Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150370 | KEH23018.1 | 68.310 | 284 | 73 | 2 | 23 | 303 | 1 | 270 | 2.47e-123 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150370 | A0A072U1I9 | 68.310 | 284 | 73 | 2 | 23 | 303 | 1 | 270 | 1.18e-123 | 371 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013750 | Msa1150370 | 0.823281 | 1.506885e-53 | -8.615850e-47 |
| Msa0015750 | Msa1150370 | 0.821791 | 3.345869e-53 | -8.615850e-47 |
| Msa0016570 | Msa1150370 | 0.845271 | 4.507675e-59 | -8.615850e-47 |
| Msa0016580 | Msa1150370 | 0.816171 | 6.344308e-52 | -8.615850e-47 |
| Msa0092630 | Msa1150370 | 0.809579 | 1.765152e-50 | -8.615850e-47 |
| Msa0102070 | Msa1150370 | 0.851792 | 7.045759e-61 | -8.615850e-47 |
| Msa0110270 | Msa1150370 | 0.801382 | 9.244872e-49 | -8.615850e-47 |
| Msa0111510 | Msa1150370 | 0.820284 | 7.439990e-53 | -8.615850e-47 |
| Msa0604350 | Msa1150370 | 0.822660 | 2.103805e-53 | -8.615850e-47 |
| Msa0636170 | Msa1150370 | 0.838766 | 2.365627e-57 | -8.615850e-47 |
| Msa0639610 | Msa1150370 | 0.801481 | 8.821272e-49 | -8.615850e-47 |
| Msa0678930 | Msa1150370 | 0.821254 | 4.451908e-53 | -8.615850e-47 |
| Msa0694370 | Msa1150370 | 0.848778 | 4.933412e-60 | -8.615850e-47 |
| Msa0703120 | Msa1150370 | 0.806233 | 9.086201e-50 | -8.615850e-47 |
| Msa0725850 | Msa1150370 | 0.813671 | 2.274963e-51 | -8.615850e-47 |
| Msa0726140 | Msa1150370 | 0.864122 | 1.526360e-64 | -8.615850e-47 |
| Msa0729800 | Msa1150370 | 0.847630 | 1.024179e-59 | -8.615850e-47 |
| Msa0731560 | Msa1150370 | 0.821475 | 3.958191e-53 | -8.615850e-47 |
| Msa0732310 | Msa1150370 | 0.801754 | 7.754379e-49 | -8.615850e-47 |
| Msa0733290 | Msa1150370 | 0.848274 | 6.802981e-60 | -8.615850e-47 |
| Msa0735080 | Msa1150370 | 0.820834 | 5.563905e-53 | -8.615850e-47 |
| Msa0741990 | Msa1150370 | 0.811849 | 5.697446e-51 | -8.615850e-47 |
| Msa0743810 | Msa1150370 | 0.894417 | 2.515645e-75 | -8.615850e-47 |
| Msa0745060 | Msa1150370 | 0.863091 | 3.188041e-64 | -8.615850e-47 |
| Msa0767720 | Msa1150370 | 0.822084 | 2.862374e-53 | -8.615850e-47 |
| Msa0768290 | Msa1150370 | 0.823629 | 1.249530e-53 | -8.615850e-47 |
| Msa0768370 | Msa1150370 | 0.820159 | 7.949021e-53 | -8.615850e-47 |
| Msa0777870 | Msa1150370 | 0.808638 | 2.807600e-50 | -8.615850e-47 |
| Msa0783160 | Msa1150370 | 0.869286 | 3.469939e-66 | -8.615850e-47 |
| Msa0784290 | Msa1150370 | 0.830037 | 3.680560e-55 | -8.615850e-47 |
| Msa0784300 | Msa1150370 | 0.813472 | 2.515480e-51 | -8.615850e-47 |
| Msa0787600 | Msa1150370 | 0.852089 | 5.801828e-61 | -8.615850e-47 |
| Msa0808010 | Msa1150370 | 0.862645 | 4.377203e-64 | -8.615850e-47 |
| Msa0808020 | Msa1150370 | 0.851771 | 7.143434e-61 | -8.615850e-47 |
| Msa0824600 | Msa1150370 | 0.804783 | 1.829864e-49 | -8.615850e-47 |
| Msa0825860 | Msa1150370 | 0.873039 | 2.001545e-67 | -8.615850e-47 |
| Msa0833290 | Msa1150370 | 0.852958 | 3.279312e-61 | -8.615850e-47 |
| Msa0123810 | Msa1150370 | 0.820057 | 8.386989e-53 | -8.615850e-47 |
| Msa0142220 | Msa1150370 | 0.823078 | 1.680827e-53 | -8.615850e-47 |
| Msa0145750 | Msa1150370 | 0.871868 | 4.923967e-67 | -8.615850e-47 |
| Msa0153910 | Msa1150370 | 0.837901 | 3.953436e-57 | -8.615850e-47 |
| Msa0200000 | Msa1150370 | 0.851701 | 7.478293e-61 | -8.615850e-47 |
| Msa0227480 | Msa1150370 | 0.857431 | 1.640241e-62 | -8.615850e-47 |
| Msa0231000 | Msa1150370 | 0.813366 | 2.655132e-51 | -8.615850e-47 |
| Msa0232850 | Msa1150370 | 0.824998 | 5.956365e-54 | -8.615850e-47 |
| Msa0235140 | Msa1150370 | 0.816974 | 4.194017e-52 | -8.615850e-47 |
| Msa0365500 | Msa1150370 | 0.838804 | 2.312993e-57 | -8.615850e-47 |
| Msa0384800 | Msa1150370 | 0.838870 | 2.224115e-57 | -8.615850e-47 |
| Msa0394970 | Msa1150370 | 0.822617 | 2.151841e-53 | -8.615850e-47 |
| Msa0402290 | Msa1150370 | 0.812780 | 3.569142e-51 | -8.615850e-47 |
| Msa0406120 | Msa1150370 | 0.828897 | 6.961242e-55 | -8.615850e-47 |
| Msa0407750 | Msa1150370 | 0.800384 | 1.478312e-48 | -8.615850e-47 |
| Msa0414410 | Msa1150370 | 0.863625 | 2.178074e-64 | -8.615850e-47 |
| Msa0414420 | Msa1150370 | 0.892024 | 2.323534e-74 | -8.615850e-47 |
| Msa0417100 | Msa1150370 | 0.800660 | 1.298767e-48 | -8.615850e-47 |
| Msa0430420 | Msa1150370 | 0.800145 | 1.653734e-48 | -8.615850e-47 |
| Msa0436780 | Msa1150370 | 0.822185 | 2.711713e-53 | -8.615850e-47 |
| Msa0438620 | Msa1150370 | 0.828929 | 6.841829e-55 | -8.615850e-47 |
| Msa0450000 | Msa1150370 | 0.837916 | 3.919407e-57 | -8.615850e-47 |
| Msa0451730 | Msa1150370 | 0.803098 | 4.099491e-49 | -8.615850e-47 |
| Msa0452900 | Msa1150370 | 0.893847 | 4.290947e-75 | -8.615850e-47 |
| Msa0452910 | Msa1150370 | 0.804845 | 1.776672e-49 | -8.615850e-47 |
| Msa0453120 | Msa1150370 | 0.833036 | 6.716417e-56 | -8.615850e-47 |
| Msa0454370 | Msa1150370 | 0.861793 | 7.994074e-64 | -8.615850e-47 |
| Msa0454910 | Msa1150370 | 0.833879 | 4.137548e-56 | -8.615850e-47 |
| Msa0459160 | Msa1150370 | 0.840162 | 1.026425e-57 | -8.615850e-47 |
| Msa0459170 | Msa1150370 | 0.836669 | 8.173871e-57 | -8.615850e-47 |
| Msa0981270 | Msa1150370 | 0.803478 | 3.420532e-49 | -8.615850e-47 |
| Msa0981370 | Msa1150370 | 0.832453 | 9.373252e-56 | -8.615850e-47 |
| Msa0986400 | Msa1150370 | 0.814209 | 1.730770e-51 | -8.615850e-47 |
| Msa0989060 | Msa1150370 | 0.858957 | 5.765824e-63 | -8.615850e-47 |
| Msa0998690 | Msa1150370 | 0.802498 | 5.453763e-49 | -8.615850e-47 |
| Msa1016280 | Msa1150370 | 0.894009 | 3.688772e-75 | -8.615850e-47 |
| Msa1023050 | Msa1150370 | 0.805902 | 1.066670e-49 | -8.615850e-47 |
| Msa1024240 | Msa1150370 | 0.853866 | 1.800160e-61 | -8.615850e-47 |
