !! | TAGGAGCATTGAAAACATAA+TGG | + | tig0022131:41728-41747 | None:intergenic | 30.0% |
| TCCTATAGACAAAATCTTGT+GGG | - | tig0022131:41743-41762 | Msa1397150:CDS | 30.0% | |
| TATCCACATAAAATACTCAC+TGG | - | tig0022131:41901-41920 | Msa1397150:CDS | 30.0% | |
| ATAAAATACTCACTGGTAGA+AGG | - | tig0022131:41908-41927 | Msa1397150:CDS | 30.0% | |
| !! | GAGAGTGAATTTGATAGTTT+TGG | - | tig0022131:41988-42007 | Msa1397150:intron | 30.0% |
| TCACGAAAGCTTAAATTGTT+AGG | - | tig0022131:42584-42603 | Msa1397150:CDS | 30.0% | |
| ! | TGACATTTTACTCCAAAAAC+AGG | - | tig0022131:42707-42726 | Msa1397150:CDS | 30.0% |
| ! | TTTTACTCCAAAAACAGGAA+TGG | - | tig0022131:42712-42731 | Msa1397150:CDS | 30.0% |
| GTGTAAAAGTTATGGGATAA+AGG | + | tig0022131:43399-43418 | None:intergenic | 30.0% | |
| CTTCATTCTTAAACTTTGCT+CGG | + | tig0022131:43435-43454 | None:intergenic | 30.0% | |
| TCAACACTATTTGAAGAACT+TGG | - | tig0022131:43646-43665 | Msa1397150:intron | 30.0% | |
| !! | ACTCTTAACTTGTTTGAGAA+TGG | + | tig0022131:43722-43741 | None:intergenic | 30.0% |
| ! | TATTCCAACAATGCTTTTGT+CGG | + | tig0022131:44114-44133 | None:intergenic | 30.0% |
| GGGAAGAAAAAAATACAACA+AGG | - | tig0022131:44432-44451 | Msa1397150:intron | 30.0% | |
| !!! | ATTGGTTTTGGGTTGTTTTT+TGG | + | tig0022131:44486-44505 | None:intergenic | 30.0% |
| AAACAACCCAAAACCAATAA+AGG | - | tig0022131:44488-44507 | Msa1397150:intron | 30.0% | |
| TACAATATGCTATATGGGAT+CGG | + | tig0022131:44776-44795 | None:intergenic | 30.0% | |
| TATATTTCATGTCCATTCGA+AGG | - | tig0022131:44829-44848 | Msa1397150:CDS | 30.0% | |
| TTGTCGATAACAAATCTTAC+TGG | + | tig0022131:44884-44903 | None:intergenic | 30.0% | |
| ! | ATAAAGTATTCGTGCAGAAA+TGG | + | tig0022131:45237-45256 | None:intergenic | 30.0% |
| !! | GTTTTGACATGTTAACAGAT+AGG | - | tig0022131:45365-45384 | Msa1397150:intron | 30.0% |
| ACATGTTAACAGATAGGAAA+AGG | - | tig0022131:45371-45390 | Msa1397150:intron | 30.0% | |
| TCTTCTTGATGGAAAATTGA+AGG | - | tig0022131:45646-45665 | Msa1397150:intron | 30.0% | |
| TTGTGTTTCATATTATCCAG+TGG | - | tig0022131:45977-45996 | Msa1397150:intron | 30.0% | |
| TAAATATCTGGAAACACCAT+TGG | + | tig0022131:46006-46025 | None:intergenic | 30.0% | |
| ! | GCAACAGTTTTCAAAATTCT+TGG | - | tig0022131:46090-46109 | Msa1397150:CDS | 30.0% |
| CAAAATTCTTGGACAAAGAA+AGG | - | tig0022131:46101-46120 | Msa1397150:CDS | 30.0% | |
| !! | TTGGTGGTTCTAACTATCAA+TGG | - | tig0022131:40741-40760 | Msa1397150:CDS | 35.0% |
| !! | TGGTGGTTCTAACTATCAAT+GGG | - | tig0022131:40742-40761 | Msa1397150:CDS | 35.0% |
| TAGGTAAGGAGAAAACCATA+TGG | - | tig0022131:41017-41036 | Msa1397150:intron | 35.0% | |
| AGGTAAGGAGAAAACCATAT+GGG | - | tig0022131:41018-41037 | Msa1397150:intron | 35.0% | |
| TACTTTACCGTATCCAAAAG+GGG | + | tig0022131:41095-41114 | None:intergenic | 35.0% | |
| GATACTTTACCGTATCCAAA+AGG | + | tig0022131:41097-41116 | None:intergenic | 35.0% | |
| GTTAGAGTCTTCATATCTTC+GGG | + | tig0022131:41119-41138 | None:intergenic | 35.0% | |
| CGTTAGAGTCTTCATATCTT+CGG | + | tig0022131:41120-41139 | None:intergenic | 35.0% | |
| GAACATGTAATGAATATGGC+AGG | - | tig0022131:41230-41249 | Msa1397150:CDS | 35.0% | |
| !! | AAGGGGTACCATCATAATAT+GGG | + | tig0022131:41475-41494 | None:intergenic | 35.0% |
| !! | TAAGGGGTACCATCATAATA+TGG | + | tig0022131:41476-41495 | None:intergenic | 35.0% |
| GTAGGAACTAAAACAACTTG+CGG | - | tig0022131:41611-41630 | Msa1397150:intron | 35.0% | |
