Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034710 | XP_003625149.1 | 95.341 | 279 | 13 | 0 | 1 | 279 | 1 | 279 | 7.61e-165 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034710 | sp|P93758|RMR42_ARATH | 53.901 | 282 | 96 | 7 | 9 | 279 | 13 | 271 | 1.46e-86 | 262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034710 | A2Q3K8 | 95.341 | 279 | 13 | 0 | 1 | 279 | 1 | 279 | 3.64e-165 | 468 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0051460 | Msa1034710 | 0.801137 | 1.037747e-48 | -8.615850e-47 |
| Msa0096450 | Msa1034710 | 0.801811 | 7.548430e-49 | -8.615850e-47 |
| Msa0607540 | Msa1034710 | 0.836551 | 8.759034e-57 | -8.615850e-47 |
| Msa0640380 | Msa1034710 | 0.833702 | 4.582634e-56 | -8.615850e-47 |
| Msa0647830 | Msa1034710 | 0.834502 | 2.888043e-56 | -8.615850e-47 |
| Msa0678820 | Msa1034710 | 0.842383 | 2.673368e-58 | -8.615850e-47 |
| Msa0690440 | Msa1034710 | 0.830839 | 2.342534e-55 | -8.615850e-47 |
| Msa0723210 | Msa1034710 | 0.834454 | 2.968834e-56 | -8.615850e-47 |
| Msa0767080 | Msa1034710 | 0.809082 | 2.255166e-50 | -8.615850e-47 |
| Msa0785570 | Msa1034710 | 0.801995 | 6.920096e-49 | -8.615850e-47 |
| Msa0790680 | Msa1034710 | 0.810401 | 1.173843e-50 | -8.615850e-47 |
| Msa0806200 | Msa1034710 | 0.812500 | 4.110016e-51 | -8.615850e-47 |
| Msa0201070 | Msa1034710 | 0.804365 | 2.237414e-49 | -8.615850e-47 |
| Msa0431690 | Msa1034710 | 0.803345 | 3.643686e-49 | -8.615850e-47 |
| Msa0438050 | Msa1034710 | 0.821371 | 4.183415e-53 | -8.615850e-47 |
| Msa1034710 | Msa1054410 | 0.806950 | 6.411462e-50 | -8.615850e-47 |
| Msa1034710 | Msa1070850 | 0.810792 | 9.663060e-51 | -8.615850e-47 |
| Msa1034710 | Msa1074530 | 0.910466 | 1.814548e-82 | -8.615850e-47 |
| Msa1034710 | Msa1075220 | -0.820534 | 6.520844e-53 | -8.615850e-47 |
| Msa1034710 | Msa1080790 | 0.815054 | 1.125298e-51 | -8.615850e-47 |
| Msa1034710 | Msa1105450 | 0.827024 | 1.966052e-54 | -8.615850e-47 |
| Msa1034710 | Msa1115020 | 0.929269 | 8.854900e-93 | -8.615850e-47 |
| Msa1034710 | Msa1118750 | 0.809529 | 1.808584e-50 | -8.615850e-47 |
| Msa1034710 | Msa1118930 | 0.815312 | 9.860834e-52 | -8.615850e-47 |
| Msa1034710 | Msa1132950 | 0.800770 | 1.233025e-48 | -8.615850e-47 |
| Msa1034710 | Msa1139000 | -0.802267 | 6.085364e-49 | -8.615850e-47 |
| Msa1034710 | Msa1143270 | 0.801452 | 8.946154e-49 | -8.615850e-47 |
| Msa1034710 | Msa1158670 | 0.812518 | 4.071615e-51 | -8.615850e-47 |
| Msa1034710 | Msa1162070 | 0.846055 | 2.761164e-59 | -8.615850e-47 |
| Msa1034710 | Msa1162550 | -0.825978 | 3.489709e-54 | -8.615850e-47 |
| Msa1034710 | Msa1252080 | 0.805476 | 1.310857e-49 | -8.615850e-47 |
| Msa1034710 | Msa1255060 | 0.810348 | 1.205108e-50 | -8.615850e-47 |
| Msa1034710 | Msa1279210 | 0.806161 | 9.410132e-50 | -8.615850e-47 |
| Msa1034710 | Msa1295510 | 0.818408 | 1.991351e-52 | -8.615850e-47 |
| Msa1034710 | Msa1322190 | 0.804617 | 1.982253e-49 | -8.615850e-47 |
| Msa1034710 | Msa1393040 | 0.816616 | 5.046241e-52 | -8.615850e-47 |
| Msa1034710 | Msa1451620 | -0.810880 | 9.250325e-51 | -8.615850e-47 |
| Msa1034710 | Msa1464940 | 0.804411 | 2.187919e-49 | -8.615850e-47 |
| Msa0260270 | Msa1034710 | -0.806994 | 6.278344e-50 | -8.615850e-47 |
| Msa0309550 | Msa1034710 | 0.807531 | 4.830927e-50 | -8.615850e-47 |
| Msa0315290 | Msa1034710 | 0.802500 | 5.448685e-49 | -8.615850e-47 |
| Msa0536220 | Msa1034710 | 0.825046 | 5.802251e-54 | -8.615850e-47 |
| Msa0543900 | Msa1034710 | 0.824147 | 9.450637e-54 | -8.615850e-47 |
| Msa0553460 | Msa1034710 | 0.834575 | 2.768414e-56 | -8.615850e-47 |
| Msa0564510 | Msa1034710 | 0.803074 | 4.147036e-49 | -8.615850e-47 |
| Msa0595850 | Msa1034710 | 0.808336 | 3.256426e-50 | -8.615850e-47 |
| Msa0599770 | Msa1034710 | 0.832164 | 1.104879e-55 | -8.615850e-47 |
| Msa0599890 | Msa1034710 | 0.816136 | 6.462042e-52 | -8.615850e-47 |
| Msa0846810 | Msa1034710 | 0.842310 | 2.795719e-58 | -8.615850e-47 |
| Msa0886330 | Msa1034710 | -0.800578 | 1.349831e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034710 | MtrunA17_Chr7g0257771 | 95.341 | 279 | 13 | 0 | 1 | 279 | 1 | 279 | 7.00e-169 | 468 |