| Msa1025360 | Msa1150370 | 0.891186 | 4.996969e-74 | -8.615850e-47 |
| Msa1025370 | Msa1150370 | 0.905695 | 3.271873e-80 | -8.615850e-47 |
| Msa1030060 | Msa1150370 | 0.801349 | 9.389256e-49 | -8.615850e-47 |
| Msa1044830 | Msa1150370 | 0.905172 | 5.682125e-80 | -8.615850e-47 |
| Msa1044840 | Msa1150370 | 0.893787 | 4.539799e-75 | -8.615850e-47 |
| Msa1060840 | Msa1150370 | 0.869055 | 4.122682e-66 | -8.615850e-47 |
| Msa1092990 | Msa1150370 | 0.856942 | 2.287226e-62 | -8.615850e-47 |
| Msa1100980 | Msa1150370 | 0.863038 | 3.310788e-64 | -8.615850e-47 |
| Msa0267000 | Msa1150370 | 0.896445 | 3.663041e-76 | -8.615850e-47 |
| Msa0267010 | Msa1150370 | 0.890610 | 8.434984e-74 | -8.615850e-47 |
| Msa0295770 | Msa1150370 | 0.807239 | 5.571537e-50 | -8.615850e-47 |
| Msa0304170 | Msa1150370 | 0.835644 | 1.488206e-56 | -8.615850e-47 |
| Msa0306460 | Msa1150370 | 0.807391 | 5.172358e-50 | -8.615850e-47 |
| Msa0313760 | Msa1150370 | 0.834526 | 2.848949e-56 | -8.615850e-47 |
| Msa0342240 | Msa1150370 | 0.873320 | 1.611549e-67 | -8.615850e-47 |
| Msa0355220 | Msa1150370 | 0.810760 | 9.819465e-51 | -8.615850e-47 |
| Msa0360510 | Msa1150370 | 0.859354 | 4.384181e-63 | -8.615850e-47 |
| Msa0363300 | Msa1150370 | 0.801695 | 7.975342e-49 | -8.615850e-47 |
| Msa1109440 | Msa1150370 | 0.872453 | 3.143354e-67 | -8.615850e-47 |
| Msa1111150 | Msa1150370 | 0.812466 | 4.180077e-51 | -8.615850e-47 |
| Msa1117150 | Msa1150370 | 0.805858 | 1.089747e-49 | -8.615850e-47 |
| Msa1121200 | Msa1150370 | 0.852948 | 3.301765e-61 | -8.615850e-47 |
| Msa1121480 | Msa1150370 | 0.828878 | 7.038117e-55 | -8.615850e-47 |
| Msa1121490 | Msa1150370 | 0.801703 | 7.946438e-49 | -8.615850e-47 |
| Msa1135740 | Msa1150370 | 0.843445 | 1.395018e-58 | -8.615850e-47 |
| Msa1136090 | Msa1150370 | 0.810635 | 1.045305e-50 | -8.615850e-47 |
| Msa1146110 | Msa1150370 | 0.861960 | 7.103920e-64 | -8.615850e-47 |
| Msa1149360 | Msa1150370 | 0.840584 | 7.965178e-58 | -8.615850e-47 |
| Msa1150370 | Msa1150640 | 0.825035 | 5.837398e-54 | -8.615850e-47 |
| Msa1150370 | Msa1173920 | 0.838731 | 2.415351e-57 | -8.615850e-47 |
| Msa1150370 | Msa1178340 | 0.801967 | 7.012641e-49 | -8.615850e-47 |
| Msa1150370 | Msa1182090 | 0.815075 | 1.113122e-51 | -8.615850e-47 |
| Msa1150370 | Msa1184420 | 0.812213 | 4.747553e-51 | -8.615850e-47 |
| Msa1150370 | Msa1187940 | 0.873742 | 1.161336e-67 | -8.615850e-47 |
| Msa1150370 | Msa1187950 | 0.830712 | 2.516356e-55 | -8.615850e-47 |
| Msa1150370 | Msa1192640 | 0.867294 | 1.522181e-65 | -8.615850e-47 |
| Msa1150370 | Msa1230430 | 0.827616 | 1.417659e-54 | -8.615850e-47 |
| Msa1150370 | Msa1246880 | 0.828961 | 6.720018e-55 | -8.615850e-47 |
| Msa1150370 | Msa1248300 | 0.816089 | 6.616883e-52 | -8.615850e-47 |
| Msa1150370 | Msa1248310 | 0.816961 | 4.220828e-52 | -8.615850e-47 |
| Msa1150370 | Msa1248370 | 0.811184 | 7.949222e-51 | -8.615850e-47 |
| Msa1150370 | Msa1260100 | 0.801840 | 7.447665e-49 | -8.615850e-47 |
| Msa1150370 | Msa1269670 | 0.857768 | 1.303460e-62 | -8.615850e-47 |
| Msa1150370 | Msa1270230 | 0.879899 | 8.547380e-70 | -8.615850e-47 |
| Msa1150370 | Msa1270240 | 0.847516 | 1.100428e-59 | -8.615850e-47 |
| Msa1150370 | Msa1270270 | 0.865298 | 6.536910e-65 | -8.615850e-47 |
| Msa1150370 | Msa1273230 | 0.832226 | 1.066452e-55 | -8.615850e-47 |
| Msa1150370 | Msa1283330 | 0.858828 | 6.299679e-63 | -8.615850e-47 |
| Msa1150370 | Msa1285930 | 0.878761 | 2.162492e-69 | -8.615850e-47 |
| Msa1150370 | Msa1287800 | 0.889012 | 3.545422e-73 | -8.615850e-47 |
| Msa1150370 | Msa1287810 | 0.901148 | 3.590162e-78 | -8.615850e-47 |
| Msa1150370 | Msa1287820 | 0.802108 | 6.560321e-49 | -8.615850e-47 |
| Msa1150370 | Msa1287830 | 0.842592 | 2.353212e-58 | -8.615850e-47 |
| Msa1150370 | Msa1288560 | 0.814795 | 1.284190e-51 | -8.615850e-47 |
| Msa1150370 | Msa1289420 | 0.837516 | 4.964011e-57 | -8.615850e-47 |
| Msa1150370 | Msa1289430 | 0.869946 | 2.113988e-66 | -8.615850e-47 |
| Msa1150370 | Msa1297210 | 0.820869 | 5.461807e-53 | -8.615850e-47 |
| Msa1150370 | Msa1305480 | 0.800270 | 1.559371e-48 | -8.615850e-47 |
| Msa1150370 | Msa1307890 | 0.852864 | 3.488870e-61 | -8.615850e-47 |
| Msa1150370 | Msa1310120 | 0.832163 | 1.105909e-55 | -8.615850e-47 |
| Msa1150370 | Msa1320300 | 0.852185 | 5.448713e-61 | -8.615850e-47 |
| Msa1150370 | Msa1340590 | 0.861039 | 1.357149e-63 | -8.615850e-47 |
| Msa1150370 | Msa1342200 | 0.809422 | 1.906968e-50 | -8.615850e-47 |
| Msa1150370 | Msa1344520 | 0.810587 | 1.070101e-50 | -8.615850e-47 |
| Msa1150370 | Msa1369430 | 0.822773 | 1.979985e-53 | -8.615850e-47 |
| Msa1150370 | Msa1397150 | 0.809750 | 1.621706e-50 | -8.615850e-47 |
| Msa1150370 | Msa1397580 | 0.860723 | 1.693559e-63 | -8.615850e-47 |
| Msa1150370 | Msa1400720 | 0.803315 | 3.697047e-49 | -8.615850e-47 |
| Msa1150370 | Msa1402790 | 0.819147 | 1.353161e-52 | -8.615850e-47 |
| Msa1150370 | Msa1404000 | 0.864675 | 1.024818e-64 | -8.615850e-47 |
| Msa1150370 | Msa1408780 | 0.818889 | 1.548482e-52 | -8.615850e-47 |
| Msa1150370 | Msa1415310 | 0.855326 | 6.800819e-62 | -8.615850e-47 |
| Msa1150370 | Msa1422180 | 0.866247 | 3.277373e-65 | -8.615850e-47 |
| Msa1150370 | Msa1433120 | 0.843845 | 1.090653e-58 | -8.615850e-47 |
| Msa1150370 | Msa1451570 | 0.813903 | 2.022467e-51 | -8.615850e-47 |
| Msa0485030 | Msa1150370 | 0.815742 | 7.910175e-52 | -8.615850e-47 |
| Msa0491590 | Msa1150370 | 0.877607 | 5.487887e-69 | -8.615850e-47 |
| Msa0502760 | Msa1150370 | 0.816669 | 4.908622e-52 | -8.615850e-47 |
| Msa0506270 | Msa1150370 | 0.825717 | 4.024459e-54 | -8.615850e-47 |
| Msa0534540 | Msa1150370 | 0.816507 | 5.335796e-52 | -8.615850e-47 |