| TAGGAACTAAAACAACTTGC+GGG | - | tig0022131:41612-41631 | Msa1397150:intron | 35.0% | |
| !! | GAGCATTGAAAACATAATGG+AGG | + | tig0022131:41725-41744 | None:intergenic | 35.0% |
| CTCCTATAGACAAAATCTTG+TGG | - | tig0022131:41742-41761 | Msa1397150:CDS | 35.0% | |
| ! | TCCCACAAGATTTTGTCTAT+AGG | + | tig0022131:41747-41766 | None:intergenic | 35.0% |
| ! | TAGGAGTATAATCAACCTGA+TGG | + | tig0022131:41776-41795 | None:intergenic | 35.0% |
| ! | CTACCAGTGAGTATTTTATG+TGG | + | tig0022131:41907-41926 | None:intergenic | 35.0% |
| GGAATAAGATGCATACATTG+AGG | - | tig0022131:41929-41948 | Msa1397150:CDS | 35.0% | |
| !!! | GAATTTGATAGTTTTGGCAC+TGG | - | tig0022131:41994-42013 | Msa1397150:intron | 35.0% |
| !!! | GTTTCTAGCCAGAAATTTTC+AGG | - | tig0022131:42072-42091 | Msa1397150:intron | 35.0% |
| AATTTAAGCTTTCGTGAGAG+AGG | + | tig0022131:42581-42600 | None:intergenic | 35.0% | |
| TGCACAATTGGATTTGTGAT+CGG | - | tig0022131:42671-42690 | Msa1397150:CDS | 35.0% | |
| AATAATGTGGTCACCATCAT+CGG | - | tig0022131:42764-42783 | Msa1397150:CDS | 35.0% | |
| ! | TTTGAGGCAATGAATAATGC+CGG | - | tig0022131:42815-42834 | Msa1397150:intron | 35.0% |
| GAGATTTGACTGAAGATATC+CGG | + | tig0022131:42837-42856 | None:intergenic | 35.0% | |
| AACATACTTACCTTGACAAG+AGG | + | tig0022131:42974-42993 | None:intergenic | 35.0% | |
| TCTTGTCAAGGTAAGTATGT+TGG | - | tig0022131:42973-42992 | Msa1397150:CDS | 35.0% | |
| TTACCTCATTCAAGTACACT+CGG | - | tig0022131:43553-43572 | Msa1397150:intron | 35.0% | |
| GTGAATATTGCTAAGGTTGA+TGG | - | tig0022131:43592-43611 | Msa1397150:intron | 35.0% | |
| GTTAAGAGTCCTAAGAAAAC+TGG | - | tig0022131:43733-43752 | Msa1397150:intron | 35.0% | |
| ATCCATGTTGTCACTGAAAA+AGG | - | tig0022131:43766-43785 | Msa1397150:intron | 35.0% | |
| TGACTTTCTACTTTCATGAC+AGG | - | tig0022131:43958-43977 | Msa1397150:CDS | 35.0% | |
| !!! | CTAACATGGTTTAGTTTTGC+AGG | - | tig0022131:43984-44003 | Msa1397150:CDS | 35.0% |
| GACGAGTAAATTGCACAAAA+AGG | + | tig0022131:44269-44288 | None:intergenic | 35.0% | |
| !!! | TTTTGGGTTGTTTTTTGGTG+TGG | + | tig0022131:44481-44500 | None:intergenic | 35.0% |
| !!! | TTTTGGGTTTTTCGGTTTTG+AGG | + | tig0022131:44565-44584 | None:intergenic | 35.0% |
| AAACCGAAAAACCCAAAAAC+AGG | - | tig0022131:44567-44586 | Msa1397150:intron | 35.0% | |
| AGTGTCTTTCAGTTCTGTTT+GGG | + | tig0022131:44686-44705 | None:intergenic | 35.0% | |
| ! | AAAGCTCATTTCTTTTCACG+TGG | - | tig0022131:44728-44747 | Msa1397150:intron | 35.0% |
| ! | AAGCTCATTTCTTTTCACGT+GGG | - | tig0022131:44729-44748 | Msa1397150:intron | 35.0% |
| ACAATATGCTATATGGGATC+GGG | + | tig0022131:44775-44794 | None:intergenic | 35.0% | |
| !! | AGATTTGTTATCGACAAAGC+TGG | - | tig0022131:44887-44906 | Msa1397150:CDS | 35.0% |
| TCAAAAGAACCACAATGTGT+TGG | + | tig0022131:44932-44951 | None:intergenic | 35.0% | |
| TATGGCATGTCTACCTAATA+TGG | - | tig0022131:44961-44980 | Msa1397150:intron | 35.0% | |
| TGCATTAGATTGTGTATTGC+TGG | - | tig0022131:45297-45316 | Msa1397150:intron | 35.0% | |
| CTAAAGTCGCACAAATGATT+GGG | + | tig0022131:45768-45787 | None:intergenic | 35.0% | |
| ! | TCTAAAGTCGCACAAATGAT+TGG | + | tig0022131:45769-45788 | None:intergenic | 35.0% |
| !!! | TTTTTTTTCCTCATTGACGG+CGG | - | tig0022131:45853-45872 | Msa1397150:intron | 35.0% |
| TGTTTCATATTATCCAGTGG+AGG | - | tig0022131:45980-45999 | Msa1397150:intron | 35.0% | |
| CCATGGTCGATATAAATATC+TGG | + | tig0022131:46018-46037 | None:intergenic | 35.0% | |