| Msa1034710 | MtrunA17_Chr1g0173571 | 59.932 | 292 | 85 | 8 | 1 | 279 | 1 | 273 | 9.91e-100 | 293 |
| Msa1034710 | MtrunA17_Chr8g0377061 | 37.857 | 140 | 79 | 2 | 146 | 278 | 214 | 352 | 2.57e-16 | 77.8 |
| Msa1034710 | MtrunA17_Chr1g0153281 | 34.862 | 109 | 71 | 0 | 163 | 271 | 499 | 607 | 1.27e-12 | 67.8 |
| Msa1034710 | MtrunA17_Chr1g0203401 | 36.508 | 126 | 78 | 2 | 154 | 278 | 82 | 206 | 1.80e-12 | 65.1 |
| Msa1034710 | MtrunA17_Chr8g0376741 | 33.654 | 104 | 69 | 0 | 170 | 273 | 414 | 517 | 2.48e-12 | 66.6 |
| Msa1034710 | MtrunA17_Chr8g0386521 | 29.787 | 141 | 95 | 1 | 133 | 273 | 55 | 191 | 2.61e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034710 | AT2G41870.1 | 53.901 | 282 | 96 | 7 | 9 | 279 | 13 | 271 | 1.48e-87 | 262 |
| Msa1034710 | AT3G57540.1 | 51.579 | 285 | 124 | 7 | 5 | 279 | 13 | 293 | 2.42e-82 | 249 |
| Msa1034710 | AT1G67590.1 | 42.593 | 108 | 62 | 0 | 171 | 278 | 229 | 336 | 4.89e-16 | 77.4 |
| Msa1034710 | AT1G30320.1 | 33.929 | 112 | 74 | 0 | 163 | 274 | 387 | 498 | 2.94e-14 | 72.8 |
| Msa1034710 | AT5G23750.3 | 36.842 | 114 | 71 | 1 | 165 | 278 | 114 | 226 | 3.59e-14 | 70.5 |
| Msa1034710 | AT5G23750.1 | 36.842 | 114 | 71 | 1 | 165 | 278 | 87 | 199 | 1.28e-13 | 68.6 |
| Msa1034710 | AT5G23750.2 | 37.500 | 104 | 64 | 1 | 175 | 278 | 96 | 198 | 1.49e-13 | 68.2 |
| Msa1034710 | AT3G48940.1 | 35.849 | 106 | 67 | 1 | 175 | 279 | 70 | 175 | 3.26e-13 | 67.0 |
| Msa1034710 | AT3G61260.1 | 35.354 | 99 | 64 | 0 | 175 | 273 | 107 | 205 | 3.71e-11 | 61.6 |
Find 84 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTATTTGTTCATCTTCT+TGG | 0.075826 | 7_1:+70295124 | None:intergenic |
| TTACTTTAATTAATATTTCT+TGG | 0.210335 | 7_1:-70292158 | Msa1034710:three_prime_UTR |
| CACTCTTTAACTAATTAAAA+AGG | 0.214979 | 7_1:+70292393 | None:intergenic |
| CTAAAATATGAATGAGATAA+TGG | 0.299005 | 7_1:-70292045 | Msa1034710:three_prime_UTR |
| TCATGAGGACTTATGTTGTT+AGG | 0.306493 | 7_1:+70294922 | None:intergenic |
| TGCTGATGCTTTCCTCTCTT+CGG | 0.348171 | 7_1:+70292575 | None:intergenic |
| TTTAGAGAAAATTCAGAAGT+AGG | 0.357510 | 7_1:+70292063 | None:intergenic |
| TTTGTTGGTGGTGGAGGAGG+TGG | 0.373160 | 7_1:+70295063 | None:intergenic |
| CATGAGGACTTATGTTGTTA+GGG | 0.407701 | 7_1:+70294923 | None:intergenic |
| CGGTTTGTTGGTGGTGGAGG+AGG | 0.411956 | 7_1:+70295060 | None:intergenic |
| TCACTTATAAACACTCCAAT+TGG | 0.419385 | 7_1:+70292284 | None:intergenic |
| TGAATGAAATTTCCTCACTT+TGG | 0.433844 | 7_1:-70295241 | Msa1034710:five_prime_UTR |
| CCGCGGTTTGTTGGTGGTGG+AGG | 0.437166 | 7_1:+70295057 | None:intergenic |
| TGGAAATGGTGAGAAGAGTT+TGG | 0.439573 | 7_1:+70295307 | None:intergenic |
| GAGTTTGGACCACAGAGAAA+TGG | 0.444061 | 7_1:+70295322 | None:intergenic |
| CCACAACAAACTGTTCCTAA+TGG | 0.446952 | 7_1:-70292089 | Msa1034710:three_prime_UTR |
| TTCAGAAGTAGGTAACCATT+AGG | 0.449283 | 7_1:+70292074 | None:intergenic |
| TATACTTAATGAAAACCAAT+TGG | 0.455251 | 7_1:-70292299 | Msa1034710:three_prime_UTR |
| TTCAATGCTCTTGTTCTAGC+AGG | 0.458326 | 7_1:-70294958 | Msa1034710:CDS |
| CAATGGATGGGAGAGTGAAC+AGG | 0.460888 | 7_1:-70294584 | Msa1034710:CDS |
| CCGCCGCGGTTTGTTGGTGG+TGG | 0.462987 | 7_1:+70295054 | None:intergenic |
| GGAGACGGAACAGGATCAAA+AGG | 0.469993 | 7_1:+70294784 | None:intergenic |
| AGGTTCAGAAAGCTACTTCA+TGG | 0.476454 | 7_1:-70294564 | Msa1034710:CDS |
| AACAAACCCTTTGGCGATTG+TGG | 0.479682 | 7_1:-70294818 | Msa1034710:CDS |
| GTCGGTGGATAGAGTGAAGA+AGG | 0.481158 | 7_1:-70294692 | Msa1034710:CDS |
| GAGATGACGAACGGTGGCTA+TGG | 0.485036 | 7_1:+70295031 | None:intergenic |
| AGAGAAAAGAGCAAGAGCCT+TGG | 0.496303 | 7_1:-70292637 | Msa1034710:CDS |
| GATGGAAGAAACAAACCCTT+TGG | 0.499116 | 7_1:-70294827 | Msa1034710:CDS |
| GGTGGAGGAGGTGGAAGTCG+AGG | 0.504511 | 7_1:+70295072 | None:intergenic |
| CTGCTAGTAGGAGACGGAAC+AGG | 0.505373 | 7_1:+70294775 | None:intergenic |
| GCTAATCTTATGAGAGCAGT+TGG | 0.511217 | 7_1:-70292510 | Msa1034710:CDS |
| ATTAGTTAAAGAGTGCAAGA+TGG | 0.512460 | 7_1:-70292385 | Msa1034710:three_prime_UTR |
| TAGAGAAGAGGATCATATGA+TGG | 0.513673 | 7_1:-70294845 | Msa1034710:CDS |
| AAGTTGCTAAAATTAACAAC+AGG | 0.513840 | 7_1:-70294630 | Msa1034710:CDS |