| Msa0564890 | Msa1150370 | 0.889048 | 3.430684e-73 | -8.615850e-47 |
| Msa0596150 | Msa1150370 | 0.842278 | 2.851413e-58 | -8.615850e-47 |
| Msa0598780 | Msa1150370 | 0.801487 | 8.798612e-49 | -8.615850e-47 |
| Msa0846210 | Msa1150370 | 0.817455 | 3.268297e-52 | -8.615850e-47 |
| Msa0846330 | Msa1150370 | 0.834846 | 2.365994e-56 | -8.615850e-47 |
| Msa0846350 | Msa1150370 | 0.844056 | 9.574443e-59 | -8.615850e-47 |
| Msa0848960 | Msa1150370 | 0.835219 | 1.905508e-56 | -8.615850e-47 |
| Msa0854980 | Msa1150370 | 0.815688 | 8.132676e-52 | -8.615850e-47 |
| Msa0858980 | Msa1150370 | 0.831071 | 2.054458e-55 | -8.615850e-47 |
| Msa0865320 | Msa1150370 | 0.851296 | 9.735795e-61 | -8.615850e-47 |
| Msa0872230 | Msa1150370 | 0.819355 | 1.213016e-52 | -8.615850e-47 |
| Msa0884150 | Msa1150370 | 0.809919 | 1.491178e-50 | -8.615850e-47 |
| Msa0885280 | Msa1150370 | 0.803485 | 3.409377e-49 | -8.615850e-47 |
| Msa0885290 | Msa1150370 | 0.848924 | 4.494871e-60 | -8.615850e-47 |
| Msa0887920 | Msa1150370 | 0.808088 | 3.677616e-50 | -8.615850e-47 |
| Msa0888370 | Msa1150370 | 0.867740 | 1.095376e-65 | -8.615850e-47 |
| Msa0888420 | Msa1150370 | 0.846000 | 2.858794e-59 | -8.615850e-47 |
| Msa0899430 | Msa1150370 | 0.812474 | 4.162563e-51 | -8.615850e-47 |
| Msa0899450 | Msa1150370 | 0.815144 | 1.074503e-51 | -8.615850e-47 |
| Msa0907260 | Msa1150370 | 0.820617 | 6.238678e-53 | -8.615850e-47 |
| Msa0914760 | Msa1150370 | 0.815878 | 7.375754e-52 | -8.615850e-47 |
| Msa0952720 | Msa1150370 | 0.818661 | 1.745035e-52 | -8.615850e-47 |
| Msa0956270 | Msa1150370 | 0.820820 | 5.605315e-53 | -8.615850e-47 |
| Msa0957680 | Msa1150370 | 0.822472 | 2.325932e-53 | -8.615850e-47 |
| Msa0958550 | Msa1150370 | 0.818891 | 1.547302e-52 | -8.615850e-47 |
| Msa0974870 | Msa1150370 | 0.800983 | 1.115497e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150370 | MtrunA17_Chr7g0239891 | 62.620 | 313 | 80 | 5 | 23 | 303 | 1 | 308 | 2.92e-120 | 354 |
| Msa1150370 | MtrunA17_Chr7g0239891 | 28.194 | 227 | 134 | 9 | 34 | 248 | 285 | 494 | 5.39e-12 | 66.2 |
| Msa1150370 | MtrunA17_Chr7g0238971 | 56.228 | 281 | 113 | 5 | 27 | 303 | 6 | 280 | 3.07e-97 | 294 |
| Msa1150370 | MtrunA17_Chr7g0238971 | 28.821 | 229 | 131 | 8 | 34 | 248 | 257 | 467 | 1.32e-14 | 73.9 |
| Msa1150370 | MtrunA17_Chr7g0239921 | 55.000 | 300 | 122 | 5 | 12 | 303 | 11 | 305 | 6.36e-97 | 294 |
| Msa1150370 | MtrunA17_Chr7g0239911 | 56.738 | 282 | 114 | 4 | 24 | 303 | 1 | 276 | 6.27e-96 | 291 |
| Msa1150370 | MtrunA17_Chr7g0239861 | 68.142 | 226 | 38 | 4 | 89 | 303 | 4 | 206 | 5.19e-95 | 286 |
| Msa1150370 | MtrunA17_Chr7g0238961 | 53.947 | 304 | 111 | 5 | 23 | 303 | 256 | 553 | 6.27e-95 | 296 |
| Msa1150370 | MtrunA17_Chr7g0238961 | 54.878 | 164 | 71 | 2 | 26 | 186 | 2 | 165 | 1.56e-54 | 189 |
| Msa1150370 | MtrunA17_Chr7g0238961 | 29.075 | 227 | 135 | 6 | 34 | 248 | 530 | 742 | 7.97e-15 | 75.1 |
| Msa1150370 | MtrunA17_Chr7g0239731 | 54.676 | 278 | 117 | 3 | 26 | 301 | 2 | 272 | 1.11e-94 | 288 |
| Msa1150370 | MtrunA17_Chr7g0239731 | 29.572 | 257 | 145 | 8 | 2 | 247 | 233 | 464 | 7.21e-19 | 86.7 |
| Msa1150370 | MtrunA17_Chr7g0239841 | 54.804 | 281 | 119 | 6 | 24 | 301 | 1 | 276 | 1.98e-90 | 276 |
| Msa1150370 | MtrunA17_Chr7g0239851 | 57.143 | 280 | 109 | 6 | 26 | 300 | 2 | 275 | 2.08e-89 | 274 |
| Msa1150370 | MtrunA17_Chr7g0239851 | 26.754 | 228 | 137 | 8 | 34 | 248 | 255 | 465 | 1.29e-12 | 67.8 |
| Msa1150370 | MtrunA17_Chr7g0239901 | 55.914 | 279 | 114 | 5 | 25 | 301 | 30 | 301 | 9.06e-89 | 274 |
| Msa1150370 | MtrunA17_Chr3g0078631 | 54.639 | 291 | 110 | 7 | 20 | 303 | 6 | 281 | 4.04e-86 | 265 |
| Msa1150370 | MtrunA17_Chr7g0239831 | 51.877 | 293 | 113 | 7 | 24 | 303 | 1 | 278 | 5.27e-81 | 253 |
| Msa1150370 | MtrunA17_Chr7g0239761 | 47.535 | 284 | 116 | 5 | 21 | 303 | 17 | 268 | 5.57e-69 | 216 |
| Msa1150370 | MtrunA17_Chr7g0241421 | 41.319 | 288 | 154 | 6 | 20 | 301 | 1 | 279 | 4.77e-60 | 201 |
| Msa1150370 | MtrunA17_Chr7g0239751 | 52.358 | 212 | 83 | 4 | 31 | 236 | 30 | 229 | 5.25e-58 | 186 |
| Msa1150370 | MtrunA17_Chr7g0241251 | 41.463 | 287 | 155 | 7 | 26 | 303 | 5 | 287 | 7.41e-57 | 189 |
| Msa1150370 | MtrunA17_Chr7g0241271 | 40.767 | 287 | 157 | 5 | 27 | 303 | 8 | 291 | 4.84e-50 | 168 |
| Msa1150370 | MtrunA17_Chr7g0241261 | 39.510 | 286 | 152 | 7 | 26 | 303 | 2 | 274 | 1.16e-49 | 170 |
| Msa1150370 | MtrunA17_Chr7g0241431 | 40.074 | 272 | 128 | 5 | 39 | 303 | 1 | 244 | 3.63e-49 | 169 |
| Msa1150370 | MtrunA17_Chr7g0241431 | 27.039 | 233 | 145 | 8 | 34 | 249 | 221 | 445 | 6.66e-12 | 65.9 |
| Msa1150370 | MtrunA17_Chr7g0241161 | 39.041 | 292 | 127 | 6 | 24 | 303 | 6 | 258 | 1.88e-48 | 167 |
| Msa1150370 | MtrunA17_Chr7g0241161 | 26.457 | 223 | 134 | 7 | 27 | 248 | 228 | 421 | 4.65e-12 | 66.2 |
| Msa1150370 | MtrunA17_Chr7g0241201 | 38.832 | 291 | 164 | 6 | 23 | 303 | 5 | 291 | 2.97e-48 | 165 |
| Msa1150370 | MtrunA17_Chr7g0241331 | 38.849 | 278 | 157 | 6 | 34 | 301 | 5 | 279 | 8.70e-48 | 167 |
| Msa1150370 | MtrunA17_Chr7g0237451 | 38.112 | 286 | 147 | 7 | 25 | 301 | 4 | 268 | 1.11e-46 | 163 |
| Msa1150370 | MtrunA17_Chr7g0237451 | 24.066 | 241 | 162 | 7 | 20 | 248 | 233 | 464 | 9.97e-11 | 62.4 |
| Msa1150370 | MtrunA17_Chr7g0241361 | 42.342 | 222 | 105 | 3 | 34 | 253 | 17 | 217 | 2.53e-46 | 157 |
| Msa1150370 | MtrunA17_Chr1g0166321 | 37.671 | 292 | 152 | 10 | 34 | 301 | 15 | 300 | 1.57e-44 | 158 |
| Msa1150370 | MtrunA17_Chr4g0008511 | 34.589 | 292 | 169 | 5 | 27 | 301 | 2 | 288 | 2.57e-42 | 152 |
| Msa1150370 | MtrunA17_Chr7g0241311 | 37.850 | 214 | 125 | 2 | 24 | 229 | 1 | 214 | 1.11e-40 | 141 |