| CCAGATATTTATATCGACCA+TGG | - | tig0022131:46015-46034 | Msa1397150:CDS | 35.0% | |
| ! | AAAACTGTTGCTGCTATTTG+AGG | + | tig0022131:46081-46100 | None:intergenic | 35.0% |
| AATTCTTGGACAAAGAAAGG+AGG | - | tig0022131:46104-46123 | Msa1397150:CDS | 35.0% | |
| !! | GTTTTGCAGTTTGGCTCAAA+AGG | + | tig0022131:40694-40713 | None:intergenic | 40.0% |
| TGATAGTTAGAACCACCAAG+AGG | + | tig0022131:40740-40759 | None:intergenic | 40.0% | |
| !! | GGTGGTTCTAACTATCAATG+GGG | - | tig0022131:40743-40762 | Msa1397150:CDS | 40.0% |
| GGTAAGGAGAAAACCATATG+GGG | - | tig0022131:41019-41038 | Msa1397150:intron | 40.0% | |
| TTGTGCATCAGTATCCGAAA+TGG | - | tig0022131:41043-41062 | Msa1397150:intron | 40.0% | |
| TGTGCATCAGTATCCGAAAT+GGG | - | tig0022131:41044-41063 | Msa1397150:intron | 40.0% | |
| ! | ATCCAGAGTGTTTCTCAAAC+TGG | - | tig0022131:41654-41673 | Msa1397150:intron | 40.0% |
| GACAAAATCTTGTGGGATGT+TGG | - | tig0022131:41750-41769 | Msa1397150:CDS | 40.0% | |
| ! | CTCTCTTGTGTGAATTTTGC+AGG | - | tig0022131:41876-41895 | Msa1397150:CDS | 40.0% |
| CATACATTGAGGCAGAAAGA+TGG | - | tig0022131:41940-41959 | Msa1397150:intron | 40.0% | |
| !! | AGGCAGAAAGATGGATTAAG+TGG | - | tig0022131:41949-41968 | Msa1397150:intron | 40.0% |
| !! | GGCAGAAAGATGGATTAAGT+GGG | - | tig0022131:41950-41969 | Msa1397150:intron | 40.0% |
| AGCTATGGCCTGAAAATTTC+TGG | + | tig0022131:42083-42102 | None:intergenic | 40.0% | |
| TACTCCAAAAACAGGAATGG+CGG | - | tig0022131:42715-42734 | Msa1397150:CDS | 40.0% | |
| AAAGGGGGACAACAATAATG+TGG | - | tig0022131:42751-42770 | Msa1397150:CDS | 40.0% | |
| ATCAGACAAACCTCTTGTCA+AGG | - | tig0022131:42961-42980 | Msa1397150:intron | 40.0% | |
| ! | GGTAAGTATGTTGGCTATCA+TGG | - | tig0022131:42982-43001 | Msa1397150:CDS | 40.0% |
| TTTCCGAGTGTACTTGAATG+AGG | + | tig0022131:43559-43578 | None:intergenic | 40.0% | |
| CACAGCTGTGAATATTGCTA+AGG | - | tig0022131:43585-43604 | Msa1397150:intron | 40.0% | |
| !! | AAGGTTGATGGATGTGATCA+TGG | - | tig0022131:43604-43623 | Msa1397150:intron | 40.0% |
| GAACTTGGACTTGACTACAT+TGG | - | tig0022131:43661-43680 | Msa1397150:intron | 40.0% | |
| TCAATGCTATGACCATCAAC+AGG | + | tig0022131:43688-43707 | None:intergenic | 40.0% | |
| ! | AGTACAGGACCAGTTTTCTT+AGG | + | tig0022131:43745-43764 | None:intergenic | 40.0% |
| !! | GTGACAACATGGATTAGTAC+AGG | + | tig0022131:43760-43779 | None:intergenic | 40.0% |
| !!! | TGCCTTTTTCAGTGACAACA+TGG | + | tig0022131:43771-43790 | None:intergenic | 40.0% |
| ! | GTTGTCACTGAAAAAGGCAT+AGG | - | tig0022131:43772-43791 | Msa1397150:intron | 40.0% |
| TTGTAATGCCTGTTGTACCA+TGG | + | tig0022131:43831-43850 | None:intergenic | 40.0% | |
| TTCATGACAGGCATCTAACA+TGG | - | tig0022131:43970-43989 | Msa1397150:CDS | 40.0% | |
| ! | TTGAACTGTTTTCCAGTTGC+AGG | + | tig0022131:44026-44045 | None:intergenic | 40.0% |
| TGGAAAACAGTTCAAGACCA+AGG | - | tig0022131:44031-44050 | Msa1397150:CDS | 40.0% | |
| TGTTGGAATACATGCTGCAA+TGG | - | tig0022131:44124-44143 | Msa1397150:intron | 40.0% | |
| GTTGGAATACATGCTGCAAT+GGG | - | tig0022131:44125-44144 | Msa1397150:intron | 40.0% | |
| CTACATCGAAACATCTCGAA+GGG | + | tig0022131:44187-44206 | None:intergenic | 40.0% | |
| CTTCGAGATGTTTCGATGTA+GGG | - | tig0022131:44186-44205 | Msa1397150:intron | 40.0% | |
| !! | AACAAGGTGCCGCATATATA+CGG | - | tig0022131:44448-44467 | Msa1397150:intron | 40.0% |
| !!! | TCGAGGCCTTTATTGGTTTT+GGG | + | tig0022131:44497-44516 | None:intergenic | 40.0% |