| ACAATAACAATAACAATTTG+AGG | 0.516591 | 7_1:-70294873 | Msa1034710:CDS |
| ATTGTGGTTGTTACACACTT+TGG | 0.523249 | 7_1:-70292194 | Msa1034710:three_prime_UTR |
| TTCACTATCTGTGCTAGCCA+TGG | 0.524133 | 7_1:+70295005 | None:intergenic |
| CCGTTCGTCATCTCTATCCA+TGG | 0.526877 | 7_1:-70295022 | Msa1034710:CDS |
| AGAGATGATGCTGTCATCAA+TGG | 0.530421 | 7_1:-70294601 | Msa1034710:CDS |
| TGGCCGCCGCGGTTTGTTGG+TGG | 0.533581 | 7_1:+70295051 | None:intergenic |
| GGAACAGTTTGTTGTGGTGT+GGG | 0.534887 | 7_1:+70292095 | None:intergenic |
| TGAGGTTTAGTGAATGGAAA+TGG | 0.535185 | 7_1:+70295293 | None:intergenic |
| GGACCACAGAGAAATGGAAA+AGG | 0.536371 | 7_1:+70295328 | None:intergenic |
| ATTAGCAATCTCAAGAACTC+TGG | 0.548796 | 7_1:+70292527 | None:intergenic |
| TCCTACTAGCAGAAGAACTA+CGG | 0.555436 | 7_1:-70294764 | Msa1034710:CDS |
| TGTTGCAACTTTGCAAGTGA+CGG | 0.557497 | 7_1:+70292122 | None:intergenic |
| TTTGAGGAGGATTAGAGAAG+AGG | 0.558611 | 7_1:-70294857 | Msa1034710:CDS |
| TTATCTACCACAATCGCCAA+AGG | 0.563144 | 7_1:+70294811 | None:intergenic |
| TTCATCTGATATATGGCTGG+TGG | 0.565413 | 7_1:+70295149 | None:intergenic |
| TACAATCTCAATAGTACGGA+AGG | 0.566771 | 7_1:+70295200 | None:intergenic |
| GTCGAGGTGGTGTTAAAGCA+TGG | 0.566949 | 7_1:+70295088 | None:intergenic |
| TTAGCTGTTTCATGTTCATG+AGG | 0.567830 | 7_1:+70294907 | None:intergenic |
| AGGAACAGTTTGTTGTGGTG+TGG | 0.567968 | 7_1:+70292094 | None:intergenic |
| GCCGTAGTTCTTCTGCTAGT+AGG | 0.572201 | 7_1:+70294763 | None:intergenic |
| TATCTACCACAATCGCCAAA+GGG | 0.572915 | 7_1:+70294812 | None:intergenic |
| AGCAGAAGAACTACGGCTGG+TGG | 0.576648 | 7_1:-70294757 | Msa1034710:CDS |
| TGTGTACAATCTCAATAGTA+CGG | 0.579651 | 7_1:+70295196 | None:intergenic |
| ACTAGCAGAAGAACTACGGC+TGG | 0.586567 | 7_1:-70294760 | Msa1034710:CDS |
| GGAGGAGGTGGAAGTCGAGG+TGG | 0.587365 | 7_1:+70295075 | None:intergenic |
| CTCGAAGAAAAGCCGAAGAG+AGG | 0.591953 | 7_1:-70292587 | Msa1034710:CDS |
| ATGATGCTGTCATCAATGGA+TGG | 0.593521 | 7_1:-70294597 | Msa1034710:CDS |
| CCATTAGGAACAGTTTGTTG+TGG | 0.604724 | 7_1:+70292089 | None:intergenic |
| GCTTAATTATTTGATCATTG+TGG | 0.610985 | 7_1:-70292210 | Msa1034710:three_prime_UTR |
| AGTACTCGTTCAAGTGGTCA+AGG | 0.616828 | 7_1:-70294733 | Msa1034710:CDS |
| AACGGTGGCTATGGCCGCCG+CGG | 0.623345 | 7_1:+70295040 | None:intergenic |
| GAGACGGAACAGGATCAAAA+GGG | 0.628833 | 7_1:+70294785 | None:intergenic |
| GGTGGAAGTACTCGTTCAAG+TGG | 0.633101 | 7_1:-70294739 | Msa1034710:CDS |
| AATAGATTAGTGTTTGAATG+TGG | 0.637549 | 7_1:-70292260 | Msa1034710:three_prime_UTR |
| GTTCTTCTGCTAGTAGGAGA+CGG | 0.637966 | 7_1:+70294769 | None:intergenic |
| TGATGCTGTCATCAATGGAT+GGG | 0.638726 | 7_1:-70294596 | Msa1034710:CDS |
| ATAACAATAACAATTTGAGG+AGG | 0.648714 | 7_1:-70294870 | Msa1034710:CDS |
| AGAGAGGAAAGCATCAGCAG+AGG | 0.652381 | 7_1:-70292571 | Msa1034710:CDS |
| TTGATGCAAAGATATCAGCT+TGG | 0.653643 | 7_1:-70294663 | Msa1034710:CDS |
| TGTTATGAAAGACCAAAGTG+AGG | 0.663576 | 7_1:+70295229 | None:intergenic |
| TGGTAGTGAAGAACATGTGT+CGG | 0.675585 | 7_1:-70294710 | Msa1034710:CDS |
| GGTGAGTGTACTAAGTGGTG+TGG | 0.683723 | 7_1:-70292239 | Msa1034710:three_prime_UTR |
| TAGTGAAGAACATGTGTCGG+TGG | 0.696232 | 7_1:-70294707 | Msa1034710:CDS |
| CCTCCACCACCAACAAACCG+CGG | 0.696619 | 7_1:-70295057 | Msa1034710:CDS |
| TTCATGGATGAAGAAAGTTG+AGG | 0.696748 | 7_1:-70294548 | Msa1034710:intron |
| CCATGGATAGAGATGACGAA+CGG | 0.697357 | 7_1:+70295022 | None:intergenic |
| TGGATAGAGATGACGAACGG+TGG | 0.707481 | 7_1:+70295025 | None:intergenic |
| ACTCGTTCAAGTGGTCAAGG+TGG | 0.708848 | 7_1:-70294730 | Msa1034710:CDS |
| AATGTGGTGAGTGTACTAAG+TGG | 0.741668 | 7_1:-70292244 | Msa1034710:three_prime_UTR |
| CCACCACCAACAAACCGCGG+CGG | 0.750976 | 7_1:-70295054 | Msa1034710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTTATTATTCTTGAA+TGG | - | chr7_1:70293146-70293165 | Msa1034710:intron | 10.0% |
| !! | TAGAATTTATTGAATAATAA+AGG | + | chr7_1:70293290-70293309 | None:intergenic | 10.0% |
| !! | AGTATATTATATATAATCAA+TGG | + | chr7_1:70293806-70293825 | None:intergenic | 10.0% |
| !!! | TTAATATTGAAAACTTTTTT+AGG | - | chr7_1:70294952-70294971 | Msa1034710:CDS | 10.0% |