| Msa1150370 | MtrunA17_Chr7g0218371 | 34.375 | 288 | 135 | 6 | 20 | 301 | 1 | 240 | 8.88e-40 | 144 |
| Msa1150370 | MtrunA17_Chr7g0241351 | 40.887 | 203 | 111 | 4 | 34 | 232 | 17 | 214 | 3.14e-39 | 137 |
| Msa1150370 | MtrunA17_Chr2g0291981 | 52.586 | 116 | 55 | 0 | 27 | 142 | 8 | 123 | 2.93e-36 | 127 |
| Msa1150370 | MtrunA17_Chr7g0241231 | 48.227 | 141 | 71 | 1 | 32 | 170 | 6 | 146 | 3.43e-33 | 119 |
| Msa1150370 | MtrunA17_Chr4g0007341 | 32.026 | 306 | 166 | 11 | 23 | 301 | 1 | 291 | 1.81e-32 | 125 |
| Msa1150370 | MtrunA17_Chr4g0007631 | 32.432 | 296 | 165 | 12 | 24 | 296 | 1 | 284 | 3.14e-30 | 119 |
| Msa1150370 | MtrunA17_Chr4g0007631 | 28.800 | 250 | 145 | 9 | 21 | 247 | 255 | 494 | 3.43e-13 | 69.7 |
| Msa1150370 | MtrunA17_Chr4g0008481 | 31.788 | 302 | 163 | 9 | 26 | 296 | 2 | 291 | 6.71e-30 | 118 |
| Msa1150370 | MtrunA17_Chr4g0008481 | 27.917 | 240 | 128 | 9 | 36 | 247 | 277 | 499 | 6.14e-12 | 65.9 |
| Msa1150370 | MtrunA17_Chr4g0007231 | 33.190 | 232 | 124 | 7 | 26 | 233 | 2 | 226 | 6.80e-30 | 113 |
| Msa1150370 | MtrunA17_Chr1g0150201 | 43.919 | 148 | 77 | 4 | 112 | 255 | 1 | 146 | 3.56e-29 | 109 |
| Msa1150370 | MtrunA17_Chr3g0110221 | 37.500 | 192 | 82 | 4 | 112 | 301 | 1 | 156 | 1.84e-28 | 112 |
| Msa1150370 | MtrunA17_Chr4g0007251 | 30.453 | 243 | 130 | 6 | 27 | 256 | 8 | 224 | 1.12e-25 | 106 |
| Msa1150370 | MtrunA17_Chr4g0007251 | 28.509 | 228 | 138 | 9 | 36 | 247 | 251 | 469 | 2.17e-11 | 64.3 |
| Msa1150370 | MtrunA17_Chr4g0007271 | 28.522 | 291 | 157 | 7 | 26 | 301 | 2 | 256 | 1.49e-25 | 105 |
| Msa1150370 | MtrunA17_Chr4g0007271 | 25.630 | 238 | 144 | 8 | 34 | 247 | 235 | 463 | 4.48e-12 | 66.2 |
| Msa1150370 | MtrunA17_Chr8g0355351 | 30.328 | 244 | 138 | 9 | 28 | 253 | 8 | 237 | 5.13e-24 | 97.8 |
| Msa1150370 | MtrunA17_Chr1g0212741 | 30.165 | 242 | 150 | 6 | 25 | 253 | 3 | 238 | 1.13e-23 | 97.1 |
| Msa1150370 | MtrunA17_Chr7g0229201 | 30.364 | 247 | 145 | 8 | 24 | 253 | 1 | 237 | 2.71e-21 | 90.5 |
| Msa1150370 | MtrunA17_Chr0c02g0489781 | 30.364 | 247 | 145 | 8 | 24 | 253 | 1 | 237 | 2.71e-21 | 90.5 |
| Msa1150370 | MtrunA17_Chr7g0239791 | 55.319 | 94 | 38 | 1 | 210 | 303 | 3 | 92 | 4.40e-20 | 88.2 |
| Msa1150370 | MtrunA17_Chr7g0239791 | 29.958 | 237 | 141 | 8 | 14 | 248 | 52 | 265 | 3.15e-18 | 82.8 |
| Msa1150370 | MtrunA17_Chr1g0212771 | 28.293 | 205 | 103 | 8 | 26 | 196 | 2 | 196 | 3.95e-16 | 75.5 |
| Msa1150370 | MtrunA17_Chr7g0263461 | 66.000 | 50 | 17 | 0 | 27 | 76 | 33 | 82 | 7.57e-16 | 71.6 |
| Msa1150370 | MtrunA17_Chr7g0241301 | 35.537 | 121 | 56 | 2 | 24 | 142 | 1 | 101 | 1.32e-15 | 72.0 |
| Msa1150370 | MtrunA17_Chr7g0241291 | 35.507 | 138 | 66 | 4 | 180 | 301 | 11 | 141 | 5.38e-14 | 71.2 |
| Msa1150370 | MtrunA17_Chr8g0345251 | 29.825 | 171 | 112 | 7 | 134 | 299 | 14 | 181 | 1.59e-13 | 70.5 |
| Msa1150370 | MtrunA17_Chr1g0212761 | 38.202 | 89 | 50 | 1 | 28 | 116 | 2 | 85 | 1.99e-12 | 63.5 |
| Msa1150370 | MtrunA17_Chr7g0241221 | 48.684 | 76 | 35 | 4 | 186 | 259 | 2 | 75 | 4.23e-12 | 61.2 |
| Msa1150370 | MtrunA17_Chr4g0007321 | 28.571 | 182 | 109 | 4 | 36 | 201 | 64 | 240 | 1.03e-11 | 64.3 |
| Msa1150370 | MtrunA17_Chr7g0241191 | 35.385 | 130 | 74 | 7 | 112 | 234 | 1 | 127 | 1.19e-11 | 62.0 |
| Msa1150370 | MtrunA17_Chr7g0241501 | 62.791 | 43 | 16 | 0 | 39 | 81 | 1 | 43 | 2.94e-11 | 57.8 |
| Msa1150370 | MtrunA17_Chr7g0229211 | 36.957 | 92 | 52 | 2 | 27 | 117 | 2 | 88 | 4.40e-11 | 62.4 |
| Msa1150370 | MtrunA17_Chr8g0355371 | 38.043 | 92 | 51 | 2 | 27 | 117 | 2 | 88 | 4.73e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150370 | AT3G09110.1 | 36.981 | 265 | 163 | 3 | 35 | 296 | 11 | 274 | 2.78e-47 | 162 |
| Msa1150370 | AT3G09140.2 | 38.800 | 250 | 129 | 5 | 26 | 253 | 2 | 249 | 1.96e-43 | 155 |
| Msa1150370 | AT5G01120.1 | 37.818 | 275 | 157 | 7 | 34 | 295 | 10 | 283 | 2.80e-43 | 155 |
| Msa1150370 | AT5G01150.1 | 33.099 | 284 | 170 | 6 | 26 | 295 | 2 | 279 | 1.56e-40 | 147 |
| Msa1150370 | AT3G09140.1 | 34.892 | 278 | 129 | 6 | 26 | 253 | 2 | 277 | 2.13e-38 | 142 |
| Msa1150370 | AT5G01130.1 | 35.764 | 288 | 158 | 9 | 26 | 301 | 2 | 274 | 1.12e-36 | 136 |
| Msa1150370 | AT3G09120.1 | 37.553 | 237 | 126 | 6 | 32 | 253 | 5 | 234 | 7.74e-36 | 131 |
| Msa1150370 | AT5G43240.1 | 38.462 | 234 | 128 | 5 | 34 | 253 | 10 | 241 | 1.52e-35 | 134 |
| Msa1150370 | AT5G43240.3 | 38.462 | 234 | 128 | 5 | 34 | 253 | 10 | 241 | 1.52e-35 | 134 |
| Msa1150370 | AT5G43240.4 | 38.462 | 234 | 128 | 5 | 34 | 253 | 10 | 241 | 1.52e-35 | 134 |
| Msa1150370 | AT5G01140.1 | 29.577 | 284 | 169 | 5 | 26 | 301 | 2 | 262 | 1.20e-31 | 123 |
| Msa1150370 | AT5G37320.1 | 31.780 | 236 | 142 | 7 | 34 | 251 | 10 | 244 | 4.65e-24 | 102 |
Find 55 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGACCGGGTTCCATTTC+TGG | 0.056650 | 7_4:+33757465 | None:intergenic |
| TGCTGCGACGTTTATTATTA+AGG | 0.236277 | 7_4:-33756113 | Msa1150370:CDS |
| CACCCTTAACAAATCCTTTA+CGG | 0.279491 | 7_4:+33756134 | None:intergenic |
| CACATTATGTTTACCACTGC+TGG | 0.321412 | 7_4:+33756228 | None:intergenic |
| TACAAATTCATTGTCGGCTT+CGG | 0.330778 | 7_4:+33756516 | None:intergenic |
| TGGGTGCAGCAGCATTTCTT+TGG | 0.357507 | 7_4:+33756339 | None:intergenic |
| TTTCCGTAAAGGATTTGTTA+AGG | 0.394134 | 7_4:-33756137 | Msa1150370:CDS |
| AGATCTCGATGAAGGGTGTC+TGG | 0.395276 | 7_4:-33756374 | Msa1150370:CDS |
| TTCCGTAAAGGATTTGTTAA+GGG | 0.401039 | 7_4:-33756136 | Msa1150370:CDS |
| ACAATAACCTTCTGCTAAGT+TGG | 0.401202 | 7_4:+33756315 | None:intergenic |
| CTCACAATTAAATTTATTTG+AGG | 0.402395 | 7_4:+33756198 | None:intergenic |
| AACATCTACAAATTCATTGT+CGG | 0.404686 | 7_4:+33756510 | None:intergenic |