| !!! | TTCGAGGCCTTTATTGGTTT+TGG | + | tig0022131:44498-44517 | None:intergenic | 40.0% |
| !!! | CAGCCTGTTTTTGGGTTTTT+CGG | + | tig0022131:44573-44592 | None:intergenic | 40.0% |
| !! | GTTAGGTTGTGTTGCTGTTT+CGG | + | tig0022131:44646-44665 | None:intergenic | 40.0% |
| GAGTGTCTTTCAGTTCTGTT+TGG | + | tig0022131:44687-44706 | None:intergenic | 40.0% | |
| ATTTCATGTCCATTCGAAGG+TGG | - | tig0022131:44832-44851 | Msa1397150:CDS | 40.0% | |
| ATCGACAAAGCTGGATTTGT+TGG | - | tig0022131:44896-44915 | Msa1397150:intron | 40.0% | |
| ! | TCTACCTAATATGGTGGTGA+TGG | - | tig0022131:44970-44989 | Msa1397150:intron | 40.0% |
| ATAATCTCTGCTTCGTCAGA+AGG | + | tig0022131:44998-45017 | None:intergenic | 40.0% | |
| CGAAGCAGAGATTATGCATA+TGG | - | tig0022131:45003-45022 | Msa1397150:intron | 40.0% | |
| AGCAGAGATTATGCATATGG+TGG | - | tig0022131:45006-45025 | Msa1397150:intron | 40.0% | |
| ATACTCTAACTCACCTCAAG+AGG | + | tig0022131:45127-45146 | None:intergenic | 40.0% | |
| AAACCTCATGTGATTTCGCT+AGG | + | tig0022131:45556-45575 | None:intergenic | 40.0% | |
| !! | ACATGAGGTTTTGATCACTG+TGG | - | tig0022131:45565-45584 | Msa1397150:intron | 40.0% |
| !! | GTTTTGATCACTGTGGAAGA+AGG | - | tig0022131:45572-45591 | Msa1397150:intron | 40.0% |
| ACTGTGGAAGAAGGATCAAT+AGG | - | tig0022131:45581-45600 | Msa1397150:intron | 40.0% | |
| GAAGGATCAATAGGAGGATT+TGG | - | tig0022131:45590-45609 | Msa1397150:intron | 40.0% | |
| TTCTCATGTTGCTCAGTTCA+TGG | - | tig0022131:45613-45632 | Msa1397150:intron | 40.0% | |
| TCCATCAAGAAGACCATCAA+GGG | + | tig0022131:45639-45658 | None:intergenic | 40.0% | |
| TTCCATCAAGAAGACCATCA+AGG | + | tig0022131:45640-45659 | None:intergenic | 40.0% | |
| ! | CAGTTTGGCTCAAAAGGACA+GGG | + | tig0022131:40688-40707 | None:intergenic | 45.0% |
| CTGAAACGATCAACTCCTCT+TGG | - | tig0022131:40722-40741 | Msa1397150:CDS | 45.0% | |
| AAACGATCAACTCCTCTTGG+TGG | - | tig0022131:40725-40744 | Msa1397150:CDS | 45.0% | |
| AACCTAACCTGGTTGAGTCT+GGG | + | tig0022131:40791-40810 | None:intergenic | 45.0% | |
| AAACCTAACCTGGTTGAGTC+TGG | + | tig0022131:40792-40811 | None:intergenic | 45.0% | |
| ACTGATGCACAAACCCCATA+TGG | + | tig0022131:41035-41054 | None:intergenic | 45.0% | |
| GTGCATCAGTATCCGAAATG+GGG | - | tig0022131:41045-41064 | Msa1397150:intron | 45.0% | |
| TGCATCAGTATCCGAAATGG+GGG | - | tig0022131:41046-41065 | Msa1397150:intron | 45.0% | |
| CTTATACTCCTCCCCCATTT+CGG | + | tig0022131:41060-41079 | None:intergenic | 45.0% | |
| ! | GAAGAAACCTACACCCCTTT+TGG | - | tig0022131:41079-41098 | Msa1397150:intron | 45.0% |
| ! | ACCTACACCCCTTTTGGATA+CGG | - | tig0022131:41085-41104 | Msa1397150:intron | 45.0% |
| CTCCAGTTTGAGAAACACTC+TGG | + | tig0022131:41659-41678 | None:intergenic | 45.0% | |
| ! | CAGAGTGTTTCTCAAACTGG+AGG | - | tig0022131:41657-41676 | Msa1397150:intron | 45.0% |
| TCTCAAACTGGAGGACATCT+AGG | - | tig0022131:41666-41685 | Msa1397150:intron | 45.0% | |
| ! | AGGACATCTAGGATCGAATC+TGG | - | tig0022131:41677-41696 | Msa1397150:CDS | 45.0% |
| ! | GGACATCTAGGATCGAATCT+GGG | - | tig0022131:41678-41697 | Msa1397150:CDS | 45.0% |
| AGCTCAACAACAATGTCAGC+AGG | - | tig0022131:42021-42040 | Msa1397150:intron | 45.0% | |
| GCTCAACAACAATGTCAGCA+GGG | - | tig0022131:42022-42041 | Msa1397150:intron | 45.0% | |
| AGCTCAGTGTGATTTCGACA+AGG | + | tig0022131:43012-43031 | None:intergenic | 45.0% | |