| !! | TTACTTTAATTAATATTTCT+TGG | - | chr7_1:70295235-70295254 | Msa1034710:five_prime_UTR | 10.0% |
| !! | ATGAAAACTAAAAATAAAGT+AGG | - | chr7_1:70293001-70293020 | Msa1034710:intron | 15.0% |
| !! | TATATTAACACTAAGATAAA+AGG | - | chr7_1:70293183-70293202 | Msa1034710:intron | 15.0% |
| !! | TTAAAAGGTAAATTCTAATT+GGG | + | chr7_1:70293512-70293531 | None:intergenic | 15.0% |
| !! | TTTAAAAGGTAAATTCTAAT+TGG | + | chr7_1:70293513-70293532 | None:intergenic | 15.0% |
| !!! | AATTAGAATTTACCTTTTAA+AGG | - | chr7_1:70293512-70293531 | Msa1034710:intron | 15.0% |
| !!! | ATTAGAATTTACCTTTTAAA+GGG | - | chr7_1:70293513-70293532 | Msa1034710:intron | 15.0% |
| !! | AATATATGGGAAAAAAAATT+GGG | + | chr7_1:70293774-70293793 | None:intergenic | 15.0% |
| !! | TAATATATGGGAAAAAAAAT+TGG | + | chr7_1:70293775-70293794 | None:intergenic | 15.0% |
| !!! | AAAAAAGTAATATCAAGTTT+TGG | - | chr7_1:70294178-70294197 | Msa1034710:intron | 15.0% |
| !! | AAACAAGTAATTAATTTCAA+AGG | + | chr7_1:70294299-70294318 | None:intergenic | 15.0% |
| !! | TATATAAAAATAGCATGATA+AGG | - | chr7_1:70295045-70295064 | Msa1034710:CDS | 15.0% |
| !! | ACAATAACAATAACAATTTG+AGG | - | chr7_1:70292520-70292539 | Msa1034710:CDS | 20.0% |
| !!! | GGTGAAAAATTATTTTCTAA+TGG | - | chr7_1:70293204-70293223 | Msa1034710:intron | 20.0% |
| !! | AAATACAACAGAGATATAAA+GGG | + | chr7_1:70293334-70293353 | None:intergenic | 20.0% |
| !!! | GATTTGATTGTAATTTGTAA+TGG | + | chr7_1:70293477-70293496 | None:intergenic | 20.0% |
| !! | TAAAAGGTAAATTCTAATTG+GGG | + | chr7_1:70293511-70293530 | None:intergenic | 20.0% |
| !!! | AGACAAATTTTAGTTTGTTA+AGG | - | chr7_1:70293661-70293680 | Msa1034710:intron | 20.0% |
| !!! | GACAAATTTTAGTTTGTTAA+GGG | - | chr7_1:70293662-70293681 | Msa1034710:intron | 20.0% |
| !! | ATGGTTTAAGTCTAATATAT+GGG | + | chr7_1:70293787-70293806 | None:intergenic | 20.0% |
| !! | AATGGTTTAAGTCTAATATA+TGG | + | chr7_1:70293788-70293807 | None:intergenic | 20.0% |
| !! | TATATATGTTAGTGTGTTTA+GGG | + | chr7_1:70294088-70294107 | None:intergenic | 20.0% |
| !! | ATATATATGTTAGTGTGTTT+AGG | + | chr7_1:70294089-70294108 | None:intergenic | 20.0% |
| !! | TGGATATGTTAGATTATTAT+CGG | - | chr7_1:70294257-70294276 | Msa1034710:intron | 20.0% |
| !! | AAATGAACAATTCACTTTAT+AGG | + | chr7_1:70294325-70294344 | None:intergenic | 20.0% |
| !! | GTAAAATTAATAAATGATCG+TGG | + | chr7_1:70294362-70294381 | None:intergenic | 20.0% |
| !!! | AACTTAGAAGAAAGATTTTT+TGG | + | chr7_1:70294920-70294939 | None:intergenic | 20.0% |
| !! | CACTCTTTAACTAATTAAAA+AGG | + | chr7_1:70295003-70295022 | None:intergenic | 20.0% |
| !! | TATACTTAATGAAAACCAAT+TGG | - | chr7_1:70295094-70295113 | Msa1034710:CDS | 20.0% |
| !! | CTAAAATATGAATGAGATAA+TGG | - | chr7_1:70295348-70295367 | Msa1034710:five_prime_UTR | 20.0% |
| ! | ATAACAATAACAATTTGAGG+AGG | - | chr7_1:70292523-70292542 | Msa1034710:CDS | 25.0% |
| ! | AAGTTGCTAAAATTAACAAC+AGG | - | chr7_1:70292763-70292782 | Msa1034710:intron | 25.0% |
| ! | TAATAATTAGTAGGCTGATT+AGG | - | chr7_1:70292956-70292975 | Msa1034710:intron | 25.0% |
| !!! | TGTATTGATTAGTTCAAAGT+TGG | + | chr7_1:70293042-70293061 | None:intergenic | 25.0% |
| ! | AACTAATCAATACATGACAA+AGG | - | chr7_1:70293048-70293067 | Msa1034710:intron | 25.0% |
| ! | CAAATACAACAGAGATATAA+AGG | + | chr7_1:70293335-70293354 | None:intergenic | 25.0% |
| !! | TGTAATTTGTAATGGCTAAT+TGG | + | chr7_1:70293469-70293488 | None:intergenic | 25.0% |
| ! | GAAAAAAAATGCTAGTAATG+AGG | + | chr7_1:70293566-70293585 | None:intergenic | 25.0% |
| ! | CAACTAACACATCTATAAAA+TGG | - | chr7_1:70294002-70294021 | Msa1034710:intron | 25.0% |
| ! | AAATTTCAAAGAAATGGCTT+AGG | + | chr7_1:70294033-70294052 | None:intergenic | 25.0% |
| ! | TGGCTAAAATTTCAAAGAAA+TGG | + | chr7_1:70294039-70294058 | None:intergenic | 25.0% |
| ! | ATATATGTTAGTGTGTTTAG+GGG | + | chr7_1:70294087-70294106 | None:intergenic | 25.0% |
| !!! | CTTTTTTTAGACAAACGTTA+GGG | + | chr7_1:70294165-70294184 | None:intergenic | 25.0% |
| !!! | ACTTTTTTTAGACAAACGTT+AGG | + | chr7_1:70294166-70294185 | None:intergenic | 25.0% |
| !!! | AACATATCCATGATTTGTTA+TGG | + | chr7_1:70294247-70294266 | None:intergenic | 25.0% |