| AACCTTCTGCTAAGTTGGTT+GGG | 0.409042 | 7_4:+33756320 | None:intergenic |
| CAGCTTCTTGACACTTCCCT+TGG | 0.438885 | 7_4:-33756482 | Msa1150370:CDS |
| CATGGTGCAGAGGCCAGAAA+TGG | 0.454713 | 7_4:-33757478 | Msa1150370:CDS |
| TAACCTTCTGCTAAGTTGGT+TGG | 0.471317 | 7_4:+33756319 | None:intergenic |
| ATGATGAAACATTTCCGTAA+AGG | 0.474013 | 7_4:-33756148 | Msa1150370:CDS |
| AGCTTCTTGACACTTCCCTT+GGG | 0.479655 | 7_4:-33756481 | Msa1150370:CDS |
| ATGTTTCATCATAACTGAAC+GGG | 0.481490 | 7_4:+33756159 | None:intergenic |
| TGGAACCCGGTCATAGCATC+TGG | 0.487736 | 7_4:-33757458 | Msa1150370:CDS |
| TAAGGATGATTTGACTGTCA+TGG | 0.493742 | 7_4:-33756095 | Msa1150370:CDS |
| TGTCAATGTCACAAAGGAAA+AGG | 0.493841 | 7_4:-33755993 | Msa1150370:intron |
| AATAAATTTAATTGTGAGTG+TGG | 0.494829 | 7_4:-33756193 | Msa1150370:CDS |
| GATCTCGATGAAGGGTGTCT+GGG | 0.505292 | 7_4:-33756373 | Msa1150370:CDS |
| TTTCTTATAACAAGCTTCAC+GGG | 0.512729 | 7_4:+33755747 | None:intergenic |
| TGTGTAGAAGATCTCGATGA+AGG | 0.527025 | 7_4:-33756382 | Msa1150370:CDS |
| GCAAGTTGTTATATGCTGTA+GGG | 0.527922 | 7_4:-33755716 | Msa1150370:CDS |
| TTATGTCTGCTCCAGAACCT+TGG | 0.528122 | 7_4:-33756049 | Msa1150370:CDS |
| GCTTGACCAGATGCTATGAC+CGG | 0.532611 | 7_4:+33757452 | None:intergenic |
| ATCATAACTGAACGGGTCAA+AGG | 0.533513 | 7_4:+33756166 | None:intergenic |
| CAGAGGCCAGAAATGGAACC+CGG | 0.536039 | 7_4:-33757471 | Msa1150370:CDS |
| ACATTATGTTTACCACTGCT+GGG | 0.536884 | 7_4:+33756229 | None:intergenic |
| GTGCATATGAAGTACTTTGA+CGG | 0.538253 | 7_4:+33756259 | None:intergenic |
| GGCTGCTTCTGCTCAATCAG+AGG | 0.553527 | 7_4:-33756593 | Msa1150370:CDS |
| AGCATGGGGTCATTCACCAT+TGG | 0.558060 | 7_4:-33756427 | Msa1150370:CDS |
| TGCTTCTGCTCAATCAGAGG+AGG | 0.558354 | 7_4:-33756590 | Msa1150370:CDS |
| TGCACCATGTTTCCCAGCAG+TGG | 0.559057 | 7_4:-33756241 | Msa1150370:CDS |
| TTCCCTTGGGAACCATTGCT+AGG | 0.562737 | 7_4:-33756468 | Msa1150370:CDS |
| GACTGTCATGGCAAACTCCA+TGG | 0.565414 | 7_4:-33756083 | Msa1150370:CDS |
| ACATAAGTTTGTAACATCCA+TGG | 0.573840 | 7_4:+33756066 | None:intergenic |
| TAACCTAGCAATGGTTCCCA+AGG | 0.574937 | 7_4:+33756465 | None:intergenic |
| ATCTCGATGAAGGGTGTCTG+GGG | 0.582818 | 7_4:-33756372 | Msa1150370:CDS |
| TTTACCACTGCTGGGAAACA+TGG | 0.586430 | 7_4:+33756237 | None:intergenic |
| CTTGACCAGATGCTATGACC+GGG | 0.596152 | 7_4:+33757453 | None:intergenic |
| GAGTGAATTCAAACAACCAA+TGG | 0.597362 | 7_4:+33756411 | None:intergenic |
| CAAGTTGTTATATGCTGTAG+GGG | 0.599397 | 7_4:-33755715 | Msa1150370:CDS |
| CACCCAACCAACTTAGCAGA+AGG | 0.605467 | 7_4:-33756322 | Msa1150370:CDS |
| GTGTAGAAGATCTCGATGAA+GGG | 0.614452 | 7_4:-33756381 | Msa1150370:CDS |
| AGCAAGTTGTTATATGCTGT+AGG | 0.617521 | 7_4:-33755717 | Msa1150370:CDS |
| CTCACACACACATGGTGCAG+AGG | 0.617687 | 7_4:-33757488 | None:intergenic |
| AATGTTTCATCATAACTGAA+CGG | 0.620974 | 7_4:+33756158 | None:intergenic |
| GCTTCTGCTCAATCAGAGGA+GGG | 0.629126 | 7_4:-33756589 | Msa1150370:CDS |
| AATGATTGTCAATGTCACAA+AGG | 0.636541 | 7_4:-33755999 | Msa1150370:CDS |
| AACCTAGCAATGGTTCCCAA+GGG | 0.638517 | 7_4:+33756466 | None:intergenic |
| AGCAGAAGCAGCCACAACAG+TGG | 0.683145 | 7_4:+33756603 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGTAGTAACTTATTTTT+TGG | - | chr7_4:33755884-33755903 | Msa1150370:CDS | 15.0% |
| !!! | TTTTTTATAATAATGACTAG+AGG | - | chr7_4:33756109-33756128 | Msa1150370:CDS | 15.0% |
| !! | AAAATTGAAAAATATAGAAG+TGG | + | chr7_4:33756326-33756345 | None:intergenic | 15.0% |
| !!! | AATTGTAGTAACTTATTTTT+TGG | - | chr7_4:33755884-33755903 | Msa1150370:CDS | 15.0% |
| !!! | TTTTTTATAATAATGACTAG+AGG | - | chr7_4:33756109-33756128 | Msa1150370:CDS | 15.0% |
| !! | AAAATTGAAAAATATAGAAG+TGG | + | chr7_4:33756326-33756345 | None:intergenic | 15.0% |
| !! | ATTCTACTCCAAAATAAAAA+GGG | - | chr7_4:33756201-33756220 | Msa1150370:CDS | 20.0% |
| !!! | ATTTTCTTTTCATTTAAGCA+CGG | + | chr7_4:33756401-33756420 | None:intergenic | 20.0% |
| !!! | GGAATTTTATTTTAGAAAAC+TGG | + | chr7_4:33756507-33756526 | None:intergenic | 20.0% |
| !! | CTCACAATTAAATTTATTTG+AGG | + | chr7_4:33756980-33756999 | None:intergenic | 20.0% |
| !! | AATAAATTTAATTGTGAGTG+TGG | - | chr7_4:33756982-33757001 | Msa1150370:intron | 20.0% |
| !! | AATACAAGTCATTCAAAAAT+AGG | + | chr7_4:33757251-33757270 | None:intergenic | 20.0% |
| !! | ATTCTACTCCAAAATAAAAA+GGG | - | chr7_4:33756201-33756220 | Msa1150370:CDS | 20.0% |
| !!! | ATTTTCTTTTCATTTAAGCA+CGG | + | chr7_4:33756401-33756420 | None:intergenic | 20.0% |
| !!! | GGAATTTTATTTTAGAAAAC+TGG | + | chr7_4:33756507-33756526 | None:intergenic | 20.0% |
| !! | CTCACAATTAAATTTATTTG+AGG | + | chr7_4:33756980-33756999 | None:intergenic | 20.0% |
| !! | AATAAATTTAATTGTGAGTG+TGG | - | chr7_4:33756982-33757001 | Msa1150370:intron | 20.0% |
| !! | AATACAAGTCATTCAAAAAT+AGG | + | chr7_4:33757251-33757270 | None:intergenic | 20.0% |
| ! | GAAAGAAAGAAAAAAAGTTG+TGG | - | chr7_4:33755794-33755813 | Msa1150370:CDS | 25.0% |
| !!! | ATTTTTGCTATAATAGTGAC+CGG | + | chr7_4:33756005-33756024 | None:intergenic | 25.0% |
| !!! | TTTATTTTGGAGTAGAATGA+CGG | + | chr7_4:33756199-33756218 | None:intergenic | 25.0% |
| ! | CATTCTACTCCAAAATAAAA+AGG | - | chr7_4:33756200-33756219 | Msa1150370:CDS | 25.0% |
| !! | TTTTTACCGTTCATATATAC+TGG | + | chr7_4:33756457-33756476 | None:intergenic | 25.0% |
| ! | AATTTGCAATTTGAGAACTA+TGG | + | chr7_4:33756528-33756547 | None:intergenic | 25.0% |
| ! | AACATCTACAAATTCATTGT+CGG | + | chr7_4:33756668-33756687 | None:intergenic | 25.0% |
| ! | AATGTTTCATCATAACTGAA+CGG | + | chr7_4:33757020-33757039 | None:intergenic | 25.0% |