| GGATGTGATCATGGCATGAT+TGG | - | tig0022131:43613-43632 | Msa1397150:intron | 45.0% | |
| TGTGATCATGGCATGATTGG+TGG | - | tig0022131:43616-43635 | Msa1397150:intron | 45.0% | |
| GACTACATTGGTCCTGTTGA+TGG | - | tig0022131:43673-43692 | Msa1397150:intron | 45.0% | |
| AAAGCAGCAGACAAGTACCA+TGG | - | tig0022131:43811-43830 | Msa1397150:intron | 45.0% | |
| GACAAGTACCATGGTACAAC+AGG | - | tig0022131:43820-43839 | Msa1397150:intron | 45.0% | |
| GCTAAGTTTGATCCTGCAAC+TGG | - | tig0022131:44011-44030 | Msa1397150:CDS | 45.0% | |
| GCAAAGCATGATGTGAGTAC+CGG | + | tig0022131:44065-44084 | None:intergenic | 45.0% | |
| GGTACTCACATCATGCTTTG+CGG | - | tig0022131:44064-44083 | Msa1397150:intron | 45.0% | |
| !! | GAAGCCGACAAAAGCATTGT+TGG | - | tig0022131:44107-44126 | Msa1397150:intron | 45.0% |
| GTGAAGGAAGTGATTCATGC+CGG | + | tig0022131:44159-44178 | None:intergenic | 45.0% | |
| CGAAACATCTCGAAGGGAAT+CGG | + | tig0022131:44181-44200 | None:intergenic | 45.0% | |
| CCTACATCGAAACATCTCGA+AGG | + | tig0022131:44188-44207 | None:intergenic | 45.0% | |
| CCTTCGAGATGTTTCGATGT+AGG | - | tig0022131:44185-44204 | Msa1397150:intron | 45.0% | |
| GTCATAAGCTCTCTGCAAGA+AGG | + | tig0022131:44291-44310 | None:intergenic | 45.0% | |
| GGTGGTGTTCCGTATATATG+CGG | + | tig0022131:44460-44479 | None:intergenic | 45.0% | |
| !!! | TGGGTTGTTTTTTGGTGTGG+TGG | + | tig0022131:44478-44497 | None:intergenic | 45.0% |
| TCGTTGTTCGAGGCCTTTAT+TGG | + | tig0022131:44504-44523 | None:intergenic | 45.0% | |
| AATAAAGGCCTCGAACAACG+AGG | - | tig0022131:44503-44522 | Msa1397150:intron | 45.0% | |
| !!! | TGGGTTTTTCGGTTTTGAGG+CGG | + | tig0022131:44562-44581 | None:intergenic | 45.0% |
| !! | TGTTTCGGTCTATTTCTGCC+TGG | + | tig0022131:44631-44650 | None:intergenic | 45.0% |
| AACACAACCTAACAGCACAG+TGG | - | tig0022131:44653-44672 | Msa1397150:intron | 45.0% | |
| !! | GCTGGATTTGTTGGAGAAGA+TGG | - | tig0022131:44905-44924 | Msa1397150:intron | 45.0% |
| GAAGATGGTCCAACACATTG+TGG | - | tig0022131:44920-44939 | Msa1397150:intron | 45.0% | |
| GGCATGTCTACCTAATATGG+TGG | - | tig0022131:44964-44983 | Msa1397150:intron | 45.0% | |
| ACAGCTAGGTCGATCGTTAA+TGG | + | tig0022131:45044-45063 | None:intergenic | 45.0% | |
| ! | CTAGCTGTTTCCGATTTCCA+CGG | - | tig0022131:45056-45075 | Msa1397150:CDS | 45.0% |
| ! | TAGCTGTTTCCGATTTCCAC+GGG | - | tig0022131:45057-45076 | Msa1397150:CDS | 45.0% |
| TTCCATTTGCCCGTGGAAAT+CGG | + | tig0022131:45069-45088 | None:intergenic | 45.0% | |
| !! | GAATAGAGGCATTCCTCTTG+AGG | - | tig0022131:45111-45130 | Msa1397150:CDS | 45.0% |
| AAAGGAAGAATGCTCACCGA+AGG | - | tig0022131:45389-45408 | Msa1397150:intron | 45.0% | |
| GCCTCAATATTGCAGCAACA+TGG | - | tig0022131:45467-45486 | Msa1397150:intron | 45.0% | |
| GCCATGTTGCTGCAATATTG+AGG | + | tig0022131:45471-45490 | None:intergenic | 45.0% | |
| CAACCTAGCGAAATCACATG+AGG | - | tig0022131:45550-45569 | Msa1397150:intron | 45.0% | |
| GTGGAAGAAGGATCAATAGG+AGG | - | tig0022131:45584-45603 | Msa1397150:intron | 45.0% | |
| TATTATCCAGTGGAGGCCAA+TGG | - | tig0022131:45987-46006 | Msa1397150:intron | 45.0% | |
| !! | ACAAAGAAAGGAGGCACTAG+AGG | - | tig0022131:46113-46132 | Msa1397150:CDS | 45.0% |
| !!! | TACATTATATATTTTTTTAA+AGG | - | tig0022131:41289-41308 | Msa1397150:CDS | 5.0% |
| !! | TTAATAATAATAACAATAAT+AGG | + | tig0022131:41795-41814 | None:intergenic | 5.0% |
| !!! | TTTTCAAAATATTAAAAATA+GGG | + | tig0022131:43290-43309 | None:intergenic | 5.0% |