| ! | CAATAATTAGACAATAATGC+AGG | + | chr7_1:70294498-70294517 | None:intergenic | 25.0% |
| ! | TTGTTAAACAAAATGCTAGA+TGG | + | chr7_1:70294576-70294595 | None:intergenic | 25.0% |
| ! | AATTTGAGTATTTAACGTAG+AGG | + | chr7_1:70294604-70294623 | None:intergenic | 25.0% |
| !!! | AATGCTTTGTTTTACTACAA+TGG | + | chr7_1:70294644-70294663 | None:intergenic | 25.0% |
| !!! | CATGACATGTGATTTTTTTT+GGG | + | chr7_1:70294722-70294741 | None:intergenic | 25.0% |
| !!! | CTTTTTTAGGCACAAAAAAA+AGG | - | chr7_1:70294965-70294984 | Msa1034710:CDS | 25.0% |
| ! | AATAGATTAGTGTTTGAATG+TGG | - | chr7_1:70295133-70295152 | Msa1034710:CDS | 25.0% |
| ! | GCTTAATTATTTGATCATTG+TGG | - | chr7_1:70295183-70295202 | Msa1034710:exon | 25.0% |
| ! | TTTAGAGAAAATTCAGAAGT+AGG | + | chr7_1:70295333-70295352 | None:intergenic | 25.0% |
| ! | TTTTGATGAGGTTTAGTGAA+TGG | + | chr7_1:70292109-70292128 | None:intergenic | 30.0% |
| !!! | ATAGTGTGTGTATTTTGATG+AGG | + | chr7_1:70292121-70292140 | None:intergenic | 30.0% |
| TGAATGAAATTTCCTCACTT+TGG | - | chr7_1:70292152-70292171 | Msa1034710:three_prime_UTR | 30.0% | |
| TGTGTACAATCTCAATAGTA+CGG | + | chr7_1:70292200-70292219 | None:intergenic | 30.0% | |
| !! | CTTGGTTTTCATCTGATATA+TGG | + | chr7_1:70292254-70292273 | None:intergenic | 30.0% |
| ! | CTGTTATTTGTTCATCTTCT+TGG | + | chr7_1:70292272-70292291 | None:intergenic | 30.0% |
| CAGCATGAAATACATAACAA+CGG | + | chr7_1:70292933-70292952 | None:intergenic | 30.0% | |
| TTGTTATGTATTTCATGCTG+TGG | - | chr7_1:70292933-70292952 | Msa1034710:intron | 30.0% | |
| ATGCTGTGGTAATAATTAGT+AGG | - | chr7_1:70292947-70292966 | Msa1034710:intron | 30.0% | |
| TGATTTAGACGTTAAACCTT+TGG | + | chr7_1:70293400-70293419 | None:intergenic | 30.0% | |
| AAAATGATGTTAAGCCAACA+CGG | - | chr7_1:70293434-70293453 | Msa1034710:intron | 30.0% | |
| GTATTTCATGTTTCCTTACT+CGG | - | chr7_1:70293906-70293925 | Msa1034710:intron | 30.0% | |
| TTATAGATGTGTTAGTTGCA+TGG | + | chr7_1:70294000-70294019 | None:intergenic | 30.0% | |
| !!! | AATATCAAGTTTTGGTGTTG+AGG | - | chr7_1:70294186-70294205 | Msa1034710:intron | 30.0% |
| !! | CATGATTTGTTATGGACTTA+TGG | + | chr7_1:70294239-70294258 | None:intergenic | 30.0% |
| CATAAGTCCATAACAAATCA+TGG | - | chr7_1:70294237-70294256 | Msa1034710:intron | 30.0% | |
| ! | TTTTCCAATGACAGCAAAAA+GGG | - | chr7_1:70294532-70294551 | Msa1034710:intron | 30.0% |
| !!! | GCATGACATGTGATTTTTTT+TGG | + | chr7_1:70294723-70294742 | None:intergenic | 30.0% |
| !!! | TAGAAGAAAGATTTTTTGGC+AGG | + | chr7_1:70294916-70294935 | None:intergenic | 30.0% |
| ! | ATTAGTTAAAGAGTGCAAGA+TGG | - | chr7_1:70295008-70295027 | Msa1034710:CDS | 30.0% |
| TCACTTATAAACACTCCAAT+TGG | + | chr7_1:70295112-70295131 | None:intergenic | 30.0% | |
| TGAGGTTTAGTGAATGGAAA+TGG | + | chr7_1:70292103-70292122 | None:intergenic | 35.0% | |
| TGTTATGAAAGACCAAAGTG+AGG | + | chr7_1:70292167-70292186 | None:intergenic | 35.0% | |
| TACAATCTCAATAGTACGGA+AGG | + | chr7_1:70292196-70292215 | None:intergenic | 35.0% | |
| ! | GTTTTCATCTGATATATGGC+TGG | + | chr7_1:70292250-70292269 | None:intergenic | 35.0% |
| CATGAGGACTTATGTTGTTA+GGG | + | chr7_1:70292473-70292492 | None:intergenic | 35.0% | |
| TCATGAGGACTTATGTTGTT+AGG | + | chr7_1:70292474-70292493 | None:intergenic | 35.0% | |
| ! | TTAGCTGTTTCATGTTCATG+AGG | + | chr7_1:70292489-70292508 | None:intergenic | 35.0% |
| TAGAGAAGAGGATCATATGA+TGG | - | chr7_1:70292548-70292567 | Msa1034710:CDS | 35.0% | |
| TTGATGCAAAGATATCAGCT+TGG | - | chr7_1:70292730-70292749 | Msa1034710:intron | 35.0% | |
| TTCATGGATGAAGAAAGTTG+AGG | - | chr7_1:70292845-70292864 | Msa1034710:intron | 35.0% | |
| ! | TCACGATGTTATTTGCATGT+AGG | - | chr7_1:70292894-70292913 | Msa1034710:intron | 35.0% |
| TGGTTGTTGAGTAACCTAAT+TGG | - | chr7_1:70293224-70293243 | Msa1034710:intron | 35.0% | |
| GGTTGTTGAGTAACCTAATT+GGG | - | chr7_1:70293225-70293244 | Msa1034710:intron | 35.0% | |
| GTTGTTGAGTAACCTAATTG+GGG | - | chr7_1:70293226-70293245 | Msa1034710:intron | 35.0% | |
| TGTATTTGCATTGCATGCAT+TGG | - | chr7_1:70293347-70293366 | Msa1034710:intron | 35.0% | |