| !!! | AACTTGTACTTTTTATTCCA+AGG | + | chr7_4:33757146-33757165 | None:intergenic | 25.0% |
| ! | AAACATTTAGAGAACGAAAT+GGG | + | chr7_4:33757218-33757237 | None:intergenic | 25.0% |
| ! | TAAACATTTAGAGAACGAAA+TGG | + | chr7_4:33757219-33757238 | None:intergenic | 25.0% |
| ! | AAAAAAGAATGATCTCTCAA+TGG | + | chr7_4:33757360-33757379 | None:intergenic | 25.0% |
| !!! | GAGATCATTCTTTTTTTCTT+TGG | - | chr7_4:33757364-33757383 | Msa1150370:intron | 25.0% |
| !! | TTTTCTTATAACAAGCTTCA+CGG | + | chr7_4:33757432-33757451 | None:intergenic | 25.0% |
| ! | GAAAGAAAGAAAAAAAGTTG+TGG | - | chr7_4:33755794-33755813 | Msa1150370:CDS | 25.0% |
| !!! | ATTTTTGCTATAATAGTGAC+CGG | + | chr7_4:33756005-33756024 | None:intergenic | 25.0% |
| !!! | TTTATTTTGGAGTAGAATGA+CGG | + | chr7_4:33756199-33756218 | None:intergenic | 25.0% |
| ! | CATTCTACTCCAAAATAAAA+AGG | - | chr7_4:33756200-33756219 | Msa1150370:CDS | 25.0% |
| !! | TTTTTACCGTTCATATATAC+TGG | + | chr7_4:33756457-33756476 | None:intergenic | 25.0% |
| ! | AATTTGCAATTTGAGAACTA+TGG | + | chr7_4:33756528-33756547 | None:intergenic | 25.0% |
| ! | AACATCTACAAATTCATTGT+CGG | + | chr7_4:33756668-33756687 | None:intergenic | 25.0% |
| ! | AATGTTTCATCATAACTGAA+CGG | + | chr7_4:33757020-33757039 | None:intergenic | 25.0% |
| !!! | AACTTGTACTTTTTATTCCA+AGG | + | chr7_4:33757146-33757165 | None:intergenic | 25.0% |
| ! | AAACATTTAGAGAACGAAAT+GGG | + | chr7_4:33757218-33757237 | None:intergenic | 25.0% |
| ! | TAAACATTTAGAGAACGAAA+TGG | + | chr7_4:33757219-33757238 | None:intergenic | 25.0% |
| ! | AAAAAAGAATGATCTCTCAA+TGG | + | chr7_4:33757360-33757379 | None:intergenic | 25.0% |
| !!! | GAGATCATTCTTTTTTTCTT+TGG | - | chr7_4:33757364-33757383 | Msa1150370:intron | 25.0% |
| !! | TTTTCTTATAACAAGCTTCA+CGG | + | chr7_4:33757432-33757451 | None:intergenic | 25.0% |
| CATTCATTAAACGATGTATG+TGG | + | chr7_4:33756069-33756088 | None:intergenic | 30.0% | |
| !! | ATCATTCGCCCTTTTTATTT+TGG | + | chr7_4:33756212-33756231 | None:intergenic | 30.0% |
| GTTTACAGCTGTATTTAAGT+GGG | + | chr7_4:33756245-33756264 | None:intergenic | 30.0% | |
| !!! | TTACTTAGCTCTTTTTTCAC+AGG | + | chr7_4:33756282-33756301 | None:intergenic | 30.0% |
| !! | AAACTGGATAGAAGTGTTTA+TGG | + | chr7_4:33756491-33756510 | None:intergenic | 30.0% |
| ! | TTTTTCTACTAACCTAGCAA+TGG | + | chr7_4:33756722-33756741 | None:intergenic | 30.0% |
| ATGTTTCATCATAACTGAAC+GGG | + | chr7_4:33757019-33757038 | None:intergenic | 30.0% | |
| ATGATGAAACATTTCCGTAA+AGG | - | chr7_4:33757027-33757046 | Msa1150370:intron | 30.0% | |
| !! | TTTCCGTAAAGGATTTGTTA+AGG | - | chr7_4:33757038-33757057 | Msa1150370:intron | 30.0% |
| !! | TTCCGTAAAGGATTTGTTAA+GGG | - | chr7_4:33757039-33757058 | Msa1150370:intron | 30.0% |
| ACATAAGTTTGTAACATCCA+TGG | + | chr7_4:33757112-33757131 | None:intergenic | 30.0% | |
| !! | TACTTTTTATTCCAAGGTTC+TGG | + | chr7_4:33757140-33757159 | None:intergenic | 30.0% |
| ! | AAAAAGTACAAGTTCTGTGA+AGG | - | chr7_4:33757152-33757171 | Msa1150370:intron | 30.0% |
| AATGATTGTCAATGTCACAA+AGG | - | chr7_4:33757176-33757195 | Msa1150370:intron | 30.0% | |
| ! | ATGACTTGTATTCTCTATAC+AGG | - | chr7_4:33757259-33757278 | Msa1150370:intron | 30.0% |
| TGTATTCTCTATACAGGTAT+TGG | - | chr7_4:33757265-33757284 | Msa1150370:intron | 30.0% | |
| !!! | CACTCACAGATTTGTTTTTA+CGG | - | chr7_4:33757321-33757340 | Msa1150370:intron | 30.0% |
| TTTCTTATAACAAGCTTCAC+GGG | + | chr7_4:33757431-33757450 | None:intergenic | 30.0% | |
| CATTCATTAAACGATGTATG+TGG | + | chr7_4:33756069-33756088 | None:intergenic | 30.0% | |
| !! | ATCATTCGCCCTTTTTATTT+TGG | + | chr7_4:33756212-33756231 | None:intergenic | 30.0% |
| GTTTACAGCTGTATTTAAGT+GGG | + | chr7_4:33756245-33756264 | None:intergenic | 30.0% | |
| !!! | TTACTTAGCTCTTTTTTCAC+AGG | + | chr7_4:33756282-33756301 | None:intergenic | 30.0% |
| !! | AAACTGGATAGAAGTGTTTA+TGG | + | chr7_4:33756491-33756510 | None:intergenic | 30.0% |
| ! | TTTTTCTACTAACCTAGCAA+TGG | + | chr7_4:33756722-33756741 | None:intergenic | 30.0% |
| ATGTTTCATCATAACTGAAC+GGG | + | chr7_4:33757019-33757038 | None:intergenic | 30.0% | |
| ATGATGAAACATTTCCGTAA+AGG | - | chr7_4:33757027-33757046 | Msa1150370:intron | 30.0% | |
| !! | TTTCCGTAAAGGATTTGTTA+AGG | - | chr7_4:33757038-33757057 | Msa1150370:intron | 30.0% |
| !! | TTCCGTAAAGGATTTGTTAA+GGG | - | chr7_4:33757039-33757058 | Msa1150370:intron | 30.0% |
| ACATAAGTTTGTAACATCCA+TGG | + | chr7_4:33757112-33757131 | None:intergenic | 30.0% | |
| !! | TACTTTTTATTCCAAGGTTC+TGG | + | chr7_4:33757140-33757159 | None:intergenic | 30.0% |
| ! | AAAAAGTACAAGTTCTGTGA+AGG | - | chr7_4:33757152-33757171 | Msa1150370:intron | 30.0% |
| AATGATTGTCAATGTCACAA+AGG | - | chr7_4:33757176-33757195 | Msa1150370:intron | 30.0% | |
| ! | ATGACTTGTATTCTCTATAC+AGG | - | chr7_4:33757259-33757278 | Msa1150370:intron | 30.0% |
| TGTATTCTCTATACAGGTAT+TGG | - | chr7_4:33757265-33757284 | Msa1150370:intron | 30.0% | |
| !!! | CACTCACAGATTTGTTTTTA+CGG | - | chr7_4:33757321-33757340 | Msa1150370:intron | 30.0% |
| TTTCTTATAACAAGCTTCAC+GGG | + | chr7_4:33757431-33757450 | None:intergenic | 30.0% | |
| GAAAAAAAGTTGTGGACAAC+AGG | - | chr7_4:33755802-33755821 | Msa1150370:CDS | 35.0% | |
| !!! | ACAGGTCGCTATTTTTAACA+AGG | - | chr7_4:33755820-33755839 | Msa1150370:CDS | 35.0% |
| !!! | CAGGTCGCTATTTTTAACAA+GGG | - | chr7_4:33755821-33755840 | Msa1150370:CDS | 35.0% |
| GGTTTACAGCTGTATTTAAG+TGG | + | chr7_4:33756246-33756265 | None:intergenic | 35.0% | |
| TTCACAGGTAATGCATATGA+TGG | + | chr7_4:33756267-33756286 | None:intergenic | 35.0% | |
| AAGTAATTCCACCAATACGT+AGG | - | chr7_4:33756296-33756315 | Msa1150370:CDS | 35.0% | |