| !!! | ATTTTCAAAATATTAAAAAT+AGG | + | tig0022131:43291-43310 | None:intergenic | 5.0% |
| !!! | ATTTTTAATATTTTGAAAAT+TGG | - | tig0022131:43291-43310 | Msa1397150:intron | 5.0% |
| ! | GCAGTTTGGCTCAAAAGGAC+AGG | + | tig0022131:40689-40708 | None:intergenic | 50.0% |
| TTGCAATCCCAGACTCAACC+AGG | - | tig0022131:40781-40800 | Msa1397150:CDS | 50.0% | |
| ATCCCAGACTCAACCAGGTT+AGG | - | tig0022131:40786-40805 | Msa1397150:CDS | 50.0% | |
| ATCAGTATCCGAAATGGGGG+AGG | - | tig0022131:41049-41068 | Msa1397150:intron | 50.0% | |
| ! | ACCGTATCCAAAAGGGGTGT+AGG | + | tig0022131:41089-41108 | None:intergenic | 50.0% |
| ACAACAATGTCAGCAGGGCT+AGG | - | tig0022131:42027-42046 | Msa1397150:intron | 50.0% | |
| TCCAAAAACAGGAATGGCGG+TGG | - | tig0022131:42718-42737 | Msa1397150:CDS | 50.0% | |
| CCAAAAACAGGAATGGCGGT+GGG | - | tig0022131:42719-42738 | Msa1397150:CDS | 50.0% | |
| GCGGTGGGTAGAGATCTAAA+GGG | - | tig0022131:42734-42753 | Msa1397150:CDS | 50.0% | |
| CGGTGGGTAGAGATCTAAAG+GGG | - | tig0022131:42735-42754 | Msa1397150:CDS | 50.0% | |
| GGTGGGTAGAGATCTAAAGG+GGG | - | tig0022131:42736-42755 | Msa1397150:CDS | 50.0% | |
| CATAGCACCATCACCGATGA+TGG | + | tig0022131:42780-42799 | None:intergenic | 50.0% | |
| !! | GTGATGGTGCTATGACTGCA+GGG | - | tig0022131:42786-42805 | Msa1397150:intron | 50.0% |
| ! | ACAAGTATCGCTACCTACCG+CGG | - | tig0022131:42880-42899 | Msa1397150:intron | 50.0% |
| TATTGGACCATGAAGGTCCG+CGG | + | tig0022131:42900-42919 | None:intergenic | 50.0% | |
| ! | CTGGTGGTATTGGACCATGA+AGG | + | tig0022131:42907-42926 | None:intergenic | 50.0% |
| CATGGTCCAATACCACCAGT+TGG | - | tig0022131:42908-42927 | Msa1397150:intron | 50.0% | |
| ! | AGAGCACCAACTGGTGGTAT+TGG | + | tig0022131:42917-42936 | None:intergenic | 50.0% |
| ! | CATCTACTCAGAGCACCAAC+TGG | + | tig0022131:42926-42945 | None:intergenic | 50.0% |
| CTCTGAGTAGATGTCTCAGC+AGG | - | tig0022131:42933-42952 | Msa1397150:intron | 50.0% | |
| ! | CATGGCATGATTGGTGGTTC+TGG | - | tig0022131:43622-43641 | Msa1397150:intron | 50.0% |
| !! | CATGATGTGAGTACCGGTGT+GGG | + | tig0022131:44059-44078 | None:intergenic | 50.0% |
| GGAATACATGCTGCAATGGG+AGG | - | tig0022131:44128-44147 | Msa1397150:intron | 50.0% | |
| ATACATGCTGCAATGGGAGG+TGG | - | tig0022131:44131-44150 | Msa1397150:intron | 50.0% | |
| ATCTCGAAGGGAATCGGTGA+AGG | + | tig0022131:44175-44194 | None:intergenic | 50.0% | |
| ACCTTCACAAGCTAGACCTG+CGG | + | tig0022131:44240-44259 | None:intergenic | 50.0% | |
| CTTGCAGAGAGCTTATGACC+AGG | - | tig0022131:44292-44311 | Msa1397150:intron | 50.0% | |
| CAAGACGCACAAAGAACTCG+TGG | - | tig0022131:44407-44426 | Msa1397150:intron | 50.0% | |
| ACGCACAAAGAACTCGTGGT+AGG | - | tig0022131:44411-44430 | Msa1397150:intron | 50.0% | |
| CGCACAAAGAACTCGTGGTA+GGG | - | tig0022131:44412-44431 | Msa1397150:intron | 50.0% | |
| TATTCCAGCCTCGTTGTTCG+AGG | + | tig0022131:44514-44533 | None:intergenic | 50.0% | |
| !!! | TTTTGAGGCGGTGGTATGCT+TGG | + | tig0022131:44550-44569 | None:intergenic | 50.0% |
| !!! | GTTTTTCGGTTTTGAGGCGG+TGG | + | tig0022131:44559-44578 | None:intergenic | 50.0% |
| !! | CTGTGCAGCAGCCTGTTTTT+GGG | + | tig0022131:44581-44600 | None:intergenic | 50.0% |
| !!! | GCGTGCTGCTTCTGTTGTTT+TGG | + | tig0022131:44604-44623 | None:intergenic | 50.0% |
| AACAACAGAAGCAGCACGCA+AGG | - | tig0022131:44605-44624 | Msa1397150:intron | 50.0% | |
| TATGGGATCGGGTGCATTAG+TGG | + | tig0022131:44764-44783 | None:intergenic | 50.0% | |