| GTACTATGTTATCAAGCTCT+AGG | + | chr7_1:70293378-70293397 | None:intergenic | 35.0% | |
| ! | GCTTGATAACATAGTACCAA+AGG | - | chr7_1:70293381-70293400 | Msa1034710:intron | 35.0% |
| AAATGATGTTAAGCCAACAC+GGG | - | chr7_1:70293435-70293454 | Msa1034710:intron | 35.0% | |
| CCTACACAATTCCCTTTAAA+AGG | + | chr7_1:70293527-70293546 | None:intergenic | 35.0% | |
| !! | CCTTTTAAAGGGAATTGTGT+AGG | - | chr7_1:70293524-70293543 | Msa1034710:intron | 35.0% |
| TTTAAAGGGAATTGTGTAGG+AGG | - | chr7_1:70293527-70293546 | Msa1034710:intron | 35.0% | |
| !! | TAGAAGGGTGCTTACATATA+GGG | + | chr7_1:70293837-70293856 | None:intergenic | 35.0% |
| !! | ATAGAAGGGTGCTTACATAT+AGG | + | chr7_1:70293838-70293857 | None:intergenic | 35.0% |
| ACTCTTTGCCTCTAATAGAA+GGG | + | chr7_1:70293852-70293871 | None:intergenic | 35.0% | |
| !! | GCAAAGAGTGCTTACATATA+GGG | - | chr7_1:70293863-70293882 | Msa1034710:intron | 35.0% |
| ! | AATCCTCTTTTGCATTGCAT+TGG | - | chr7_1:70294399-70294418 | Msa1034710:intron | 35.0% |
| TTTCCAATGCAATGCAAAAG+AGG | + | chr7_1:70294405-70294424 | None:intergenic | 35.0% | |
| ! | CTTTTCCAATGACAGCAAAA+AGG | - | chr7_1:70294531-70294550 | Msa1034710:intron | 35.0% |
| TTTCCAATGACAGCAAAAAG+GGG | - | chr7_1:70294533-70294552 | Msa1034710:intron | 35.0% | |
| TAGATGGTGAGAAACATGTT+TGG | + | chr7_1:70294560-70294579 | None:intergenic | 35.0% | |
| !! | CAAAGCATTGACTAACAACT+CGG | - | chr7_1:70294655-70294674 | Msa1034710:CDS | 35.0% |
| !! | AAAGCATTGACTAACAACTC+GGG | - | chr7_1:70294656-70294675 | Msa1034710:CDS | 35.0% |
| ATTAGCAATCTCAAGAACTC+TGG | + | chr7_1:70294869-70294888 | None:intergenic | 35.0% | |
| !!! | AAGAAAGATTTTTTGGCAGG+AGG | + | chr7_1:70294913-70294932 | None:intergenic | 35.0% |
| ATTGTGGTTGTTACACACTT+TGG | - | chr7_1:70295199-70295218 | Msa1034710:five_prime_UTR | 35.0% | |
| TTCAGAAGTAGGTAACCATT+AGG | + | chr7_1:70295322-70295341 | None:intergenic | 35.0% | |
| ! | TCTCCTTTTCCATTTCTCTG+TGG | - | chr7_1:70292062-70292081 | Msa1034710:three_prime_UTR | 40.0% |
| TGGAAATGGTGAGAAGAGTT+TGG | + | chr7_1:70292089-70292108 | None:intergenic | 40.0% | |
| TTCATCTGATATATGGCTGG+TGG | + | chr7_1:70292247-70292266 | None:intergenic | 40.0% | |
| TTCAATGCTCTTGTTCTAGC+AGG | - | chr7_1:70292435-70292454 | Msa1034710:three_prime_UTR | 40.0% | |
| TTTGAGGAGGATTAGAGAAG+AGG | - | chr7_1:70292536-70292555 | Msa1034710:CDS | 40.0% | |
| GATGGAAGAAACAAACCCTT+TGG | - | chr7_1:70292566-70292585 | Msa1034710:CDS | 40.0% | |
| TATCTACCACAATCGCCAAA+GGG | + | chr7_1:70292584-70292603 | None:intergenic | 40.0% | |
| TTATCTACCACAATCGCCAA+AGG | + | chr7_1:70292585-70292604 | None:intergenic | 40.0% | |
| TCCTACTAGCAGAAGAACTA+CGG | - | chr7_1:70292629-70292648 | Msa1034710:CDS | 40.0% | |
| ! | TGGTAGTGAAGAACATGTGT+CGG | - | chr7_1:70292683-70292702 | Msa1034710:intron | 40.0% |
| AGAGATGATGCTGTCATCAA+TGG | - | chr7_1:70292792-70292811 | Msa1034710:intron | 40.0% | |
| ATGATGCTGTCATCAATGGA+TGG | - | chr7_1:70292796-70292815 | Msa1034710:intron | 40.0% | |
| TGATGCTGTCATCAATGGAT+GGG | - | chr7_1:70292797-70292816 | Msa1034710:intron | 40.0% | |
| AGGTTCAGAAAGCTACTTCA+TGG | - | chr7_1:70292829-70292848 | Msa1034710:intron | 40.0% | |
| AGATTGCCTAGCTTGAGTTA+CGG | - | chr7_1:70293104-70293123 | Msa1034710:intron | 40.0% | |
| TAACCTAATTGGGGTGTGTA+GGG | - | chr7_1:70293235-70293254 | Msa1034710:intron | 40.0% | |
| ! | AGACTTACTAGCTAGTTTCC+TGG | + | chr7_1:70293262-70293281 | None:intergenic | 40.0% |
| AGTCACACTCATCATACAGT+GGG | + | chr7_1:70293731-70293750 | None:intergenic | 40.0% | |
| TAGTCACACTCATCATACAG+TGG | + | chr7_1:70293732-70293751 | None:intergenic | 40.0% | |
| TGTAAGCACCCTTCTATTAG+AGG | - | chr7_1:70293841-70293860 | Msa1034710:intron | 40.0% | |
| CACTCTTTGCCTCTAATAGA+AGG | + | chr7_1:70293853-70293872 | None:intergenic | 40.0% | |
| !! | GGCAAAGAGTGCTTACATAT+AGG | - | chr7_1:70293862-70293881 | Msa1034710:intron | 40.0% |
| ! | AGAGTGCTTACATATAGGGA+CGG | - | chr7_1:70293867-70293886 | Msa1034710:intron | 40.0% |
| ! | TCAGACTTTTGATGTCGATG+TGG | + | chr7_1:70294059-70294078 | None:intergenic | 40.0% |
| AAGCCAATAACCTCATTACG+TGG | - | chr7_1:70294436-70294455 | Msa1034710:intron | 40.0% | |