| TACGCACCAGTATATATGAA+CGG | - | chr7_4:33756448-33756467 | Msa1150370:CDS | 35.0% | |
| !! | TTATTTTCTAGCCACTGTTG+TGG | - | chr7_4:33756561-33756580 | Msa1150370:CDS | 35.0% |
| !! | TACAAATTCATTGTCGGCTT+CGG | + | chr7_4:33756662-33756681 | None:intergenic | 35.0% |
| AGTAGAAAAAGAGTCAAGCA+TGG | - | chr7_4:33756732-33756751 | Msa1150370:intron | 35.0% | |
| GTAGAAAAAGAGTCAAGCAT+GGG | - | chr7_4:33756733-33756752 | Msa1150370:intron | 35.0% | |
| TAGAAAAAGAGTCAAGCATG+GGG | - | chr7_4:33756734-33756753 | Msa1150370:intron | 35.0% | |
| GAGTGAATTCAAACAACCAA+TGG | + | chr7_4:33756767-33756786 | None:intergenic | 35.0% | |
| ACAATAACCTTCTGCTAAGT+TGG | + | chr7_4:33756863-33756882 | None:intergenic | 35.0% | |
| ! | GTGCATATGAAGTACTTTGA+CGG | + | chr7_4:33756919-33756938 | None:intergenic | 35.0% |
| ACATTATGTTTACCACTGCT+GGG | + | chr7_4:33756949-33756968 | None:intergenic | 35.0% | |
| CACCCTTAACAAATCCTTTA+CGG | + | chr7_4:33757044-33757063 | None:intergenic | 35.0% | |
| TGCTGCGACGTTTATTATTA+AGG | - | chr7_4:33757062-33757081 | Msa1150370:intron | 35.0% | |
| TAAGGATGATTTGACTGTCA+TGG | - | chr7_4:33757080-33757099 | Msa1150370:intron | 35.0% | |
| TGTCAATGTCACAAAGGAAA+AGG | - | chr7_4:33757182-33757201 | Msa1150370:intron | 35.0% | |
| CGTAAAAACAAATCTGTGAG+TGG | + | chr7_4:33757323-33757342 | None:intergenic | 35.0% | |
| AGCAAGTTGTTATATGCTGT+AGG | - | chr7_4:33757458-33757477 | Msa1150370:CDS | 35.0% | |
| GCAAGTTGTTATATGCTGTA+GGG | - | chr7_4:33757459-33757478 | Msa1150370:CDS | 35.0% | |
| CAAGTTGTTATATGCTGTAG+GGG | - | chr7_4:33757460-33757479 | Msa1150370:CDS | 35.0% | |
| GAAAAAAAGTTGTGGACAAC+AGG | - | chr7_4:33755802-33755821 | Msa1150370:CDS | 35.0% | |
| !!! | ACAGGTCGCTATTTTTAACA+AGG | - | chr7_4:33755820-33755839 | Msa1150370:CDS | 35.0% |
| !!! | CAGGTCGCTATTTTTAACAA+GGG | - | chr7_4:33755821-33755840 | Msa1150370:CDS | 35.0% |
| GGTTTACAGCTGTATTTAAG+TGG | + | chr7_4:33756246-33756265 | None:intergenic | 35.0% | |
| TTCACAGGTAATGCATATGA+TGG | + | chr7_4:33756267-33756286 | None:intergenic | 35.0% | |
| AAGTAATTCCACCAATACGT+AGG | - | chr7_4:33756296-33756315 | Msa1150370:CDS | 35.0% | |
| TACGCACCAGTATATATGAA+CGG | - | chr7_4:33756448-33756467 | Msa1150370:CDS | 35.0% | |
| !! | TTATTTTCTAGCCACTGTTG+TGG | - | chr7_4:33756561-33756580 | Msa1150370:CDS | 35.0% |
| !! | TACAAATTCATTGTCGGCTT+CGG | + | chr7_4:33756662-33756681 | None:intergenic | 35.0% |
| AGTAGAAAAAGAGTCAAGCA+TGG | - | chr7_4:33756732-33756751 | Msa1150370:intron | 35.0% | |
| GTAGAAAAAGAGTCAAGCAT+GGG | - | chr7_4:33756733-33756752 | Msa1150370:intron | 35.0% | |
| TAGAAAAAGAGTCAAGCATG+GGG | - | chr7_4:33756734-33756753 | Msa1150370:intron | 35.0% | |
| GAGTGAATTCAAACAACCAA+TGG | + | chr7_4:33756767-33756786 | None:intergenic | 35.0% | |
| ACAATAACCTTCTGCTAAGT+TGG | + | chr7_4:33756863-33756882 | None:intergenic | 35.0% | |
| ! | GTGCATATGAAGTACTTTGA+CGG | + | chr7_4:33756919-33756938 | None:intergenic | 35.0% |
| ACATTATGTTTACCACTGCT+GGG | + | chr7_4:33756949-33756968 | None:intergenic | 35.0% | |
| CACCCTTAACAAATCCTTTA+CGG | + | chr7_4:33757044-33757063 | None:intergenic | 35.0% | |
| TGCTGCGACGTTTATTATTA+AGG | - | chr7_4:33757062-33757081 | Msa1150370:intron | 35.0% | |
| TAAGGATGATTTGACTGTCA+TGG | - | chr7_4:33757080-33757099 | Msa1150370:intron | 35.0% | |
| TGTCAATGTCACAAAGGAAA+AGG | - | chr7_4:33757182-33757201 | Msa1150370:intron | 35.0% | |
| CGTAAAAACAAATCTGTGAG+TGG | + | chr7_4:33757323-33757342 | None:intergenic | 35.0% | |
| AGCAAGTTGTTATATGCTGT+AGG | - | chr7_4:33757458-33757477 | Msa1150370:CDS | 35.0% | |
| GCAAGTTGTTATATGCTGTA+GGG | - | chr7_4:33757459-33757478 | Msa1150370:CDS | 35.0% | |
| CAAGTTGTTATATGCTGTAG+GGG | - | chr7_4:33757460-33757479 | Msa1150370:CDS | 35.0% | |
| ! | ATGAGTTGAGCTACAACTTG+TGG | - | chr7_4:33755761-33755780 | Msa1150370:CDS | 40.0% |
| TTCTTAACATGTACACCCTC+CGG | - | chr7_4:33755983-33756002 | Msa1150370:intron | 40.0% | |
| TTGCTATAATAGTGACCGGA+GGG | + | chr7_4:33756001-33756020 | None:intergenic | 40.0% | |
| ! | TTTGCTATAATAGTGACCGG+AGG | + | chr7_4:33756002-33756021 | None:intergenic | 40.0% |
| TGTGTAGAAGATCTCGATGA+AGG | - | chr7_4:33756793-33756812 | Msa1150370:intron | 40.0% | |
| GTGTAGAAGATCTCGATGAA+GGG | - | chr7_4:33756794-33756813 | Msa1150370:intron | 40.0% | |
| !! | AACCTTCTGCTAAGTTGGTT+GGG | + | chr7_4:33756858-33756877 | None:intergenic | 40.0% |
| !! | TAACCTTCTGCTAAGTTGGT+TGG | + | chr7_4:33756859-33756878 | None:intergenic | 40.0% |
| CACATTATGTTTACCACTGC+TGG | + | chr7_4:33756950-33756969 | None:intergenic | 40.0% | |
| ATCATAACTGAACGGGTCAA+AGG | + | chr7_4:33757012-33757031 | None:intergenic | 40.0% | |
| ! | ATGAGTTGAGCTACAACTTG+TGG | - | chr7_4:33755761-33755780 | Msa1150370:CDS | 40.0% |
| TTCTTAACATGTACACCCTC+CGG | - | chr7_4:33755983-33756002 | Msa1150370:intron | 40.0% | |
| TTGCTATAATAGTGACCGGA+GGG | + | chr7_4:33756001-33756020 | None:intergenic | 40.0% | |
| ! | TTTGCTATAATAGTGACCGG+AGG | + | chr7_4:33756002-33756021 | None:intergenic | 40.0% |
| TGTGTAGAAGATCTCGATGA+AGG | - | chr7_4:33756793-33756812 | Msa1150370:intron | 40.0% | |
| GTGTAGAAGATCTCGATGAA+GGG | - | chr7_4:33756794-33756813 | Msa1150370:intron | 40.0% | |
| !! | AACCTTCTGCTAAGTTGGTT+GGG | + | chr7_4:33756858-33756877 | None:intergenic | 40.0% |
| !! | TAACCTTCTGCTAAGTTGGT+TGG | + | chr7_4:33756859-33756878 | None:intergenic | 40.0% |
| CACATTATGTTTACCACTGC+TGG | + | chr7_4:33756950-33756969 | None:intergenic | 40.0% | |
| ATCATAACTGAACGGGTCAA+AGG | + | chr7_4:33757012-33757031 | None:intergenic | 40.0% | |