| CATCATGCACCACCTTCGAA+TGG | + | tig0022131:44844-44863 | None:intergenic | 50.0% | |
| TTCGAAGGTGGTGCATGATG+TGG | - | tig0022131:44844-44863 | Msa1397150:CDS | 50.0% | |
| GGAGCCATCACCACCATATT+AGG | + | tig0022131:44977-44996 | None:intergenic | 50.0% | |
| CGTGGAAATCGGAAACAGCT+AGG | + | tig0022131:45058-45077 | None:intergenic | 50.0% | |
| TTCCGATTTCCACGGGCAAA+TGG | - | tig0022131:45064-45083 | Msa1397150:CDS | 50.0% | |
| TTTCCACGGGCAAATGGAAC+TGG | - | tig0022131:45070-45089 | Msa1397150:CDS | 50.0% | |
| ACTGGTGTAGAATTGCCACC+AGG | - | tig0022131:45088-45107 | Msa1397150:CDS | 50.0% | |
| CTGGTGTAGAATTGCCACCA+GGG | - | tig0022131:45089-45108 | Msa1397150:CDS | 50.0% | |
| GAATTGCCACCAGGGAATAG+AGG | - | tig0022131:45097-45116 | Msa1397150:CDS | 50.0% | |
| AGAGGAATGCCTCTATTCCC+TGG | + | tig0022131:45109-45128 | None:intergenic | 50.0% | |
| TGCTGTCCCAAAGCCCAAAA+GGG | + | tig0022131:45426-45445 | None:intergenic | 50.0% | |
| !! | GCAACATGGCTTGCTTGTCA+CGG | - | tig0022131:45481-45500 | Msa1397150:intron | 50.0% |
| TGCACGTTTCTGCAAGCCAT+TGG | - | tig0022131:45511-45530 | Msa1397150:intron | 50.0% | |
| CTAGGTTGCGAATGAGCGAA+CGG | + | tig0022131:45538-45557 | None:intergenic | 50.0% | |
| ! | GCCCTTGATGGTCTTCTTGA+TGG | - | tig0022131:45635-45654 | Msa1397150:intron | 50.0% |
| ATTGCTCAGCTGGTGATCCA+TGG | + | tig0022131:46035-46054 | None:intergenic | 50.0% | |
| GCAACAGCTAATTGCTCAGC+TGG | + | tig0022131:46045-46064 | None:intergenic | 50.0% | |
| GCTGAGCAATTAGCTGTTGC+TGG | - | tig0022131:46045-46064 | Msa1397150:CDS | 50.0% | |
| CTTGTGGGATGTTGGCCATC+AGG | - | tig0022131:41758-41777 | Msa1397150:CDS | 55.0% | |
| ! | CCCACCGCCATTCCTGTTTT+TGG | + | tig0022131:42722-42741 | None:intergenic | 55.0% |
| GGCGGTGGGTAGAGATCTAA+AGG | - | tig0022131:42733-42752 | Msa1397150:CDS | 55.0% | |
| GTGGTCACCATCATCGGTGA+TGG | - | tig0022131:42770-42789 | Msa1397150:CDS | 55.0% | |
| !! | GGTGATGGTGCTATGACTGC+AGG | - | tig0022131:42785-42804 | Msa1397150:intron | 55.0% |
| ! | CTACTCAGAGCACCAACTGG+TGG | + | tig0022131:42923-42942 | None:intergenic | 55.0% |
| !! | GCATGATGTGAGTACCGGTG+TGG | + | tig0022131:44060-44079 | None:intergenic | 55.0% |
| CACGCTGTTACATTTGCCGC+AGG | - | tig0022131:44221-44240 | Msa1397150:intron | 55.0% | |
| ! | GCTGTGCAGCAGCCTGTTTT+TGG | + | tig0022131:44582-44601 | None:intergenic | 55.0% |
| ! | CTGCTTGCCACTGTGCTGTT+AGG | + | tig0022131:44663-44682 | None:intergenic | 55.0% |
| ACACCAGTTCCATTTGCCCG+TGG | + | tig0022131:45076-45095 | None:intergenic | 55.0% | |
| GGAATGCCTCTATTCCCTGG+TGG | + | tig0022131:45106-45125 | None:intergenic | 55.0% | |
| AAGGGCCACTCTTTCGCCTT+CGG | + | tig0022131:45408-45427 | None:intergenic | 55.0% | |
| ! | AGGCGAAAGAGTGGCCCTTT+TGG | - | tig0022131:45409-45428 | Msa1397150:intron | 55.0% |
| ! | GGCGAAAGAGTGGCCCTTTT+GGG | - | tig0022131:45410-45429 | Msa1397150:intron | 55.0% |
| ! | AGAGTGGCCCTTTTGGGCTT+TGG | - | tig0022131:45416-45435 | Msa1397150:intron | 55.0% |
| ! | GAGTGGCCCTTTTGGGCTTT+GGG | - | tig0022131:45417-45436 | Msa1397150:intron | 55.0% |
| CTGCTGTCCCAAAGCCCAAA+AGG | + | tig0022131:45427-45446 | None:intergenic | 55.0% | |
| !! | ACATGGCTTGCTTGTCACGG+TGG | - | tig0022131:45484-45503 | Msa1397150:intron | 55.0% |
| CGAATGAGCGAACGGTCCAA+TGG | + | tig0022131:45530-45549 | None:intergenic | 55.0% | |
| GCTCAGTTCATGGCCCTTGA+TGG | - | tig0022131:45623-45642 | Msa1397150:intron | 55.0% | |