| ACAACAGACTCCTATAGCTT+TGG | - | chr7_1:70294472-70294491 | Msa1034710:intron | 40.0% | |
| ATAATGCAGGCCAAAGCTAT+AGG | + | chr7_1:70294485-70294504 | None:intergenic | 40.0% | |
| !!! | TTTGTTTTGCGTCTTCTCCA+AGG | + | chr7_1:70294776-70294795 | None:intergenic | 40.0% |
| GGCAAAAAGAGGAACTAAAG+TGG | - | chr7_1:70294843-70294862 | Msa1034710:CDS | 40.0% | |
| GCTAATCTTATGAGAGCAGT+TGG | - | chr7_1:70294883-70294902 | Msa1034710:CDS | 40.0% | |
| AATGTGGTGAGTGTACTAAG+TGG | - | chr7_1:70295149-70295168 | Msa1034710:CDS | 40.0% | |
| TGTTGCAACTTTGCAAGTGA+CGG | + | chr7_1:70295274-70295293 | None:intergenic | 40.0% | |
| !! | CCATTAGGAACAGTTTGTTG+TGG | + | chr7_1:70295307-70295326 | None:intergenic | 40.0% |
| CCACAACAAACTGTTCCTAA+TGG | - | chr7_1:70295304-70295323 | Msa1034710:five_prime_UTR | 40.0% | |
| GGACCACAGAGAAATGGAAA+AGG | + | chr7_1:70292068-70292087 | None:intergenic | 45.0% | |
| GAGTTTGGACCACAGAGAAA+TGG | + | chr7_1:70292074-70292093 | None:intergenic | 45.0% | |
| CCATGGATAGAGATGACGAA+CGG | + | chr7_1:70292374-70292393 | None:intergenic | 45.0% | |
| TTCACTATCTGTGCTAGCCA+TGG | + | chr7_1:70292391-70292410 | None:intergenic | 45.0% | |
| AACAAACCCTTTGGCGATTG+TGG | - | chr7_1:70292575-70292594 | Msa1034710:CDS | 45.0% | |
| GAGACGGAACAGGATCAAAA+GGG | + | chr7_1:70292611-70292630 | None:intergenic | 45.0% | |
| GTTCTTCTGCTAGTAGGAGA+CGG | + | chr7_1:70292627-70292646 | None:intergenic | 45.0% | |
| AGTACTCGTTCAAGTGGTCA+AGG | - | chr7_1:70292660-70292679 | Msa1034710:intron | 45.0% | |
| TAGTGAAGAACATGTGTCGG+TGG | - | chr7_1:70292686-70292705 | Msa1034710:intron | 45.0% | |
| TTACCACCGTAACTCAAGCT+AGG | + | chr7_1:70293113-70293132 | None:intergenic | 45.0% | |
| GTAACCTAATTGGGGTGTGT+AGG | - | chr7_1:70293234-70293253 | Msa1034710:intron | 45.0% | |
| AACCTAATTGGGGTGTGTAG+GGG | - | chr7_1:70293236-70293255 | Msa1034710:intron | 45.0% | |
| ATTGGCTATGTTTCCCGTGT+TGG | + | chr7_1:70293451-70293470 | None:intergenic | 45.0% | |
| AGGGAATTGTGTAGGAGGTT+TGG | - | chr7_1:70293532-70293551 | Msa1034710:intron | 45.0% | |
| GGGAATTGTGTAGGAGGTTT+GGG | - | chr7_1:70293533-70293552 | Msa1034710:intron | 45.0% | |
| TCCATTCTCTAACACACCGT+AGG | - | chr7_1:70293699-70293718 | Msa1034710:intron | 45.0% | |
| CCATTCTCTAACACACCGTA+GGG | - | chr7_1:70293700-70293719 | Msa1034710:intron | 45.0% | |
| TGCTTACATATAGGGACGGA+GGG | + | chr7_1:70293871-70293890 | None:intergenic | 45.0% | |
| ! | AGGGTGCTTACATATAGGGA+CGG | + | chr7_1:70293833-70293852 | None:intergenic | 45.0% |
| TGCTTACATATAGGGACGGA+AGG | - | chr7_1:70293871-70293890 | Msa1034710:intron | 45.0% | |
| ! | TGTTTCCTTACTCGGACTAG+CGG | - | chr7_1:70293914-70293933 | Msa1034710:intron | 45.0% |
| CCACCACGTAATGAGGTTAT+TGG | + | chr7_1:70294442-70294461 | None:intergenic | 45.0% | |
| CCAATAACCTCATTACGTGG+TGG | - | chr7_1:70294439-70294458 | Msa1034710:intron | 45.0% | |
| ATAACCTCATTACGTGGTGG+TGG | - | chr7_1:70294442-70294461 | Msa1034710:intron | 45.0% | |
| AAAACCACCACCACGTAATG+AGG | + | chr7_1:70294449-70294468 | None:intergenic | 45.0% | |
| AGAGAAAAGAGCAAGAGCCT+TGG | - | chr7_1:70294756-70294775 | Msa1034710:CDS | 45.0% | |
| TGCTGATGCTTTCCTCTCTT+CGG | + | chr7_1:70294821-70294840 | None:intergenic | 45.0% | |
| !! | GGAACAGTTTGTTGTGGTGT+GGG | + | chr7_1:70295301-70295320 | None:intergenic | 45.0% |
| !! | AGGAACAGTTTGTTGTGGTG+TGG | + | chr7_1:70295302-70295321 | None:intergenic | 45.0% |
| ! | GTCGAGGTGGTGTTAAAGCA+TGG | + | chr7_1:70292308-70292327 | None:intergenic | 50.0% |
| TGGATAGAGATGACGAACGG+TGG | + | chr7_1:70292371-70292390 | None:intergenic | 50.0% | |
| CCGTTCGTCATCTCTATCCA+TGG | - | chr7_1:70292371-70292390 | Msa1034710:three_prime_UTR | 50.0% | |
| GGAGACGGAACAGGATCAAA+AGG | + | chr7_1:70292612-70292631 | None:intergenic | 50.0% | |
| GCCGTAGTTCTTCTGCTAGT+AGG | + | chr7_1:70292633-70292652 | None:intergenic | 50.0% | |
| ACTAGCAGAAGAACTACGGC+TGG | - | chr7_1:70292633-70292652 | Msa1034710:CDS | 50.0% | |
| !! | GGTGGAAGTACTCGTTCAAG+TGG | - | chr7_1:70292654-70292673 | Msa1034710:intron | 50.0% |
| ACTCGTTCAAGTGGTCAAGG+TGG | - | chr7_1:70292663-70292682 | Msa1034710:intron | 50.0% | |