| !! | GAAGTGGACTACCTACGTAT+TGG | + | chr7_4:33756310-33756329 | None:intergenic | 45.0% |
| AGCTTCTTGACACTTCCCTT+GGG | - | chr7_4:33756694-33756713 | Msa1150370:intron | 45.0% | |
| AACCTAGCAATGGTTCCCAA+GGG | + | chr7_4:33756712-33756731 | None:intergenic | 45.0% | |
| TAACCTAGCAATGGTTCCCA+AGG | + | chr7_4:33756713-33756732 | None:intergenic | 45.0% | |
| TTTACCACTGCTGGGAAACA+TGG | + | chr7_4:33756941-33756960 | None:intergenic | 45.0% | |
| TTATGTCTGCTCCAGAACCT+TGG | - | chr7_4:33757126-33757145 | Msa1150370:intron | 45.0% | |
| !! | GAAGTGGACTACCTACGTAT+TGG | + | chr7_4:33756310-33756329 | None:intergenic | 45.0% |
| AGCTTCTTGACACTTCCCTT+GGG | - | chr7_4:33756694-33756713 | Msa1150370:intron | 45.0% | |
| AACCTAGCAATGGTTCCCAA+GGG | + | chr7_4:33756712-33756731 | None:intergenic | 45.0% | |
| TAACCTAGCAATGGTTCCCA+AGG | + | chr7_4:33756713-33756732 | None:intergenic | 45.0% | |
| TTTACCACTGCTGGGAAACA+TGG | + | chr7_4:33756941-33756960 | None:intergenic | 45.0% | |
| TTATGTCTGCTCCAGAACCT+TGG | - | chr7_4:33757126-33757145 | Msa1150370:intron | 45.0% | |
| CTATGACCGGGTTCCATTTC+TGG | + | chr7_4:33755713-33755732 | None:intergenic | 50.0% | |
| CTTGACCAGATGCTATGACC+GGG | + | chr7_4:33755725-33755744 | None:intergenic | 50.0% | |
| GCTTGACCAGATGCTATGAC+CGG | + | chr7_4:33755726-33755745 | None:intergenic | 50.0% | |
| ! | GTGGACTACCTACGTATTGG+TGG | + | chr7_4:33756307-33756326 | None:intergenic | 50.0% |
| TGCTTCTGCTCAATCAGAGG+AGG | - | chr7_4:33756585-33756604 | Msa1150370:CDS | 50.0% | |
| GCTTCTGCTCAATCAGAGGA+GGG | - | chr7_4:33756586-33756605 | Msa1150370:CDS | 50.0% | |
| CAGCTTCTTGACACTTCCCT+TGG | - | chr7_4:33756693-33756712 | Msa1150370:intron | 50.0% | |
| TTCCCTTGGGAACCATTGCT+AGG | - | chr7_4:33756707-33756726 | Msa1150370:intron | 50.0% | |
| AGCATGGGGTCATTCACCAT+TGG | - | chr7_4:33756748-33756767 | Msa1150370:intron | 50.0% | |
| !! | AGATCTCGATGAAGGGTGTC+TGG | - | chr7_4:33756801-33756820 | Msa1150370:intron | 50.0% |
| !! | GATCTCGATGAAGGGTGTCT+GGG | - | chr7_4:33756802-33756821 | Msa1150370:intron | 50.0% |
| !! | ATCTCGATGAAGGGTGTCTG+GGG | - | chr7_4:33756803-33756822 | Msa1150370:intron | 50.0% |
| TGGGTGCAGCAGCATTTCTT+TGG | + | chr7_4:33756839-33756858 | None:intergenic | 50.0% | |
| CACCCAACCAACTTAGCAGA+AGG | - | chr7_4:33756853-33756872 | Msa1150370:intron | 50.0% | |
| GACTGTCATGGCAAACTCCA+TGG | - | chr7_4:33757092-33757111 | Msa1150370:intron | 50.0% | |
| CTATGACCGGGTTCCATTTC+TGG | + | chr7_4:33755713-33755732 | None:intergenic | 50.0% | |
| CTTGACCAGATGCTATGACC+GGG | + | chr7_4:33755725-33755744 | None:intergenic | 50.0% | |
| GCTTGACCAGATGCTATGAC+CGG | + | chr7_4:33755726-33755745 | None:intergenic | 50.0% | |
| ! | GTGGACTACCTACGTATTGG+TGG | + | chr7_4:33756307-33756326 | None:intergenic | 50.0% |
| TGCTTCTGCTCAATCAGAGG+AGG | - | chr7_4:33756585-33756604 | Msa1150370:CDS | 50.0% | |
| GCTTCTGCTCAATCAGAGGA+GGG | - | chr7_4:33756586-33756605 | Msa1150370:CDS | 50.0% | |
| CAGCTTCTTGACACTTCCCT+TGG | - | chr7_4:33756693-33756712 | Msa1150370:intron | 50.0% | |
| TTCCCTTGGGAACCATTGCT+AGG | - | chr7_4:33756707-33756726 | Msa1150370:intron | 50.0% | |
| AGCATGGGGTCATTCACCAT+TGG | - | chr7_4:33756748-33756767 | Msa1150370:intron | 50.0% | |
| !! | AGATCTCGATGAAGGGTGTC+TGG | - | chr7_4:33756801-33756820 | Msa1150370:intron | 50.0% |
| !! | GATCTCGATGAAGGGTGTCT+GGG | - | chr7_4:33756802-33756821 | Msa1150370:intron | 50.0% |
| !! | ATCTCGATGAAGGGTGTCTG+GGG | - | chr7_4:33756803-33756822 | Msa1150370:intron | 50.0% |
| TGGGTGCAGCAGCATTTCTT+TGG | + | chr7_4:33756839-33756858 | None:intergenic | 50.0% | |
| CACCCAACCAACTTAGCAGA+AGG | - | chr7_4:33756853-33756872 | Msa1150370:intron | 50.0% | |
| GACTGTCATGGCAAACTCCA+TGG | - | chr7_4:33757092-33757111 | Msa1150370:intron | 50.0% | |
| CAGAGGCCAGAAATGGAACC+CGG | - | chr7_4:33755704-33755723 | Msa1150370:CDS | 55.0% | |
| TGGAACCCGGTCATAGCATC+TGG | - | chr7_4:33755717-33755736 | Msa1150370:CDS | 55.0% | |
| AGCAGAAGCAGCCACAACAG+TGG | + | chr7_4:33756575-33756594 | None:intergenic | 55.0% | |
| GGCTGCTTCTGCTCAATCAG+AGG | - | chr7_4:33756582-33756601 | Msa1150370:CDS | 55.0% | |
| TGCACCATGTTTCCCAGCAG+TGG | - | chr7_4:33756934-33756953 | Msa1150370:intron | 55.0% | |
| CAGAGGCCAGAAATGGAACC+CGG | - | chr7_4:33755704-33755723 | Msa1150370:CDS | 55.0% | |
| TGGAACCCGGTCATAGCATC+TGG | - | chr7_4:33755717-33755736 | Msa1150370:CDS | 55.0% | |
| AGCAGAAGCAGCCACAACAG+TGG | + | chr7_4:33756575-33756594 | None:intergenic | 55.0% | |
| GGCTGCTTCTGCTCAATCAG+AGG | - | chr7_4:33756582-33756601 | Msa1150370:CDS | 55.0% | |
| TGCACCATGTTTCCCAGCAG+TGG | - | chr7_4:33756934-33756953 | Msa1150370:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 33755698 | 33757499 | 33755698 | ID=Msa1150370;Name=Msa1150370 |
| chr7_4 | mRNA | 33755698 | 33757499 | 33755698 | ID=Msa1150370-mRNA-1;Parent=Msa1150370;Name=Msa1150370-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|0.66|1|1|3|0|303 |
| chr7_4 | exon | 33757439 | 33757499 | 33757439 | ID=Msa1150370-mRNA-1:exon:8027;Parent=Msa1150370-mRNA-1 |
| chr7_4 | exon | 33755994 | 33756625 | 33755994 | ID=Msa1150370-mRNA-1:exon:8026;Parent=Msa1150370-mRNA-1 |
| chr7_4 | exon | 33755698 | 33755916 | 33755698 | ID=Msa1150370-mRNA-1:exon:8025;Parent=Msa1150370-mRNA-1 |
| chr7_4 | CDS | 33757439 | 33757499 | 33757439 | ID=Msa1150370-mRNA-1:cds;Parent=Msa1150370-mRNA-1 |
| chr7_4 | CDS | 33755994 | 33756625 | 33755994 | ID=Msa1150370-mRNA-1:cds;Parent=Msa1150370-mRNA-1 |
| chr7_4 | CDS | 33755698 | 33755916 | 33755698 | ID=Msa1150370-mRNA-1:cds;Parent=Msa1150370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