| ! | GAAACACCATTGGCCTCCAC+TGG | + | tig0022131:45996-46015 | None:intergenic | 55.0% |
| !! | TGGTGCTATGACTGCAGGGC+AGG | - | tig0022131:42790-42809 | Msa1397150:intron | 60.0% |
| GACTGCAGGGCAGGCATTTG+AGG | - | tig0022131:42799-42818 | Msa1397150:intron | 60.0% | |
| CTACCTACCGCGGACCTTCA+TGG | - | tig0022131:42890-42909 | Msa1397150:intron | 60.0% | |
| CAAGACCAAGGCTCCCACAC+CGG | - | tig0022131:44043-44062 | Msa1397150:CDS | 60.0% | |
| GCTGCAATGGGAGGTGGAAC+CGG | - | tig0022131:44137-44156 | Msa1397150:intron | 60.0% | |
| ! | GCCGCAGGTCTAGCTTGTGA+AGG | - | tig0022131:44236-44255 | Msa1397150:intron | 60.0% |
| AAGGCCTCGAACAACGAGGC+TGG | - | tig0022131:44507-44526 | Msa1397150:intron | 60.0% | |
| GCTCACCGAAGGCGAAAGAG+TGG | - | tig0022131:45400-45419 | Msa1397150:intron | 60.0% | |
| !! | TGGCTTGCTTGTCACGGTGG+CGG | - | tig0022131:45487-45506 | Msa1397150:intron | 60.0% |
| CAGTGTCACCGCCGTCAATG+AGG | + | tig0022131:45864-45883 | None:intergenic | 60.0% | |
| GGACCATGAAGGTCCGCGGT+AGG | + | tig0022131:42896-42915 | None:intergenic | 65.0% | |
| !! | GAGTACCGGTGTGGGAGCCT+TGG | + | tig0022131:44051-44070 | None:intergenic | 65.0% |
| CAGAAGCAGCACGCAAGGCC+AGG | - | tig0022131:44610-44629 | Msa1397150:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022131 | gene | 40659 | 46146 | 40659 | ID=Msa1397150;Name=Msa1397150 |
| tig0022131 | mRNA | 40659 | 46146 | 40659 | ID=Msa1397150-mRNA-1;Parent=Msa1397150;Name=Msa1397150-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.22|0|1|1|1|10|0|696 |
| tig0022131 | exon | 46003 | 46146 | 46003 | ID=Msa1397150-mRNA-1:exon:15900;Parent=Msa1397150-mRNA-1 |
| tig0022131 | exon | 45660 | 45785 | 45660 | ID=Msa1397150-mRNA-1:exon:15899;Parent=Msa1397150-mRNA-1 |
| tig0022131 | exon | 45026 | 45190 | 45026 | ID=Msa1397150-mRNA-1:exon:15898;Parent=Msa1397150-mRNA-1 |
| tig0022131 | exon | 44757 | 44907 | 44757 | ID=Msa1397150-mRNA-1:exon:15897;Parent=Msa1397150-mRNA-1 |
| tig0022131 | exon | 43823 | 44076 | 43823 | ID=Msa1397150-mRNA-1:exon:15896;Parent=Msa1397150-mRNA-1 |
| tig0022131 | exon | 42973 | 43198 | 42973 | ID=Msa1397150-mRNA-1:exon:15895;Parent=Msa1397150-mRNA-1 |
| tig0022131 | exon | 42492 | 42799 | 42492 | ID=Msa1397150-mRNA-1:exon:15894;Parent=Msa1397150-mRNA-1 |
| tig0022131 | exon | 41673 | 41954 | 41673 | ID=Msa1397150-mRNA-1:exon:15893;Parent=Msa1397150-mRNA-1 |
| tig0022131 | exon | 41138 | 41422 | 41138 | ID=Msa1397150-mRNA-1:exon:15892;Parent=Msa1397150-mRNA-1 |
| tig0022131 | exon | 40659 | 40808 | 40659 | ID=Msa1397150-mRNA-1:exon:15891;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 46003 | 46146 | 46003 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 45660 | 45785 | 45660 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 45026 | 45190 | 45026 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 44757 | 44907 | 44757 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 43823 | 44076 | 43823 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 42973 | 43198 | 42973 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 42492 | 42799 | 42492 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 41673 | 41954 | 41673 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 41138 | 41422 | 41138 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| tig0022131 | CDS | 40659 | 40808 | 40659 | ID=Msa1397150-mRNA-1:cds;Parent=Msa1397150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