| GTCGGTGGATAGAGTGAAGA+AGG | - | chr7_1:70292701-70292720 | Msa1034710:intron | 50.0% | |
| CAATGGATGGGAGAGTGAAC+AGG | - | chr7_1:70292809-70292828 | Msa1034710:intron | 50.0% | |
| TTGCCTAGCTTGAGTTACGG+TGG | - | chr7_1:70293107-70293126 | Msa1034710:intron | 50.0% | |
| CCCTACGGTGTGTTAGAGAA+TGG | + | chr7_1:70293703-70293722 | None:intergenic | 50.0% | |
| TCTCTAACACACCGTAGGGA+CGG | - | chr7_1:70293704-70293723 | Msa1034710:intron | 50.0% | |
| GTGCTTACATATAGGGACGG+AGG | + | chr7_1:70293870-70293889 | None:intergenic | 50.0% | |
| ATCAACCGCTAGTCCGAGTA+AGG | + | chr7_1:70293922-70293941 | None:intergenic | 50.0% | |
| !! | TTACTCGGACTAGCGGTTGA+TGG | - | chr7_1:70293921-70293940 | Msa1034710:intron | 50.0% |
| ! | CACGGATTGTTAGAGACGTG+CGG | + | chr7_1:70293959-70293978 | None:intergenic | 50.0% |
| TCTAACAATCCGTGCGTCCT+GGG | - | chr7_1:70293965-70293984 | Msa1034710:intron | 50.0% | |
| TTGCATGGAGAGTTGAACCC+AGG | + | chr7_1:70293985-70294004 | None:intergenic | 50.0% | |
| !! | GGACCCCTTTTTGCTGTCAT+TGG | + | chr7_1:70294539-70294558 | None:intergenic | 50.0% |
| CTCGAAGAAAAGCCGAAGAG+AGG | - | chr7_1:70294806-70294825 | Msa1034710:CDS | 50.0% | |
| !! | AGAGAGGAAAGCATCAGCAG+AGG | - | chr7_1:70294822-70294841 | Msa1034710:CDS | 50.0% |
| GCATCAGCAGAGGCAAAAAG+AGG | - | chr7_1:70294832-70294851 | Msa1034710:CDS | 50.0% | |
| GGTGAGTGTACTAAGTGGTG+TGG | - | chr7_1:70295154-70295173 | Msa1034710:CDS | 50.0% | |
| !! | TTTGTTGGTGGTGGAGGAGG+TGG | + | chr7_1:70292333-70292352 | None:intergenic | 55.0% |
| GAGATGACGAACGGTGGCTA+TGG | + | chr7_1:70292365-70292384 | None:intergenic | 55.0% | |
| CTGCTAGTAGGAGACGGAAC+AGG | + | chr7_1:70292621-70292640 | None:intergenic | 55.0% | |
| AGCAGAAGAACTACGGCTGG+TGG | - | chr7_1:70292636-70292655 | Msa1034710:CDS | 55.0% | |
| ATACAGTGGGTCCGTCCCTA+CGG | + | chr7_1:70293718-70293737 | None:intergenic | 55.0% | |
| CTCTAACAATCCGTGCGTCC+TGG | - | chr7_1:70293964-70293983 | Msa1034710:intron | 55.0% | |
| AGAGTTGAACCCAGGACGCA+CGG | + | chr7_1:70293977-70293996 | None:intergenic | 55.0% | |
| !! | CGGTTTGTTGGTGGTGGAGG+AGG | + | chr7_1:70292336-70292355 | None:intergenic | 60.0% |
| CCTCCACCACCAACAAACCG+CGG | - | chr7_1:70292336-70292355 | Msa1034710:three_prime_UTR | 60.0% | |
| GGCCCCTACACACCCCAATT+AGG | + | chr7_1:70293241-70293260 | None:intergenic | 60.0% | |
| AATTGGGGTGTGTAGGGGCC+AGG | - | chr7_1:70293241-70293260 | Msa1034710:intron | 60.0% | |
| GGAGGAGGTGGAAGTCGAGG+TGG | + | chr7_1:70292321-70292340 | None:intergenic | 65.0% | |
| GGTGGAGGAGGTGGAAGTCG+AGG | + | chr7_1:70292324-70292343 | None:intergenic | 65.0% | |
| !! | CCGCGGTTTGTTGGTGGTGG+AGG | + | chr7_1:70292339-70292358 | None:intergenic | 65.0% |
| CCACCACCAACAAACCGCGG+CGG | - | chr7_1:70292339-70292358 | Msa1034710:three_prime_UTR | 65.0% | |
| CTATGGCCGCCGCGGTTTGT+TGG | + | chr7_1:70292348-70292367 | None:intergenic | 65.0% | |
| !! | CCGCCGCGGTTTGTTGGTGG+TGG | + | chr7_1:70292342-70292361 | None:intergenic | 70.0% |
| !! | TGGCCGCCGCGGTTTGTTGG+TGG | + | chr7_1:70292345-70292364 | None:intergenic | 70.0% |
| AACGGTGGCTATGGCCGCCG+CGG | + | chr7_1:70292356-70292375 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 70292031 | 70295384 | 70292031 | ID=Msa1034710;Name=Msa1034710 |
| chr7_1 | mRNA | 70292031 | 70295384 | 70292031 | ID=Msa1034710-mRNA-1;Parent=Msa1034710;Name=Msa1034710-mRNA-1;_AED=0.01;_eAED=0.01;_QI=188|1|1|1|1|1|2|448|279 |
| chr7_1 | exon | 70292031 | 70292670 | 70292031 | ID=Msa1034710-mRNA-1:exon:16806;Parent=Msa1034710-mRNA-1 |
| chr7_1 | exon | 70294549 | 70295384 | 70294549 | ID=Msa1034710-mRNA-1:exon:16805;Parent=Msa1034710-mRNA-1 |
| chr7_1 | five_prime_UTR | 70295197 | 70295384 | 70295197 | ID=Msa1034710-mRNA-1:five_prime_utr;Parent=Msa1034710-mRNA-1 |
| chr7_1 | CDS | 70294549 | 70295196 | 70294549 | ID=Msa1034710-mRNA-1:cds;Parent=Msa1034710-mRNA-1 |
| chr7_1 | CDS | 70292479 | 70292670 | 70292479 | ID=Msa1034710-mRNA-1:cds;Parent=Msa1034710-mRNA-1 |
| chr7_1 | three_prime_UTR | 70292031 | 70292478 | 70292031 | ID=Msa1034710-mRNA-1:three_prime_utr;Parent=Msa1034710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
